NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|517758762|ref|WP_018928970|]
View 

pyridoxal-phosphate dependent enzyme [Pseudomonas umsongensis]

Protein Classification

PALP domain-containing protein( domain architecture ID 751)

PALP domain-containing protein belonging to the tryptophan synthase beta superfamily (fold type II) that consists of pyridoxal phosphate (PLP)-dependent enzymes that catalyze beta-replacement and beta-elimination reactions

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
Trp-synth-beta_II super family cl00342
Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP) ...
6-300 5.02e-85

Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehyd catalyzes the conversion of L- or D-serine to pyruvate and ammonia. Thr-dehyd is active as a homodimer and catalyzes the conversion of L-threonine to 2-oxobutanoate and ammonia. DAL is also a homodimer and catalyzes the alpha, beta-elimination reaction of both L- and D-alpha, beta-diaminopropionate to form pyruvate and ammonia. Thr-synth catalyzes the formation of threonine and inorganic phosphate from O-phosphohomoserine.


The actual alignment was detected with superfamily member cd06448:

Pssm-ID: 444852  Cd Length: 316  Bit Score: 258.38  E-value: 5.02e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   6 TPLILHPGLSTPT-RRIWLKLENLQPSGSFKLRGMGLLCSQAAEQGKRK---VVCPSGGNAGLATAVAAANLGLKACIVV 81
Cdd:cd06448    2 TPLIESTALSKTAgCNVFLKLENLQPSGSFKIRGIGHLCQKSAKQGLNEcvhVVCSSGGNAGLAAAYAARKLGVPCTIVV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  82 PNTTPETTRARIRKTGAEVIVHGKVW-DEANQRAKELAKG-ADTEYVPAFDHPVLWEGHSTMVDEI---LEDCPQVDALV 156
Cdd:cd06448   82 PESTKPRVVEKLRDEGATVVVHGKVWwEADNYLREELAENdPGPVYVHPFDDPLIWEGHSSMVDEIaqqLQSQEKVDAIV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 157 TSVGGGGLLAGLLTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQVAAWPVQHILDFPHECV 236
Cdd:cd06448  162 CSVGGGGLLNGIVQGLERNGWGDIPVVAVETEGAHSLNASLKAGKLVTLPKITSVATSLGAKTVSSQALEYAQEHNIKSE 241
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 517758762 237 VLSDDEAIMGVVRYANDLRQLVEPACGVSLAIAYldHPAI----AEAHD-----VVIVVCGGVSISAQLVAGW 300
Cdd:cd06448  242 VVSDRDAVQACLRFADDERILVEPACGAALAVVY--SGKIldlqLEVLLtpldnVVVVVCGGSNITLEQLKEY 312
 
Name Accession Description Interval E-value
L-Ser-dehyd cd06448
Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the ...
6-300 5.02e-85

Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.


Pssm-ID: 107209  Cd Length: 316  Bit Score: 258.38  E-value: 5.02e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   6 TPLILHPGLSTPT-RRIWLKLENLQPSGSFKLRGMGLLCSQAAEQGKRK---VVCPSGGNAGLATAVAAANLGLKACIVV 81
Cdd:cd06448    2 TPLIESTALSKTAgCNVFLKLENLQPSGSFKIRGIGHLCQKSAKQGLNEcvhVVCSSGGNAGLAAAYAARKLGVPCTIVV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  82 PNTTPETTRARIRKTGAEVIVHGKVW-DEANQRAKELAKG-ADTEYVPAFDHPVLWEGHSTMVDEI---LEDCPQVDALV 156
Cdd:cd06448   82 PESTKPRVVEKLRDEGATVVVHGKVWwEADNYLREELAENdPGPVYVHPFDDPLIWEGHSSMVDEIaqqLQSQEKVDAIV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 157 TSVGGGGLLAGLLTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQVAAWPVQHILDFPHECV 236
Cdd:cd06448  162 CSVGGGGLLNGIVQGLERNGWGDIPVVAVETEGAHSLNASLKAGKLVTLPKITSVATSLGAKTVSSQALEYAQEHNIKSE 241
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 517758762 237 VLSDDEAIMGVVRYANDLRQLVEPACGVSLAIAYldHPAI----AEAHD-----VVIVVCGGVSISAQLVAGW 300
Cdd:cd06448  242 VVSDRDAVQACLRFADDERILVEPACGAALAVVY--SGKIldlqLEVLLtpldnVVVVVCGGSNITLEQLKEY 312
IlvA COG1171
Threonine deaminase [Amino acid transport and metabolism]; Threonine deaminase is part of the ...
4-289 1.17e-56

Threonine deaminase [Amino acid transport and metabolism]; Threonine deaminase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis


Pssm-ID: 440784 [Multi-domain]  Cd Length: 327  Bit Score: 186.01  E-value: 1.17e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   4 IRTPLILHPGLSTPT-RRIWLKLENLQPSGSFKLRG-MGLLCSQAAEQGKRKVVCPSGGN----------Aglatavaaa 71
Cdd:COG1171   23 RRTPLLRSPTLSERLgAEVYLKLENLQPTGSFKLRGaYNALASLSEEERARGVVAASAGNhaqgvayaarL--------- 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  72 nLGLKACIVVPNTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQ 151
Cdd:COG1171   94 -LGIPATIVMPETAPAVKVAATRAYGAEVVLHGDTYDDAEAAAAELAEEEGATFVHPFDDPDVIAGQGTIALEILEQLPD 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 152 VDALVTSVGGGGLlAGLLTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQVAAWPVQHILDF 231
Cdd:COG1171  173 LDAVFVPVGGGGL-IAGVAAALKALSPDIRVIGVEPEGAAAMYRSLAAGEPVTLPGVDTIADGLAVGRPGELTFEILRDL 251
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 517758762 232 PHECVVLSDDEAIMGVVRYANDLRQLVEPACGVSLAiAYLDHPAIAEAHDVVIVVCGG 289
Cdd:COG1171  252 VDDIVTVSEDEIAAAMRLLLERTKIVVEPAGAAALA-ALLAGKERLKGKRVVVVLSGG 308
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
1-288 1.14e-51

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 172.11  E-value: 1.14e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762    1 MLHIRTPLILHPGLSTPT-RRIWLKLENLQPSGSFKLRGMGLLCSQAAE-QGKRKVVCPSGGNAGLATAVAAANLGLKAC 78
Cdd:pfam00291   3 LGIGPTPLVRLPRLSKELgVDVYLKLESLNPTGSFKDRGALNLLLRLKEgEGGKTVVEASSGNHGRALAAAAARLGLKVT 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   79 IVVPNTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAK-GADTEYVPAFDHPVLWEGHSTMVDEILEDC-PQVDALV 156
Cdd:pfam00291  83 IVVPEDAPPGKLLLMRALGAEVVLVGGDYDEAVAAARELAAeGPGAYYINQYDNPLNIEGYGTIGLEILEQLgGDPDAVV 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  157 TSVgGGGLLAGLLTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQV-AAWPVQHILDFPHEC 235
Cdd:pfam00291 163 VPV-GGGGLIAGIARGLKELGPDVRVIGVEPEGAPALARSLAAGRPVPVPVADTIADGLGVGDEpGALALDLLDEYVGEV 241
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 517758762  236 VVLSDDEAIMGVVRYANDLRQLVEPACGVSLAIAYL-DHPAIAEAHDVVIVVCG 288
Cdd:pfam00291 242 VTVSDEEALEAMRLLARREGIVVEPSSAAALAALKLaLAGELKGGDRVVVVLTG 295
PRK08246 PRK08246
serine/threonine dehydratase;
3-289 7.95e-35

serine/threonine dehydratase;


