|
Name |
Accession |
Description |
Interval |
E-value |
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
20-746 |
3.29e-107 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 342.38 E-value: 3.29e-107
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 20 QPERIRDDELDLLRLWQPIWRRKWSIATLMLVVMMLATLVALAMTPVYRAASTLMIEEKAAQVLsIQQVyGLDGNSSGYL 99
Cdd:COG3206 6 SAPPEEEDEIDLRDLLRILRRRKWLILLVFLLVLALALLYALLLPPVYEASATLLVEPQSSDVL-LSGL-SSLSASDSPL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 100 QTQFELLKSRELAERVVHELSLNTHPefdprqqsaslidirglldfnawlpfttpedvaevdpeLAEAQAFRAAVDTFMK 179
Cdd:COG3206 84 ETQIEILKSRPVLERVVDKLNLDEDP--------------------------------------LGEEASREAAIERLRK 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 180 RTTITPVPKTQLVKVQIEMADASTAARAANALARTYIDSQMEAKLEMTNNATRWINERLETLKVSLQESERQLQAFRDQE 259
Cdd:COG3206 126 NLTVEPVKGSNVIEISYTSPDPELAAAVANALAEAYLEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKN 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 260 NLVDLQGGVTTVSAgELSRTSDRLVDTRRDRDAAESQYRQVAELKGGGWQrltAAPAVMSNPLVQQFKAQEAQALSKVQE 339
Cdd:COG3206 206 GLVDLSEEAKLLLQ-QLSELESQLAEARAELAEAEARLAALRAQLGSGPD---ALPELLQSPVIQQLRAQLAELEAELAE 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 340 LSNRYGPKHPSMIAARSELNTATASLKSQVEQVVASIERAYQLAVANEDALQSSFELNKDEIQAITRKEFKLRELQREVD 419
Cdd:COG3206 282 LSARYTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVE 361
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 420 SNQALYNTFLNRLKETSATADLQSANARIVDRAVRPEVPVKPNRKLIVIAAGLLALMAGVGLALLLEMLNNTFKSTEEIE 499
Cdd:COG3206 362 VARELYESLLQRLEEARLAEALTVGNVRVIDPAVVPLKPVSPKKLLILALGLLLGLLLGLGLALLLELLDRTIEEELELL 441
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 500 EQLNLPVLGILPLLKDKLRKDVAQMFGRggeTDRAFLEAIRTLRTGVVLSGLNKEQKVLLVTSSIPGEGKSSVAANLAQA 579
Cdd:COG3206 442 LLLGLPLLGPLPPLKSKRERRRARLALL---LLAAALAALLALLLALLLLLLLLLLLLLVSSSSGGGSSSTSSALAAASA 518
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 580 LGQMEKVLLIDADMRRPTAAKNFELPVGTPGLANLIAGIAKLEDCIYPLDGVDLISAGTVPPNPLELLSSKRFAETLEVL 659
Cdd:COG3206 519 AAAAAAALLLLLLLLLLLDLLLLLLLLLLLLLLLLGGLLLLLLLLLLLLLLLLLLLLLLLLLLPPPLLLPLLLLLLLLLL 598
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 660 GSKYDHIIIDSPPMQAVSDALMLSALASSVIYVVKAESTSVQLVRDGIGRLLQNRAPVSGVVLNQVDIEKAKKNGYSHGA 739
Cdd:COG3206 599 LLLLLLLLLLSDDLILDLVPLLAALLAAAVLAVLVVVLLLVVALVALARLALLAAALLLLLVLVVVGGVVLGGVVYGYYY 678
|
....*..
gi 522173320 740 YYDYGYS 746
Cdd:COG3206 679 YYYYYYY 685
|
|
| eps_transp_fam |
TIGR01005 |
exopolysaccharide transport protein family; The model describes the exopolysaccharide ... |
26-748 |
1.05e-79 |
|
exopolysaccharide transport protein family; The model describes the exopolysaccharide transport protein family in bacteria. The transport protein is part of a large genetic locus which is associated with exopolysaccharide (EPS) biosynthesis. Detailed molecular characterization and gene fusion analysis revealed atleast seven gene products are involved in the overall regulation, which among other things, include exopolysaccharide biosynthesis, property of conferring virulence and exopolysaccharide export. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273391 [Multi-domain] Cd Length: 764 Bit Score: 271.21 E-value: 1.05e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 26 DDELDLLRLWQPIWRRKWSIATLMLVVMMLATLVALAMTPVYRAASTLMIEEKAAQVLSIQQvyglDGNSSGYLQTQ--- 102
Cdd:TIGR01005 1 DGEIDLDRLLAALFANARLIAAFAAAFIALGAAYAFFARPVYEADIMILLDDNLNKAAEEEG----DPSNLFDLDTDaaa 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 103 -FELLKSRELAERVVHELSL--NTHPEFDPR----------QQSASLIDIRGLLDFNAWLPFTTPEDVAEVD-PELAEAQ 168
Cdd:TIGR01005 77 aIEILKSGELAGKAVDKLHLseNAKILNPPRfpvdligawiKSAAGLFSEPGGFDLGEEAAGNERIDKAAADiPEALAGE 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 169 afraavdtfmkrttitPVPKTQLVKVQIEMADASTAARAANALARTYIDSQMEAKLEMTNNATRWINERLETLKVSLQES 248
Cdd:TIGR01005 157 ----------------PFKLISLGAGAFRLEDKLLAAPIAGGVAEALEADQLIANFEAQENALTAKAEALFDLEQDSQAA 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 249 ERQLQAFRDQENLVDLQGGVttVSAGELSRTSDRLVDTRRDRDAAESQYRQVAELKGGGWQRL----TAAPAVMSNPLVQ 324
Cdd:TIGR01005 221 ALEMAHDKAEIAEKAAQGEI--IGEAQLADLNPALIAAIADQAAAEARADNIKRIADEAEENAvflaGILPKEGDELEIA 298
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 325 QFKAQEAQALSKVQELSNRYGPKHPSMIAARSELNTATASLKSQVEQVVASIERAYQLAVANEDALQSSFELNKDEIQAI 404
Cdd:TIGR01005 299 DLKTNELRNGKGEFDLSDEFGADHPEAVCSAPSLQELKAKIAEELQQFTASHKGEQAIAQQIEESLRGKINGIAGKLKDA 378
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 405 TRKEFKLRELQREVDSNQALYNTFLNRLKETSATADLQSANARIVDRAVRPEVPVKPNRKLIVIAAGLLALMAGVGLALL 484
Cdd:TIGR01005 379 PEIEQDLRELEQDAAADKELYESLLGDMEQAKLQKAFKIAKARLIDEAAVPEEPSKPKKLMTLALAAVLGMMLGGAAAAF 458
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 485 LEMLNNTFKSTEEIEEQLNLPVLGILPLLKDKLRKD---VAQMFGRGGETDRA---------------------FLEAIR 540
Cdd:TIGR01005 459 LEALEGGFRDEGDIEEHLGHRSLATVPLLDTQMDKKaqlTHAHFGSVKRHDEAvddtmpfqllarivpdaprstFAEAFR 538
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 541 TLRTGVVLSGLNKEQKVLLVTSSIPGEGKSSVAANLAQALGQMEK-VLLIDADMRRPTAAKNFElPVGTPGLANLIAGIA 619
Cdd:TIGR01005 539 NAKLACDFALADAENNLIAIAGALPDEGKSFIAANFAALIAAGGKrTLLIDADIRKGGLHQMFG-KAPKPGLLDLLAGEA 617
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 620 KLEDCIY--PLDGVDLISAGTV---PPNPLELLSSKRFAETLEVLGSKYDHIIIDSPPMQAVSDALMLSALASSVIYVVK 694
Cdd:TIGR01005 618 SIEAGIHrdQRPGLAFIAAGGAshfPHNPNELLANPAMAELIDNARNAFDLVLVDLAALAAVADAAAFAALADGILFVTE 697
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 522173320 695 AESTSVQLVRDGIGRLLQNRAPVSGVVLNQVDIEKAKKNGYSHGA----YYDYGYSSD 748
Cdd:TIGR01005 698 FERSPLGEIRDLIHQEPHANSDVLGVIFNALDMNELGKYGDFDGAekyrHRQGGYTSE 755
|
|
| BY-kinase |
cd05387 |
bacterial tyrosine-kinase; Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on ... |
537-724 |
2.66e-66 |
|
bacterial tyrosine-kinase; Bacterial tyrosine (BY)-kinases catalyze the autophosphorylation on a C-terminal tyrosine cluster and also phosphorylate endogenous protein substrates by using ATP as phosphoryl donor. Besides their capacity to function as tyrosine kinase, most of these proteins are also involved in the production and transport of exopolysaccharides. BY-kinases are involved in a number of physiological processes ranging from stress resistance to pathogenicity.
