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Conserved domains on  [gi|518851349|ref|WP_020007239|]
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F0F1 ATP synthase subunit epsilon [Salinicoccus albus]

Protein Classification

FoF1 ATP synthase subunit epsilon( domain architecture ID 11479057)

FoF1 ATP synthase subunit epsilon is part of the catalytic core of the F-type ATPase that produces ATP from ADP in the presence of a proton gradient across the membrane

Gene Ontology:  GO:0045261|GO:0046933|GO:0005524|GO:0005886
SCOP:  3000182|3000785

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
atpC PRK00571
F0F1 ATP synthase subunit epsilon; Validated
 1-135 8.90e-44

F0F1 ATP synthase subunit epsilon; Validated


:

Pssm-ID: 234796 [Multi-domain]  Cd Length: 135  Bit Score: 139.90  E-value: 8.90e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   1 MNTMALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAKI-DGRYEYFAVTEGFVEIRPERVSVL 79
Cdd:PRK00571   1 MATLTVDIVSPEGLIYSGE-VEEVVVPGTEGELGILPGHAPLLTALKPGVVRIKKdDGEEEVIAVSGGFLEVQPDKVTVL 79

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 518851349  80 IQAGEFAEDIDTARARQAKERAEQLLEQAKDEkVDRYRAELALNRAINRINVSEHA 135
Cdd:PRK00571  80 ADSAERADDIDEARAEEAKERAEEALENKHDD-VDYARAQAALARAIARLRVAEKL 134
 
Name Accession Description Interval E-value
atpC PRK00571
F0F1 ATP synthase subunit epsilon; Validated
 1-135 8.90e-44

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 234796 [Multi-domain]  Cd Length: 135  Bit Score: 139.90  E-value: 8.90e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   1 MNTMALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAKI-DGRYEYFAVTEGFVEIRPERVSVL 79
Cdd:PRK00571   1 MATLTVDIVSPEGLIYSGE-VEEVVVPGTEGELGILPGHAPLLTALKPGVVRIKKdDGEEEVIAVSGGFLEVQPDKVTVL 79

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 518851349  80 IQAGEFAEDIDTARARQAKERAEQLLEQAKDEkVDRYRAELALNRAINRINVSEHA 135
Cdd:PRK00571  80 ADSAERADDIDEARAEEAKERAEEALENKHDD-VDYARAQAALARAIARLRVAEKL 134
AtpC COG0355
FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP ...
 4-135 1.38e-41

FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP synthase, epsilon subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440124 [Multi-domain]  Cd Length: 131  Bit Score: 134.16  E-value: 1.38e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   4 MALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAKI-DGRYEYFAVTEGFVEIRPERVSVLIQA 82
Cdd:COG0355    1 LKLEIVTPERVLFSGE-VESVVAPGAEGEFGILPGHAPLLTALKPGVVRIRTeDGEEEYFAVSGGFLEVQPNKVTILADT 79

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 518851349  83 GEFAEDIDTARARQAKERAEQLLEQAKDEkVDRYRAELALNRAINRINVSEHA 135
Cdd:COG0355   80 AERAEDIDVERAEEAKERAEERLEEAKDD-IDYARAEAALARALARLRAAEKL 131
F1-ATPase_delta cd12152
mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, ...
 4-127 2.60e-36

mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain. In bacteria, which is lacking a eukaryotic epsilon subunit homolog, this subunit is called the epsilon subunit.


Pssm-ID: 213395 [Multi-domain]  Cd Length: 123  Bit Score: 120.69  E-value: 2.60e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   4 MALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAK-IDGRYEYFAVTEGFVEIRPERVSVLIQA 82
Cdd:cd12152    1 LKLEIVTPERVFFSGE-VESVVLPGTEGEFGILPGHAPLVTALKPGVLRIRdEDGEEKYFAVSGGFLEVTPNRVTILADE 79

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 518851349  83 GEFAEDIDTARARQAKERAEQLLEQAKDEKvDRYRAELALNRAIN 127
Cdd:cd12152   80 AERPEDIDVERAEEALERAEERLAQAKDER-EKARAEAALERALA 123
ATP_synt_epsi TIGR01216
ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five ...
 3-133 1.76e-31

ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five types of subunits in the F1 part of F1/F0 ATP synthases. Members of this family are designated epsilon in bacterial and chloroplast systems but designated delta in mitochondria, where the counterpart of the bacterial delta subunit is designated OSCP. In a few cases (Propionigenium modestum, Acetobacterium woodii) scoring above the trusted cutoff and designated here as exceptions, Na+ replaces H+ for translocation. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273506 [Multi-domain]  Cd Length: 130  Bit Score: 108.50  E-value: 1.76e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349    3 TMALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLR-AKIDGRYEYFAVTEGFVEIRPERVSVLIQ 81
Cdd:TIGR01216   1 TLKLEIVTPEGEIYSGE-VESVILPGSEGELGILPGHAPLITALKPGVVRiRKLGDDWEHIAVSGGFAEVQPDKVTILAD 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 518851349   82 AGEFAEDIDTARARQAKERAEQLLEQAKDeKVDRYRAELALNRAINRINVSE 133
Cdd:TIGR01216  80 GAVFADDIDEAEAEKALEAAEKLLESAED-DKDLAEALLKLKKARAQLEALE 130
ATP-synt_DE_N pfam02823
ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These ...
 4-79 4.72e-25

ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (pfam00213).


Pssm-ID: 460714 [Multi-domain]  Cd Length: 80  Bit Score: 90.57  E-value: 4.72e-25
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 518851349    4 MALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAK-IDGRYEYFAVTEGFVEIRPERVSVL 79
Cdd:pfam02823   1 LKLEIVTPERVVFSGE-VEMVVAPGAEGELGILPGHAPLLTALKPGVLRIKtEDGEEEYIAVSGGFLEVQPNKVTIL 76
 
Name Accession Description Interval E-value
atpC PRK00571
F0F1 ATP synthase subunit epsilon; Validated
 1-135 8.90e-44

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 234796 [Multi-domain]  Cd Length: 135  Bit Score: 139.90  E-value: 8.90e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   1 MNTMALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAKI-DGRYEYFAVTEGFVEIRPERVSVL 79
Cdd:PRK00571   1 MATLTVDIVSPEGLIYSGE-VEEVVVPGTEGELGILPGHAPLLTALKPGVVRIKKdDGEEEVIAVSGGFLEVQPDKVTVL 79

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 518851349  80 IQAGEFAEDIDTARARQAKERAEQLLEQAKDEkVDRYRAELALNRAINRINVSEHA 135
Cdd:PRK00571  80 ADSAERADDIDEARAEEAKERAEEALENKHDD-VDYARAQAALARAIARLRVAEKL 134
AtpC COG0355
FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP ...
 4-135 1.38e-41

FoF1-type ATP synthase, epsilon subunit [Energy production and conversion]; FoF1-type ATP synthase, epsilon subunit is part of the Pathway/BioSystem: FoF1-type ATP synthase


Pssm-ID: 440124 [Multi-domain]  Cd Length: 131  Bit Score: 134.16  E-value: 1.38e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   4 MALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAKI-DGRYEYFAVTEGFVEIRPERVSVLIQA 82
Cdd:COG0355    1 LKLEIVTPERVLFSGE-VESVVAPGAEGEFGILPGHAPLLTALKPGVVRIRTeDGEEEYFAVSGGFLEVQPNKVTILADT 79

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|...
gi 518851349  83 GEFAEDIDTARARQAKERAEQLLEQAKDEkVDRYRAELALNRAINRINVSEHA 135
Cdd:COG0355   80 AERAEDIDVERAEEAKERAEERLEEAKDD-IDYARAEAALARALARLRAAEKL 131
atpC PRK13446
F0F1 ATP synthase subunit epsilon; Provisional
 1-135 6.43e-41

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 184056 [Multi-domain]  Cd Length: 136  Bit Score: 132.77  E-value: 6.43e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   1 MNTMALDIVTPNGSVFSEEDCEIIiLQTKQGELGVMAGHVPTVSALKIGSLRAKIDGRYEYFAVTEGFVEIRPERVSVLI 80
Cdd:PRK13446   2 AKKLKLEIVTPEKKVLSEEVDEVG-APGVLGEFGVLPGHAPFLTALKIGELTYKKGGKTHYVAVNGGFAEVSNNKVTVLA 80

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 518851349  81 QAGEFAEDIDTARARQAKERAEQLLEQAKDEkVDRYRAELALNRAINRINVSEHA 135
Cdd:PRK13446  81 ETAERAEEIDVERARAALERAEQRLKKLTPE-DDSARAEAALERALIRLQVAGKA 134
F1-ATPase_delta cd12152
mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, ...
 4-127 2.60e-36

mitochondrial ATP synthase delta subunit; The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta, and epsilon subunits with a stoichiometry of 3:3:1:1:1. Alpha and beta subunit form the globular catalytic moiety, a hexameric ring of alternating subunits. Gamma, delta and epsilon subunits form a stalk, connecting F1 to F0, the integral membrane proton translocating domain. In bacteria, which is lacking a eukaryotic epsilon subunit homolog, this subunit is called the epsilon subunit.


