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Conserved domains on  [gi|517999094|ref|WP_019169302|]
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F0F1 ATP synthase subunit epsilon [Staphylococcus intermedius]

Protein Classification

FoF1 ATP synthase subunit epsilon( domain architecture ID 11479057)

FoF1 ATP synthase subunit epsilon is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
atpC PRK00571
F0F1 ATP synthase subunit epsilon; Validated
1-132 8.67e-50

F0F1 ATP synthase subunit epsilon; Validated


:

Pssm-ID: 234796 [Multi-domain]  Cd Length: 135  Bit Score: 155.30  E-value: 8.67e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   1 MNTLTLDIVTPNGSVYkEDNVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTK-DGKSDYIAVTEGFAEIRREKVNIL 79
Cdd:PRK00571   1 MATLTVDIVSPEGLIY-SGEVEEVVVPGTEGELGILPGHAPLLTALKPGVVRIKKdDGEEEVIAVSGGFLEVQPDKVTVL 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 517999094  80 AQAAESADDIDLERAKSAKQRATFYLEGDRNDTDLRRAERALKRAENRIEVAK 132
Cdd:PRK00571  80 ADSAERADDIDEARAEEAKERAEEALENKHDDVDYARAQAALARAIARLRVAE 132
 
Name Accession Description Interval E-value
atpC PRK00571
F0F1 ATP synthase subunit epsilon; Validated
1-132 8.67e-50

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 234796 [Multi-domain]  Cd Length: 135  Bit Score: 155.30  E-value: 8.67e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   1 MNTLTLDIVTPNGSVYkEDNVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTK-DGKSDYIAVTEGFAEIRREKVNIL 79
Cdd:PRK00571   1 MATLTVDIVSPEGLIY-SGEVEEVVVPGTEGELGILPGHAPLLTALKPGVVRIKKdDGEEEVIAVSGGFLEVQPDKVTVL 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 517999094  80 AQAAESADDIDLERAKSAKQRATFYLEGDRNDTDLRRAERALKRAENRIEVAK 132
Cdd:PRK00571  80 ADSAERADDIDEARAEEAKERAEEALENKHDDVDYARAQAALARAIARLRVAE 132
AtpC COG0355
FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP ...
4-132 2.59e-43

FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP synthase, epsilon subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440124 [Multi-domain]  Cd Length: 131  Bit Score: 138.78  E-value: 2.59e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   4 LTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTK-DGKSDYIAVTEGFAEIRREKVNILAQA 82
Cdd:COG0355    1 LKLEIVTPERVLFSGE-VESVVAPGAEGEFGILPGHAPLLTALKPGVVRIRTeDGEEEYFAVSGGFLEVQPNKVTILADT 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 517999094  83 AESADDIDLERAKSAKQRATFYLEGDRNDTDLRRAERALKRAENRIEVAK 132
Cdd:COG0355   80 AERAEDIDVERAEEAKERAEERLEEAKDDIDYARAEAALARALARLRAAE 129
F1-ATPase_delta cd12152
mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, ...
4-126 2.16e-39

mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain. In bacteria, which is lacking a eukaryotic epsilon subunit homolog, this subunit is called the epsilon subunit.


Pssm-ID: 213395 [Multi-domain]  Cd Length: 123  Bit Score: 128.40  E-value: 2.16e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   4 LTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTK-DGKSDYIAVTEGFAEIRREKVNILAQA 82
Cdd:cd12152    1 LKLEIVTPERVFFSGE-VESVVLPGTEGEFGILPGHAPLVTALKPGVLRIRDeDGEEKYFAVSGGFLEVTPNRVTILADE 79
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 517999094  83 AESADDIDLERAKSAKQRATFYLEGDRNDTDLRRAERALKRAEN 126
Cdd:cd12152   80 AERPEDIDVERAEEALERAEERLAQAKDEREKARAEAALERALA 123
ATP_synt_epsi TIGR01216
ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five ...
3-132 6.38e-33

ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five types of subunits in the F1 part of F1/F0 ATP synthases. Members of this family are designated epsilon in bacterial and chloroplast systems but designated delta in mitochondria, where the counterpart of the bacterial delta subunit is designated OSCP. In a few cases (Propionigenium modestum, Acetobacterium woodii) scoring above the trusted cutoff and designated here as exceptions, Na+ replaces H+ for translocation. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273506 [Multi-domain]  Cd Length: 130  Bit Score: 112.35  E-value: 6.38e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094    3 TLTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTKDG-KSDYIAVTEGFAEIRREKVNILAQ 81
Cdd:TIGR01216   1 TLKLEIVTPEGEIYSGE-VESVILPGSEGELGILPGHAPLITALKPGVVRIRKLGdDWEHIAVSGGFAEVQPDKVTILAD 79
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 517999094   82 AAESADDIDLERAKSAKQRATFYLEGDRNDTDLRRAERALKRAENRIEVAK 132
Cdd:TIGR01216  80 GAVFADDIDEAEAEKALEAAEKLLESAEDDKDLAEALLKLKKARAQLEALE 130
ATP-synt_DE_N pfam02823
ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These ...
4-83 3.78e-30

ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (pfam00213).


Pssm-ID: 460714 [Multi-domain]  Cd Length: 80  Bit Score: 103.67  E-value: 3.78e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094    4 LTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKV-TKDGKSDYIAVTEGFAEIRREKVNILAQA 82
Cdd:pfam02823   1 LKLEIVTPERVVFSGE-VEMVVAPGAEGELGILPGHAPLLTALKPGVLRIkTEDGEEEYIAVSGGFLEVQPNKVTILADS 79

                  .
gi 517999094   83 A 83
Cdd:pfam02823  80 A 80
 
Name Accession Description Interval E-value
atpC PRK00571
F0F1 ATP synthase subunit epsilon; Validated
1-132 8.67e-50

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 234796 [Multi-domain]  Cd Length: 135  Bit Score: 155.30  E-value: 8.67e-50
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   1 MNTLTLDIVTPNGSVYkEDNVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTK-DGKSDYIAVTEGFAEIRREKVNIL 79
Cdd:PRK00571   1 MATLTVDIVSPEGLIY-SGEVEEVVVPGTEGELGILPGHAPLLTALKPGVVRIKKdDGEEEVIAVSGGFLEVQPDKVTVL 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 517999094  80 AQAAESADDIDLERAKSAKQRATFYLEGDRNDTDLRRAERALKRAENRIEVAK 132
Cdd:PRK00571  80 ADSAERADDIDEARAEEAKERAEEALENKHDDVDYARAQAALARAIARLRVAE 132
AtpC COG0355
FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP ...
4-132 2.59e-43

FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP synthase, epsilon subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440124 [Multi-domain]  Cd Length: 131  Bit Score: 138.78  E-value: 2.59e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   4 LTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTK-DGKSDYIAVTEGFAEIRREKVNILAQA 82
Cdd:COG0355    1 LKLEIVTPERVLFSGE-VESVVAPGAEGEFGILPGHAPLLTALKPGVVRIRTeDGEEEYFAVSGGFLEVQPNKVTILADT 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|
gi 517999094  83 AESADDIDLERAKSAKQRATFYLEGDRNDTDLRRAERALKRAENRIEVAK 132
Cdd:COG0355   80 AERAEDIDVERAEEAKERAEERLEEAKDDIDYARAEAALARALARLRAAE 129
F1-ATPase_delta cd12152
mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, ...
4-126 2.16e-39

mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain. In bacteria, which is lacking a eukaryotic epsilon subunit homolog, this subunit is called the epsilon subunit.


Pssm-ID: 213395 [Multi-domain]  Cd Length: 123  Bit Score: 128.40  E-value: 2.16e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   4 LTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTK-DGKSDYIAVTEGFAEIRREKVNILAQA 82
Cdd:cd12152    1 LKLEIVTPERVFFSGE-VESVVLPGTEGEFGILPGHAPLVTALKPGVLRIRDeDGEEKYFAVSGGFLEVTPNRVTILADE 79
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....
gi 517999094  83 AESADDIDLERAKSAKQRATFYLEGDRNDTDLRRAERALKRAEN 126
Cdd:cd12152   80 AERPEDIDVERAEEALERAEERLAQAKDEREKARAEAALERALA 123
atpC PRK13446
F0F1 ATP synthase subunit epsilon; Provisional
1-131 4.54e-38