Pssm-ID: 349772 [Multi-domain] Cd Length: 190 Bit Score: 217.44 E-value: 2.66e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 537 EAIRTLRTGVVLSGLNKEQKVLLVTSSIPGEGKSSVAANLAQALGQM-EKVLLIDADMRRPTAAKNFELPvGTPGLANLI 615
Cdd:cd05387 1 EAFRTLRTNLLFAGSDAGPKVIAVTSASPGEGKSTVAANLAVALAQSgKRVLLIDADLRRPSLHRLLGLP-NEPGLSEVL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 616 AGIAKLEDCIY--PLDGVDLISAGTVPPNPLELLSSKRFAETLEVLGSKYDHIIIDSPPMQAVSDALMLSALASSVIYVV 693
Cdd:cd05387 80 SGQASLEDVIQstNIPNLDVLPAGTVPPNPSELLSSPRFAELLEELKEQYDYVIIDTPPVLAVADALILAPLVDGVLLVV 159
|
170 180 190
....*....|....*....|....*....|.
gi 522173320 694 KAESTSVQLVRDGIGRLLQNRAPVSGVVLNQ 724
Cdd:cd05387 160 RAGKTRRREVKEALERLEQAGAKVLGVVLNK 190
|
|
| Mrp |
COG0489 |
Fe-S cluster carrier ATPase, Mrp/ApbC/NBP35 family [Cell cycle control, cell division, ... |
481-751 |
3.18e-60 |
|
Fe-S cluster carrier ATPase, Mrp/ApbC/NBP35 family [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440255 [Multi-domain] Cd Length: 289 Bit Score: 205.04 E-value: 3.18e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 481 LALLLEMLNNTFKSTEEIEEQLNLPVLGILPLLKDKLRKDVAQMFGRGGETDRAFLEAIRTLRTGVVLSGLNKEQKVLLV 560
Cdd:COG0489 18 LLLLLLLLLLLLRLEEAAAAAALAAAAPAAAAPAPLPPAPALLLLLLLLLGLLLLLLLALALLLLLLLLLLRLLLEVIAV 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 561 TSSIPGEGKSSVAANLAQALGQM-EKVLLIDADMRRPTAAKNFELPvGTPGLANLIAGIAKLEDCIYPL--DGVDLISAG 637
Cdd:COG0489 98 TSGKGGEGKSTVAANLALALAQSgKRVLLIDADLRGPSLHRMLGLE-NRPGLSDVLAGEASLEDVIQPTevEGLDVLPAG 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 638 TVPPNPLELLSSKRFAETLEVLGSKYDHIIIDSPPMQAVSDALMLSALASSVIYVVKAESTSVQLVRDGIGRLLQNRAPV 717
Cdd:COG0489 177 PLPPNPSELLASKRLKQLLEELRGRYDYVIIDTPPGLGVADATLLASLVDGVLLVVRPGKTALDDVRKALEMLEKAGVPV 256
|
250 260 270
....*....|....*....|....*....|....
gi 522173320 718 SGVVLNQVDIEKAKKngYSHGAYYDYGYSSDQPA 751
Cdd:COG0489 257 LGVVLNMVCPKGERY--YGGGEEYGYREYGDREI 288
|
|
| PRK11519 |
PRK11519 |
tyrosine-protein kinase Wzc; |
27-748 |
9.42e-54 |
|
tyrosine-protein kinase Wzc;
Pssm-ID: 183173 [Multi-domain] Cd Length: 719 Bit Score: 198.07 E-value: 9.42e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 27 DELDLLRLWQPIWRRKWSIATLMLVVMMLATLVALAMTPVYRAASTLMIEEKAAQVLsIQQVYGLDGNSSGYLQTQFELL 106
Cdd:PRK11519 16 DEIDIGRLVGTVIEARWWVIGITAVFALCAVVYTFFATPIYSADALVQIEQNSGNSL-VQDIGSALANKPPASDAEIQLI 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 107 KSRELAERVVHELSL------NTHPEFDP-----RQQSASLIDIRGLLDFNAWL--PFT-----------TPEDVAEV-- 160
Cdd:PRK11519 95 RSRLVLGKTVDDLDLdiavskNTFPIFGAgwdrlMGRQNETVKVTTFNRPKEMAdqVFTlnvlddknyqlSSDGGFSArg 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 161 ----------------DPELAEAQAFR-------AAVDTFMKRTTITPVPK-TQLVKVQIEMADASTAARAANALARTYI 216
Cdd:PRK11519 175 qvgqmlkkdgvtlmveAIHARPGTEFTvtkystlGMINNLQNNLTVTENGKdTGVLSLTYTGEDREQIRDILNSITRNYL 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 217 DSQMEAKLEMTNNATRWINERLETLKVSLQESERQLQAFRDQENLVDLqggvttvsagelSRTSDRLVDTRRDRDAaesq 296
Cdd:PRK11519 255 EQNIERKSEEASKSLAFLAQQLPEVRSRLDVAENKLNAFRQDKDSVDL------------PLEAKAVLDSMVNIDA---- 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 297 yrQVAELKgggwqrltaapavmsnplvqqFKaqEAqalskvqELSNRYGPKHPsmiaarselntataslksqveqvvasi 376
Cdd:PRK11519 319 --QLNELT---------------------FK--EA-------EISKLYTKEHP--------------------------- 339
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 377 erAYQLAVANEDALQSSFELNKDEIQAITRKEFKLRELQREVDSNQALYNTFLNRLKETSATADLQSANARIVDRAVRPE 456
Cdd:PRK11519 340 --AYRTLLEKRKALEDEKAKLNGRVTAMPKTQQEIVRLTRDVESGQQVYMQLLNKQQELKITEASTVGDVRIVDPAITQP 417
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 457 VPVKPNRKLIVIAAGLLALMAGVGLALLLEMLNNTFKSTEEIEEqLNLPVLGILPL------------LKDKLRKDVAQM 524
Cdd:PRK11519 418 GVLKPKKALIILGAIILGLMLSIVGVLLRSLFNRGIESPQVLEE-HGISVYASIPLsewqkardsvktIKGIKRYKQSQL 496
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 525 FGRGGETDRAfLEAIRTLRTGVVLSGLNKEQKVLLVTSSIPGEGKSSVAANLAQALGQMEK-VLLIDADMRRPTAaknFE 603
Cdd:PRK11519 497 LAVGNPTDLA-IEAIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKrVLLIDCDMRKGYT---HE 572
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 604 LpVGT---PGLANLIAGIAKLEDCIYP--LDGVDLISAGTVPPNPLELLSSKRFAETLEVLGSKYDHIIIDSPPMQAVSD 678
Cdd:PRK11519 573 L-LGTnnvNGLSDILIGQGDITTAAKPtsIANFDLIPRGQVPPNPSELLMSERFAELVNWASKNYDLVLIDTPPILAVTD 651
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 679 ALMLSALASSVIYVVKAESTSVQLVRDGIGRLLQNRAPVSGVVLNQVdIEKAKknGYSHGAYYDYGYSSD 748
Cdd:PRK11519 652 AAIVGRHVGTTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILNSI-FRRAS--AYQDYGYYEYEYKSD 718