Pssm-ID: 213395 [Multi-domain]  Cd Length: 123  Bit Score: 120.69  E-value: 2.60e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   4 MALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAK-IDGRYEYFAVTEGFVEIRPERVSVLIQA 82
Cdd:cd12152    1 LKLEIVTPERVFFSGE-VESVVLPGTEGEFGILPGHAPLVTALKPGVLRIRdEDGEEKYFAVSGGFLEVTPNRVTILADE 79

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*
gi 518851349  83 GEFAEDIDTARARQAKERAEQLLEQAKDEKvDRYRAELALNRAIN 127
Cdd:cd12152   80 AERPEDIDVERAEEALERAEERLAQAKDER-EKARAEAALERALA 123
ATP_synt_epsi TIGR01216
ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five ...
 3-133 1.76e-31

ATP synthase, F1 epsilon subunit (delta in mitochondria); This model describes one of the five types of subunits in the F1 part of F1/F0 ATP synthases. Members of this family are designated epsilon in bacterial and chloroplast systems but designated delta in mitochondria, where the counterpart of the bacterial delta subunit is designated OSCP. In a few cases (Propionigenium modestum, Acetobacterium woodii) scoring above the trusted cutoff and designated here as exceptions, Na+ replaces H+ for translocation. [Energy metabolism, ATP-proton motive force interconversion]


Pssm-ID: 273506 [Multi-domain]  Cd Length: 130  Bit Score: 108.50  E-value: 1.76e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349    3 TMALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLR-AKIDGRYEYFAVTEGFVEIRPERVSVLIQ 81
Cdd:TIGR01216   1 TLKLEIVTPEGEIYSGE-VESVILPGSEGELGILPGHAPLITALKPGVVRiRKLGDDWEHIAVSGGFAEVQPDKVTILAD 79

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 518851349   82 AGEFAEDIDTARARQAKERAEQLLEQAKDeKVDRYRAELALNRAINRINVSE 133
Cdd:TIGR01216  80 GAVFADDIDEAEAEKALEAAEKLLESAED-DKDLAEALLKLKKARAQLEALE 130
atpC PRK13450
F0F1 ATP synthase subunit epsilon; Provisional
 1-133 3.03e-25

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 184059 [Multi-domain]  Cd Length: 132  Bit Score: 92.90  E-value: 3.03e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   1 MNTMALDIVTPNgSVFSEEDCEIIILQTKQGELGVMAGHVPTVSALKIGSLR-AKIDGRYEYFAVTEGFVEIRPERVSVL 79
Cdd:PRK13450   1 ANNIKLTILTPE-KNFYIGEVKEVITEGLDGDIAILPNHVPLITYLKPTITKiIDENGEKKKIFTSSGVLKVENNEVYIL 79

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....
gi 518851349  80 IQAGEFAEDIDTARARQAKERAEQLLEQaKDEkVDRYRAELALNRAINRINVSE 133
Cdd:PRK13450  80 CDASEWPEEIDIKRAENAKKRAEERLRK-KDE-IDVKRAELALFRAIARIKLKE 131
ATP-synt_DE_N pfam02823
ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These ...
 4-79 4.72e-25

ATP synthase, Delta/Epsilon chain, beta-sandwich domain; Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. The subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (pfam00213).


Pssm-ID: 460714 [Multi-domain]  Cd Length: 80  Bit Score: 90.57  E-value: 4.72e-25
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 518851349    4 MALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAK-IDGRYEYFAVTEGFVEIRPERVSVL 79
Cdd:pfam02823   1 LKLEIVTPERVVFSGE-VEMVVAPGAEGELGILPGHAPLLTALKPGVLRIKtEDGEEEYIAVSGGFLEVQPNKVTIL 76
atpE CHL00063
ATP synthase CF1 epsilon subunit
 3-125 1.67e-23

ATP synthase CF1 epsilon subunit


Pssm-ID: 214351 [Multi-domain]  Cd Length: 134  Bit Score: 88.38  E-value: 1.67e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   3 TMALDIVTPNGSVFSEEDCEIIiLQTKQGELGVMAGHVPTVSALKIGSLRAKIDGRYEYFAVTEGFVEIRPERVSVLIQA 82
Cdd:CHL00063   2 TLNLRVLTPNRIVWDSEVEEII-LPTNSGQIGVLPNHAPIATALDIGVLRIRLNDQWLTMALMGGFARIGNNEITILVND 80

