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Conserved domains on  [gi|518343079|ref|WP_019513286|]
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MULTISPECIES: thiazole synthase [Mycobacteriaceae]

Protein Classification

thiazole synthase( domain architecture ID 18578739)

thiazole synthase (ThiG) catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine

EC:  2.8.1.10
Gene Ontology:  GO:1990107

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ThiG COG2022
Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis) [Coenzyme transport and ...
1-250 7.30e-147

Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis) [Coenzyme transport and metabolism]; Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis) is part of the Pathway/BioSystem: Thiamine biosynthesis


:

Pssm-ID: 441625  Cd Length: 259  Bit Score: 410.58  E-value: 7.30e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079   1 MADATLSIAGREFGSRLIMGTGGAANLAVLEEALIASGTELTTVAMRRVDAETGTG--VLDLLNRLGIATLPNTAGCRGA 78
Cdd:COG2022    1 MMDDPLVIAGRTFSSRLLLGTGKYPSPEVMREAIEASGAEIVTVALRRVNLQDPGGdnLLDYLDPLGVTLLPNTAGCRTA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  79 AEAVLTAQLAREALGTDWVKLEVIADERTLLPDAIELVRAAEQLVDDGFIVLPYTNDDPVLARRLEDTGCAAVMPLGSPI 158
Cdd:COG2022   81 EEAVRTARLAREALGTDWVKLEVIGDPKTLLPDPIETLKAAEILVKEGFVVLPYTTDDPVLAKRLEDAGCAAVMPLGAPI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 159 GTGLGISNPHHIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTRAADPATMASAMASAVTAGYLARQAGR 238
Cdd:COG2022  161 GSGLGLLNPYNLRIIIEQADVPVIVDAGIGTPSDAAEAMELGADAVLLNTAIARAGDPVAMARAFKLAVEAGRLAYLAGR 240
                        250
                 ....*....|..
gi 518343079 239 IPKRFWAQASSP 250
Cdd:COG2022  241 MPKRDYASASSP 252
 
Name Accession Description Interval E-value
ThiG COG2022
Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis) [Coenzyme transport and ...
1-250 7.30e-147

Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis) [Coenzyme transport and metabolism]; Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis) is part of the Pathway/BioSystem: Thiamine biosynthesis


Pssm-ID: 441625  Cd Length: 259  Bit Score: 410.58  E-value: 7.30e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079   1 MADATLSIAGREFGSRLIMGTGGAANLAVLEEALIASGTELTTVAMRRVDAETGTG--VLDLLNRLGIATLPNTAGCRGA 78
Cdd:COG2022    1 MMDDPLVIAGRTFSSRLLLGTGKYPSPEVMREAIEASGAEIVTVALRRVNLQDPGGdnLLDYLDPLGVTLLPNTAGCRTA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  79 AEAVLTAQLAREALGTDWVKLEVIADERTLLPDAIELVRAAEQLVDDGFIVLPYTNDDPVLARRLEDTGCAAVMPLGSPI 158
Cdd:COG2022   81 EEAVRTARLAREALGTDWVKLEVIGDPKTLLPDPIETLKAAEILVKEGFVVLPYTTDDPVLAKRLEDAGCAAVMPLGAPI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 159 GTGLGISNPHHIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTRAADPATMASAMASAVTAGYLARQAGR 238
Cdd:COG2022  161 GSGLGLLNPYNLRIIIEQADVPVIVDAGIGTPSDAAEAMELGADAVLLNTAIARAGDPVAMARAFKLAVEAGRLAYLAGR 240
                        250
                 ....*....|..
gi 518343079 239 IPKRFWAQASSP 250
Cdd:COG2022  241 MPKRDYASASSP 252
thiG PRK00208
thiazole synthase; Reviewed
5-250 3.52e-144