|
|
| PRK09841 |
PRK09841 |
tyrosine-protein kinase; |
26-749 |
9.49e-54 |
|
tyrosine-protein kinase;
Pssm-ID: 182106 [Multi-domain] Cd Length: 726 Bit Score: 198.21 E-value: 9.49e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 26 DDELDLLRLWQPIWRRKWSIATLMLVVMMLATLVALAMTPVYRAASTLMIEEKAAQVLsIQQVYGLDGNSSGYLQTQFEL 105
Cdd:PRK09841 15 ENEIDLLRLVGELWDHRKFIISVTALFTLIAVAYSLLSTPIYQADTLVQVEQKQGNAI-LSGLSDMIPNSSPESAPEIQL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 106 LKSRELAERVVHELSLNTHPEfdprQQSASLIDiRGLLDFNAWLPFTTPEDVAEVDP----------ELAEAQAFRAAVD 175
Cdd:PRK09841 94 LQSRMILGKTIAELNLRDIVE----QKYFPIVG-RGWARLTKEKPGELAISWMHIPQlngqdqqltlTVGENGHYTLEGE 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 176 TFMKR----------------TTITPVPKTQLVKVQiemaDASTAARAANALARTYIDSQMEA---KLEMTNNATRWINE 236
Cdd:PRK09841 169 EFTVNgmvgqrlekdgvaltiADIKAKPGTQFVLSQ----RTELEAINALQETFTVSERSKESgmlELTMTGDDPQLITR 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 237 RLETLKVSLQESERQLQAFRDQENLVDLQGGVTTVSAgELSRTSDRLVDTRRDRDAAESQYRQVAELKgggwqrltaaPA 316
Cdd:PRK09841 245 ILNSIANNYLQQNIARQAAQDSQSLEFLQRQLPEVRS-ELDQAEEKLNVYRQQRDSVDLNLEAKAVLE----------QI 313
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 317 VMSNPLVQQFKAQEAqalskvqELSNRYGPKHPSMIAARSELNTATaslksqveqvvasierayqlavanedalQSSFEL 396
Cdd:PRK09841 314 VNVDNQLNELTFREA-------EISQLYKKDHPTYRALLEKRQTLE----------------------------QERKRL 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 397 NKdEIQAITRKEFKLRELQREVDSNQALYNTFLNRLKETSATADLQSANARIVDRAVRPEVPVKPNRKLIVIAAGLLALM 476
Cdd:PRK09841 359 NK-RVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNRQQELSISKSSAIGNVRIIDPAVTQPQPVKPKKALNVVLGFILGLF 437
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 477 AGVGLALLLEMLNNTFKSTEEIEEQlNLPVLGILPLL-----KDKLRKDvaQMFGRGGE----------TDR---AFLEA 538
Cdd:PRK09841 438 ISVGAVLARAMLRRGVEAPEQLEEH-GISVYATIPMSewldkRTRLRKK--NLFSNQQRhrtknipflaVDNpadSAVEA 514
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 539 IRTLRTGVVLSGLNKEQKVLLVTSSIPGEGKSSVAANLAQALGQM-EKVLLIDADMRRPTAAKNFELPvGTPGLANLIAG 617
Cdd:PRK09841 515 VRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSdQKVLFIDADLRRGYSHNLFTVS-NEHGLSEYLAG 593
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 618 IAKLEDCI--YPLDGVDLISAGTVPPNPLELLSSKRFAETLEVLGSKYDHIIIDSPPMQAVSDALMLSALASSVIYVVKA 695
Cdd:PRK09841 594 KDELNKVIqhFGKGGFDVITRGQVPPNPSELLMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARF 673
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 522173320 696 ESTSVQLVRDGIGRLLQNRAPVSGVVLNqvDIEKAKKNGYSHG-AYYDYGYSSDQ 749
Cdd:PRK09841 674 GLNTAKEVSLSMQRLEQAGVNIKGAILN--GVIKRASTAYSYGyNYYGYSYSEKE 726
|
|
| eps_fam |
TIGR01007 |
capsular exopolysaccharide family; This model describes the capsular exopolysaccharide ... |
537-744 |
3.62e-50 |
|
capsular exopolysaccharide family; This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Pssm-ID: 273392 [Multi-domain] Cd Length: 204 Bit Score: 174.55 E-value: 3.62e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 537 EAIRTLRTGVVLSGlnKEQKVLLVTSSIPGEGKSSVAANLAQALGQM-EKVLLIDADMRRPTAAKNFELPVGTPGLANLI 615
Cdd:TIGR01007 1 EYYNAIRTNIQFSG--AEIKVLLITSVKPGEGKSTTSANIAIAFAQAgYKTLLIDGDMRNSVMSGTFKSQNKITGLTNFL 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 616 AGIAKLED--CIYPLDGVDLISAGTVPPNPLELLSSKRFAETLEVLGSKYDHIIIDSPPMQAVSDALMLSALASSVIYVV 693
Cdd:TIGR01007 79 SGTTDLSDaiCDTNIENLDVITAGPVPPNPTELLQSSNFKTLIETLRKRFDYIIIDTPPIGTVTDAAIIARACDASILVT 158
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 522173320 694 KAESTSVQLVRDGIGRLLQNRAPVSGVVLNQVDIEKAKkngysHGAYYDYG 744
Cdd:TIGR01007 159 DAGKIKKREVKKAKEQLEQAGSNFLGVVLNKVDISVSK-----YGYYGYYG 204
|
|
| EpsF |
TIGR03017 |
chain length determinant protein EpsF; Sequences in this family of proteins are members of the ... |
38-510 |
3.14e-42 |
|
chain length determinant protein EpsF; Sequences in this family of proteins are members of the chain length determinant family (pfam02706) which includes the wzc protein from E.coli. This family of proteins are homologous to the EpsF protein of the methanolan biosynthesis operon of Methylobacillus species strain 12S. The distribution of this protein appears to be restricted to a subset of exopolysaccharide operons containing a syntenic grouping of genes including a variant of the EpsH exosortase protein. Exosortase has been proposed to be involved in the targetting and processing of proteins containing the PEP-CTERM domain to the exopolysaccharide layer.
