|
Name |
Accession |
Description |
Interval |
E-value |
| MotA |
COG1291 |
Flagellar motor component MotA [Cell motility]; |
3-245 |
1.65e-99 |
|
Flagellar motor component MotA [Cell motility];
Pssm-ID: 440902 [Multi-domain] Cd Length: 258 Bit Score: 290.82 E-value: 1.65e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 3 ITSIIGLLAGIAALIGGFFWEGGSLTGLLQLNAALIVFGGTFAAVLISFPASKLRRVPAALRVAFGKQSDRPEEKAEELI 82
Cdd:COG1291 1 MATIIGLVVGLGAVLGGFLLEGGSLGALIQPPSLLIVFGGTLGAVLISFPLKVLKAALKALKKAFKGKKADYEELIELLV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 83 SMAAIMRRGGLLALEKRAEEHPDPYTREGLMLIVDGTDPVQVRQILELEMDAKELKYEGYAKIFEAAGGYAPTMGIIGTV 162
Cdd:COG1291 81 ELAEKARKEGLLALESDIEEIDDPFLRDGLRLVVDGTDPEEIRELLETEIEAMEERHEAGAKVFEAMGDYAPAFGIIGTV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 163 MGLIRVLSSLTDPSNLGASIAVAFTATLYGVASANLIFLPIASKIKSRCQSELATMEMLLVGILGLQNGDHPQLVRRKLS 242
Cdd:COG1291 161 LGLIQMLGNLDDPSALGPGIAVALVTTFYGVLLANLFFLPIANKLKRRSEEEVLLREMIIEGLLAIQAGENPRIIEEKLR 240
|
...
gi 518757518 243 PFI 245
Cdd:COG1291 241 SFL 243
|
|
| motC |
PRK09109 |
flagellar motor protein; Reviewed |
1-246 |
7.00e-90 |
|
flagellar motor protein; Reviewed
Pssm-ID: 181654 [Multi-domain] Cd Length: 246 Bit Score: 266.04 E-value: 7.00e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 1 MDITSIIGLLAGIAALIGGFFWEGGSLTGLLQLNAALIVFGGTFAAVLISFPASKLRRVPAALRVAFGKQSDRPEEKAEE 80
Cdd:PRK09109 1 MDVLSLIGLILAFVAIIGGQVLEGGHLGSLLNGPAFLIVIGGTLGAVLLQTPLAVFKRAFKILRWVFFPPRSDLEGGIDR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 81 LISMAAIMRRGGLLALEKRAEEHPDPYTREGLMLIVDGTDPVQVRQILELEMDAKELKYEGYAKIFEAAGGYAPTMGIIG 160
Cdd:PRK09109 81 IVEWSNTARKEGLLGLEDVADREPDPFARKGLQLLVDGAEPESIRSVLEVEIDTQEHRDLQAAKVFESMGGYAPTIGIIG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 161 TVMGLIRVLSSLTDPSNLGASIAVAFTATLYGVASANLIFLPIASKIKSRCQSELATMEMLLVGILGLQNGDHPQLVRRK 240
Cdd:PRK09109 161 AVMGLIHVMENLADPSQLGSGIAVAFVATIYGVASANLLFLPVANKLKSIIHRQSRYREMLVEGLVAIAEGENPRSIELK 240
|
....*.
gi 518757518 241 LSPFIE 246
Cdd:PRK09109 241 LQGYLH 246
|
|
| MotA_ExbB |
pfam01618 |
MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins ... |
100-215 |
1.82e-29 |
|
MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.