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 184056 [Multi-domain]  Cd Length: 136  Bit Score: 125.45  E-value: 4.54e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   1 MNTLTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTKDGKSDYIAVTEGFAEIRREKVNILA 80
Cdd:PRK13446   2 AKKLKLEIVTPEKKVLSEE-VDEVGAPGVLGEFGVLPGHAPFLTALKIGELTYKKGGKTHYVAVNGGFAEVSNNKVTVLA 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 517999094  81 QAAESADDIDLERAKSAKQRATFYLEGDRNDTDLRRAERALKRAENRIEVA 131
Cdd:PRK13446  81 ETAERAEEIDVERARAALERAEQRLKKLTPEDDSARAEAALERALIRLQVA 131
ATP_synt_epsi TIGR01216
ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five ...
3-132 6.38e-33

ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five types of subunits in the F1 part of F1/F0 ATP synthases. Members of this family are designated epsilon in bacterial and chloroplast systems but designated delta in mitochondria, where the counterpart of the bacterial delta subunit is designated OSCP. In a few cases (Propionigenium modestum, Acetobacterium woodii) scoring above the trusted cutoff and designated here as exceptions, Na+ replaces H+ for translocation. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273506 [Multi-domain]  Cd Length: 130  Bit Score: 112.35  E-value: 6.38e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094    3 TLTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTKDG-KSDYIAVTEGFAEIRREKVNILAQ 81
Cdd:TIGR01216   1 TLKLEIVTPEGEIYSGE-VESVILPGSEGELGILPGHAPLITALKPGVVRIRKLGdDWEHIAVSGGFAEVQPDKVTILAD 79
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 517999094   82 AAESADDIDLERAKSAKQRATFYLEGDRNDTDLRRAERALKRAENRIEVAK 132
Cdd:TIGR01216  80 GAVFADDIDEAEAEKALEAAEKLLESAEDDKDLAEALLKLKKARAQLEALE 130
ATP-synt_DE_N pfam02823
ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These ...
4-83 3.78e-30

ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (pfam00213).


Pssm-ID: 460714 [Multi-domain]  Cd Length: 80  Bit Score: 103.67  E-value: 3.78e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094    4 LTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKV-TKDGKSDYIAVTEGFAEIRREKVNILAQA 82
Cdd:pfam02823   1 LKLEIVTPERVVFSGE-VEMVVAPGAEGELGILPGHAPLLTALKPGVLRIkTEDGEEEYIAVSGGFLEVQPNKVTILADS 79

                  .
gi 517999094   83 A 83
Cdd:pfam02823  80 A 80
atpE CHL00063
ATP synthase CF1 epsilon subunit
3-133 5.35e-24

ATP synthase CF1 epsilon subunit


Pssm-ID: 214351 [Multi-domain]  Cd Length: 134  Bit Score: 89.54  E-value: 5.35e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   3 TLTLDIVTPNGSVYkEDNVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTKDGKSDYIAVTEGFAEIRREKVNILAQA 82
Cdd:CHL00063   2 TLNLRVLTPNRIVW-DSEVEEIILPTNSGQIGVLPNHAPIATALDIGVLRIRLNDQWLTMALMGGFARIGNNEITILVND 80
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 517999094  83 AESADDIDLERAKSAKQRATFYLEGDRNDTDLRRAERALKRAENRIEVAKY 133
Cdd:CHL00063  81 AEKGSDIDPQEAQQTLEIAEANLEKAEGKKQKIEANLALKRARARVEAINA 131
atpC PRK13450
F0F1 ATP synthase subunit epsilon; Provisional
1-132 2.46e-21

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 184059 [Multi-domain]  Cd Length: 132  Bit Score: 82.89  E-value: 2.46e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   1 MNTLTLDIVTPNgSVYKEDNVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVK-VTKDGKSDYIAVTEGFAEIRREKVNIL 79
Cdd:PRK13450   1 ANNIKLTILTPE-KNFYIGEVKEVITEGLDGDIAILPNHVPLITYLKPTITKiIDENGEKKKIFTSSGVLKVENNEVYIL 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 517999094  80 AQAAESADDIDLERAKSAKQRATFYLEgDRNDTDLRRAERALKRAENRIEVAK 132
Cdd:PRK13450  80 CDASEWPEEIDIKRAENAKKRAEERLR-KKDEIDVKRAELALFRAIARIKLKE 131
atpC PRK14735
F0F1 ATP synthase subunit epsilon; Provisional
6-134 6.58e-20