Pssm-ID: 132062 [Multi-domain] Cd Length: 444 Bit Score: 159.59 E-value: 3.14e-42
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 38 IWRRKWSIATLMLVVMMLATLVALAMTPVYRAASTLMIEEKAAQVLSIQQVYGLdgNSSGYLQTQFELLKSRELAERVVH 117
Cdd:TIGR03017 10 LKARYWIVLFTLLITVTTTAVVSLLLPKEYTATTSVVLDYKGPDPVTGMVLPGQ--MSPGYMATQVDIINSDRVAKKVVD 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 118 ELSLNTHPEFdpRQQSASLIDIRGLLDFnaWLpfttpedvaevdpelaeaqafraaVDTFMKRTTITPVPKTQLVKVQIE 197
Cdd:TIGR03017 88 KLKLDENPAV--KEKFEEATGGQGSLKE--WL------------------------ADLLLKKLEVKPSRESSVISIEFS 139
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 198 MADASTAARAANALARTYIDSQMEAKLEMTNNATRWINERLETLKVSLQESERQLQAFRDQENLVDLQGGVtTVSAGELS 277
Cdd:TIGR03017 140 GVDPRFAATVANAFAQAYIDTNIELKVEPAQKAALWFVQQIAALREDLARAQSKLSAYQQEKGIVSSDERL-DVERARLN 218
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 278 RTSDRLVdtrrdrdAAESQYRQvAELKGGGWQRLTAAPAVMSNPLVQQFKAQEAQALSKVQELSNRYGPKHPSMIAARSE 357
Cdd:TIGR03017 219 ELSAQLV-------AAQAQVMD-ASSKEGGSSGKDALPEVIANPIIQNLKTDIARAESKLAELSQRLGPNHPQYKRAQAE 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 358 LNTATASLKSQVEQVVASIERAYQLAVANEDALQSSFELNKDEIQAITRKEFKLRELQREVDSNQALYNTFLNRLKETSA 437
Cdd:TIGR03017 291 INSLKSQLNAEIKKVTSSVGTNSRILKQREAELREALENQKAKVLELNRQRDEMSVLQRDVENAQRAYDAAMQRYTQTRI 370
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 522173320 438 TADLQSANARIVDRAVRPEVPVKPNRKLIVIAAGLLALMAGVGLALLLEMLNNTFKSTEEIEEQLNLPVLGIL 510
Cdd:TIGR03017 371 EAQSNQTDISILNPAVPPLEPSSPRLLLNLVLSIFLGMLLGIGFAFLAELMDRRVRSADDIIEALDVPVLATI 443
|
|
| pepcterm_ChnLen |
TIGR03007 |
polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; Members of this ... |
29-519 |
3.15e-36 |
|
polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; Members of this protein family belong to the family of polysaccharide chain length determinant proteins (pfam02706). All are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria, and are found near the epsH homolog that is the putative exosortase gene. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
Pssm-ID: 274386 [Multi-domain] Cd Length: 498 Bit Score: 143.27 E-value: 3.15e-36
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 29 LDLLRLWQPIWRRKWSIATLMLVVMMLATLVALAMTPVYRAASTLMIEEK----------AAQVLSIQQVYGLDgnssgy 98
Cdd:TIGR03007 1 EQLLSYLKGIWRRRWLFVAVAWVVMIVGWGVVYFLPDRYEASARVYVDTQsvlrpllkgiAVTPNVDQKIRIMS------ 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 99 lqtqfELLKSRELAERVVHELSLnthpefdprqqsaslidirglldfnaWLPFTTPEDvaevdpelaeaqaFRAAVDTFM 178
Cdd:TIGR03007 75 -----RTLLSRPNLEKVIRMLDL--------------------------DLGAKSPAQ-------------LEALITKLR 110
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 179 KRTTITPVPKTQLVKVQIEMADASTAARAANALARTYIDSQMEAKLEMTNNATRWINERLETLKVSLQESERQLQAFRdQ 258
Cdd:TIGR03007 111 KNISISLAGRDNLFTISYEDKDPELAKDVVQTLLTIFVEETLGSKRQDSDSAQRFIDEQIKTYEKKLEAAENRLKAFK-Q 189
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 259 ENLVDLQGGVTTVSAgELSRTSDRLVDTRRDRDAAESQYRQVAELKGGGWQRLTAAPAVMSNPLVQQFKAQEAQalskVQ 338
Cdd:TIGR03007 190 ENGGILPDQEGDYYS-EISEAQEELEAARLELNEAIAQRDALKRQLGGEEPVLLAGSSVANSELDGRIEALEKQ----LD 264
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 339 ELSNRYGPKHPSMIAARSELNTATASLKSQVEQVVASIER-------------AYQLAVAN-------EDALQSSFELNK 398
Cdd:TIGR03007 265 ALRLRYTDKHPDVIATKREIAQLEEQKEEEGSAKNGGPERgeianpvyqqlqiELAEAEAEiaslearVAELTARIERLE 344
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 399 DEIQAITRKEFKLRELQREVDSNQALYNTFLNRLK--ETSATADLQSANA--RIVDRAVRPEVPVKPNRKLIVIAAGLLA 474
Cdd:TIGR03007 345 SLLRTIPEVEAELTQLNRDYEVNKSNYEQLLTRREsaEVSKQMEVQDKAVsfRIIDPPIVPSKPSGPNRPLLMLAGLLGG 424
|
490 500 510 520
....*....|....*....|....*....|....*....|....*
gi 522173320 475 LMAGVGLALLLEMLNNTFKSTEEIEEQLNLPVLGILPLLKDKLRK 519
Cdd:TIGR03007 425 LGAGIGLAFLLSQLRPTVRSVRDLRELTGLPVLGVIPMIATPEER 469
|
|
| pepcterm_TyrKin |
TIGR03018 |
exopolysaccharide/PEP-CTERM locus tyrosine autokinase; Members of this protein family are ... |
557-723 |
3.41e-30 |
|
exopolysaccharide/PEP-CTERM locus tyrosine autokinase; Members of this protein family are related to a known protein-tyrosine autokinase and to numerous homologs from exopolysaccharide biosynthesis region proteins, many of which are designated as chain length determinants. Most members of this family contain a short region, immediately C-terminal to the region modeled here, with an abundance of Tyr residues. These C-terminal tyrosine residues are likely to be autophosphorylation sites. Some members of this family are fusion proteins.
Pssm-ID: 274392 [Multi-domain] Cd Length: 207 Bit Score: 118.17 E-value: 3.41e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 557 VLLVTSSIPGEGKSSVAANLAQALGQ-MEK-VLLIDADMRRPTAAKNFELPvGTPGLANLIA-GIAKLEDCIYP--LDGV 631
Cdd:TIGR03018 37 LIMVTSSLPGEGKSFTAINLAISLAQeYDKtVLLIDADLRRPSLHRTLGLE-AEPGLSDCLLdPVLDLADVLVPtnIGRL 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 632 DLISAGTVPPNPLELLSSKRFAETLEVLGSKYD--HIIIDSPPMQAVSDALMLSALASSVIYVVKAESTSVQLVRDGIGR 709
Cdd:TIGR03018 116 SLLPAGRRHPNPTELLASQRMRSLLHELARRYPdrIIIIDTPPLLVFSEARALARLVGQIVLVVEEGRTTQEAVKEALSA 195
|
170
....*....|....