Pssm-ID: 460268 Cd Length: 120 Bit Score: 107.56 E-value: 1.82e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 100 AEEHPDPYTREGLMLIVDGTDPVQVRQILELEMDAKELKYEGYAKIFEAAGGYAPTMGIIGTVMGLIRVLSSLTD----P 175
Cdd:pfam01618 2 ANSPEDRFLKKGLQLVVDGTDPEEIRRALEEAIDREEERLERGLSILATIGSLAPLLGLLGTVLGLIHAFQNLGDagpgL 81
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 518757518 176 SNLGASIAVAFTATLYGVASAnLIFLPIASKIKSRCQSEL 215
Cdd:pfam01618 82 SALAPGIAEALIATAYGLFVA-IPALPFYNKLKRRSEREV 120
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| MotA |
COG1291 |
Flagellar motor component MotA [Cell motility]; |
3-245 |
1.65e-99 |
|
Flagellar motor component MotA [Cell motility];
Pssm-ID: 440902 [Multi-domain] Cd Length: 258 Bit Score: 290.82 E-value: 1.65e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 3 ITSIIGLLAGIAALIGGFFWEGGSLTGLLQLNAALIVFGGTFAAVLISFPASKLRRVPAALRVAFGKQSDRPEEKAEELI 82
Cdd:COG1291 1 MATIIGLVVGLGAVLGGFLLEGGSLGALIQPPSLLIVFGGTLGAVLISFPLKVLKAALKALKKAFKGKKADYEELIELLV 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 83 SMAAIMRRGGLLALEKRAEEHPDPYTREGLMLIVDGTDPVQVRQILELEMDAKELKYEGYAKIFEAAGGYAPTMGIIGTV 162
Cdd:COG1291 81 ELAEKARKEGLLALESDIEEIDDPFLRDGLRLVVDGTDPEEIRELLETEIEAMEERHEAGAKVFEAMGDYAPAFGIIGTV 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 163 MGLIRVLSSLTDPSNLGASIAVAFTATLYGVASANLIFLPIASKIKSRCQSELATMEMLLVGILGLQNGDHPQLVRRKLS 242
Cdd:COG1291 161 LGLIQMLGNLDDPSALGPGIAVALVTTFYGVLLANLFFLPIANKLKRRSEEEVLLREMIIEGLLAIQAGENPRIIEEKLR 240
|
...
gi 518757518 243 PFI 245
Cdd:COG1291 241 SFL 243
|
|
| motC |
PRK09109 |
flagellar motor protein; Reviewed |
1-246 |
7.00e-90 |
|
flagellar motor protein; Reviewed
Pssm-ID: 181654 [Multi-domain] Cd Length: 246 Bit Score: 266.04 E-value: 7.00e-90
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 1 MDITSIIGLLAGIAALIGGFFWEGGSLTGLLQLNAALIVFGGTFAAVLISFPASKLRRVPAALRVAFGKQSDRPEEKAEE 80
Cdd:PRK09109 1 MDVLSLIGLILAFVAIIGGQVLEGGHLGSLLNGPAFLIVIGGTLGAVLLQTPLAVFKRAFKILRWVFFPPRSDLEGGIDR 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 81 LISMAAIMRRGGLLALEKRAEEHPDPYTREGLMLIVDGTDPVQVRQILELEMDAKELKYEGYAKIFEAAGGYAPTMGIIG 160
Cdd:PRK09109 81 IVEWSNTARKEGLLGLEDVADREPDPFARKGLQLLVDGAEPESIRSVLEVEIDTQEHRDLQAAKVFESMGGYAPTIGIIG 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 161 TVMGLIRVLSSLTDPSNLGASIAVAFTATLYGVASANLIFLPIASKIKSRCQSELATMEMLLVGILGLQNGDHPQLVRRK 240
Cdd:PRK09109 161 AVMGLIHVMENLADPSQLGSGIAVAFVATIYGVASANLLFLPVANKLKSIIHRQSRYREMLVEGLVAIAEGENPRSIELK 240
|
....*.
gi 518757518 241 LSPFIE 246
Cdd:PRK09109 241 LQGYLH 246
|
|
| PRK08124 |
PRK08124 |
flagellar motor protein MotA; Validated |
1-246 |
3.89e-74 |
|
flagellar motor protein MotA; Validated
Pssm-ID: 181238 [Multi-domain] Cd Length: 263 Bit Score: 226.76 E-value: 3.89e-74
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 1 MDITSIIGLLAGIAALIGGFFWEGGSLTGLLQLNAALIVFGGTFAAVLISFPASKLRRVPAALRVAFGKQSD-RPEEKAE 79
Cdd:PRK08124 1 MDITTIIGLILGLIAVVVGMVVKGASLAVLLNPAAILIIIVGTIAAVMIAFPMSELKKVPKLFKVLFKEKKDpSKEELIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 80 ELISMAAIMRRGGLLALEKRAEEHPDPYTREGLMLIVDGTDPVQVRQILELEMDAKELKYEGYAKIFEAAGGYAPTMGII 159
Cdd:PRK08124 81 QFVEWASESRREGLLALEAQLDEIDDPFLKRGLKMVIDGQSPEFIRDVLEEEIEAMEERHAAGAAIFTQAGTYAPTLGVL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 160 GTVMGLIRVLSSLTDPSNLGASIAVAFTATLYGVASANLIFLPIASKIKSRCQSELATMEMLLVGILGLQNGDHPQLVRR 239
Cdd:PRK08124 161 GAVIGLIAALGNLSDIEKLGHAISAAFVATLLGIFTGYVLWHPFANKLKRKSKEEIELKYIIIEGVLAIQEGNAPRVIEE 240
|
....*..