thiazole synthase; Reviewed


Pssm-ID: 234687  Cd Length: 250  Bit Score: 403.29  E-value: 3.52e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079   5 TLSIAGREFGSRLIMGTGGAANLAVLEEALIASGTELTTVAMRRVDAE-TGTGVLDLLNRLGIATLPNTAGCRGAAEAVL 83
Cdd:PRK00208   1 MLTIAGKTFSSRLLLGTGKYPSPQVMQEAIEASGAEIVTVALRRVNLGqGGDNLLDLLPPLGVTLLPNTAGCRTAEEAVR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  84 TAQLAREALGTDWVKLEVIADERTLLPDAIELVRAAEQLVDDGFIVLPYTNDDPVLARRLEDTGCAAVMPLGSPIGTGLG 163
Cdd:PRK00208  81 TARLAREALGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEAGCAAVMPLGAPIGSGLG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 164 ISNPHHIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTRAADPATMASAMASAVTAGYLARQAGRIPKRF 243
Cdd:PRK00208 161 LLNPYNLRIIIEQADVPVIVDAGIGTPSDAAQAMELGADAVLLNTAIAVAGDPVAMARAFKLAVEAGRLAYLAGRIPKRD 240

                 ....*..
gi 518343079 244 WAQASSP 250
Cdd:PRK00208 241 YASASSP 247
ThiG pfam05690
Thiazole biosynthesis protein ThiG; This family consists of several bacterial thiazole ...
8-250 7.43e-129

Thiazole biosynthesis protein ThiG; This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway. This family also includes triosephosphate isomerase and pyridoxal 5'-phosphate synthase subunit PdxS.


Pssm-ID: 428589  Cd Length: 247  Bit Score: 364.65  E-value: 7.43e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079    8 IAGREFGSRLIMGTGGAANLAVLEEALIASGTELTTVAMRRVDAET---GTGVLDLLNRLGIATLPNTAGCRGAAEAVLT 84
Cdd:pfam05690   2 IGGKTFDSRLILGTGKYPSLEVLKEALRASGAQIVTVALRRVNLGAkpgGDNILDLLPPKGITLLPNTAGCRTAEEAVRT 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079   85 AQLAREALGTDWVKLEVIADERTLLPDAIELVRAAEQLVDDGFIVLPYTNDDPVLARRLEDTGCAAVMPLGSPIGTGLGI 164
Cdd:pfam05690  82 ARLAREALGTNWIKLEVIGDEKTLLPDPVETLKAAEILVKEGFIVLPYTSDDPVLARRLEEAGCAAVMPLGAPIGSGLGL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  165 SNPHHIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTRAADPATMASAMASAVTAGYLARQAGRIPKRFW 244
Cdd:pfam05690 162 LNPYNLKIIIEEADVPVIVDAGIGTPSDAAQAMELGADAVLLNTAIARAKDPVAMARAFKLAVEAGRLAYLAGRMPRRDY 241

                  ....*.
gi 518343079  245 AQASSP 250
Cdd:pfam05690 242 ASASSP 247
ThiG cd04728
Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the ...
6-250 4.81e-128

Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).


Pssm-ID: 240079  Cd Length: 248  Bit Score: 362.58  E-value: 4.81e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079   6 LSIAGREFGSRLIMGTGGAANLAVLEEALIASGTELTTVAMRRVDAE--TGTGVLDLLNRLGIATLPNTAGCRGAAEAVL 83
Cdd:cd04728    1 LTIGGKTFSSRLLLGTGKYPSPAIMKEAIEASGAEIVTVALRRVNIGdpGGESFLDLLDKSGYTLLPNTAGCRTAEEAVR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  84 TAQLAREALGTDWVKLEVIADERTLLPDAIELVRAAEQLVDDGFIVLPYTNDDPVLARRLEDTGCAAVMPLGSPIGTGLG 163
Cdd:cd04728   81 TARLAREALGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDAGCAAVMPLGSPIGSGQG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 164 ISNPHHIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTRAADPATMASAMASAVTAGYLARQAGRIPKRF 243
Cdd:cd04728  161 LLNPYNLRIIIERADVPVIVDAGIGTPSDAAQAMELGADAVLLNTAIAKAKDPVAMARAFKLAVEAGRLAYLAGRMPKRD 240

                 ....*..
gi 518343079 244 WAQASSP 250
Cdd:cd04728  241 YASASSP 247
 
Name Accession Description Interval E-value
ThiG COG2022
Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis) [Coenzyme transport and ...
1-250 7.30e-147

Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis) [Coenzyme transport and metabolism]; Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis) is part of the Pathway/BioSystem: Thiamine biosynthesis


Pssm-ID: 441625  Cd Length: 259  Bit Score: 410.58  E-value: 7.30e-147
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079   1 MADATLSIAGREFGSRLIMGTGGAANLAVLEEALIASGTELTTVAMRRVDAETGTG--VLDLLNRLGIATLPNTAGCRGA 78
Cdd:COG2022    1 MMDDPLVIAGRTFSSRLLLGTGKYPSPEVMREAIEASGAEIVTVALRRVNLQDPGGdnLLDYLDPLGVTLLPNTAGCRTA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  79 AEAVLTAQLAREALGTDWVKLEVIADERTLLPDAIELVRAAEQLVDDGFIVLPYTNDDPVLARRLEDTGCAAVMPLGSPI 158
Cdd:COG2022   81 EEAVRTARLAREALGTDWVKLEVIGDPKTLLPDPIETLKAAEILVKEGFVVLPYTTDDPVLAKRLEDAGCAAVMPLGAPI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 159 GTGLGISNPHHIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTRAADPATMASAMASAVTAGYLARQAGR 238
Cdd:COG2022  161 GSGLGLLNPYNLRIIIEQADVPVIVDAGIGTPSDAAEAMELGADAVLLNTAIARAGDPVAMARAFKLAVEAGRLAYLAGR 240
                        250
                 ....*....|..
gi 518343079 239 IPKRFWAQASSP 250
Cdd:COG2022  241 MPKRDYASASSP 252
thiG PRK00208
thiazole synthase; Reviewed
5-250 3.52e-144

thiazole synthase; Reviewed


Pssm-ID: 234687  Cd Length: 250  Bit Score: 403.29  E-value: 3.52e-144
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079   5 TLSIAGREFGSRLIMGTGGAANLAVLEEALIASGTELTTVAMRRVDAE-TGTGVLDLLNRLGIATLPNTAGCRGAAEAVL 83
Cdd:PRK00208   1 MLTIAGKTFSSRLLLGTGKYPSPQVMQEAIEASGAEIVTVALRRVNLGqGGDNLLDLLPPLGVTLLPNTAGCRTAEEAVR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  84 TAQLAREALGTDWVKLEVIADERTLLPDAIELVRAAEQLVDDGFIVLPYTNDDPVLARRLEDTGCAAVMPLGSPIGTGLG 163
Cdd:PRK00208  81 TARLAREALGTNWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLAKRLEEAGCAAVMPLGAPIGSGLG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 164 ISNPHHIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTRAADPATMASAMASAVTAGYLARQAGRIPKRF 243
Cdd:PRK00208 161 LLNPYNLRIIIEQADVPVIVDAGIGTPSDAAQAMELGADAVLLNTAIAVAGDPVAMARAFKLAVEAGRLAYLAGRIPKRD 240

                 ....*..
gi 518343079 244 WAQASSP 250
Cdd:PRK00208 241 YASASSP 247
ThiG pfam05690
Thiazole biosynthesis protein ThiG; This family consists of several bacterial thiazole ...
8-250 7.43e-129

Thiazole biosynthesis protein ThiG; This family consists of several bacterial thiazole biosynthesis protein G sequences. ThiG, together with ThiF and ThiH, is proposed to be involved in the synthesis of 4-methyl-5-(b-hydroxyethyl)thiazole (THZ) which is an intermediate in the thiazole production pathway. This family also includes triosephosphate isomerase and pyridoxal 5'-phosphate synthase subunit PdxS.