gi 522173320 710 LlqNRAPVSGVVLN 723
Cdd:TIGR03018 196 L--ESCKVLGVVLN 207
|
|
| YveK |
COG3944 |
Capsular polysaccharide biosynthesis protein YveK [Cell wall/membrane/envelope biogenesis]; |
445-596 |
1.60e-21 |
|
Capsular polysaccharide biosynthesis protein YveK [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443144 [Multi-domain] Cd Length: 309 Bit Score: 95.90 E-value: 1.60e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 445 NARIVDRAVRPEVPVKPNRKLIVIAAGLLALMAGVGLALLLEMLNNTFKSTEEIEEQLNLPVLGILPLLKDKLRKDVAQM 524
Cdd:COG3944 149 NVTVLDPATVPASPVSPNPKLNLAIGLVLGLLLGVGLAFLRELLDTTIRSEEDIERLLGLLLGGAVPAARSARPLLLLLA 228
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 522173320 525 FGRGGETDRAFLEAIRTLRTGVVLSGLnkeqkVLLVTSSIPGEGKSSVAANLAQALGQMEKVLLIDADMRRP 596
Cdd:COG3944 229 DASPRAAAARRRRRNLLFALAAVDART-----VVVVSSSLSEGKSTTTAALALALAAAAAGVVLVLADLDRR 295
|
|
| FlhG |
COG0455 |
MinD-like ATPase FlhG/YlxH, activator of the FlhF-type GTPase [Cell cycle control, cell ... |
571-726 |
2.68e-20 |
|
MinD-like ATPase FlhG/YlxH, activator of the FlhF-type GTPase [Cell cycle control, cell division, chromosome partitioning, Cell motility];
Pssm-ID: 440223 [Multi-domain] Cd Length: 230 Bit Score: 90.33 E-value: 2.68e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 571 SVAANLAQALGQM-EKVLLIDADMRRPTAAKNFELPVgTPGLANLIAGIAKLEDCIYPL-DGVDLISAGTVPPNPLELLS 648
Cdd:COG0455 1 TVAVNLAAALARLgKRVLLVDADLGLANLDVLLGLEP-KATLADVLAGEADLEDAIVQGpGGLDVLPGGSGPAELAELDP 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 649 SKRFAETLEVLGSKYDHIIIDSPPmqAVSDALMLSALASS-VIYVVKAESTSVQLVRDGIGRL-LQNRAPVSGVVLNQVD 726
Cdd:COG0455 80 EERLIRVLEELERFYDVVLVDTGA--GISDSVLLFLAAADeVVVVTTPEPTSITDAYALLKLLrRRLGVRRAGVVVNRVR 157
|
|
| GNVR |
pfam13807 |
G-rich domain on putative tyrosine kinase; This domain is found between two families, Wzz, ... |
414-487 |
1.06e-17 |
|
G-rich domain on putative tyrosine kinase; This domain is found between two families, Wzz, pfam02706 and CbiA pfam01656. There is a highly conserved GNVR sequence motif which characterizes this domain. The function is not known.
Pssm-ID: 433492 [Multi-domain] Cd Length: 82 Bit Score: 78.41 E-value: 1.06e-17
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 522173320 414 LQREVDSNQALYNTFLNRLKETSATADLQSANARIVDRAVRPEVPVKPNRKLIVIAAGLLALMAGVGLALLLEM 487
Cdd:pfam13807 9 LTRDVEVNTEIYTQLLNSNQELEVVKAGTVGNVRIVDTAVVPPKPVKPKKALIVVLALLLGLMLGVGLVLLRRA 82
|
|
| ParA |
COG1192 |
ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein ... |
566-726 |
1.85e-17 |
|
ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ [Cell cycle control, cell division, chromosome partitioning, Cell motility];
Pssm-ID: 440805 [Multi-domain] Cd Length: 253 Bit Score: 82.60 E-value: 1.85e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 566 GEGKSSVAANLAQALGQME-KVLLIDADmrrP----TAAKNFELPVGTPGLANLIAGIAKLEDCIYP--LDGVDLIsagt 638
Cdd:COG1192 12 GVGKTTTAVNLAAALARRGkRVLLIDLD---PqgnlTSGLGLDPDDLDPTLYDLLLDDAPLEDAIVPteIPGLDLI---- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 639 vPPNP------LELLSSK----RFAETLEVLGSKYDHIIIDSPPMqavSDALMLSAL--ASSVIYVVKAESTSV----QL 702
Cdd:COG1192 85 -PANIdlagaeIELVSRPgrelRLKRALAPLADDYDYILIDCPPS---LGLLTLNALaaADSVLIPVQPEYLSLeglaQL 160
|
170 180
....*....|....*....|....*.
gi 522173320 703 VR--DGIGRLLQNRAPVSGVVLNQVD 726
Cdd:COG1192 161 LEtiEEVREDLNPKLEILGILLTMVD 186
|
|
| CpaE |
COG4963 |
Flp pilus assembly ATPase CpaE/TadZ, contains N-terminal REC/TadZ_N domain [Intracellular ... |
556-726 |
5.23e-15 |
|
Flp pilus assembly ATPase CpaE/TadZ, contains N-terminal REC/TadZ_N domain [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures];
Pssm-ID: 443989 [Multi-domain] Cd Length: 358 Bit Score: 77.08 E-value: 5.23e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 556 KVLLVTSSIPGEGKSSVAANLAQALGQM--EKVLLIDADMRRPTAAKNFELPvGTPGLANLIAGIAK-----LEDCIYPL 628
Cdd:COG4963 103 RVIAVVGAKGGVGATTLAVNLAWALAREsgRRVLLVDLDLQFGDVALYLDLE-PRRGLADALRNPDRldetlLDRALTRH 181
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 629 -DGVDLISAgTVPPNPLELLSSKRFAETLEVLGSKYDHIIIDSPPmqaVSDALMLSAL--ASSVIYVVKAESTSVQLVRD 705
Cdd:COG4963 182 sSGLSVLAA-PADLERAEEVSPEAVERLLDLLRRHFDYVVVDLPR---GLNPWTLAALeaADEVVLVTEPDLPSLRNAKR 257
|
170 180
....*....|....*....|...
gi 522173320 706 GIGRLLQNRAPVS--GVVLNQVD 726
Cdd:COG4963 258 LLDLLRELGLPDDkvRLVLNRVP 280
|
|
| CbiA |
pfam01656 |
CobQ/CobB/MinD/ParA nucleotide binding domain; This family consists of various cobyrinic acid ... |
566-737 |
1.43e-14 |
|
CobQ/CobB/MinD/ParA nucleotide binding domain; This family consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from S.typhimurium, and CobQ from R. capsulatus. These amidases catalyze amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria. The family also contains dethiobiotin synthetases as well as the plasmid partitioning proteins of the MinD/ParA family.
Pssm-ID: 426369 [Multi-domain] Cd Length: 228 Bit Score: 73.53 E-value: 1.43e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 566 GEGKSSVAANLAQALGQME-KVLLIDADMRRPTAAKNFELPVGTPGLANLIAGIAK---LEDCIYPLD----GVDLISAG 637
Cdd:pfam01656 9 GVGKTTLAANLARALARRGlRVLLIDLDPQSNNSSVEGLEGDIAPALQALAEGLKGrvnLDPILLKEKsdegGLDLIPGN 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 638 TVPPNPLELLSSKRFA----ETLEVLGSKYDHIIIDSPPmqAVSDaLMLSALASSvIYVVKAESTSVQLVRD--GIGRLL 711
Cdd:pfam01656 89 IDLEKFEKELLGPRKEerlrEALEALKEDYDYVIIDGAP--GLGE-LLRNALIAA-DYVIIPLEPEVILVEDakRLGGVI 164
|
170 180 190
....*....|....*....|....*....|....
gi 522173320 712 QN--------RAPVSGVVLNQVDIEKAKKNGYSH 737
Cdd:pfam01656 165 AAlvggyallGLKIIGVVLNKVDGDNHGKLLKEA 198
|
|
| MinD |
cd02036 |
septum site-determining protein MinD; Septum site-determining protein MinD is part of the ... |
556-733 |
2.33e-13 |
|
septum site-determining protein MinD; Septum site-determining protein MinD is part of the operon MinCDE that determines the site of the formation of a septum at mid-cell, an important part of bacterial cell division. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein.