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|...
gi 518851349  83 GEFAEDIDTARARQAKERAEQLLEQAKDEKvDRYRAELALNRA 125
Cdd:CHL00063  81 AEKGSDIDPQEAQQTLEIAEANLEKAEGKK-QKIEANLALKRA 122
atpC PRK14735
F0F1 ATP synthase subunit epsilon; Provisional
 6-133 3.84e-20

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 173197 [Multi-domain]  Cd Length: 139  Bit Score: 80.04  E-value: 3.84e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   6 LDIVTPNGSVFSEeDCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAKIDGRYEYFAVTEGFVEIRPERVSVLIQAGEF 85
Cdd:PRK14735   5 LEIVTAERVVLSD-DVDMISAPTKDGRVGILPRHAPLLTILEPGELDIVKNGVRTPFAISGGFMEVLPHRVTILADTAER 83

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*...
gi 518851349  86 AEDIDTARARQAKERAEQLLEQAKDEKvDRYRAELALNRAINRINVSE 133
Cdd:PRK14735  84 ADEIDEARAEQARAEAEQRRRERQSEQ-DLALAEAKLRRAMVRLRVAQ 130
atpC PRK13452
F0F1 ATP synthase subunit epsilon; Provisional
 4-129 4.33e-15

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 106409 [Multi-domain]  Cd Length: 145  Bit Score: 67.08  E-value: 4.33e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   4 MALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAKIDGRYEYFAVTEGFVEIRPERVSVLIQAG 83
Cdd:PRK13452   6 LKVDVVSPLGSVFKGE-ADMVSLRGSAGEMGIAYGHTELLSTLPAGVVNVRKDQHTDVLYVSGGIVEVTPTRVTIMVDDM 84

                         90       100       110       120
                 ....*....|....*....|....*....|....*....|....*.
gi 518851349  84 EFAEDIDTARARQAKERAEQLLEQAKDEKVDRYRAELALNRAINRI 129
Cdd:PRK13452  85 ERAENLNQAEAEKARARAKEVLKNPDASKLDIEAANKRLKEADARL 130
ATP-synt_DE pfam00401
ATP synthase, Delta/Epsilon chain, long alpha-helix domain; Part of the ATP synthase CF(1). ...
 87-131 5.52e-14

ATP synthase, Delta/Epsilon chain, long alpha-helix domain; Part of the ATP synthase CF(1). These subunits are part of the head unit of the ATP synthase. This subunit is called epsilon in bacteria and delta in mitochondria. In bacteria the delta (D) subunit is equivalent to the mitochondrial Oligomycin sensitive subunit, OSCP (pfam00213).


Pssm-ID: 459802  Cd Length: 45  Bit Score: 61.63  E-value: 5.52e-14
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*
gi 518851349   87 EDIDTARARQAKERAEQLLEQAKDEKVDRYRAELALNRAINRINV 131
Cdd:pfam00401   1 EDIDVARAEEAKERAEERLAQAKQDDIDYARAQAALARALARLQA 45
atpC PRK13448
F0F1 ATP synthase subunit epsilon; Provisional
 1-130 2.30e-11

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 139579 [Multi-domain]  Cd Length: 135  Bit Score: 57.09  E-value: 2.30e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   1 MNTMALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAKIDGRYEYFAVTEGFVEIRPERVSVLI 80
Cdd:PRK13448   1 MATFHFDLVSPEKLAFSGE-VDQVDIPGVEGDFGVLAGHAPVVAVIRPGILTVTAGGNQQKIVVLGGLAEVSEKGLTVLA 79

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|.
gi 518851349  81 QAGEFAEDIDTAR-ARQAKERAEQLLEQAKDEkvdryraelaLNRAINRIN 130
Cdd:PRK13448  80 DVATSVADLDLAQfAATIAEMEAQLAGKVGDE----------LDRAIERLD 120
atpC PRK13442
F0F1 ATP synthase subunit epsilon; Provisional
 1-87 2.50e-11

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 184055 [Multi-domain]  Cd Length: 89  Bit Score: 55.79  E-value: 2.50e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   1 MNTMALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSL-RAKIDGRYEYFAVTEGFVEIRPERVSVL 79
Cdd:PRK13442   3 GATLHVNIVAADRPVWSGE-ATMVVARTTEGDIGILPGHEPLLGVLESGTVtVVTPGGERISAAVDGGFISFDSNKLTVL 81


                 ....*...
gi 518851349  80 IQAGEFAE 87
Cdd:PRK13442  82 AERAELVA 89
atpC PRK13444
F0F1 ATP synthase subunit epsilon; Provisional
 2-133 2.84e-11

