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Conserved domains on  [gi|523688866|ref|WP_020807929|]
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MULTISPECIES: AbiH family protein [Lactobacillus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AbiH super family cl16749
Bacteriophage abortive infection AbiH; This family of proteins confers resistance to ...
 23-103 1.80e-03

Bacteriophage abortive infection AbiH; This family of proteins confers resistance to bacteriophage.


The actual alignment was detected with superfamily member pfam14253:

Pssm-ID: 433812  Cd Length: 248  Bit Score: 37.38  E-value: 1.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523688866   23 NTDIIHPHGQESIPRSLLFGSNCERFKDNKDLDRFNKEYWARYDVKYSTLLK-------ETELYIIYGSSIGESDSWWWK 95
Cdd:pfam14253 158 PDNILHIHGKADITDDLVLGHGNDPDEAYNIIEKYYNRTFKNTDEIIENNEDffksltnEIEKIYVYGHSLGDVDKPYLE 237


                  ....*...
gi 523688866   96 KICESLKN 103
Cdd:pfam14253 238 RIANSIKT 245
 
Name Accession Description Interval E-value
AbiH pfam14253
Bacteriophage abortive infection AbiH; This family of proteins confers resistance to ...
 23-103 1.80e-03

Bacteriophage abortive infection AbiH; This family of proteins confers resistance to bacteriophage.


Pssm-ID: 433812  Cd Length: 248  Bit Score: 37.38  E-value: 1.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523688866   23 NTDIIHPHGQESIPRSLLFGSNCERFKDNKDLDRFNKEYWARYDVKYSTLLK-------ETELYIIYGSSIGESDSWWWK 95
Cdd:pfam14253 158 PDNILHIHGKADITDDLVLGHGNDPDEAYNIIEKYYNRTFKNTDEIIENNEDffksltnEIEKIYVYGHSLGDVDKPYLE 237


                  ....*...
gi 523688866   96 KICESLKN 103
Cdd:pfam14253 238 RIANSIKT 245
 
Name Accession Description Interval E-value
AbiH pfam14253
Bacteriophage abortive infection AbiH; This family of proteins confers resistance to ...
 23-103 1.80e-03

Bacteriophage abortive infection AbiH; This family of proteins confers resistance to bacteriophage.


Pssm-ID: 433812  Cd Length: 248  Bit Score: 37.38  E-value: 1.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 523688866   23 NTDIIHPHGQESIPRSLLFGSNCERFKDNKDLDRFNKEYWARYDVKYSTLLK-------ETELYIIYGSSIGESDSWWWK 95
Cdd:pfam14253 158 PDNILHIHGKADITDDLVLGHGNDPDEAYNIIEKYYNRTFKNTDEIIENNEDffksltnEIEKIYVYGHSLGDVDKPYLE 237


                  ....*...
gi 523688866   96 KICESLKN 103
Cdd:pfam14253 238 RIANSIKT 245
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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