Pssm-ID: 349756 [Multi-domain] Cd Length: 236 Bit Score: 70.31 E-value: 2.33e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 556 KVLLVTSSIPGEGKSSVAANLAQALGQM-EKVLLIDAD--MRrptaakNFELPVGTPG-----LANLIAGIAKLEDCIYP 627
Cdd:cd02036 1 RVIVITSGKGGVGKTTTTANLGVALAKLgKKVLLIDADigLR------NLDLILGLENrivytLVDVLEGECRLEQALIK 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 628 ---LDGVDLISAGtVPPNPLElLSSKRFAETLEVLGSKYDHIIIDSPpmqAVSDALMLSALASS--VIYVVKAESTSvql 702
Cdd:cd02036 75 dkrWENLYLLPAS-QTRDKDA-LTPEKLEELVKELKDSFDFILIDSP---AGIESGFINAIAPAdeAIIVTNPEISS--- 146
|
170 180 190
....*....|....*....|....*....|....
gi 522173320 703 VRDG--IGRLLQNRAPVS-GVVLNQVDIEKAKKN 733
Cdd:cd02036 147 VRDAdrVIGLLESKGIVNiGLIVNRYRPEMVKSG 180
|
|
| FlhG-like |
cd02038 |
MinD-like ATPase FlhG; FlhG is a member of the SIMIBI superfamily. FlhG (also known as YlxH) ... |
556-700 |
4.88e-13 |
|
MinD-like ATPase FlhG; FlhG is a member of the SIMIBI superfamily. FlhG (also known as YlxH) is a major determinant for a variety of flagellation patterns. It effects location and number of bacterial flagella during C-ring assembly.
Pssm-ID: 349758 [Multi-domain] Cd Length: 230 Bit Score: 69.14 E-value: 4.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 556 KVLLVTSSIPGEGKSSVAANLAQALGQM-EKVLLIDADMrrptaaknfelpvgtpGLANL---------------IAGIA 619
Cdd:cd02038 1 RIIAVTSGKGGVGKTNVSANLALALSKLgKRVLLLDADL----------------GLANLdillglapkktlgdvLKGRV 64
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 620 KLEDCI--YPlDGVDLISAGTVPPNPLELLSS--KRFAETLEVLGSKYDHIIIDSPPmQAVSDALMLSALASSVIYVVKA 695
Cdd:cd02038 65 SLEDIIveGP-EGLDIIPGGSGMEELANLDPEqkAKLIEELSSLESNYDYLLIDTGA-GISRNVLDFLLAADEVIVVTTP 142
|
....*
gi 522173320 696 ESTSV 700
Cdd:cd02038 143 EPTSI 147
|
|
| AAA_31 |
pfam13614 |
AAA domain; This family includes a wide variety of AAA domains including some that have lost ... |
566-713 |
1.56e-10 |
|
AAA domain; This family includes a wide variety of AAA domains including some that have lost essential nucleotide binding residues in the P-loop.
Pssm-ID: 433350 [Multi-domain] Cd Length: 177 Bit Score: 60.68 E-value: 1.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 566 GEGKSSVAANLAQALGQME-KVLLIDADMR-RPTAAKNFELPVGTPGLANLIAGIAKLEDCIYPLD---------GVDLI 634
Cdd:pfam13614 12 GVGKTTTSVNLAAALAKKGkKVLLIDLDPQgNATSGLGIDKNNVEKTIYELLIGECNIEEAIIKTVienldlipsNIDLA 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 635 SAgtvppnPLELLSSK----RFAETLEVLGSKYDHIIIDSPPMQAVsdaLMLSAL--ASSVIYVVKAESTSVQlvrdGIG 708
Cdd:pfam13614 92 GA------EIELIGIEnrenILKEALEPVKDNYDYIIIDCPPSLGL---LTINALtaSDSVLIPVQCEYYALE----GLS 158
|
....*
gi 522173320 709 RLLQN 713
Cdd:pfam13614 159 QLLNT 163
|
|
| Wzz |
pfam02706 |
Chain length determinant protein; This family includes proteins involved in lipopolysaccharide ... |
27-118 |
3.07e-10 |
|
Chain length determinant protein; This family includes proteins involved in lipopolysaccharide (lps) biosynthesis. This family comprises the whole length of chain length determinant protein (or wzz protein) that confers a modal distribution of chain length on the O-antigen component of lps. This region is also found as part of bacterial tyrosine kinases.
Pssm-ID: 460658 [Multi-domain] Cd Length: 90 Bit Score: 57.30 E-value: 3.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 27 DELDLLRLWQPIWRRKWSIATLMLVVMMLATLVALAMTPVYRAASTLMIEEKAAQVLSIQQVYGLDGnsSGYLQTQFELL 106
Cdd:pfam02706 1 DEIDLIELLGVLWKRKKLIILVTLLFTLLAAAYAFLATPKYTATAQILVPQKKGEAGSLLGSDLQAG--LQLASTEIEIL 78
|
90
....*....|..
gi 522173320 107 KSRELAERVVHE 118
Cdd:pfam02706 79 KSRDVLEKVIDE 90
|
|
| YveK |
COG3944 |
Capsular polysaccharide biosynthesis protein YveK [Cell wall/membrane/envelope biogenesis]; |
28-186 |
3.70e-10 |
|
Capsular polysaccharide biosynthesis protein YveK [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 443144 [Multi-domain] Cd Length: 309 Bit Score: 62.01 E-value: 3.70e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 28 ELDLLRLWQPIWRRKWSIATLMLVVMMLATLVALAMTPVYRAASTLMIEEKAAQvlSIQQVYGLDGNSSGYLQTQFELLK 107
Cdd:COG3944 1 EMDLREYLRILRRRWWLILLLTLLGALAALASSFLITPVYQASTTLLVSTSSGS--DASDLYQGIQTAQQLVNTYAELLK 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 108 SRELAERVVHELSLNTHPEFDPRQQSASLIDIRGLLDFNAwlpfTTPedvaevDPELAE------AQAFRAAVDTFMKRT 181
Cdd:COG3944 79 SPAVLEEVIDELGLDLSPEELAKKISVTSPPDTQVITITV----TDT------DPERAAdianavAEVFAEEVKELMKVD 148
|
....*
gi 522173320 182 TITPV 186
Cdd:COG3944 149 NVTVL 153
|
|
| CpaE-like |
cd03111 |
pilus assembly ATPase CpaE; This protein family consists of proteins similar to the cpaE ... |
556-726 |
6.98e-09 |
|
pilus assembly ATPase CpaE; This protein family consists of proteins similar to the cpaE protein of the Caulobacter pilus assembly and the orf4 protein of Actinobacillus pilus formation gene cluster. The function of these proteins are unkown. The Caulobacter pilus assembly contains 7 genes: pilA, cpaA, cpaB, cpaC, cpaD, cpaE and cpaF. These genes are clustered together on chromosome.