Pssm-ID: 181319 [Multi-domain]  Cd Length: 310  Bit Score: 128.53  E-value: 7.95e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   3 HIR-TPLILHPGLSTPTRRIWLKLENLQPSGSFKLRGM--GLLCSQAAEQGkrkVVCPSGGNAGLATAVAAANLGLKACI 79
Cdd:PRK08246  20 HIRrTPVLEADGAGFGPAPVWLKLEHLQHTGSFKARGAfnRLLAAPVPAAG---VVAASGGNAGLAVAYAAAALGVPATV 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  80 VVPNTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQVDALVTSV 159
Cdd:PRK08246  97 FVPETAPPAKVARLRALGAEVVVVGAEYADALEAAQAFAAETGALLCHAYDQPEVLAGAGTLGLEIEEQAPGVDTVLVAV 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 160 GGGGLLAGLLTGLIRHQrmdcRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQVAAWPVQHILDFPHECVVLS 239
Cdd:PRK08246 177 GGGGLIAGIAAWFEGRA----RVVAVEPEGAPTLHAALAAGEPVDVPVSGIAADSLGARRVGEIAFALARAHVVTSVLVS 252
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 517758762 240 DDEAIMGVVRYANDLRQLVEPACGVSLAI----AYLdhPAIAEAhdVVIVVCGG 289
Cdd:PRK08246 253 DEAIIAARRALWEELRLAVEPGAATALAAllsgAYV--PAPGER--VAVVLCGA 302
ectoine_eutB TIGR02991
ectoine utilization protein EutB; Members of this protein family are EutB, a predicted ...
5-289 2.34e-21

ectoine utilization protein EutB; Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.


Pssm-ID: 132036 [Multi-domain]  Cd Length: 317  Bit Score: 92.22  E-value: 2.34e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762    5 RTPLILHPGLSTPT-RRIWLKLENLQPSGSFKLRG-MGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVP 82
Cdd:TIGR02991  19 ETPLVESPSLSELCgVPVHLKLEHRQTTGSFKLRGaTNAVLSLSDTQRAAGVVAASTGNHGRALAYAAAEEGVRATICMS 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   83 NTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQVdALVTSVGGG 162
Cdd:TIGR02991  99 ELVPQNKVDEIRRLGAEVRIVGRSQDDAQEEVERLVADRGLTMLPPFDHPDIVAGQGTLGLEVVEQMPDL-ATVLVPLSG 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  163 GLLAGLLTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQVAAWPVQHIL--DFPHECVVLSD 240
Cdd:TIGR02991 178 GGLASGVAMAVKAARPDTRVIGVSMERGAAMKASLQAGRPVLVAELPTLADSLGGGIGLDNRVTFAMckALLDEIVLVSE 257
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 517758762  241 DEAIMGVVRYANDLRQLVEPACGVslAIAYLDHPAIAEAHDVVIVVCGG 289
Cdd:TIGR02991 258 AEIAAGIRHAYAEEREIVEGAGAV--GIAALLAGKIKNPGPCAVIVSGR 304
 
Name Accession Description Interval E-value
L-Ser-dehyd cd06448
Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the ...
6-300 5.02e-85

Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.


Pssm-ID: 107209  Cd Length: 316  Bit Score: 258.38  E-value: 5.02e-85
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   6 TPLILHPGLSTPT-RRIWLKLENLQPSGSFKLRGMGLLCSQAAEQGKRK---VVCPSGGNAGLATAVAAANLGLKACIVV 81
Cdd:cd06448    2 TPLIESTALSKTAgCNVFLKLENLQPSGSFKIRGIGHLCQKSAKQGLNEcvhVVCSSGGNAGLAAAYAARKLGVPCTIVV 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  82 PNTTPETTRARIRKTGAEVIVHGKVW-DEANQRAKELAKG-ADTEYVPAFDHPVLWEGHSTMVDEI---LEDCPQVDALV 156
Cdd:cd06448   82 PESTKPRVVEKLRDEGATVVVHGKVWwEADNYLREELAENdPGPVYVHPFDDPLIWEGHSSMVDEIaqqLQSQEKVDAIV 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 157 TSVGGGGLLAGLLTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQVAAWPVQHILDFPHECV 236
Cdd:cd06448  162 CSVGGGGLLNGIVQGLERNGWGDIPVVAVETEGAHSLNASLKAGKLVTLPKITSVATSLGAKTVSSQALEYAQEHNIKSE 241
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 517758762 237 VLSDDEAIMGVVRYANDLRQLVEPACGVSLAIAYldHPAI----AEAHD-----VVIVVCGGVSISAQLVAGW 300
Cdd:cd06448  242 VVSDRDAVQACLRFADDERILVEPACGAALAVVY--SGKIldlqLEVLLtpldnVVVVVCGGSNITLEQLKEY 312
IlvA COG1171
Threonine deaminase [Amino acid transport and metabolism]; Threonine deaminase is part of the ...
4-289 1.17e-56

Threonine deaminase [Amino acid transport and metabolism]; Threonine deaminase is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis


Pssm-ID: 440784 [Multi-domain]  Cd Length: 327  Bit Score: 186.01  E-value: 1.17e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   4 IRTPLILHPGLSTPT-RRIWLKLENLQPSGSFKLRG-MGLLCSQAAEQGKRKVVCPSGGN----------Aglatavaaa 71
Cdd:COG1171   23 RRTPLLRSPTLSERLgAEVYLKLENLQPTGSFKLRGaYNALASLSEEERARGVVAASAGNhaqgvayaarL--------- 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  72 nLGLKACIVVPNTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQ 151
Cdd:COG1171   94 -LGIPATIVMPETAPAVKVAATRAYGAEVVLHGDTYDDAEAAAAELAEEEGATFVHPFDDPDVIAGQGTIALEILEQLPD 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 152 VDALVTSVGGGGLlAGLLTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQVAAWPVQHILDF 231
Cdd:COG1171  173 LDAVFVPVGGGGL-IAGVAAALKALSPDIRVIGVEPEGAAAMYRSLAAGEPVTLPGVDTIADGLAVGRPGELTFEILRDL 251
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 517758762 232 PHECVVLSDDEAIMGVVRYANDLRQLVEPACGVSLAiAYLDHPAIAEAHDVVIVVCGG 289
Cdd:COG1171  252 VDDIVTVSEDEIAAAMRLLLERTKIVVEPAGAAALA-ALLAGKERLKGKRVVVVLSGG 308
PALP pfam00291
Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate ...
1-288 1.14e-51

Pyridoxal-phosphate dependent enzyme; Members of this family are all pyridoxal-phosphate dependent enzymes. This family includes: serine dehydratase EC:4.2.1.13 P20132, threonine dehydratase EC:4.2.1.16, tryptophan synthase beta chain EC:4.2.1.20, threonine synthase EC:4.2.99.2, cysteine synthase EC:4.2.99.8 P11096, cystathionine beta-synthase EC:4.2.1.22, 1-aminocyclopropane-1-carboxylate deaminase EC:4.1.99.4.