gi 518757518 240 KLSPFIE 246
Cdd:PRK08124 241 KLLGYLS 247
|
|
| PRK06926 |
PRK06926 |
flagellar motor protein MotP; Reviewed |
2-259 |
2.73e-60 |
|
flagellar motor protein MotP; Reviewed
Pssm-ID: 180755 [Multi-domain] Cd Length: 271 Bit Score: 191.47 E-value: 2.73e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 2 DITSIIGLLAGIAALIGGFFWEGG--SLTGLLQLNAALIVFGGTFAAVLISFPASKLRRVPAALRVAFGKQSDRPEEKAE 79
Cdd:PRK06926 5 DYLTPVGIFLGITIVVLGVISNSGlsGFLSFIDLTSILIVTGGLCAALFISFSPKDLKLAPRVLKQAFQSQEDDVEELVQ 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 80 ELISMAAIMRRGGLLALEKRAEEHPDPYTREGLMLIVDGTDPVQVRQILELEMDAKELKYEGYAKIFEAAGGYAPTMGII 159
Cdd:PRK06926 85 TFVSLSEKARREGLLSLEAELEEVKDPFIKKGLLLAIDGWEPETIRDIMMAEIAAMEERHRKGRRIFEKAGEYAPAWGMI 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 160 GTVMGLIRVLSSLTDPSNLGASIAVAFTATLYGVASANLIFLPIASKIKSRCQSELATMEMLLVGILGLQNGDHPQLVRR 239
Cdd:PRK06926 165 GTLVGLVLMLKNLNDPSTLGPNMAIALLTTLYGTLLANLVFLPIAAKLEEKTEEEVFVKQVIIEGVIGVQSGQNPRILEE 244
|
250 260
....*....|....*....|..
gi 518757518 240 KLSPFI--EDYAGERSTESARG 259
Cdd:PRK06926 245 KLSVFSskEDWTKEEEDRKKKE 266
|
|
| PRK08456 |
PRK08456 |
flagellar motor protein MotA; Validated |
1-245 |
7.87e-56 |
|
flagellar motor protein MotA; Validated
Pssm-ID: 181434 [Multi-domain] Cd Length: 257 Bit Score: 179.92 E-value: 7.87e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 1 MDITSIIGLLAGIAALIGGFFWEGGSLTGLLQLNAALIVFGGT-FAAVLisfpASKLRRVPAA---LRVAFGKQSDRPEE 76
Cdd:PRK08456 1 MDLSTILGMVLAVASISVGDILEGGNPLHVIHLSSFIIVVPTAlFAAMT----ATHKKYVKAAykeLKIVFKNPGVNLNE 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 77 KAEELISMAAIMRRGGLLALEKRAEEHPDPYTREGLMLIVDGTDPVQVRQILELEMDAKELKYEGYAKIFEAAGGYAPTM 156
Cdd:PRK08456 77 RIKQLVELATLARKDGVLALEGRVAQIEDEFLKNGLSMLVDGKDLEEIKESMEIQIEEMEEYYHGAAHYWITAGETCPTM 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 157 GIIGTVMGLIRVLSSLTDPSNLGASIAVAFTATLYGVASANLIFLPIASKIKSRCQSELATMEMLLVGILGLQNGDHPQL 236
Cdd:PRK08456 157 GLVGAVMGLMLALQKLDNPAEMAAGIAGAFTATVTGIMGSYALFGPWGHKLKAKSKDIIKEKTVILEGILGIAEGANPRD 236
|
....*....