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 173197 [Multi-domain]  Cd Length: 139  Bit Score: 79.27  E-value: 6.58e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   6 LDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTKDGKSDYIAVTEGFAEIRREKVNILAQAAES 85
Cdd:PRK14735   5 LEIVTAERVVLSDD-VDMISAPTKDGRVGILPRHAPLLTILEPGELDIVKNGVRTPFAISGGFMEVLPHRVTILADTAER 83
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 517999094  86 ADDIDLERAKSAKQRATFYLEGDRNDTDLRRAERALKRAENRIEVAKYK 134
Cdd:PRK14735  84 ADEIDEARAEQARAEAEQRRRERQSEQDLALAEAKLRRAMVRLRVAQLH 132
atpC PRK13452
F0F1 ATP synthase subunit epsilon; Provisional
4-129 2.60e-15

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 106409 [Multi-domain]  Cd Length: 145  Bit Score: 67.85  E-value: 2.60e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   4 LTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTKDGKSDYIAVTEGFAEIRREKVNILAQAA 83
Cdd:PRK13452   6 LKVDVVSPLGSVFKGE-ADMVSLRGSAGEMGIAYGHTELLSTLPAGVVNVRKDQHTDVLYVSGGIVEVTPTRVTIMVDDM 84
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*..
gi 517999094  84 ESADDIDLERAKSAKQRATFYLEG-DRNDTDLRRAERALKRAENRIE 129
Cdd:PRK13452  85 ERAENLNQAEAEKARARAKEVLKNpDASKLDIEAANKRLKEADARLK 131
atpC PRK13448
F0F1 ATP synthase subunit epsilon; Provisional
1-93 2.27e-11

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 139579 [Multi-domain]  Cd Length: 135  Bit Score: 57.09  E-value: 2.27e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   1 MNTLTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTKDGKSDYIAVTEGFAEIRREKVNILA 80
Cdd:PRK13448   1 MATFHFDLVSPEKLAFSGE-VDQVDIPGVEGDFGVLAGHAPVVAVIRPGILTVTAGGNQQKIVVLGGLAEVSEKGLTVLA 79
                         90
                 ....*....|...
gi 517999094  81 QAAESADDIDLER 93
Cdd:PRK13448  80 DVATSVADLDLAQ 92
atpC PRK13442
F0F1 ATP synthase subunit epsilon; Provisional
1-87 2.77e-11

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 184055 [Multi-domain]  Cd Length: 89  Bit Score: 55.79  E-value: 2.77e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   1 MNTLTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTK-DGKSDYIAVTEGFAEIRREKVNIL 79
Cdd:PRK13442   3 GATLHVNIVAADRPVWSGE-ATMVVARTTEGDIGILPGHEPLLGVLESGTVTVVTpGGERISAAVDGGFISFDSNKLTVL 81

                 ....*...
gi 517999094  80 AQAAESAD 87
Cdd:PRK13442  82 AERAELVA 89
atpC PRK13449
ATP synthase F1 subunit epsilon;
1-86 3.15e-11

ATP synthase F1 subunit epsilon;


Pssm-ID: 184058 [Multi-domain]  Cd Length: 88  Bit Score: 55.55  E-value: 3.15e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   1 MNTLTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKV--TKDGKSDYIAVTEGFAEIRREKVNI 78
Cdd:PRK13449   1 MAKLHFELVTPERLLRSGE-VDMVVVPGTEGDFGVLAGHAPFMTTLREGEVTVysSDGAAPEVFHVQGGFAEVNEKGLTI 79

                 ....*...
gi 517999094  79 LAQAAESA 86
Cdd:PRK13449  80 LAEHAVEA 87
atpC PRK14736
F0F1 ATP synthase subunit epsilon; Provisional
1-132 3.33e-10