Pssm-ID: 459749 [Multi-domain]  Cd Length: 295  Bit Score: 172.11  E-value: 1.14e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762    1 MLHIRTPLILHPGLSTPT-RRIWLKLENLQPSGSFKLRGMGLLCSQAAE-QGKRKVVCPSGGNAGLATAVAAANLGLKAC 78
Cdd:pfam00291   3 LGIGPTPLVRLPRLSKELgVDVYLKLESLNPTGSFKDRGALNLLLRLKEgEGGKTVVEASSGNHGRALAAAAARLGLKVT 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   79 IVVPNTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAK-GADTEYVPAFDHPVLWEGHSTMVDEILEDC-PQVDALV 156
Cdd:pfam00291  83 IVVPEDAPPGKLLLMRALGAEVVLVGGDYDEAVAAARELAAeGPGAYYINQYDNPLNIEGYGTIGLEILEQLgGDPDAVV 162
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  157 TSVgGGGLLAGLLTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQV-AAWPVQHILDFPHEC 235
Cdd:pfam00291 163 VPV-GGGGLIAGIARGLKELGPDVRVIGVEPEGAPALARSLAAGRPVPVPVADTIADGLGVGDEpGALALDLLDEYVGEV 241
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....
gi 517758762  236 VVLSDDEAIMGVVRYANDLRQLVEPACGVSLAIAYL-DHPAIAEAHDVVIVVCG 288
Cdd:pfam00291 242 VTVSDEEALEAMRLLARREGIVVEPSSAAALAALKLaLAGELKGGDRVVVVLTG 295
Thr-dehyd cd01562
Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. ...
4-289 5.27e-50

Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.


Pssm-ID: 107205 [Multi-domain]  Cd Length: 304  Bit Score: 168.05  E-value: 5.27e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   4 IRTPLILHPGLSTPTR-RIWLKLENLQPSGSFKLRG-MGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVV 81
Cdd:cd01562   16 RRTPLLTSPTLSELLGaEVYLKCENLQKTGSFKIRGaYNKLLSLSEEERAKGVVAASAGNHAQGVAYAAKLLGIPATIVM 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  82 PNTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQVDALVTSVGG 161
Cdd:cd01562   96 PETAPAAKVDATRAYGAEVVLYGEDFDEAEAKARELAEEEGLTFIHPFDDPDVIAGQGTIGLEILEQVPDLDAVFVPVGG 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 162 GgLLAGLLTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQVAAWPVQHILDFPHECVVLSDD 241
Cdd:cd01562  176 G-GLIAGIATAVKALSPNTKVIGVEPEGAPAMAQSLAAGKPVTLPEVDTIADGLAVKRPGELTFEIIRKLVDDVVTVSED 254
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*...
gi 517758762 242 EAIMGVVRYANDLRQLVEPACGVSLAIAYLDHPAIAEAHdVVIVVCGG 289
Cdd:cd01562  255 EIAAAMLLLFEREKLVAEPAGALALAALLSGKLDLKGKK-VVVVLSGG 301
Trp-synth-beta_II cd00640
Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP) ...
6-289 2.07e-44

Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehyd catalyzes the conversion of L- or D-serine to pyruvate and ammonia. Thr-dehyd is active as a homodimer and catalyzes the conversion of L-threonine to 2-oxobutanoate and ammonia. DAL is also a homodimer and catalyzes the alpha, beta-elimination reaction of both L- and D-alpha, beta-diaminopropionate to form pyruvate and ammonia. Thr-synth catalyzes the formation of threonine and inorganic phosphate from O-phosphohomoserine.


Pssm-ID: 107202 [Multi-domain]  Cd Length: 244  Bit Score: 151.51  E-value: 2.07e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   6 TPLILHPGLSTPT-RRIWLKLENLQPSGSFKLRGMGLLCSQAAEQGKRK---VVCPSGGNAGLATAVAAANLGLKACIVV 81
Cdd:cd00640    1 TPLVRLKRLSKLGgANIYLKLEFLNPTGSFKDRGALNLILLAEEEGKLPkgvIIESTGGNTGIALAAAAARLGLKCTIVM 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  82 PNTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGA-DTEYVPAFDHPVLWEGHSTMVDEILEDCPQ--VDALVTS 158
Cdd:cd00640   81 PEGASPEKVAQMRALGAEVVLVPGDFDDAIALAKELAEEDpGAYYVNQFDNPANIAGQGTIGLEILEQLGGqkPDAVVVP 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 159 VggggllagllTGLIRHQRMDCRIVACEtqgaasfaaaiaaghpvrlPRIDTVatslgaaqvaawpvqhildfphecvvl 238
Cdd:cd00640  161 Vggggn-iagiARALKELLPNVKVIGVE-------------------PEVVTV--------------------------- 193
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 517758762 239 SDDEAIMGVVRYANDLRQLVEPACGVSLAIAYLDHPAIAEAHDVVIVVCGG 289
Cdd:cd00640  194 SDEEALEAIRLLAREEGILVEPSSAAALAAALKLAKKLGKGKTVVVILTGG 244
PRK08246 PRK08246
serine/threonine dehydratase;
3-289 7.95e-35

serine/threonine dehydratase;


Pssm-ID: 181319 [Multi-domain]  Cd Length: 310  Bit Score: 128.53  E-value: 7.95e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   3 HIR-TPLILHPGLSTPTRRIWLKLENLQPSGSFKLRGM--GLLCSQAAEQGkrkVVCPSGGNAGLATAVAAANLGLKACI 79
Cdd:PRK08246  20 HIRrTPVLEADGAGFGPAPVWLKLEHLQHTGSFKARGAfnRLLAAPVPAAG---VVAASGGNAGLAVAYAAAALGVPATV 96
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  80 VVPNTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQVDALVTSV 159
Cdd:PRK08246  97 FVPETAPPAKVARLRALGAEVVVVGAEYADALEAAQAFAAETGALLCHAYDQPEVLAGAGTLGLEIEEQAPGVDTVLVAV 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 160 GGGGLLAGLLTGLIRHQrmdcRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQVAAWPVQHILDFPHECVVLS 239
Cdd:PRK08246 177 GGGGLIAGIAAWFEGRA----RVVAVEPEGAPTLHAALAAGEPVDVPVSGIAADSLGARRVGEIAFALARAHVVTSVLVS 252
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....
gi 517758762 240 DDEAIMGVVRYANDLRQLVEPACGVSLAI----AYLdhPAIAEAhdVVIVVCGG 289
Cdd:PRK08246 253 DEAIIAARRALWEELRLAVEPGAATALAAllsgAYV--PAPGER--VAVVLCGA 302
PRK12483 PRK12483
threonine dehydratase; Reviewed
4-269 1.63e-28

