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Conserved domains on  [gi|518491445|ref|WP_019661652|]
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MULTISPECIES: DUF4129 domain-containing protein [Stenotrophomonas]

Protein Classification

DUF4129 domain-containing protein( domain architecture ID 10611667)

DUF4129 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4129 pfam13559
Domain of unknown function (DUF4129); This presumed domain is found at the C-terminus of ...
 462-533 4.72e-04

Domain of unknown function (DUF4129); This presumed domain is found at the C-terminus of proteins that contain a transglutaminase core domain. The function of this domain is unknown. The domain has a conserved TXXE motif.


:

Pssm-ID: 433308  Cd Length: 70  Bit Score: 38.68  E-value: 4.72e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 518491445  462 LYRASVRTVgERSGIALPPGATEAQCLRASRRMPEAsDRDLFARIVRMWQYAAYGGRLPSRADFDALADTLR 533
Cdd:pfam13559   1 AYRALLRLL-ARRGLPRRPSETPREYARRLARALPA-LAAALRRLTRLYERARYGGRPVTAEDLRRARAALR 70
 
Name Accession Description Interval E-value
DUF4129 pfam13559
Domain of unknown function (DUF4129); This presumed domain is found at the C-terminus of ...
 462-533 4.72e-04

Domain of unknown function (DUF4129); This presumed domain is found at the C-terminus of proteins that contain a transglutaminase core domain. The function of this domain is unknown. The domain has a conserved TXXE motif.


Pssm-ID: 433308  Cd Length: 70  Bit Score: 38.68  E-value: 4.72e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 518491445  462 LYRASVRTVgERSGIALPPGATEAQCLRASRRMPEAsDRDLFARIVRMWQYAAYGGRLPSRADFDALADTLR 533
Cdd:pfam13559   1 AYRALLRLL-ARRGLPRRPSETPREYARRLARALPA-LAAALRRLTRLYERARYGGRPVTAEDLRRARAALR 70
 
Name Accession Description Interval E-value
DUF4129 pfam13559
Domain of unknown function (DUF4129); This presumed domain is found at the C-terminus of ...
 462-533 4.72e-04

Domain of unknown function (DUF4129); This presumed domain is found at the C-terminus of proteins that contain a transglutaminase core domain. The function of this domain is unknown. The domain has a conserved TXXE motif.


Pssm-ID: 433308  Cd Length: 70  Bit Score: 38.68  E-value: 4.72e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 518491445  462 LYRASVRTVgERSGIALPPGATEAQCLRASRRMPEAsDRDLFARIVRMWQYAAYGGRLPSRADFDALADTLR 533
Cdd:pfam13559   1 AYRALLRLL-ARRGLPRRPSETPREYARRLARALPA-LAAALRRLTRLYERARYGGRPVTAEDLRRARAALR 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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