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 173198 [Multi-domain]  Cd Length: 133  Bit Score: 54.03  E-value: 3.33e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   1 MNTLTLDIVTPNGSVYKEDnVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTK-DGKSDYIAVTEGFAEIRREKVNIL 79
Cdd:PRK14736   1 MATFHFDLVGPERTLYSGE-VEAVQLPGSEGEMTVLPGHAPVLTTLKVGVITVTEtTGNGKRIYVRGGFAEIGPTSVTVL 79
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 517999094  80 AQAAESADDIDLERAksakQRATFYLEGDRNDTDLRRAERALKRAENRIEVAK 132
Cdd:PRK14736  80 AERAAPVEELTPEMI----DREIEAVEMERDATQDLDKREALNAQIVQMQEAK 128
atpC PRK13451
F0F1 ATP synthase subunit epsilon; Provisional
4-101 7.13e-10

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 172059  Cd Length: 101  Bit Score: 52.48  E-value: 7.13e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   4 LTLDIVTPNGSVYkEDNVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTKDGKSDYIAVTEGFAEIRREKVNILAQAA 83
Cdd:PRK13451   1 MKVKIVTPYGIVY-DRESDFVSFRTVEGEMGILPRRAPIIAKLSVCDVKIKSGDDEYEYKVADGFLHCDGKNVIIITEEA 79
                         90
                 ....*....|....*...
gi 517999094  84 ESADDIDLERAKSAKQRA 101
Cdd:PRK13451  80 GREEEISPHRYLGARERV 97
atpC PRK13443
F0F1 ATP synthase subunit epsilon; Provisional
2-89 2.33e-09

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 237388 [Multi-domain]  Cd Length: 136  Bit Score: 51.85  E-value: 2.33e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   2 NTLTLDIVTPNGSVyKEDNVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKV-TKDGKSDYiAVTEGFAEIRREKVNILA 80
Cdd:PRK13443   3 GTLQFDLVSPERRL-ASFQATAVQIPGADGDMTAMEGHAPTITTLRPGILRAhGPSGTQEY-AVTGGFAEINATSISVLA 80

                 ....*....
gi 517999094  81 QAAESADDI 89
Cdd:PRK13443  81 EKAIPVEEL 89
ATP-synt_DE pfam00401
ATP synthase, Delta/Epsilon chain, long alpha-helix domain; Part of the ATP synthase CF(1). ...
87-130 2.91e-07

ATP synthase, Delta/Epsilon chain, long alpha-helix domain; Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. This subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (pfam00213).


Pssm-ID: 459802  Cd Length: 45  Bit Score: 44.29  E-value: 2.91e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 517999094   87 DDIDLERAKSAKQRATFYL-EGDRNDTDLRRAERALKRAENRIEV 130
Cdd:pfam00401   1 EDIDVARAEEAKERAEERLaQAKQDDIDYARAQAALARALARLQA 45
atpC PRK01474
F0F1 ATP synthase subunit epsilon; Validated
1-83 2.39e-03

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 100879  Cd Length: 112  Bit Score: 35.23  E-value: 2.39e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 517999094   1 MN-TLTLDIVTPNgSVYKEDNVEIVVLQTTAGEMGVMYGHIPTVTPLRIGHVKVTKDG----KSDYIaVTEGFAEIRREK 75
Cdd:PRK01474   1 MNeTILVKIITPL-SIAFEKQAKMVTMPGEEGMFGVLPSHVPMIVSLKAGLVQVYIDDmhksENTYL-ISGGVTEVTGNY 78

                 ....*...
gi 517999094  76 VNILAQAA 83
Cdd:PRK01474  79 INIATETA 86
PRK06228 PRK06228
F0F1 ATP synthase subunit epsilon; Validated
4-67 8.73e-03

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 235750 [Multi-domain]  Cd Length: 131  Bit Score: 34.14  E-value: 8.73e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 517999094   4 LTLDIVTPNGSVYKEDNVEIVVLQTTAGEMGVMYGHIPTVTPLRIG-HVKVTKDGKSDYIAVTEG 67
Cdd:PRK06228   3 MNLKILLPFEVFAEKKGVTRIVAETREGSFGLLPHRLDCVAALVPGiLVYETEAEGEVYVAVDEG 67
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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