threonine dehydratase; Reviewed


Pssm-ID: 237111 [Multi-domain]  Cd Length: 521  Bit Score: 114.89  E-value: 1.63e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   4 IRTPLILHPGLSTPTR-RIWLKLENLQPSGSFKLRGMGLLCSQ-AAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVV 81
Cdd:PRK12483  36 RETPLQRAPNLSARLGnQVLLKREDLQPVFSFKIRGAYNKMARlPAEQLARGVITASAGNHAQGVALAAARLGVKAVIVM 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  82 PNTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCP-QVDALVTSVg 160
Cdd:PRK12483 116 PRTTPQLKVDGVRAHGGEVVLHGESFPDALAHALKLAEEEGLTFVPPFDDPDVIAGQGTVAMEILRQHPgPLDAIFVPV- 194
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 161 GGGLLAGLLTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQVAAWPVQHILDFPHECVVLSD 240
Cdd:PRK12483 195 GGGGLIAGIAAYVKYVRPEIKVIGVEPDDSNCLQAALAAGERVVLGQVGLFADGVAVAQIGEHTFELCRHYVDEVVTVST 274
                        250       260
                 ....*....|....*....|....*....
gi 517758762 241 DEAIMGVVRYANDLRQLVEPACgvSLAIA 269
Cdd:PRK12483 275 DELCAAIKDIYDDTRSITEPAG--ALAVA 301
eutB PRK07476
threonine dehydratase; Provisional
5-289 1.74e-26

threonine dehydratase; Provisional


Pssm-ID: 236025 [Multi-domain]  Cd Length: 322  Bit Score: 106.20  E-value: 1.74e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   5 RTPLILHPGLSTPTRR-IWLKLENLQPSGSFKLRG-MGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVP 82
Cdd:PRK07476  19 RTPLVASASLSARAGVpVWLKLETLQPTGSFKLRGaTNALLSLSAQERARGVVTASTGNHGRALAYAARALGIRATICMS 98
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  83 NTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQVDALVTSVgGG 162
Cdd:PRK07476  99 RLVPANKVDAIRALGAEVRIVGRSQDDAQAEVERLVREEGLTMVPPFDDPRIIAGQGTIGLEILEALPDVATVLVPL-SG 177
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 163 GLLAGLLTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAA-----QVAAWPVQHILDfpheCVV 237
Cdd:PRK07476 178 GGLASGVAAAVKAIRPAIRVIGVSMERGAAMHASLAAGRPVQVEEVPTLADSLGGGigldnRYTFAMCRALLD----DVV 253
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|...
gi 517758762 238 LSDDEAIMGVVRYANDL-RQLVEPACGVSLAiAYLDHPAIAEAHDVVIVVCGG 289
Cdd:PRK07476 254 LLDEAEIAAGIRHAYREeRLVVEGAGAVGIA-ALLAGKIAARDGPIVVVVSGA 305
PRK08639 PRK08639
threonine dehydratase; Validated
5-289 2.34e-26

threonine dehydratase; Validated


Pssm-ID: 236318 [Multi-domain]  Cd Length: 420  Bit Score: 107.58  E-value: 2.34e-26
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   5 RTPLILHPGLSTPTR-RIWLKLENLQPSGSFKLRG-MGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVP 82
Cdd:PRK08639  25 ETPLQRNDYLSEKYGaNVYLKREDLQPVRSYKLRGaYNAISQLSDEELAAGVVCASAGNHAQGVAYACRHLGIPGVIFMP 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  83 NTTPETTRARIRKTGA---EVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQ---VDALV 156
Cdd:PRK08639 105 VTTPQQKIDQVRFFGGefvEIVLVGDTFDDSAAAAQEYAEETGATFIPPFDDPDVIAGQGTVAVEILEQLEKegsPDYVF 184
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 157 TSVGGGGLLAGLLTGlIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATslGAA--QVAAWPVQHILDFPHE 234
Cdd:PRK08639 185 VPVGGGGLISGVTTY-LKERSPKTKIIGVEPAGAASMKAALEAGKPVTLEKIDKFVD--GAAvaRVGDLTFEILKDVVDD 261
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 517758762 235 CVVLSDD---EAIM------GVVryandlrqlVEPAcGvSLAIAYLDHPAIA-EAHDVVIVVCGG 289
Cdd:PRK08639 262 VVLVPEGavcTTILelynkeGIV---------AEPA-G-ALSIAALELYKDEiKGKTVVCVISGG 315
PRK09224 PRK09224
threonine ammonia-lyase IlvA;
4-267 3.31e-25

threonine ammonia-lyase IlvA;


Pssm-ID: 236417 [Multi-domain]  Cd Length: 504  Bit Score: 105.22  E-value: 3.31e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   4 IRTPLILHPGLSTPTR-RIWLKLENLQPSGSFKLRG----MGLLcsqAAEQGKRKVVCPSGGNAGLATAVAAANLGLKAC 78
Cdd:PRK09224  19 QETPLEKAPKLSARLGnQVLLKREDLQPVFSFKLRGaynkMAQL---TEEQLARGVITASAGNHAQGVALSAARLGIKAV 95
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  79 IVVPNTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQ-VDA--- 154
Cdd:PRK09224  96 IVMPVTTPDIKVDAVRAFGGEVVLHGDSFDEAYAHAIELAEEEGLTFIHPFDDPDVIAGQGTIAMEILQQHPHpLDAvfv 175
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 155 ------LVTSVggggllagllTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRI----DTVATslgaAQVAAWP 224
Cdd:PRK09224 176 pvggggLIAGV----------AAYIKQLRPEIKVIGVEPEDSACLKAALEAGERVDLPQVglfaDGVAV----KRIGEET 241
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 517758762 225 ---VQHILDfphECVVLSDDE---AIMGVVryaNDLRQLVEPACGVSLA 267
Cdd:PRK09224 242 frlCQEYVD---DVITVDTDEicaAIKDVF---EDTRSIAEPAGALALA 284
PRK07334 PRK07334
threonine dehydratase; Provisional
4-289 1.16e-24

threonine dehydratase; Provisional


Pssm-ID: 235994 [Multi-domain]  Cd Length: 403  Bit Score: 102.66  E-value: 1.16e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   4 IRTPLILHPGLSTPT-RRIWLKLENLQPSGSFKLRG-MGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVV 81
Cdd:PRK07334  22 LRTPCVHSRTLSQITgAEVWLKFENLQFTASFKERGaLNKLLLLTEEERARGVIAMSAGNHAQGVAYHAQRLGIPATIVM 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  82 PNTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQVDALVTSVGG 161
Cdd:PRK07334 102 PRFTPTVKVERTRGFGAEVVLHGETLDEARAHARELAEEEGLTFVHPYDDPAVIAGQGTVALEMLEDAPDLDTLVVPIGG 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 162 GGLLAGLLTGLiRHQRMDCRIVACETQG-AASFAAAIAAGHPVrlpRIDTVATSLGAAQVAAWPVQHILDFPHECVVLSD 240
Cdd:PRK07334 182 GGLISGMATAA-KALKPDIEIIGVQTELyPSMYAAIKGVALPC---GGSTIAEGIAVKQPGQLTLEIVRRLVDDILLVSE 257
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 517758762 241 DEAIMGVVRYANDLRQLVEPACGVSLAiAYLDHPAIAEAHDVVIVVCGG 289
Cdd:PRK07334 258 ADIEQAVSLLLEIEKTVVEGAGAAGLA-ALLAYPERFRGRKVGLVLSGG 305
PRK06815 PRK06815
threonine/serine dehydratase;
3-298 2.10e-24

threonine/serine dehydratase;


