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Conserved domains on  [gi|518161937|ref|WP_019332145|]
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DMT family transporter [Pseudomonas syringae]

Protein Classification

DMT family transporter( domain architecture ID 11430850)

DMT (drug/metabolite transporter) family transporter is an inner membrane protein involved in the transport of one or more of a variety of substrates such as amino acids, drugs, metabolites, and sugar phosphates, among others

Gene Ontology:  GO:0016020|GO:0055085|GO:0022857
PubMed:  11432728
TCDB:  2.A.7

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
RhaT COG0697
Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and ...
12-289 6.11e-30

Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only];


:

Pssm-ID: 440461 [Multi-domain]  Cd Length: 290  Bit Score: 114.94  E-value: 6.11e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937  12 KAEAVLILITMLWGGTFLLVQHAMTVSGPMFFVGLRFAAAALIVALFSL---KVLRGLTFLELKAGVFIG-TSIMLGYGL 87
Cdd:COG0697    3 RGILLLLLAALLWGSSFVAIKLALAGLPPLQLAFLRFLLAALLLLPLLLlrgRRLPPLSRRDWLLLLLRGlLGLALAFLL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937  88 QTVGLQTIPSSQSAFITAFYVPCVPLLQWLVLGRRPGLMPTLGIILAFTGLMLVSGSQGAVLNLSS-GEIMTLISTVAIA 166
Cdd:COG0697   83 FFLALQYTPAALAALLLALAPLFVALLAALLLGERLSRRRWLGLLLGFAGVLLIVGPGGGGGGGSLlGDLLALLAALSWA 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937 167 AEIIMISAYAGKVDVRRVTVVQLATASILAFLMIVPIQERLPdFSWLLVVSAVGLGLMSAAI-QIAMNWAQKSVSPTRAT 245
Cdd:COG0697  163 LYTVLTRRLSRRLDPLTLTFWQMLVGALLLLPLALLTGLPLP-LSAAAWLALLYLGLFGTALaYLLWFRALRRLGASRAA 241
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 518161937 246 VIYAGEPVWAGVVGRLA-GERLPGIALLGAALIVAGVIVSEMKRR 289
Cdd:COG0697  242 PLTYLEPVFAVLLGWLLlGEPLTPLQLLGAALILAGVLLAALRER 286
 
Name Accession Description Interval E-value
RhaT COG0697
Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and ...
12-289 6.11e-30

Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only];


Pssm-ID: 440461 [Multi-domain]  Cd Length: 290  Bit Score: 114.94  E-value: 6.11e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937  12 KAEAVLILITMLWGGTFLLVQHAMTVSGPMFFVGLRFAAAALIVALFSL---KVLRGLTFLELKAGVFIG-TSIMLGYGL 87
Cdd:COG0697    3 RGILLLLLAALLWGSSFVAIKLALAGLPPLQLAFLRFLLAALLLLPLLLlrgRRLPPLSRRDWLLLLLRGlLGLALAFLL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937  88 QTVGLQTIPSSQSAFITAFYVPCVPLLQWLVLGRRPGLMPTLGIILAFTGLMLVSGSQGAVLNLSS-GEIMTLISTVAIA 166
Cdd:COG0697   83 FFLALQYTPAALAALLLALAPLFVALLAALLLGERLSRRRWLGLLLGFAGVLLIVGPGGGGGGGSLlGDLLALLAALSWA 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937 167 AEIIMISAYAGKVDVRRVTVVQLATASILAFLMIVPIQERLPdFSWLLVVSAVGLGLMSAAI-QIAMNWAQKSVSPTRAT 245
Cdd:COG0697  163 LYTVLTRRLSRRLDPLTLTFWQMLVGALLLLPLALLTGLPLP-LSAAAWLALLYLGLFGTALaYLLWFRALRRLGASRAA 241
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 518161937 246 VIYAGEPVWAGVVGRLA-GERLPGIALLGAALIVAGVIVSEMKRR 289
Cdd:COG0697  242 PLTYLEPVFAVLLGWLLlGEPLTPLQLLGAALILAGVLLAALRER 286
EamA pfam00892
EamA-like transporter family; This family includes many hypothetical membrane proteins of ...
12-142 1.86e-08

EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.


Pssm-ID: 307170  Cd Length: 136  Bit Score: 52.20  E-value: 1.86e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937   12 KAEAVLILITMLWGGTFLLVQHAMTVSGPMFFVGLRFAAAALIVALFSLKVLRGLTFL---ELKAGVFIGTSIMLGYGLQ 88
Cdd:pfam00892   2 KGILLALLAALIWAIYFVFSKILLRRISPLTLTFWRFLIAGILLLPFALFTGGKLVIPlksWLALLYLGVLGTFLGFLLY 81
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 518161937   89 TVGLQTIPSSQSAFITAFYVPCVPLLQWLVLGRRPGLMPTLGIILAFTGLMLVS 142
Cdd:pfam00892  82 FYGLKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLILLGVLLIL 135
 
Name Accession Description Interval E-value
RhaT COG0697
Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and ...
12-289 6.11e-30

Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only];