gi 518757518 237 VRRKLSPFI 245
Cdd:PRK08456 237 LEEKLLNYL 245
|
|
| PRK08990 |
PRK08990 |
flagellar motor protein PomA; Reviewed |
1-237 |
5.49e-47 |
|
flagellar motor protein PomA; Reviewed
Pssm-ID: 181604 [Multi-domain] Cd Length: 254 Bit Score: 156.74 E-value: 5.49e-47
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 1 MDITSIIGLLAGIAALIGGFFWeGGSLTGLLQLNAALIVFGGTFAAVLISFpasKLRRVPAALRV---AFGKQSDRPEEK 77
Cdd:PRK08990 1 MDLATLIGLIGAFAFVIMAMVL-GGGIGMFVDVPSILIVFGGSLFVVLMKF---NLGQFFGAVKIagkAFMFKIDKPEDL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 78 AEELISMAAIMRRGGLLALEKRaeEHPDPYTREGLMLIVDGTDPVQVRQILELEMDAKELKYEGYAKIFEAAGGYAPTMG 157
Cdd:PRK08990 77 IEQIVEMADAARKGGFLALEEA--EISNSFMQKGVDLLVDGHDGDVVRAALEKDIALTEERHETGIGIFRAFGDVAPAMG 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 158 IIGTVMGLIRVLSSLTDPSNLGASIAVAFTATLYGVASANLIFLPIASKIKSRCQSELATMEMLLVGILGLQNGDHPQLV 237
Cdd:PRK08990 155 MIGTLIGLVAMLSNMDDPKSIGPAMAVALLTTLYGAVLANMVAIPIADKLSLRMGEEMLNRNLIMDAVLAIQDGQNPRVI 234
|
|
| MotA_ExbB |
pfam01618 |
MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins ... |
100-215 |
1.82e-29 |
|
MotA/TolQ/ExbB proton channel family; This family groups together integral membrane proteins that appear to be involved translocation of proteins across a membrane. These proteins are probably proton channels. MotA is an essential component of the flageller motor that uses a proton gradient to generate rotational motion in the flageller. ExbB is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane.
Pssm-ID: 460268 Cd Length: 120 Bit Score: 107.56 E-value: 1.82e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 100 AEEHPDPYTREGLMLIVDGTDPVQVRQILELEMDAKELKYEGYAKIFEAAGGYAPTMGIIGTVMGLIRVLSSLTD----P 175
Cdd:pfam01618 2 ANSPEDRFLKKGLQLVVDGTDPEEIRRALEEAIDREEERLERGLSILATIGSLAPLLGLLGTVLGLIHAFQNLGDagpgL 81
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 518757518 176 SNLGASIAVAFTATLYGVASAnLIFLPIASKIKSRCQSEL 215
Cdd:pfam01618 82 SALAPGIAEALIATAYGLFVA-IPALPFYNKLKRRSEREV 120
|
|
| PRK06743 |
PRK06743 |
flagellar motor protein MotP; Reviewed |
7-245 |
9.37e-29 |
|
flagellar motor protein MotP; Reviewed
Pssm-ID: 136027 Cd Length: 254 Bit Score: 109.68 E-value: 9.37e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 7 IGLLAGIAALIGGFFWEGGSLTGL---LQLNAALIVFGGTFAAVLISFPASKLRRVPAALRVAFGKQSDRPEEKAEELIS 83
Cdd:PRK06743 1 VGIIVGFAIVIAAIMLGGGGIKAFknfLDVSSILIVIGGTTATIVVAYRFGEIKKYTKSIFTVLHRREEDLEQLTDLFVD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 84 MAAIMRRGGLLALEKRAEEHPDPYTREGLMLIVDGTDPVQVRQILELEMDAKELKYEGYAKIFEAAGGYAPTMGIIGTVM 163
Cdd:PRK06743 81 FSKKSKKHGLLSLEVDGEQVDNPFIQKGIRLMLSGYDEDELKEVLMKDVETEVYELRKGAALLDKIGDFAPAWGMIGTLI 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 164 GLIRVLSSLTDPSNLGASIAVAFTATLYGVASANLIFLPIASKIKSRCQSELATMEMLLVGILGLQNGDHPQLVRRKLSP 243
Cdd:PRK06743 161 GLIIMLQNLQDTSQIGTGMAVAMLTTLYGSVLANMIAIPLAEKVYRGIEDLYTEKKFVIEAISELYRGQIPSKLKLKLDT 240
|
..