Pssm-ID: 180709 [Multi-domain]  Cd Length: 317  Bit Score: 100.54  E-value: 2.10e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   3 HIR-TPLILHPGLSTPTR-RIWLKLENLQPSGSFKLRG----MGLLcsqAAEQGKRKVVCPSGGNAGLATAVAAANLGLK 76
Cdd:PRK06815  17 QVRvTPLEHSPLLSQHTGcEVYLKCEHLQHTGSFKFRGasnkLRLL---NEAQRQQGVITASSGNHGQGVALAAKLAGIP 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  77 ACIVVPNTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQVDALV 156
Cdd:PRK06815  94 VTVYAPEQASAIKLDAIRALGAEVRLYGGDALNAELAARRAAEQQGKVYISPYNDPQVIAGQGTIGMELVEQQPDLDAVF 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 157 TSVGGGGlLAGLLTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVA--TSLGAAQVA-AWPV-QHILDfp 232
Cdd:PRK06815 174 VAVGGGG-LISGIATYLKTLSPKTEIIGCWPANSPSLYTSLEAGEIVEVAEQPTLSdgTAGGVEPGAiTFPLcQQLID-- 250
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 517758762 233 hECVVLSDDEaIMGVVR-YANDLRQLVEPACGVSLAiAYLDHPAIAEAHDVVIVVCGG-VSISAQLVA 298
Cdd:PRK06815 251 -QKVLVSEEE-IKEAMRlIAETDRWLIEGAAGVALA-AALKLAPRYQGKKVAVVLCGKnIVLEKYLEA 315
PLN02550 PLN02550
threonine dehydratase
4-146 6.92e-23

threonine dehydratase


Pssm-ID: 178165 [Multi-domain]  Cd Length: 591  Bit Score: 98.84  E-value: 6.92e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   4 IRTPLILHPGLSTPTR-RIWLKLENLQPSGSFKLRGM-GLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVV 81
Cdd:PLN02550 108 IESPLQLAKKLSERLGvKVLLKREDLQPVFSFKLRGAyNMMAKLPKEQLDKGVICSSAGNHAQGVALSAQRLGCDAVIAM 187
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 517758762  82 PNTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEIL 146
Cdd:PLN02550 188 PVTTPEIKWQSVERLGATVVLVGDSYDEAQAYAKQRALEEGRTFIPPFDHPDVIAGQGTVGMEIV 252
PRK08638 PRK08638
bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;
5-163 2.17e-22

bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB;


Pssm-ID: 236317 [Multi-domain]  Cd Length: 333  Bit Score: 95.19  E-value: 2.17e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   5 RTPLILHPGLSTPTR-RIWLKLENLQPSGSFKLRG-MGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVP 82
Cdd:PRK08638  27 KTPLPRSNYLSERCKgEIFLKLENMQRTGSFKIRGaFNKLSSLTDAEKRKGVVACSAGNHAQGVALSCALLGIDGKVVMP 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  83 NTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQVDALVTSVGGG 162
Cdd:PRK08638 107 KGAPKSKVAATCGYGAEVVLHGDNFNDTIAKVEEIVEEEGRTFIPPYDDPKVIAGQGTIGLEILEDLWDVDTVIVPIGGG 186

                 .
gi 517758762 163 G 163
Cdd:PRK08638 187 G 187
PLN02970 PLN02970
serine racemase
5-289 3.77e-22

serine racemase


Pssm-ID: 215524 [Multi-domain]  Cd Length: 328  Bit Score: 94.75  E-value: 3.77e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   5 RTPLILHPGL-STPTRRIWLKLENLQPSGSFKLRG-MGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVP 82
Cdd:PLN02970  27 RTPVLTSSSLdALAGRSLFFKCECFQKGGAFKFRGaCNAIFSLSDDQAEKGVVTHSSGNHAAALALAAKLRGIPAYIVVP 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  83 NTTPETTRARIRKTGAEVIvhgkvWDEANQRAKE-----LAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQVDALVT 157
Cdd:PLN02970 107 KNAPACKVDAVIRYGGIIT-----WCEPTVESREavaarVQQETGAVLIHPYNDGRVISGQGTIALEFLEQVPELDVIIV 181
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 158 SVGGGGLLAGLLTGLiRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVA----TSLGAaqvAAWPVqhILDFPH 233
Cdd:PLN02970 182 PISGGGLISGIALAA-KAIKPSIKIIAAEPKGADDAAQSKAAGEIITLPVTNTIAdglrASLGD---LTWPV--VRDLVD 255
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 234 ECVVLSDDEAIMGVVRYANDLRQLVEPACGVSLAIA----YLDHPAIAEAHDVVIVVCGG 289
Cdd:PLN02970 256 DVITVDDKEIIEAMKLCYERLKVVVEPSGAIGLAAAlsdsFRSNPAWKGCKNVGIVLSGG 315
ectoine_eutB TIGR02991
ectoine utilization protein EutB; Members of this protein family are EutB, a predicted ...
5-289 2.34e-21

ectoine utilization protein EutB; Members of this protein family are EutB, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. Members of this family resemble threonine dehydratases.


Pssm-ID: 132036 [Multi-domain]  Cd Length: 317  Bit Score: 92.22  E-value: 2.34e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762    5 RTPLILHPGLSTPT-RRIWLKLENLQPSGSFKLRG-MGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVP 82
Cdd:TIGR02991  19 ETPLVESPSLSELCgVPVHLKLEHRQTTGSFKLRGaTNAVLSLSDTQRAAGVVAASTGNHGRALAYAAAEEGVRATICMS 98
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   83 NTTPETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQVdALVTSVGGG 162
Cdd:TIGR02991  99 ELVPQNKVDEIRRLGAEVRIVGRSQDDAQEEVERLVADRGLTMLPPFDHPDIVAGQGTLGLEVVEQMPDL-ATVLVPLSG 177
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  163 GLLAGLLTGLIRHQRMDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQVAAWPVQHIL--DFPHECVVLSD 240
Cdd:TIGR02991 178 GGLASGVAMAVKAARPDTRVIGVSMERGAAMKASLQAGRPVLVAELPTLADSLGGGIGLDNRVTFAMckALLDEIVLVSE 257
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*....
gi 517758762  241 DEAIMGVVRYANDLRQLVEPACGVslAIAYLDHPAIAEAHDVVIVVCGG 289
Cdd:TIGR02991 258 AEIAAGIRHAYAEEREIVEGAGAV--GIAALLAGKIKNPGPCAVIVSGR 304
Thr-synth_1 cd01563
Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last ...
6-288 6.76e-21

Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.