Pssm-ID: 349765 [Multi-domain] Cd Length: 235 Bit Score: 56.90 E-value: 6.98e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 556 KVLLVTSSIPGEGKSSVAANLAQALGQ--MEKVLLIDADMRRPTAAKNFELpVGTPGLANLIAGIAK-----LEDCIYPL 628
Cdd:cd03111 1 RVVAVVGAKGGVGASTLAVNLAQELAQraKDKVLLIDLDLPFGDLGLYLNL-RPDYDLADVIQNLDRldrtlLDSAVTRH 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 629 -DGVDLISAgtvpPNPLELLSSK---RFAETLEVLGSKYDHIIIDSPPmqaVSDALMLSAL--ASSVIYVVKAESTSVQL 702
Cdd:cd03111 80 sSGLSLLPA----PQELEDLEALgaeQVDKLLQVLRAFYDHIIVDLGH---FLDEVTLAVLeaADEILLVTQQDLPSLRN 152
|
170 180
....*....|....*....|....*..
gi 522173320 703 VR---DGIGRLLQNRAPVSgVVLNQVD 726
Cdd:cd03111 153 ARrllDSLRELEGSSDRLR-LVLNRYD 178
|
|
| WzzB |
COG3765 |
LPS O-antigen chain length determinant protein, WzzB/FepE family [Cell wall/membrane/envelope ... |
1-69 |
4.25e-06 |
|
LPS O-antigen chain length determinant protein, WzzB/FepE family [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442979 [Multi-domain] Cd Length: 364 Bit Score: 49.58 E-value: 4.25e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 522173320 1 MENQLIPQQPAFpdrlgerQPERIRDDELDLLRLWQPIWRRKWSIATLMLVVMMLATLVALAMTPVYRA 69
Cdd:COG3765 1 MSSEESKQLYPN-------QYPPSQDDEIDLFELLRTLWQGKLWIIGITLLFALLALVYAFLLPQKWTS 62
|
|
| ArsA |
cd02035 |
Arsenical pump-driving ATPase ArsA; ArsA ATPase functions as an efflux pump located on the ... |
566-725 |
5.35e-06 |
|
Arsenical pump-driving ATPase ArsA; ArsA ATPase functions as an efflux pump located on the inner membrane of the cell. This ATP-driven oxyanion pump catalyzes the extrusion of arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents. The pump is composed of two subunits, the catalytic ArsA subunit and the membrane subunit ArsB, which are encoded by arsA and arsB genes, respectively. Arsenic efflux in bacteria is catalyzed by either ArsB alone or by ArsAB complex. The ATP-coupled pump, however, is more efficient. ArsA is composed of two homologous halves, A1 and A2, connected by a short linker sequence.
Pssm-ID: 349755 [Multi-domain] Cd Length: 250 Bit Score: 48.66 E-value: 5.35e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 566 GEGKSSVAANLAQALGQM-EKVLLIDADmrrptAAKN----FELPVG----TPGLANL--------------IAGIAKLE 622
Cdd:cd02035 10 GVGKTTIAAATAVRLAEQgKRVLLVSTD-----PAHSlsdaFGQKLGgetpVKGAPNLwameidpeealeeyWEEVKELL 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 623 DCIYPLDGVDLISAG--TVPPNPLELLSSKRFAETLEvlGSKYDHIIIDSP-----------PMQAVsDALMLSALASSV 689
Cdd:cd02035 85 AQYLRLPGLDEVYAEelLSLPGMDEAAAFDELREYVE--SGEYDVIVFDTAptghtlrllslPLEQV-RELLRDPERTTF 161
|
170 180 190
....*....|....*....|....*....|....*.
gi 522173320 690 IYVVKAESTSVQLVRDGIGRLLQNRAPVSGVVLNQV 725
Cdd:cd02035 162 VLVTIPEKLSIYETERLWGELQQYGIPVDGVVVNQV 197
|
|
| ParAB_family |
cd02042 |
partition proteins ParAB family; ParA and ParB of Caulobacter crescentus belong to a conserved ... |
566-726 |
9.59e-06 |
|
partition proteins ParAB family; ParA and ParB of Caulobacter crescentus belong to a conserved family of bacterial proteins implicated in chromosome segregation. ParB binds to DNA sequences adjacent to the origin of replication and localizes to opposite cell poles shortly following the initiation of DNA replication. ParB regulates the ParA ATPase activity by promoting nucleotide exchange in a fashion reminiscent of the exchange factors of eukaryotic G proteins. ADP-bound ParA binds single-stranded DNA, whereas the ATP-bound form dissociates ParB from its DNA binding sites. Increasing the fraction of ParA-ADP in the cell inhibits cell division, suggesting that this simple nucleotide switch may regulate cytokinesis. ParA shares sequence similarity to a conserved and widespread family of ATPases which includes the repA protein of the repABC operon in Rhizobium etli symbiotic plasmid. This operon is involved in the plasmid replication and partition.
Pssm-ID: 349760 [Multi-domain] Cd Length: 130 Bit Score: 45.61 E-value: 9.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 566 GEGKSSVAANLAQALGQME-KVLLIDADMRRpTAAKNFelpvgtpglanliagiakledciypldgvdlisagtvppnpl 644
Cdd:cd02042 11 GVGKTTLAVNLAAALALRGkRVLLIDLDPQG-SLTSWL------------------------------------------ 47
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 645 ellsskrfaetlevlgskYDHIIIDSPPmqAVSdALMLSALASS--VIYVVKAESTSV----QLVR--DGIGRLLQNRAP 716
Cdd:cd02042 48 ------------------YDYILIDTPP--SLG-LLTRNALAAAdlVLIPVQPSPFDLdglaKLLDtlEELKKQLNPPLL 106
|
170
....*....|
gi 522173320 717 VSGVVLNQVD 726
Cdd:cd02042 107 ILGILLTRVD 116
|
|
| SIMIBI |
cd01983 |
SIMIBI (signal recognition particle, MinD and BioD)-class NTPases; SIMIBI (after signal ... |
556-592 |
3.26e-05 |
|
SIMIBI (signal recognition particle, MinD and BioD)-class NTPases; SIMIBI (after signal recognition particle, MinD, and BioD), consists of signal recognition particle (SRP) GTPases, the assemblage of MinD-like ATPases, which are involved in protein localization, chromosome partitioning, and membrane transport, and a group of metabolic enzymes with kinase or related phosphate transferase activity. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Pssm-ID: 349751 [Multi-domain] Cd Length: 107 Bit Score: 43.57 E-value: 3.26e-05
10 20 30
....*....|....*....|....*....|....*...
gi 522173320 556 KVLLVTSSIPGEGKSSVAANLAQALGQM-EKVLLIDAD 592
Cdd:cd01983 1 RVIAVTGGKGGVGKTTLAAALAVALAAKgYKVLLIDLD 38
|
|
| Mrp_NBP35 |
cd02037 |
Mrp/NBP35 ATP-binding protein family; Mrp/NBP35 ATP-binding family protein are typically ... |
556-723 |
3.79e-05 |
|
Mrp/NBP35 ATP-binding protein family; Mrp/NBP35 ATP-binding family protein are typically iron-sulfur (FeS) cluster scaffolds that function to assemble nascent FeS clusters for transfer to FeS-requiring enzymes. Members include the eukaryotic nucleotide-binding protein 1 (NUBP1) which is a component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery and the archael [NiFe] hydrogenase maturation protein HypB which is required for nickel insertion into [NiFe] hydrogenase.
