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Conserved domains on  [gi|523700450|ref|WP_020818670|]
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MULTISPECIES: DUF6356 family protein [Sphingobium]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF6356 pfam19883
Family of unknown function (DUF6356); This family of proteins is functionally uncharacterized. ...
 3-66 3.95e-30

Family of unknown function (DUF6356); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 71 and 88 amino acids in length. There are two conserved sequence motifs: KTGS and RMV.


:

Pssm-ID: 437715  Cd Length: 64  Bit Score: 101.04  E-value: 3.95e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 523700450   3 DRLFLKHPRDVHESYGGHFEVATRFGFLMVRAGLACMVHGLVPAFFTRTGSATVKRLYDEMRQR 66
Cdd:pfam19883  1 KRLFTDHPASVGESYFEHMGFALRFGGRMLLAGLACLVHALLPFLFEKTGSRTIRRLHDRMVRR 64
 
Name Accession Description Interval E-value
DUF6356 pfam19883
Family of unknown function (DUF6356); This family of proteins is functionally uncharacterized. ...
 3-66 3.95e-30

Family of unknown function (DUF6356); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 71 and 88 amino acids in length. There are two conserved sequence motifs: KTGS and RMV.


Pssm-ID: 437715  Cd Length: 64  Bit Score: 101.04  E-value: 3.95e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 523700450   3 DRLFLKHPRDVHESYGGHFEVATRFGFLMVRAGLACMVHGLVPAFFTRTGSATVKRLYDEMRQR 66
Cdd:pfam19883  1 KRLFTDHPASVGESYFEHMGFALRFGGRMLLAGLACLVHALLPFLFEKTGSRTIRRLHDRMVRR 64
 
Name Accession Description Interval E-value
DUF6356 pfam19883
Family of unknown function (DUF6356); This family of proteins is functionally uncharacterized. ...
 3-66 3.95e-30

Family of unknown function (DUF6356); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria. Proteins in this family are typically between 71 and 88 amino acids in length. There are two conserved sequence motifs: KTGS and RMV.


Pssm-ID: 437715  Cd Length: 64  Bit Score: 101.04  E-value: 3.95e-30
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 523700450   3 DRLFLKHPRDVHESYGGHFEVATRFGFLMVRAGLACMVHGLVPAFFTRTGSATVKRLYDEMRQR 66
Cdd:pfam19883  1 KRLFTDHPASVGESYFEHMGFALRFGGRMLLAGLACLVHALLPFLFEKTGSRTIRRLHDRMVRR 64
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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