Pssm-ID: 428589  Cd Length: 247  Bit Score: 364.65  E-value: 7.43e-129
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079    8 IAGREFGSRLIMGTGGAANLAVLEEALIASGTELTTVAMRRVDAET---GTGVLDLLNRLGIATLPNTAGCRGAAEAVLT 84
Cdd:pfam05690   2 IGGKTFDSRLILGTGKYPSLEVLKEALRASGAQIVTVALRRVNLGAkpgGDNILDLLPPKGITLLPNTAGCRTAEEAVRT 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079   85 AQLAREALGTDWVKLEVIADERTLLPDAIELVRAAEQLVDDGFIVLPYTNDDPVLARRLEDTGCAAVMPLGSPIGTGLGI 164
Cdd:pfam05690  82 ARLAREALGTNWIKLEVIGDEKTLLPDPVETLKAAEILVKEGFIVLPYTSDDPVLARRLEEAGCAAVMPLGAPIGSGLGL 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  165 SNPHHIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTRAADPATMASAMASAVTAGYLARQAGRIPKRFW 244
Cdd:pfam05690 162 LNPYNLKIIIEEADVPVIVDAGIGTPSDAAQAMELGADAVLLNTAIARAKDPVAMARAFKLAVEAGRLAYLAGRMPRRDY 241

                  ....*.
gi 518343079  245 AQASSP 250
Cdd:pfam05690 242 ASASSP 247
ThiG cd04728
Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the ...
6-250 4.81e-128

Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).


Pssm-ID: 240079  Cd Length: 248  Bit Score: 362.58  E-value: 4.81e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079   6 LSIAGREFGSRLIMGTGGAANLAVLEEALIASGTELTTVAMRRVDAE--TGTGVLDLLNRLGIATLPNTAGCRGAAEAVL 83
Cdd:cd04728    1 LTIGGKTFSSRLLLGTGKYPSPAIMKEAIEASGAEIVTVALRRVNIGdpGGESFLDLLDKSGYTLLPNTAGCRTAEEAVR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  84 TAQLAREALGTDWVKLEVIADERTLLPDAIELVRAAEQLVDDGFIVLPYTNDDPVLARRLEDTGCAAVMPLGSPIGTGLG 163
Cdd:cd04728   81 TARLAREALGTDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDAGCAAVMPLGSPIGSGQG 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 164 ISNPHHIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTRAADPATMASAMASAVTAGYLARQAGRIPKRF 243
Cdd:cd04728  161 LLNPYNLRIIIERADVPVIVDAGIGTPSDAAQAMELGADAVLLNTAIAKAKDPVAMARAFKLAVEAGRLAYLAGRMPKRD 240

                 ....*..
gi 518343079 244 WAQASSP 250
Cdd:cd04728  241 YASASSP 247
PRK11840 PRK11840
bifunctional sulfur carrier protein/thiazole synthase protein; Provisional
1-250 4.05e-97

bifunctional sulfur carrier protein/thiazole synthase protein; Provisional


Pssm-ID: 236998 [Multi-domain]  Cd Length: 326  Bit Score: 287.03  E-value: 4.05e-97
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079   1 MADATLSIAGREFGSRLIMGTGGAANLAVLEEALIASGTELTTVAMRRVDAETGTG--VLDLLNRLGIATLPNTAGCRGA 78
Cdd:PRK11840  70 VADDSWTVAGKTFSSRLLVGTGKYKDFEETAAAVEASGAEIVTVAVRRVNVSDPGApmLTDYIDPKKYTYLPNTAGCYTA 149
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  79 AEAVLTAQLAREALGTDWVKLEVIADERTLLPDAIELVRAAEQLVDDGFIVLPYTNDDPVLARRLEDTGCAAVMPLGSPI 158
Cdd:PRK11840 150 EEAVRTLRLAREAGGWDLVKLEVLGDAKTLYPDMVETLKATEILVKEGFQVMVYCSDDPIAAKRLEDAGAVAVMPLGAPI 229
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 159 GTGLGISNPHHIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTRAADPATMASAMASAVTAGYLARQAGR 238
Cdd:PRK11840 230 GSGLGIQNPYTIRLIVEGATVPVLVDAGVGTASDAAVAMELGCDGVLMNTAIAEAKNPVLMARAMKLAVEAGRLAYLAGR 309
                        250
                 ....*....|..
gi 518343079 239 IPKRFWAQASSP 250
Cdd:PRK11840 310 MPRRRYADPSSP 321
thiG CHL00162
thiamin biosynthesis protein G; Validated
5-250 2.44e-92