Pssm-ID: 107206 [Multi-domain]  Cd Length: 324  Bit Score: 91.12  E-value: 6.76e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   6 TPLILHPGLST--PTRRIWLKLENLQPSGSFKLRGMGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVPN 83
Cdd:cd01563   23 TPLVRAPRLGErlGGKNLYVKDEGLNPTGSFKDRGMTVAVSKAKELGVKAVACASTGNTSASLAAYAARAGIKCVVFLPA 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  84 TTPETTRARIRKTGAEVI-VHGKVwDEANQRAKELAKGaDTEYVPAFDHPVLWEGHSTMVDEILE----DCPqvDALV-- 156
Cdd:cd01563  103 GKALGKLAQALAYGATVLaVEGNF-DDALRLVRELAEE-NWIYLSNSLNPYRLEGQKTIAFEIAEqlgwEVP--DYVVvp 178
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 157 -------TSVGGGGLLAGLLTGLIRHQRMdcriVACETQGAASFAAAIAAG--HPVRLPRIDTVATSLGAAQVAAWPvqH 227
Cdd:cd01563  179 vgnggniTAIWKGFKELKELGLIDRLPRM----VGVQAEGAAPIVRAFKEGkdDIEPVENPETIATAIRIGNPASGP--K 252
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 517758762 228 ILDFPHE----CVVLSDDEAIMGVVRYANDLRQLVEPACGVSLA--IAYLDHPAIAEAHDVVIVVCG 288
Cdd:cd01563  253 ALRAVREsggtAVAVSDEEILEAQKLLARTEGIFVEPASAASLAglKKLREEGIIDKGERVVVVLTG 319
PRK08813 PRK08813
threonine dehydratase; Provisional
21-152 3.21e-19

threonine dehydratase; Provisional


Pssm-ID: 236339 [Multi-domain]  Cd Length: 349  Bit Score: 86.60  E-value: 3.21e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  21 IWLKLENLQPSGSFKLRGMGLLCSQAAEQG-KRKVVCPSGGNAGLATAVAAANLGLKACIVVPNTTPETTRARIRKTGAE 99
Cdd:PRK08813  50 VWLKLENLQRTGSYKVRGALNALLAGLERGdERPVICASAGNHAQGVAWSAYRLGVQAITVMPHGAPQTKIAGVAHWGAT 129
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 517758762 100 VIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQV 152
Cdd:PRK08813 130 VRQHGNSYDEAYAFARELADQNGYRFLSAFDDPDVIAGQGTVGIELAAHAPDV 182
CBS_like cd01561
CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS ...
5-159 1.92e-17

CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.


Pssm-ID: 107204 [Multi-domain]  Cd Length: 291  Bit Score: 80.64  E-value: 1.92e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   5 RTPLILHPGLSTPTR-RIWLKLENLQPSGSFKLRgMGL-LCSQAAEQGKRK----VVCPSGGNAGLATAVAAANLGLKAC 78
Cdd:cd01561    2 NTPLVRLNRLSPGTGaEIYAKLEFFNPGGSVKDR-IALyMIEDAEKRGLLKpgttIIEPTSGNTGIGLAMVAAAKGYRFI 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  79 IVVPNTTPETTRARIRKTGAEVIV---HGKVW-DEANQRAKELAKGADTEYVP-AFDHPVLWEGH--STMvDEILEDCP- 150
Cdd:cd01561   81 IVMPETMSEEKRKLLRALGAEVILtpeAEADGmKGAIAKARELAAETPNAFWLnQFENPANPEAHyeTTA-PEIWEQLDg 159

                 ....*....
gi 517758762 151 QVDALVTSV 159
Cdd:cd01561  160 KVDAFVAGV 168
PRK07048 PRK07048
threo-3-hydroxy-L-aspartate ammonia-lyase;
20-299 8.37e-17

threo-3-hydroxy-L-aspartate ammonia-lyase;


Pssm-ID: 235918 [Multi-domain]  Cd Length: 321  Bit Score: 79.29  E-value: 8.37e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  20 RIWLKLENLQPSGSFKLRG-MGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVPNTTPETTRARIRKTGA 98
Cdd:PRK07048  40 QVFFKCENFQRMGAFKFRGaYNALSQFSPEQRRAGVVTFSSGNHAQAIALSARLLGIPATIVMPQDAPAAKVAATRGYGG 119
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  99 EVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQVDALVTSVGGGGLLAGLLTGLiRHQRM 178
Cdd:PRK07048 120 EVVTYDRYTEDREEIGRRLAEERGLTLIPPYDHPHVIAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGCALAA-RALSP 198
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 179 DCRIVACETQGAASFAAAIAAGHPVRLPRIDTVA-----TSLGAAQVAAwpVQHILDfphECVVLSDDEAIMGVVRYAND 253
Cdd:PRK07048 199 GCKVYGVEPEAGNDGQQSFRSGEIVHIDTPRTIAdgaqtQHLGNYTFPI--IRRLVD---DIVTVSDAELVDAMRFFAER 273
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 517758762 254 LRQLVEPACGVSLAiAYLDHPAIAEAHDVVIVVCGG-VSIS--AQLVAG 299
Cdd:PRK07048 274 MKIVVEPTGCLGAA-AALRGKVPLKGKRVGVIISGGnVDLArfAALLSG 321
PRK06608 PRK06608
serine/threonine dehydratase;
20-158 1.16e-16

serine/threonine dehydratase;


Pssm-ID: 235842 [Multi-domain]  Cd Length: 338  Bit Score: 79.04  E-value: 1.16e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  20 RIWLKLENLQPSGSFKLRGMGLLCSQAAEQGKR--KVVCPSGGNAGLATAVAAANLGLKACIVVPNTTPETTRARIRKTG 97
Cdd:PRK06608  39 EIFFKVESLQKTGAFKVRGVLNHLLELKEQGKLpdKIVAYSTGNHGQAVAYASKLFGIKTRIYLPLNTSKVKQQAALYYG 118
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 517758762  98 AEVIVHgKVWDEANQRAKElAKGADTEYVPAFDHPVLWEGHSTMVDEILEDC-PQVDALVTS 158
Cdd:PRK06608 119 GEVILT-NTRQEAEEKAKE-DEEQGFYYIHPSDSDSTIAGAGTLCYEALQQLgFSPDAIFAS 178
PRK06110 PRK06110
threonine dehydratase;
21-300 2.03e-14

threonine dehydratase;


Pssm-ID: 235699  Cd Length: 322  Bit Score: 72.72  E-value: 2.03e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  21 IWLKLENLQPSGSFKLRGmGLLCSQA---AEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVPNTTPETTRARIRKTG 97
Cdd:PRK06110  38 VWVKHENHTPTGAFKVRG-GLVYFDRlarRGPRVRGVISATRGNHGQSVAFAARRHGLAATIVVPHGNSVEKNAAMRALG 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  98 AEVIVHGKVWDEANQRAKELAKGADTEYVPAFdHPVLWEGHSTMVDEILEDCPQVDALVTSVGGGGLLAGLLTGLiRHQR 177
Cdd:PRK06110 117 AELIEHGEDFQAAREEAARLAAERGLHMVPSF-HPDLVRGVATYALELFRAVPDLDVVYVPIGMGSGICGAIAAR-DALG 194
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762 178 MDCRIVACETQGAASFAAAIAAGHPVRLPRIDTVATSLGAAQVAAWPVQHILDFPHECVVLSDDEAIMGVVRYANDLRQL 257
Cdd:PRK06110 195 LKTRIVGVVSAHAPAYALSFEAGRVVTTPVATTLADGMACRTPDPEALEVIRAGADRIVRVTDDEVAAAMRAYFTDTHNV 274
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 517758762 258 VEPACGVSLAIAYLDHPAIAeAHDVVIVVCGGvSISAQLVAGW 300
Cdd:PRK06110 275 AEGAGAAALAAALQERERLA-GKRVGLVLSGG-NIDRAVFARV 315
PRK08197 PRK08197
threonine synthase; Validated
6-147 4.18e-14

