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Conserved domains on  [gi|518172500|ref|WP_019342708|]
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PA2779 family protein, partial [Stutzerimonas stutzeri]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PA2779_fam NF033919
PA2779 family protein; Homologs of PA2779, an uncharacterized protein, average about 130 amino ...
 9-101 2.58e-25

PA2779 family protein; Homologs of PA2779, an uncharacterized protein, average about 130 amino acids in length. The most distinctive feature is an extremely hydrophobic region at or near the C-terminus, consisting almost entirely of the bulkier hydrophobic residues Val, Ile, Leu, and Phe. The function is unknown.


:

Pssm-ID: 468244  Cd Length: 123  Bit Score: 91.45  E-value: 2.58e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172500   9 RVASLLAVMHFMLFAQIPLAQAA-MIGTPEIIADQQQQVDRQQLLTMLEDEDVQKKLVAMGVERDQVEQRINSLTPAELS 87
Cdd:NF033919   1 RLAALLAALLLLLGLPPSPAQAAmMIGTDQVIQQQQAQADRAQLLAFLERKDVQQQLAALGVSPEEAEARVAALTDAELA 80

                         90
                 ....*....|....
gi 518172500  88 QFNQQLDQAPAGAG 101
Cdd:NF033919  81 QLAQQIDELPAGGG 94
 
Name Accession Description Interval E-value
PA2779_fam NF033919
PA2779 family protein; Homologs of PA2779, an uncharacterized protein, average about 130 amino ...
 9-101 2.58e-25

PA2779 family protein; Homologs of PA2779, an uncharacterized protein, average about 130 amino acids in length. The most distinctive feature is an extremely hydrophobic region at or near the C-terminus, consisting almost entirely of the bulkier hydrophobic residues Val, Ile, Leu, and Phe. The function is unknown.


Pssm-ID: 468244  Cd Length: 123  Bit Score: 91.45  E-value: 2.58e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172500   9 RVASLLAVMHFMLFAQIPLAQAA-MIGTPEIIADQQQQVDRQQLLTMLEDEDVQKKLVAMGVERDQVEQRINSLTPAELS 87
Cdd:NF033919   1 RLAALLAALLLLLGLPPSPAQAAmMIGTDQVIQQQQAQADRAQLLAFLERKDVQQQLAALGVSPEEAEARVAALTDAELA 80

                         90
                 ....*....|....
gi 518172500  88 QFNQQLDQAPAGAG 101
Cdd:NF033919  81 QLAQQIDELPAGGG 94
DUF6627 pfam20332
Family of unknown function (DUF6627); This family of proteins is functionally uncharacterized. ...
 8-100 6.66e-21

Family of unknown function (DUF6627); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 130 amino acids in length.


Pssm-ID: 466482  Cd Length: 125  Bit Score: 80.26  E-value: 6.66e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172500    8 KRVASLLAVMHFMLFAQIPlAQAAMIGTPEIIADQQQQVDRQQLLTMLEDEDVQKKLVAMGVERDQVEQRINSLTPAELS 87
Cdd:pfam20332   1 QRLIALLCILALFGASTSP-AQASMISTDQVIASEQAQVDRAQLLSTLDRDDVQQQLTAMGVDPAQAAERVNRMTDQEVA 79

                          90
                  ....*....|...
gi 518172500   88 QFNQQLDQAPAGA 100
Cdd:pfam20332  80 QLNERLEDLPAGA 92
 
Name Accession Description Interval E-value
PA2779_fam NF033919
PA2779 family protein; Homologs of PA2779, an uncharacterized protein, average about 130 amino ...
 9-101 2.58e-25

PA2779 family protein; Homologs of PA2779, an uncharacterized protein, average about 130 amino acids in length. The most distinctive feature is an extremely hydrophobic region at or near the C-terminus, consisting almost entirely of the bulkier hydrophobic residues Val, Ile, Leu, and Phe. The function is unknown.


Pssm-ID: 468244  Cd Length: 123  Bit Score: 91.45  E-value: 2.58e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172500   9 RVASLLAVMHFMLFAQIPLAQAA-MIGTPEIIADQQQQVDRQQLLTMLEDEDVQKKLVAMGVERDQVEQRINSLTPAELS 87
Cdd:NF033919   1 RLAALLAALLLLLGLPPSPAQAAmMIGTDQVIQQQQAQADRAQLLAFLERKDVQQQLAALGVSPEEAEARVAALTDAELA 80

                         90
                 ....*....|....
gi 518172500  88 QFNQQLDQAPAGAG 101
Cdd:NF033919  81 QLAQQIDELPAGGG 94
DUF6627 pfam20332
Family of unknown function (DUF6627); This family of proteins is functionally uncharacterized. ...
 8-100 6.66e-21

Family of unknown function (DUF6627); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are approximately 130 amino acids in length.


Pssm-ID: 466482  Cd Length: 125  Bit Score: 80.26  E-value: 6.66e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518172500    8 KRVASLLAVMHFMLFAQIPlAQAAMIGTPEIIADQQQQVDRQQLLTMLEDEDVQKKLVAMGVERDQVEQRINSLTPAELS 87
Cdd:pfam20332   1 QRLIALLCILALFGASTSP-AQASMISTDQVIASEQAQVDRAQLLSTLDRDDVQQQLTAMGVDPAQAAERVNRMTDQEVA 79

                          90
                  ....*....|...
gi 518172500   88 QFNQQLDQAPAGA 100
Cdd:pfam20332  80 QLNERLEDLPAGA 92
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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