Pssm-ID: 440461 [Multi-domain]  Cd Length: 290  Bit Score: 114.94  E-value: 6.11e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937  12 KAEAVLILITMLWGGTFLLVQHAMTVSGPMFFVGLRFAAAALIVALFSL---KVLRGLTFLELKAGVFIG-TSIMLGYGL 87
Cdd:COG0697    3 RGILLLLLAALLWGSSFVAIKLALAGLPPLQLAFLRFLLAALLLLPLLLlrgRRLPPLSRRDWLLLLLRGlLGLALAFLL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937  88 QTVGLQTIPSSQSAFITAFYVPCVPLLQWLVLGRRPGLMPTLGIILAFTGLMLVSGSQGAVLNLSS-GEIMTLISTVAIA 166
Cdd:COG0697   83 FFLALQYTPAALAALLLALAPLFVALLAALLLGERLSRRRWLGLLLGFAGVLLIVGPGGGGGGGSLlGDLLALLAALSWA 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937 167 AEIIMISAYAGKVDVRRVTVVQLATASILAFLMIVPIQERLPdFSWLLVVSAVGLGLMSAAI-QIAMNWAQKSVSPTRAT 245
Cdd:COG0697  163 LYTVLTRRLSRRLDPLTLTFWQMLVGALLLLPLALLTGLPLP-LSAAAWLALLYLGLFGTALaYLLWFRALRRLGASRAA 241
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 518161937 246 VIYAGEPVWAGVVGRLA-GERLPGIALLGAALIVAGVIVSEMKRR 289
Cdd:COG0697  242 PLTYLEPVFAVLLGWLLlGEPLTPLQLLGAALILAGVLLAALRER 286
EamA pfam00892
EamA-like transporter family; This family includes many hypothetical membrane proteins of ...
12-142 1.86e-08

EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.


Pssm-ID: 307170  Cd Length: 136  Bit Score: 52.20  E-value: 1.86e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937   12 KAEAVLILITMLWGGTFLLVQHAMTVSGPMFFVGLRFAAAALIVALFSLKVLRGLTFL---ELKAGVFIGTSIMLGYGLQ 88
Cdd:pfam00892   2 KGILLALLAALIWAIYFVFSKILLRRISPLTLTFWRFLIAGILLLPFALFTGGKLVIPlksWLALLYLGVLGTFLGFLLY 81
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 518161937   89 TVGLQTIPSSQSAFITAFYVPCVPLLQWLVLGRRPGLMPTLGIILAFTGLMLVS 142
Cdd:pfam00892  82 FYGLKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLILLGVLLIL 135
RhtA COG5006
Threonine/homoserine efflux transporter RhtA [Amino acid transport and metabolism];
16-289 4.59e-06

Threonine/homoserine efflux transporter RhtA [Amino acid transport and metabolism];


Pssm-ID: 444030 [Multi-domain]  Cd Length: 290  Bit Score: 47.12  E-value: 4.59e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937  16 VLILITML-WGGTFLLVQHAMTVSGPMFFVGLRFAAAALIVALFSLKVLRGLTFLELKAGVFIGTSIMLGYGLQTVGLQT 94
Cdd:COG5006   12 LLVLLSALsVQLGAALAKLLFPGVGPLGVTALRLAFAALILLLIFRPWRRRLTRRDWLALLLYGVALAGMNLLFYLAIAR 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937  95 IPSSQSAFITAFYvpcvPLLQWLVLGRRPGLMptLGIILAFTGLMLVSGSQGAVLNLSS-GEIMTLISTVAIAAEIIMIS 173
Cdd:COG5006   92 IPLGIAVALEFLG----PLAVALLGSRRRRDL--LWVALALAGVVLLLPVGLSGGSLDPvGVLFALGAAACWALYILLGR 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937 174 AYAGKVD-VRRVTVVQLATASILAFLMIVPIQERLPDFSWLLVvsAVGLGLMSAAI-----QIAMnwaqKSVSPTRATVI 247
Cdd:COG5006  166 RVGARLPgLTGLALGMLVAALVLLPFGLPTAGPALLDPPVLLL--GLGVAVLSSVLpysleMVAL----RRLPARTFGIL 239
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|...
gi 518161937 248 YAGEPVWAGVVGRLA-GERLPGIALLGAALIVAGVIVSEMKRR 289
Cdd:COG5006  240 MSLEPAVAALAGWLVlGEVLTPLQWLGIALVVAASAGATLTAR 282
EamA pfam00892
EamA-like transporter family; This family includes many hypothetical membrane proteins of ...
153-283 7.66e-06

EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.


Pssm-ID: 307170  Cd Length: 136  Bit Score: 44.88  E-value: 7.66e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518161937  153 SGEIMTLISTVAIAAEIIMISAYAGKVDVRRVTVVQLATASILaFLMIVPIQERLPDFSWLLVVSAVGLGLMSAAI-QIA 231
Cdd:pfam00892   2 KGILLALLAALIWAIYFVFSKILLRRISPLTLTFWRFLIAGIL-LLPFALFTGGKLVIPLKSWLALLYLGVLGTFLgFLL 80
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 518161937  232 MNWAQKSVSPTRATVIYAGEPVWAGVVGRLA-GERLPGIALLGAALIVAGVIV 283
Cdd:pfam00892  81 YFYGLKYVSASNASVITSLSPVFTLILSVLLlGEKLTLKQLLGIVLILLGVLL 133
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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