Pssm-ID: 349757 [Multi-domain] Cd Length: 213 Bit Score: 45.57 E-value: 3.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 556 KVLLVTSSIPGEGKSSVAANLAQALGQME-KVLLIDADMRRPTAAKNFelpvgtpGLANliagiAKLEDC---IYPL--D 629
Cdd:cd02037 1 HIIAVLSGKGGVGKSTVAVNLALALAKKGyKVGLLDADIYGPSIPRLL-------GVEG-----KPLHQSeegIVPVevG 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 630 GVDLISAG-TVPPN-------PL------ELLSSKRFAETlevlgskyDHIIIDSPPmqAVSD---ALMLSALASSVIYV 692
Cdd:cd02037 69 GIKVMSIGfLLPEDdaviwrgPMksgaikQFLKDVDWGEL--------DYLIIDLPP--GTGDehlSLVQLIPIDGAVVV 138
|
170 180 190
....*....|....*....|....*....|.
gi 522173320 693 VKAESTSVQLVRDGIGRLLQNRAPVSGVVLN 723
Cdd:cd02037 139 TTPQEVSLIDVRKAIDMCKKLNIPVLGIVEN 169
|
|
| WzzB |
COG3765 |
LPS O-antigen chain length determinant protein, WzzB/FepE family [Cell wall/membrane/envelope ... |
355-484 |
6.04e-05 |
|
LPS O-antigen chain length determinant protein, WzzB/FepE family [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442979 [Multi-domain] Cd Length: 364 Bit Score: 46.12 E-value: 6.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 355 RSELNTATASLKSQVEQVVASIERAYQ---------LAVAN-------------EDALQS----SFELNKDEIQA---IT 405
Cdd:COG3765 200 QGAIAARLQSLKAQIKRLEEVAKAQRQrrierlkyaLKIAQaagikkpvysngqTPAVKLdpsyLFLLGTDALQAeleIL 279
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 522173320 406 RKEFKLRELQREVDSNQALYNTfLNRLKEtsATADLQSAnaRIVDRAVRPEVPVKPNRKLIVIAAGLLALMAGVGLALL 484
Cdd:COG3765 280 KARGDDYPLNADLYQLQAQLAQ-LNALPI--DDVGFQPF--RYLRTPEEPVKKDKPKRALILVLGALLGGMLGVGVVLI 353
|
|
| ParA |
pfam10609 |
NUBPL iron-transfer P-loop NTPase; This family contains ATPases involved in plasmid ... |
555-611 |
9.16e-05 |
|
NUBPL iron-transfer P-loop NTPase; This family contains ATPases involved in plasmid partitioning. It also contains the cytosolic Fe-S cluster assembling factor NBP35 which is required for biogenesis and export of both ribosomal subunits.
Pssm-ID: 431392 [Multi-domain] Cd Length: 246 Bit Score: 44.75 E-value: 9.16e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 522173320 555 QKVLLVTSSIPGEGKSSVAANLAQALGQME-KVLLIDAD--------M-----RRPTAAKNFELPVGTPGL 611
Cdd:pfam10609 3 KHVIAVASGKGGVGKSTVAVNLALALARLGyKVGLLDADiygpsiprMlglegERPEQSDGGIIPVEAHGI 73
|
|
| PRK13869 |
PRK13869 |
plasmid-partitioning protein RepA; Provisional |
556-693 |
2.39e-04 |
|
plasmid-partitioning protein RepA; Provisional
Pssm-ID: 139929 [Multi-domain] Cd Length: 405 Bit Score: 44.28 E-value: 2.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 556 KVLLVTSSIPGEGKSSVAANLAQALG-QMEKVLLIDADMRRPTAAKNFELPVGTPGlAN--LIAGIA------KLEDCIY 626
Cdd:PRK13869 122 QVIAVTNFKGGSGKTTTSAHLAQYLAlQGYRVLAVDLDPQASLSALLGVLPETDVG-ANetLYAAIRyddtrrPLRDVIR 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 627 P--LDGVDLIsagtvpPNPLEL----------LSSK---------RFAETLEVLGSKYDHIIIDSPPMQAVsdaLMLSAL 685
Cdd:PRK13869 201 PtyFDGLHLV------PGNLELmefehttpkaLSDKgtrdglfftRVAQAFDEVADDYDVVVIDCPPQLGF---LTLSGL 271
|
....*...
gi 522173320 686 ASSVIYVV 693
Cdd:PRK13869 272 CAATSMVI 279
|
|
| CooC |
COG3640 |
CO dehydrogenase nickel-insertion accessory protein CooC1 [Posttranslational modification, ... |
566-675 |
3.54e-03 |
|
CO dehydrogenase nickel-insertion accessory protein CooC1 [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 442857 [Multi-domain] Cd Length: 249 Bit Score: 39.76 E-value: 3.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 566 GEGKSSVAANLAQALGQM-EKVLLIDADM---------------RRPTAAKNFEL---PVGTPGLANLIAGI---AKLED 623
Cdd:COG3640 10 GVGKTTLSALLARYLAEKgKPVLAVDADPnanlaealgleveadLIKPLGEMRELikeRTGAPGGGMFKLNPkvdDIPEE 89
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 522173320 624 CIYPLDGVDLISAGTV---------PPNPLellsSKRFAETLEVlgSKYDHIIIDsppMQA 675
Cdd:COG3640 90 YLVEGDGVDLLVMGTIeeggsgcycPENAL----LRALLNHLVL--GNYEYVVVD---MEA 141
|
|
| PRK11670 |
PRK11670 |
iron-sulfur cluster carrier protein ApbC; |
539-597 |
3.59e-03 |
|
iron-sulfur cluster carrier protein ApbC;
Pssm-ID: 183270 [Multi-domain] Cd Length: 369 Bit Score: 40.41 E-value: 3.59e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 539 IRTLRTGVVLSGLNKEQKVLLVTSSIPGEGKSSVAANLAQAL-GQMEKVLLIDADMRRPT 597
Cdd:PRK11670 91 IATLKRVNNQPGVNGVKNIIAVSSGKGGVGKSSTAVNLALALaAEGAKVGILDADIYGPS 150
|
|
| KpsE |
COG3524 |
Capsule polysaccharide export protein KpsE/RkpR [Cell wall/membrane/envelope biogenesis]; |
39-485 |
9.40e-03 |
|
Capsule polysaccharide export protein KpsE/RkpR [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442746 [Multi-domain] Cd Length: 370 Bit Score: 39.06 E-value: 9.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 39 WRRKWSIATLMLVVMmLATLVALA-----MTPVYRAASTLMI--EEKAAQVLSIQQVYGLDGNSSG-----YLQtqfELL 106
Cdd:COG3524 7 PRRKLLLLLFLLFVL-LPTLLAALyygliASDQYVSEARFVVrsAEGQSGSDGLGGLLGGTGFSSSsqdsyIVQ---DYL 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 107 KSRELAERVVHELSLNTH---PEFDPRQQsaslidirglLDFNAwlpftTPEDvaevdpelaeaqafraAVDTFMKRTTI 183
Cdd:COG3524 83 RSRDAVERLDAELDLRAHysrPGIDPLSR----------LDPDA-----SIED----------------LYKYYRRRVKV 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 184 TPVPKTQLVKVQIEmadastaaraanalarTYiDSQMEAKL---------EMTNN--------ATRWINERLETLKVSLQ 246
Cdd:COG3524 132 EYDSTSGIITLEVR----------------AF-DPEDAQAIaeallaeseELVNQlseraredAVRFAEEEVERAEERLR 194
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 247 ESERQLQAFRDQENLVDLQGgvttvsagelsrtsdrlvdtrrdrdAAESQYRQVAELKGggwqrltaapavmsnplvqqf 326
Cdd:COG3524 195 DAREALLAFRNRNGILDPEA-------------------------TAEALLQLIATLEG--------------------- 228
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 522173320 327 kaQEAQALSKVQELSNRYGPKHPSMIAARSELntatASLKSQVEQvvasiERAyQLAVANEDALQSSfelnkdeiqaiTR 406
Cdd:COG3524 229 --QLAELEAELAALRSYLSPNSPQVRQLRRRI----AALEKQIAA-----ERA-RLTGASGGDSLAS-----------LL 285
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 522173320 407 KEFKLRELQREVDsnQALYNTFLNRLKETSATADLQSANARIVDRAVRPEVPVKPNRKLIVIAAGLLALMAGVGLALLL 485
Cdd:COG3524 286 AEYERLELEREFA--EKAYTSALAALEQARIEAARQQRYLAVIVQPTLPDEALYPRRLYNILLVFLILLLLYGIGSLLV 362
|
|
| |