thiamin biosynthesis protein G; Validated


Pssm-ID: 214380  Cd Length: 267  Bit Score: 272.74  E-value: 2.44e-92
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079   5 TLSIAGREFGSRLIMGTGGAANLAVLEEALIASGTELTTVAMRRVDAETGTG---VLDLLNRLGIATLPNTAGCRGAAEA 81
Cdd:CHL00162   7 KLKIGNKSFNSRLMLGTGKYKSLKDAIQSIEASGCEIVTVAIRRLNNNLLNDnsnLLNGLDWNKLWLLPNTAGCQTAEEA 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  82 VLTAQLARE---ALG---TDWVKLEVIADERTLLPDAIELVRAAEQLVDDGFIVLPYTNDDPVLARRLEDTGCAAVMPLG 155
Cdd:CHL00162  87 IRMAFLGRElakQLGqedNNFVKLEVISDPKYLLPDPIGTLKAAEFLVKKGFTVLPYINADPMLAKHLEDIGCATVMPLG 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 156 SPIGTGLGISNPHHIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTRAADPATMASAMASAVTAGYLARQ 235
Cdd:CHL00162 167 SPIGSGQGLQNLLNLQIIIENAKIPVIIDAGIGTPSEASQAMELGASGVLLNTAVAQAKNPEQMAKAMKLAVQAGRLAYL 246
                        250
                 ....*....|....*
gi 518343079 236 AGRIPKRFWAQASSP 250
Cdd:CHL00162 247 AGRMPKKKYAQASSP 261
PRK04302 PRK04302
triosephosphate isomerase; Provisional
158-216 8.05e-09

triosephosphate isomerase; Provisional


Pssm-ID: 235274  Cd Length: 223  Bit Score: 54.10  E-value: 8.05e-09
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 518343079 158 IGTGLGIS--NPHHIEMIVDAA-----NVPVILDAGIGTASDAALAMELGCDAVLLATAVTRAADP 216
Cdd:PRK04302 146 IGTGIPVSkaKPEVVEDAVEAVkkvnpDVKVLCGAGISTGEDVKAALELGADGVLLASGVVKAKDP 211
TIM_phosphate_binding cd04722
TIM barrel proteins share a structurally conserved phosphate binding motif and in general ...
73-208 3.65e-07

TIM barrel proteins share a structurally conserved phosphate binding motif and in general share an eight beta/alpha closed barrel structure. Specific for this family is the conserved phosphate binding site at the edges of strands 7 and 8. The phosphate comes either from the substrate, as in the case of inosine monophosphate dehydrogenase (IMPDH), or from ribulose-5-phosphate 3-epimerase (RPE) or from cofactors, like FMN.


Pssm-ID: 240073 [Multi-domain]  Cd Length: 200  Bit Score: 49.12  E-value: 3.65e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  73 AGCRGAAEAVLTAQLAREALGTDWVklEVIADERTLLPDAIELVRAAEQLVDDGFIVLPYTNDDPVLARRLEDTGCAAVM 152
Cdd:cd04722   64 LAINDAAAAVDIAAAAARAAGADGV--EIHGAVGYLAREDLELIRELREAVPDVKVVVKLSPTGELAAAAAEEAGVDEVG 141
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 518343079 153 PLGSPIGTGLGISNPHHIEMIVDA---ANVPVILDAGIGTASDAALAMELGCDAVLLAT 208
Cdd:cd04722  142 LGNGGGGGGGRDAVPIADLLLILAkrgSKVPVIAGGGINDPEDAAEALALGADGVIVGS 200
NanE cd04729
N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to ...
169-212 8.45e-05

N-acetylmannosamine-6-phosphate epimerase (NanE) converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate. This reaction is part of the pathway that allows the usage of sialic acid as a carbohydrate source. Sialic acids are a family of related sugars that are found as a component of glycoproteins, gangliosides, and other sialoglycoconjugates.