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 139576 [Multi-domain]  Cd Length: 127  Bit Score: 56.81  E-value: 2.84e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   2 NTMALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAKIDGRYEYFAVTEGFVEIRPERVSVLIQ 81
Cdd:PRK13444   4 KKLTVSVISPEKILYKGE-VDSLIVPGSEGFFGILPNHAPLVATLGIGLLEIRKGEKLKRISVEGGFCEVKDNQISILTD 82

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 518851349  82 AGEFAEDIDTARARQAKERAEQLleQAKDEKvdryraELALNRAINRINVSE 133
Cdd:PRK13444  83 HGALKEDIDHEHEKKLLAEAEKL--PPSDSK------NLLLQKTKTRILVAS 126
atpC PRK13451
F0F1 ATP synthase subunit epsilon; Provisional
 4-103 4.68e-10

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 172059  Cd Length: 101  Bit Score: 52.87  E-value: 4.68e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   4 MALDIVTPNGSVFsEEDCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAKI-DGRYEYfAVTEGFVEIRPERVSVLIQA 82
Cdd:PRK13451   1 MKVKIVTPYGIVY-DRESDFVSFRTVEGEMGILPRRAPIIAKLSVCDVKIKSgDDEYEY-KVADGFLHCDGKNVIIITEE 78

                         90       100
                 ....*....|....*....|.
gi 518851349  83 GEFAEDIDTARARQAKERAEQ 103
Cdd:PRK13451  79 AGREEEISPHRYLGARERVER 99
atpC PRK13443
F0F1 ATP synthase subunit epsilon; Provisional
 2-111 6.03e-10

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 237388 [Multi-domain]  Cd Length: 136  Bit Score: 53.39  E-value: 6.03e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   2 NTMALDIVTPNGSVFSEEDCEIIILQTkQGELGVMAGHVPTVSALKIGSLRAK-IDGRYEYfAVTEGFVEIRPERVSVLI 80
Cdd:PRK13443   3 GTLQFDLVSPERRLASFQATAVQIPGA-DGDMTAMEGHAPTITTLRPGILRAHgPSGTQEY-AVTGGFAEINATSISVLA 80

                         90       100       110
                 ....*....|....*....|....*....|.
gi 518851349  81 QAGEFAEDIDTARARQAKERAEQLLEQAKDE 111
Cdd:PRK13443  81 EKAIPVEELTGAVLDEFIAEARELASVALPE 111
atpC PRK13449
ATP synthase F1 subunit epsilon;
1-79 9.58e-08

ATP synthase F1 subunit epsilon;


Pssm-ID: 184058 [Multi-domain]  Cd Length: 88  Bit Score: 46.69  E-value: 9.58e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   1 MNTMALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSLR--AKIDGRYEYFAVTEGFVEIRPERVSV 78
Cdd:PRK13449   1 MAKLHFELVTPERLLRSGE-VDMVVVPGTEGDFGVLAGHAPFMTTLREGEVTvySSDGAAPEVFHVQGGFAEVNEKGLTI 79


                 .
gi 518851349  79 L 79
Cdd:PRK13449  80 L 80
atpC PRK14736
F0F1 ATP synthase subunit epsilon; Provisional
 1-79 3.61e-06

F0F1 ATP synthase subunit epsilon; Provisional


Pssm-ID: 173198 [Multi-domain]  Cd Length: 133  Bit Score: 43.24  E-value: 3.61e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 518851349   1 MNTMALDIVTPNGSVFSEEdCEIIILQTKQGELGVMAGHVPTVSALKIGSL---RAKIDGRYEYfaVTEGFVEIRPERVS 77
Cdd:PRK14736   1 MATFHFDLVGPERTLYSGE-VEAVQLPGSEGEMTVLPGHAPVLTTLKVGVItvtETTGNGKRIY--VRGGFAEIGPTSVT 77


                 ..
gi 518851349  78 VL 79
Cdd:PRK14736  78 VL 79
atpC PRK01474
F0F1 ATP synthase subunit epsilon; Validated
 1-71 9.10e-05

F0F1 ATP synthase subunit epsilon; Validated


Pssm-ID: 100879  Cd Length: 112  Bit Score: 39.09  E-value: 9.10e-05
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 518851349   1 MN-TMALDIVTPNGSVFsEEDCEIIILQTKQGELGVMAGHVPTVSALKIGSLRAKIDGRYEY---FAVTEGFVEI 71
Cdd:PRK01474   1 MNeTILVKIITPLSIAF-EKQAKMVTMPGEEGMFGVLPSHVPMIVSLKAGLVQVYIDDMHKSentYLISGGVTEV 74
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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