gi 518757518 244 FI 245
Cdd:PRK06743 241 YV 242
|
|
| PRK09110 |
PRK09110 |
flagellar motor stator protein MotA; |
6-236 |
7.42e-14 |
|
flagellar motor stator protein MotA;
Pssm-ID: 181655 [Multi-domain] Cd Length: 283 Bit Score: 69.42 E-value: 7.42e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 6 IIGLLAGIAALIGGFFWEGGSLTGLLQLNAALIVFGGTFAAVLISFPASKLRRVPAALRVAFGkqsdRPEEKAE---ELI 82
Cdd:PRK09110 4 IIGYIVVLGSVFGGYLLAGGHLGALIQPAELLIIGGAALGAFIVGNPGKAIKATLKALPKLFK----GPKYKKAdymDLL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 83 SM----AAIMRRGGLLALEKRAEehpDP--------YTR------------EGLMLIVDGT-DPVQVRQILELEMDAKEL 137
Cdd:PRK09110 80 ALlyelLRKARQEGMMALEAHIE---NPeespifakYPKilkdhhlvdficDYLRLMISGNmNPHEIEALMDEEIETHHH 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 138 KYEGYAKIFEAAGGYAPTMGIIGTVMGLIRVLSSLT-DPSNLGASIAVAFTATLYGVASANLIFLPIASKIKSRCQSELA 216
Cdd:PRK09110 157 EAEVPAHALQKVADALPAFGIVAAVLGVVKTMGSIDqPPAVLGALIGAALVGTFLGILLAYGFVGPLAARLEQVVEEDTK 236
|
250 260
....*....|....*....|
gi 518757518 217 TMEMLLVGILGLQNGDHPQL 236
Cdd:PRK09110 237 MYQCIKVTLLASLNGYAPQI 256
|
|
| PRK12482 |
PRK12482 |
flagellar motor stator protein MotA; |
6-219 |
1.19e-10 |
|
flagellar motor stator protein MotA;
Pssm-ID: 171532 [Multi-domain] Cd Length: 287 Bit Score: 60.53 E-value: 1.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 6 IIGLLAGIAALIGGFFWEGGSLTGLLQLNAALIVFGGTFAAVLISFPASKLRRVPAALRVAFGKQSDRPEEKAEELISM- 84
Cdd:PRK12482 4 LFGLLVVMGCVFGGYLMSGGSLSSIWQPGEIIIILGAGIGAMILGNPKSVLKEMWHQIKGVIRRKEYGVEFQRQLLLLLy 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 85 --AAIMRRGGLLALEKRAE--EHPDPYTREGLML--------IVDG--------TDPVQVRQILELEMDAKELKYEGYAK 144
Cdd:PRK12482 84 elLEMVQEGGLKRLDQHIEipEESSLFQKYPLILqqkrlitfISDNfrlmamgkINQHELEGILDQELDAVEEELLQPSR 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 518757518 145 IFEAAGGYAPTMGIIGTVMGLIRVLSSLTDP-SNLGASIAVAFTATLYGVASANLIFLPIASKIKSRCQSELATME 219
Cdd:PRK12482 164 SLQRIAEAMPGFGICAAVLGIIITMQSIDGSiAEIGLKVAAALVGTFLGVFICYCLMDPLANAMEQEIKKELSLLE 239
|
|
| TolQ |
COG0811 |
Biopolymer transport protein ExbB/TolQ [Intracellular trafficking, secretion, and vesicular ... |
86-196 |
3.48e-06 |
|
Biopolymer transport protein ExbB/TolQ [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 440573 Cd Length: 199 Bit Score: 46.37 E-value: 3.48e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518757518 86 AIMRRGGLLALEKRAEEHPDPYTR---EGLMLIVDGTDPVQVRQILELEMDAKELKYEGYAKIFEAAGGYAPTMGIIGTV 162
Cdd:COG0811 50 ELWSAGDLDEAIELCEARNSPLARilaAGLRELKSGGGREAIERALEEAASRELPRLERGLSFLATIGSIAPLLGLLGTV 129
|
90 100 110
....*....|....*....|....*....|....*....
gi 518757518 163 MGLIRVLSSL-----TDPSNLGASIAVAFTATLYGVASA 196
Cdd:COG0811 130 WGMINAFQAIaaagqADLAVVAGGISEALITTAAGLAVA 168
|
|
| MotA_N |
pfam20560 |
Motility protein A N-terminal; This entry represents the N-terminal domain of Motility protein ... |
6-67 |
8.46e-05 |
|
Motility protein A N-terminal; This entry represents the N-terminal domain of Motility protein A (MotA). MotA is a membrane protein that forms the stator element of the flagellar motor complex together with MotB with 5:2 stoichiometry, which couples ion flow across the cytoplasmic membrane to generate torque, and thus, it is required for rotation of the flagellar motor. This domain contains conserved torque-generating charged residues at the C-terminal and is adjacent pfam01618, which represents MotA TMH3 and TMH4.
Pssm-ID: 466709 [Multi-domain] Cd Length: 91 Bit Score: 40.46 E-value: 8.46e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 518757518 6 IIGLLAGIAALIGGFFWEGGSLTGLLQLNAA-LIVFGGTFAAVLISFPASKLRRVPAALRVAF 67
Cdd:pfam20560 1 IIGIVVVLGCVFGGYALAGGHLGVLWQLPFElLIIGGAAIGAFIIANPMKVLKATLKALPKAF 63
|
|
| |