Pssm-ID: 240080 [Multi-domain]  Cd Length: 219  Bit Score: 42.56  E-value: 8.45e-05
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....
gi 518343079 169 HIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTR 212
Cdd:cd04729  168 LLKELRKALGIPVIAEGRINSPEQAAKALELGADAVVVGSAITR 211
PRK01130 PRK01130
putative N-acetylmannosamine-6-phosphate 2-epimerase;
170-212 2.42e-04

putative N-acetylmannosamine-6-phosphate 2-epimerase;


Pssm-ID: 234907  Cd Length: 221  Bit Score: 41.29  E-value: 2.42e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 518343079 170 IEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTR 212
Cdd:PRK01130 165 LKELLKAVGCPVIAEGRINTPEQAKKALELGAHAVVVGGAITR 207
FCB2_FMN cd02922
Flavocytochrome b2 (FCB2) FMN-binding domain. FCB2 (AKA L-lactate:cytochrome c oxidoreductase) ...
112-206 4.79e-04

Flavocytochrome b2 (FCB2) FMN-binding domain. FCB2 (AKA L-lactate:cytochrome c oxidoreductase) is a respiratory enzyme located in the intermembrane space of fungal mitochondria which catalyzes the oxidation of L-lactate to pyruvate. FCB2 also participates in a short electron-transport chain involving cytochrome c and cytochrome oxidase which ultimately directs the reducing equivalents gained from L-lactate oxidation to oxygen, yielding one molecule of ATP for every L-lactate molecule consumed. FCB2 is composed of 2 domains: a C-terminal flavin-binding domain, which includes the active site for lacate oxidation, and an N-terminal b2-cytochrome domain, required for efficient cytochrome c reduction. FCB2 is a homotetramer and contains two noncovalently bound cofactors, FMN and heme per subunit.


Pssm-ID: 239238 [Multi-domain]  Cd Length: 344  Bit Score: 40.66  E-value: 4.79e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 112 AIELVRAAEQLVDDGFIVlpyTNDDPVLARRLED----------TGCAAVMPLGSPIGTGLGISNPHH-------IEMIV 174
Cdd:cd02922  133 TEELLKRAEKLGAKAIFL---TVDAPVLGKRERDerlkaeeavsDGPAGKKTKAKGGGAGRAMSGFIDptltwddIKWLR 209
                         90       100       110
                 ....*....|....*....|....*....|..
gi 518343079 175 DAANVPVILDaGIGTASDAALAMELGCDAVLL 206
Cdd:cd02922  210 KHTKLPIVLK-GVQTVEDAVLAAEYGVDGIVL 240
NPD_like cd04730
2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes ...
170-209 1.57e-03

2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDP is a member of the NAD(P)H-dependent flavin oxidoreductase family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN.


Pssm-ID: 240081 [Multi-domain]  Cd Length: 236  Bit Score: 38.62  E-value: 1.57e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 518343079 170 IEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATA 209
Cdd:cd04730  148 VPEVRDAVDIPVIAAGGIADGRGIAAALALGADGVQMGTR 187
DHDPS-like cd00408
Dihydrodipicolinate synthase family; Dihydrodipicolinate synthase family. A member of the ...
127-208 1.59e-03

Dihydrodipicolinate synthase family; Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stabilizes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.


Pssm-ID: 188630 [Multi-domain]  Cd Length: 281  Bit Score: 39.07  E-value: 1.59e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 127 FIVLPYTNDDPV-------LARRLEDTGCAAVMPLGSpigTGLG--ISNPHH---IEMIVDAAN--VPVIldAGIGTASD 192
Cdd:cd00408    4 ALVTPFTADGEVdldalrrLVEFLIEAGVDGLVVLGT---TGEAptLTDEERkevIEAVVEAVAgrVPVI--AGVGANST 78
                         90       100
                 ....*....|....*....|..
gi 518343079 193 ------AALAMELGCDAVLLAT 208
Cdd:cd00408   79 reaielARHAEEAGADGVLVVP 100
HisA_HisF cd04723
Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase (HisA) ...
18-210 2.49e-03

Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase (HisA) and the cyclase subunit of imidazoleglycerol phosphate synthase (HisF). The ProFAR isomerase catalyzes the fourth step in histidine biosynthesis, an isomerisation of the aminoaldose moiety of ProFAR to the aminoketose of PRFAR (N-(5'-phospho-D-1'-ribulosylformimino)-5-amino-1-(5''-phospho-ribosyl)-4-imidazolecarboxamide). In bacteria and archaea, ProFAR isomerase is encoded by the HisA gene. The Imidazole glycerol phosphate synthase (IGPS) catalyzes the fifth step of histidine biosynthesis, the formation of the imidazole ring. IGPS converts N1-(5'-phosphoribulosyl)-formimino-5-aminoimidazole-4-carboxamide ribonucleotide (PRFAR) to imidazole glycerol phosphate (ImGP) and 5'-(5-aminoimidazole-4-carboxamide) ribonucleotide (AICAR). This conversion involves two tightly coupled reactions in distinct active sites of IGPS. The two catalytic domains can be fused, like in fungi and plants, or peformed by a heterodimer (HisH-glutaminase and HisF-cyclase), like in bacteria.


Pssm-ID: 240074 [Multi-domain]  Cd Length: 233  Bit Score: 38.02  E-value: 2.49e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  18 IMGTGGaaNLAVLEEALIASGTELTtvamrrVDAetgtgvldllnrlGIATLPNTAGC--RGAAEAVLTAQLAREALGTD 95
Cdd:cd04723   60 IMGRGD--NDEAIRELAAAWPLGLW------VDG-------------GIRSLENAQEWlkRGASRVIVGTETLPSDDDED 118
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079  96 wvKLEVIADER---------------TLLPDAIELVRAAEQLVDdGFIVLPytnddpvLARrledtgcaavmplgspIGT 160
Cdd:cd04723  119 --RLAALGEQRlvlsldfrggqllkpTDFIGPEELLRRLAKWPE-ELIVLD-------IDR----------------VGS 172
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 518343079 161 GLGIsNPHHIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAV 210
Cdd:cd04723  173 GQGP-DLELLERLAARADIPVIAAGGVRSVEDLELLKKLGASGALVASAL 221
DUS_like_FMN cd02801
Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze ...
139-214 2.69e-03

Dihydrouridine synthase-like (DUS-like) FMN-binding domain. Members of this family catalyze the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also in some archaea. Most dihydrouridines are found in the D loop of t-RNAs. The role of dihydrouridine in tRNA is currently unknown, but may increase conformational flexibility of the tRNA. It is likely that different family members have different substrate specificities, which may overlap. 1VHN, a putative flavin oxidoreductase, has high sequence similarity to DUS. The enzymatic mechanism of 1VHN is not known at the present.


Pssm-ID: 239200 [Multi-domain]  Cd Length: 231  Bit Score: 37.86  E-value: 2.69e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 139 LARRLEDTGCAAV---------MPLGSPigtglgisNPHHIEMIVDAANVPVILDAGIGTASDAALAMEL-GCDAVLLAt 208
Cdd:cd02801  143 LAKALEDAGASALtvhgrtreqRYSGPA--------DWDYIAEIKEAVSIPVIANGDIFSLEDALRCLEQtGVDGVMIG- 213

                 ....*.
gi 518343079 209 avtRAA 214
Cdd:cd02801  214 ---RGA 216
YrpB COG2070
NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family [General ...
170-209 2.73e-03

NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family [General function prediction only];


Pssm-ID: 441673 [Multi-domain]  Cd Length: 302  Bit Score: 38.17  E-value: 2.73e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 518343079 170 IEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATA 209
Cdd:COG2070  150 VPEVRDAVDIPVIAAGGIADGRGIAAALALGADGVQMGTR 189
His_biosynth pfam00977
Histidine biosynthesis protein; Proteins involved in steps 4 and 6 of the histidine ...
139-209 3.08e-03

Histidine biosynthesis protein; Proteins involved in steps 4 and 6 of the histidine biosynthesis pathway are contained in this family. Histidine is formed by several complex and distinct biochemical reactions catalyzed by eight enzymes. The enzymes in this Pfam entry are called His6 and His7 in eukaryotes and HisA and HisF in prokaryotes. The structure of HisA is known to be a TIM barrel fold. In some archaeal HisA proteins the TIM barrel is composed of two tandem repeats of a half barrel. This family belong to the common phosphate binding site TIM barrel family.