threonine synthase; Validated


Pssm-ID: 181283 [Multi-domain]  Cd Length: 394  Bit Score: 71.96  E-value: 4.18e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   6 TPLILHPGLSTPT--RRIWLKLENLQPSGSFKLRGMGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVPN 83
Cdd:PRK08197  80 TPLLPLPRLGKALgiGRLWVKDEGLNPTGSFKARGLAVGVSRAKELGVKHLAMPTNGNAGAAWAAYAARAGIRATIFMPA 159
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  84 TTPETTRARIRKTGAEVI-VHGKVWDEANQRAKELAKgadteyVPAFD-----HPVLWEGHSTMVDEILE 147
Cdd:PRK08197 160 DAPEITRLECALAGAELYlVDGLISDAGKIVAEAVAE------YGWFDvstlkEPYRIEGKKTMGLELAE 223
ThrC COG0498
Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the ...
6-119 5.95e-14

Threonine synthase [Amino acid transport and metabolism]; Threonine synthase is part of the Pathway/BioSystem: Threonine biosynthesis


Pssm-ID: 440264 [Multi-domain]  Cd Length: 394  Bit Score: 71.77  E-value: 5.95e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   6 TPLILHPGLS-TPTRRIWLKLENLQPSGSFKLRGMGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVP-N 83
Cdd:COG0498   67 TPLVKAPRLAdELGKNLYVKEEGHNPTGSFKDRAMQVAVSLALERGAKTIVCASSGNGSAALAAYAARAGIEVFVFVPeG 146
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 517758762  84 TTPETTRARIRKTGAEVI-VHGkVWDEANQRAKELAK 119
Cdd:COG0498  147 KVSPGQLAQMLTYGAHVIaVDG-NFDDAQRLVKELAA 182
PRK08329 PRK08329
threonine synthase; Validated
10-159 2.25e-12

threonine synthase; Validated


Pssm-ID: 236244 [Multi-domain]  Cd Length: 347  Bit Score: 66.77  E-value: 2.25e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  10 LHPGLsTPTRRI----WLKLENLQPSGSFKLRGMGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVPNTT 85
Cdd:PRK08329  60 LTPPI-TPTVKRsikvYFKLDYLQPTGSFKDRGTYVTVAKLKEEGINEVVIDSSGNAALSLALYSLSEGIKVHVFVSYNA 138
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 517758762  86 PETTRARIRKTGAEV-IVHGKVWdEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILEDCPQVDALVTSV 159
Cdd:PRK08329 139 SKEKISLLSRLGAELhFVEGDRM-EVHEEAVKFSKRNNIPYVSHWLNPYFLEGTKTIAYEIYEQIGVPDYAFVPV 212
CysK COG0031
Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the ...
5-159 3.81e-11

Cysteine synthase [Amino acid transport and metabolism]; Cysteine synthase is part of the Pathway/BioSystem: Cysteine biosynthesis


Pssm-ID: 439802 [Multi-domain]  Cd Length: 301  Bit Score: 62.76  E-value: 3.81e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   5 RTPLILHPGLSTPTR-RIWLKLENLQPSGSFKLR-GMGLLcSQAAEQGKRK----VVCPSGGN----------Aglatav 68
Cdd:COG0031   13 NTPLVRLNRLSPGPGaEIYAKLESFNPGGSVKDRiALSMI-EDAEKRGLLKpggtIVEATSGNtgiglamvaaA------ 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  69 aaanLGLKACIVVPNTTPETTRARIRKTGAEVIV--HGKVWDEANQRAKELAK---GAdteYVPA-FDHPVLWEGH-STM 141
Cdd:COG0031   86 ----KGYRLILVMPETMSKERRALLRAYGAEVVLtpGAEGMKGAIDKAEELAAetpGA---FWPNqFENPANPEAHyETT 158
                        170
                 ....*....|....*....
gi 517758762 142 VDEILEDCP-QVDALVTSV 159
Cdd:COG0031  159 GPEIWEQTDgKVDAFVAGV 177
PRK05638 PRK05638
threonine synthase; Validated
6-148 6.70e-10

threonine synthase; Validated


Pssm-ID: 235539 [Multi-domain]  Cd Length: 442  Bit Score: 59.44  E-value: 6.70e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   6 TPLILHPGLSTPTRRIWLKLENLQPSGSFKLRGMGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVPNTT 85
Cdd:PRK05638  67 TPLIRARISEKLGENVYIKDETRNPTGSFRDRLATVAVSYGLPYAANGFIVASDGNAAASVAAYSARAGKEAFVVVPRKV 146
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 517758762  86 PETTRARIRKTGAEVIVHGKVWDEANQRAKELAKGADTEYVPAFDHPVLWEGHSTMVDEILED 148
Cdd:PRK05638 147 DKGKLIQMIAFGAKIIRYGESVDEAIEYAEELARLNGLYNVTPEYNIIGLEGQKTIAFELWEE 209
PRK06450 PRK06450
threonine synthase; Validated
16-148 3.91e-09

threonine synthase; Validated


Pssm-ID: 180565 [Multi-domain]  Cd Length: 338  Bit Score: 57.05  E-value: 3.91e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  16 TPTRR---IWLKLENLQPSGSFKLRGMGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVPNTTPETTRAR 92
Cdd:PRK06450  59 TPLIKkgnIWFKLDFLNPTGSYKDRGSVTLISYLAEKGIKQISEDSSGNAGASIAAYGAAAGIEVKIFVPETASGGKLKQ 138
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  93 IRKTGAEVI-VHGkvwdeanqRAKELAKGADTE---YVPAFDHPVLWEGHSTMVDEILED 148
Cdd:PRK06450 139 IESYGAEVVrVRG--------SREDVAKAAENSgyyYASHVLQPQFRDGIRTLAYEIAKD 190
thrC TIGR00260
threonine synthase; Involved in threonine biosynthesis it catalyses the reaction ...
5-119 5.77e-08

threonine synthase; Involved in threonine biosynthesis it catalyses the reaction O-PHOSPHO-L-HOMOSERINE + H(2)O = L-THREONINE + ORTHOPHOSPHATE using pyridoxal phosphate as a cofactor. the enzyme is distantly related to the serine/threonine dehydratases which are also pyridoxal-phosphate dependent enzymes. the pyridoxal-phosphate binding site is a Lys (K) residues present at residue 70 of the model. [Amino acid biosynthesis, Aspartate family]