Pssm-ID: 425971  Cd Length: 228  Bit Score: 37.84  E-value: 3.08e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 518343079  139 LARRLEDTGCAAVmplgspI-------GTGLGIsNPHHIEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATA 209
Cdd:pfam00977 151 WAKELEELGAGEI------LltdidrdGTLSGP-DLELTRELAEAVNIPVIASGGVGSLEDLKELFTEGVDGVIAGSA 221
LldD COG1304
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl ...
140-214 3.98e-03

FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase [Energy production and conversion, Lipid transport and metabolism, General function prediction only]; FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase is part of the Pathway/BioSystem: Isoprenoid biosynthesis


Pssm-ID: 440915 [Multi-domain]  Cd Length: 357  Bit Score: 37.80  E-value: 3.98e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 140 ARRLEDTGCAAVmplgspI-----GTGL--GISNPHHIEMIVDAAN--VPVILDAGIGTASDAALAMELGCDAVLLATAV 210
Cdd:COG1304  239 ARRAVDAGVDGI------DvsnhgGRQLdgGPPTIDALPEIRAAVGgrIPVIADGGIRRGLDVAKALALGADAVGLGRPF 312

                 ....
gi 518343079 211 TRAA 214
Cdd:COG1304  313 LYGL 316
OYE_like_FMN_family cd02803
Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme ...
112-216 5.03e-03

Old yellow enzyme (OYE)-like FMN binding domain. OYE was the first flavin-dependent enzyme identified, however its true physiological role remains elusive to this day. Each monomer of OYE contains FMN as a non-covalently bound cofactor, uses NADPH as a reducing agent with oxygens, quinones, and alpha,beta-unsaturated aldehydes and ketones, and can act as electron acceptors in the catalytic reaction. Members of OYE family include trimethylamine dehydrogenase, 2,4-dienoyl-CoA reductase, enoate reductase, pentaerythriol tetranitrate reductase, xenobiotic reductase, and morphinone reductase.


Pssm-ID: 239201 [Multi-domain]  Cd Length: 327  Bit Score: 37.55  E-value: 5.03e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518343079 112 AIELVRAAEQLVDDGFIVL-----------PYTNDDPV-LARRLEDTGCAAV-MPLGSPIGTGLGISNPHHIEM------ 172
Cdd:cd02803  194 LLEIVAAVREAVGPDFPVGvrlsaddfvpgGLTLEEAIeIAKALEEAGVDALhVSGGSYESPPPIIPPPYVPEGyflela 273
                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*....
gi 518343079 173 --IVDAANVPVILDAGIGTASDAALAM-ELGCDAVLLAtavtRA--ADP 216
Cdd:cd02803  274 ekIKKAVKIPVIAVGGIRDPEVAEEILaEGKADLVALG----RAllADP 318
LMO_FMN cd03332
L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that ...
173-206 5.41e-03

L-Lactate 2-monooxygenase (LMO) FMN-binding domain. LMO is a FMN-containing enzyme that catalyzes the conversion of L-lactate and oxygen to acetate, carbon dioxide, and water. LMO is a member of the family of alpha-hydroxy acid oxidases. It is thought to be a homooctamer with two- and four- fold axes in the center of the octamer.


Pssm-ID: 239448 [Multi-domain]  Cd Length: 383  Bit Score: 37.65  E-value: 5.41e-03
                         10        20        30
                 ....*....|....*....|....*....|....*.
gi 518343079 173 IVDAA--NVPVILDAGIGTASDAALAMELGCDAVLL 206
Cdd:cd03332  301 IVEAVgdRLTVLFDSGVRTGADIMKALALGAKAVLI 336
PRK13585 PRK13585
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide ...
170-212 8.88e-03

1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase;


Pssm-ID: 184165  Cd Length: 241  Bit Score: 36.42  E-value: 8.88e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|...
gi 518343079 170 IEMIVDAANVPVILDAGIGTASDAALAMELGCDAVLLATAVTR 212
Cdd:PRK13585  68 IEKIIEAVGVPVQLGGGIRSAEDAASLLDLGVDRVILGTAAVE 110
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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