Pssm-ID: 272986 [Multi-domain]  Cd Length: 327  Bit Score: 53.15  E-value: 5.77e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762    5 RTPLILHPGLSTP--TRRIWLKLENLQPSGSFKLRGMGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVP 82
Cdd:TIGR00260  22 VTPLFRAPALAANvgIKNLYVKELGHNPTLSFKDRGMAVALTKALELGNDTVLCASTGNTGAAAAAYAGKAGLKVVVLYP 101
                          90       100       110
                  ....*....|....*....|....*....|....*....
gi 517758762   83 N-TTPETTRARIRKTGAEVI-VHGKvWDEANQRAKELAK 119
Cdd:TIGR00260 102 AgKISLGKLAQALGYNAEVVaIDGN-FDDAQRLVKQLFE 139
PRK10717 PRK10717
cysteine synthase A; Provisional
6-159 1.52e-07

cysteine synthase A; Provisional


Pssm-ID: 182672 [Multi-domain]  Cd Length: 330  Bit Score: 52.17  E-value: 1.52e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   6 TPLILHPGLSTPT-RRIWLKLENLQPSGSFKLRGmGLLCSQAAE-QGKRK----VVCPSGGNAGLATAVAAANLGLKACI 79
Cdd:PRK10717  14 TPLIRLNRASEATgCEILGKAEFLNPGGSVKDRA-ALNIIWDAEkRGLLKpggtIVEGTAGNTGIGLALVAAARGYKTVI 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  80 VVPNTTPETTRARIRKTGAEVI-------------VHGkvwdeANQRAKELAKGADTEYVPA--FDHPVLWEGH-STMVD 143
Cdd:PRK10717  93 VMPETQSQEKKDLLRALGAELVlvpaapyanpnnyVKG-----AGRLAEELVASEPNGAIWAnqFDNPANREAHyETTGP 167
                        170
                 ....*....|....*..
gi 517758762 144 EILEDCP-QVDALVTSV 159
Cdd:PRK10717 168 EIWEQTDgKVDGFVCAV 184
PLN02569 PLN02569
threonine synthase
21-147 8.33e-05

threonine synthase


Pssm-ID: 178182 [Multi-domain]  Cd Length: 484  Bit Score: 44.03  E-value: 8.33e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  21 IWLKLENLQPSGSFKLRGMGLLCSQAAEQGKRK-----VVCPSGGNAGLATAVAAANLGLKACIVVPNTTPETtrARIRK 95
Cdd:PLN02569 152 LWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMAkpvvgVGCASTGDTSAALSAYCAAAGIPSIVFLPADKISI--AQLVQ 229
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 517758762  96 ---TGAEVIVHGKVWDEANQRAKELakgadTEYVPAFD----HPVLWEGHSTMVDEILE 147
Cdd:PLN02569 230 piaNGALVLSIDTDFDGCMRLIREV-----TAELPIYLanslNSLRLEGQKTAAIEILQ 283
PRK08206 PRK08206
diaminopropionate ammonia-lyase; Provisional
73-159 3.43e-04

diaminopropionate ammonia-lyase; Provisional


Pssm-ID: 236186  Cd Length: 399  Bit Score: 41.79  E-value: 3.43e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  73 LGLKACIVVPNTTPETTRARIRKTGAEVIVHGKVWDE----ANQRAKElaKG----ADTEYvPAFDHPVLW--EGHSTMV 142
Cdd:PRK08206 138 LGQKAVIYMPKGSSEERVDAIRALGAECIITDGNYDDsvrlAAQEAQE--NGwvvvQDTAW-EGYEEIPTWimQGYGTMA 214
                         90
                 ....*....|....*..
gi 517758762 143 DEILEDCPQVDALVTSV 159
Cdd:PRK08206 215 DEAVEQLKEMGVPPTHV 231
PLN03013 PLN03013
cysteine synthase
21-159 3.65e-03

cysteine synthase


Pssm-ID: 178587 [Multi-domain]  Cd Length: 429  Bit Score: 38.60  E-value: 3.65e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  21 IWLKLENLQPSGSFKLRgMGLLCSQAAEQ------GKRKVVCPSGGNAGLATAVAAANLGLKACIVVPNTTPETTRARIR 94
Cdd:PLN03013 140 IAAKLEIMEPCCSVKDR-IGYSMVTDAEQkgfispGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLK 218
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  95 KTGAEVIVH--GKVWDEANQRAKELAKGADTEY-VPAFDHPVLWEGH-STMVDEILEDCP-QVDALVTSV 159
Cdd:PLN03013 219 AFGAELVLTdpAKGMTGAVQKAEEILKNTPDAYmLQQFDNPANPKIHyETTGPEIWDDTKgKVDIFVAGI 288
PLN00011 PLN00011
cysteine synthase
20-159 3.72e-03

cysteine synthase


Pssm-ID: 177651  Cd Length: 323  Bit Score: 38.45  E-value: 3.72e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  20 RIWLKLENLQPSGSFKLRGMGLLCSQAAEQG-----KRKVVCPSGGNAGLATAVAAANLGLKACIVVPNTTPETTRARIR 94
Cdd:PLN00011  33 RIAAKLEMMEPCSSVKDRIAYSMIKDAEDKGlitpgKSTLIEATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILR 112
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 517758762  95 KTGAEVI-------VHGKVwdeanQRAKELAKGADTEYVP-AFDHPVLWEGH-STMVDEILEDCP-QVDALVTSV 159
Cdd:PLN00011 113 ALGAEVHltdqsigLKGML-----EKAEEILSKTPGGYIPqQFENPANPEIHyRTTGPEIWRDSAgKVDILVAGV 182
PRK06381 PRK06381
threonine synthase; Validated
19-156 5.32e-03

threonine synthase; Validated


Pssm-ID: 235789  Cd Length: 319  Bit Score: 38.15  E-value: 5.32e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  19 RRIWLKLENLQPSGSFKLRGMGLLCSQAAEQGKRKVVCPSGGNAGLATAVAAANLGLKACIVVPNTTPETTRARIRKTGA 98
Cdd:PRK06381  31 RKIYLKFEGANPTGTQKDRIAEAHVRRAMRLGYSGITVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGA 110
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 517758762  99 EVI-VHGKvWDEANQRAKELAKGADT-EYVPAFDHPVL-WEGHSTMVDEILEDCPQVDALV 156
Cdd:PRK06381 111 EIIyVDGK-YEEAVERSRKFAKENGIyDANPGSVNSVVdIEAYSAIAYEIYEALGDVPDAV 170
PLN02556 PLN02556
cysteine synthase/L-3-cyanoalanine synthase
5-159 6.96e-03

cysteine synthase/L-3-cyanoalanine synthase


Pssm-ID: 178171 [Multi-domain]  Cd Length: 368  Bit Score: 37.63  E-value: 6.96e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762   5 RTPLILhpgLSTPTR----RIWLKLENLQPSGSFKLRGMGLLCSQAAEQ-----GKRKVVCPSGGNAGLATAVAAANLGL 75
Cdd:PLN02556  59 KTPLVY---LNKVTEgcgaYIAAKQEMFQPTSSIKDRPALAMIEDAEKKnlitpGKTTLIEPTSGNMGISLAFMAAMKGY 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517758762  76 KACIVVPNTTPETTRARIRKTGAEVIV--HGKVWDEANQRAKELAKGADTEYV-PAFDHPVLWEGH-STMVDEILEDC-P 150
Cdd:PLN02556 136 KMILTMPSYTSLERRVTMRAFGAELVLtdPTKGMGGTVKKAYELLESTPDAFMlQQFSNPANTQVHfETTGPEIWEDTlG 215

                 ....*....
gi 517758762 151 QVDALVTSV 159
Cdd:PLN02556 216 QVDIFVMGI 224
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH