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Conserved domains on  [gi|544778605|ref|WP_021202527|]
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alpha/beta hydrolase [Stenotrophomonas hibiscicola]

Protein Classification

alpha/beta hydrolase( domain architecture ID 12118179)

alpha/beta hydrolase family protein catalyzes the hydrolysis of substrates with different chemical composition or physicochemical properties using a nucleophile-His-acid catalytic triad

CATH:  3.40.50.1820
EC:  3.-.-.-
Gene Ontology:  GO:0016787

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Abhydrolase_6 pfam12697
Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse ...
7-221 1.03e-17

Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse specificity.


:

Pssm-ID: 463673 [Multi-domain]  Cd Length: 211  Bit Score: 78.28  E-value: 1.03e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605    7 ILLVHGFWGGAAHWAKVILELHRN------GHDRVQAVELPLTSLADDAGRTQKMIRqiDGPVLLVGHSYGGAVISQAGN 80
Cdd:pfam12697   1 VVLVHGAGLSAAPLAALLAAGVAVlapdlpGHGSSSPPPLDLADLADLAALLDELGA--ARPVVLVGHSLGGAVALAAAA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605   81 EANVKGlVYIAAFAPDAGESPGgitqqhLPEAAPNLAPDSDGYLWLRADKFHESFCQDLSEDEGRVMAVTQKAPLASTFg 160
Cdd:pfam12697  79 AALVVG-VLVAPLAAPPGLLAA------LLALLARLGAALAAPAWLAAESLARGFLDDLPADAEWAAALARLAALLAAL- 150
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 544778605  161 DTVSDPAWKDRPSWYQL-SRHDRMIAPENQKAMAARMQPKRLLELDASHASLaSQPKEVTAL 221
Cdd:pfam12697 151 ALLPLAAWRDLPVPVLVlAEEDRLVPELAQRLLAALAGARLVVLPGAGHLPL-DDPEEVAEA 211
 
Name Accession Description Interval E-value
Abhydrolase_6 pfam12697
Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse ...
7-221 1.03e-17

Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse specificity.


Pssm-ID: 463673 [Multi-domain]  Cd Length: 211  Bit Score: 78.28  E-value: 1.03e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605    7 ILLVHGFWGGAAHWAKVILELHRN------GHDRVQAVELPLTSLADDAGRTQKMIRqiDGPVLLVGHSYGGAVISQAGN 80
Cdd:pfam12697   1 VVLVHGAGLSAAPLAALLAAGVAVlapdlpGHGSSSPPPLDLADLADLAALLDELGA--ARPVVLVGHSLGGAVALAAAA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605   81 EANVKGlVYIAAFAPDAGESPGgitqqhLPEAAPNLAPDSDGYLWLRADKFHESFCQDLSEDEGRVMAVTQKAPLASTFg 160
Cdd:pfam12697  79 AALVVG-VLVAPLAAPPGLLAA------LLALLARLGAALAAPAWLAAESLARGFLDDLPADAEWAAALARLAALLAAL- 150
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 544778605  161 DTVSDPAWKDRPSWYQL-SRHDRMIAPENQKAMAARMQPKRLLELDASHASLaSQPKEVTAL 221
Cdd:pfam12697 151 ALLPLAAWRDLPVPVLVlAEEDRLVPELAQRLLAALAGARLVVLPGAGHLPL-DDPEEVAEA 211
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
5-228 1.12e-14

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 70.42  E-value: 1.12e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605   5 PTILLVHGFWGGAAHWAKVILELHRngHDRVQAVELP---LTSLADDAGRTQKMIRQID--------GPVLLVGHSYGGA 73
Cdd:COG0596   24 PPVVLLHGLPGSSYEWRPLIPALAA--GYRVIAPDLRghgRSDKPAGGYTLDDLADDLAalldalglERVVLVGHSMGGM 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605  74 VISQAGNE--ANVKGLVYIAAfapdagespggiTQQHLPEAAPNLAPDSDGYLWLradkFHESFCQDLSEDEGRVmavtq 151
Cdd:COG0596  102 VALELAARhpERVAGLVLVDE------------VLAALAEPLRRPGLAPEALAAL----LRALARTDLRERLARI----- 160
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 544778605 152 kaplastfgdtvsdpawkDRPSWYQLSRHDRMIAPENQKAMAARMQPKRLLEL-DASHASLASQPKEVTALILEACAA 228
Cdd:COG0596  161 ------------------TVPTLVIWGEKDPIVPPALARRLAELLPNAELVVLpGAGHFPPLEQPEAFAAALRDFLAR 220
PLN02211 PLN02211
methyl indole-3-acetate methyltransferase
5-230 5.41e-10

methyl indole-3-acetate methyltransferase


Pssm-ID: 215128  Cd Length: 273  Bit Score: 57.98  E-value: 5.41e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605   5 PTILLVHGFWGGAAHWAKVILELHRNGHdRVQAVELPLTSLADDAGRTQKMIRQIDGP-------------VLLVGHSYG 71
Cdd:PLN02211  19 PHFVLIHGISGGSWCWYKIRCLMENSGY-KVTCIDLKSAGIDQSDADSVTTFDEYNKPlidflsslpenekVILVGHSAG 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605  72 GAVISQAGNE--ANVKGLVYIAAFAPDAGESpggiTQQHLPEAAPNLAPDSDGY---LWLRADK----------FHESFC 136
Cdd:PLN02211  98 GLSVTQAIHRfpKKICLAVYVAATMLKLGFQ----TDEDMKDGVPDLSEFGDVYelgFGLGPDQpptsaiikkeFRRKIL 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605 137 QDLSEDEGRVMAVTQKAP---LASTFGDTVSDPAWKDR-PSWYQLSRHDRMIAPENQKAMAARMQPKRLLELDASHASLA 212
Cdd:PLN02211 174 YQMSPQEDSTLAAMLLRPgpiLALRSARFEEETGDIDKvPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELESDHSPFF 253
                        250
                 ....*....|....*...
gi 544778605 213 SQPKEVTALILEACAAIG 230
Cdd:PLN02211 254 STPFLLFGLLIKAAASVG 271
 
Name Accession Description Interval E-value
Abhydrolase_6 pfam12697
Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse ...
7-221 1.03e-17

Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse specificity.


Pssm-ID: 463673 [Multi-domain]  Cd Length: 211  Bit Score: 78.28  E-value: 1.03e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605    7 ILLVHGFWGGAAHWAKVILELHRN------GHDRVQAVELPLTSLADDAGRTQKMIRqiDGPVLLVGHSYGGAVISQAGN 80
Cdd:pfam12697   1 VVLVHGAGLSAAPLAALLAAGVAVlapdlpGHGSSSPPPLDLADLADLAALLDELGA--ARPVVLVGHSLGGAVALAAAA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605   81 EANVKGlVYIAAFAPDAGESPGgitqqhLPEAAPNLAPDSDGYLWLRADKFHESFCQDLSEDEGRVMAVTQKAPLASTFg 160
Cdd:pfam12697  79 AALVVG-VLVAPLAAPPGLLAA------LLALLARLGAALAAPAWLAAESLARGFLDDLPADAEWAAALARLAALLAAL- 150
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 544778605  161 DTVSDPAWKDRPSWYQL-SRHDRMIAPENQKAMAARMQPKRLLELDASHASLaSQPKEVTAL 221
Cdd:pfam12697 151 ALLPLAAWRDLPVPVLVlAEEDRLVPELAQRLLAALAGARLVVLPGAGHLPL-DDPEEVAEA 211
MenH COG0596
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ...
5-228 1.12e-14

2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis


Pssm-ID: 440361 [Multi-domain]  Cd Length: 221  Bit Score: 70.42  E-value: 1.12e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605   5 PTILLVHGFWGGAAHWAKVILELHRngHDRVQAVELP---LTSLADDAGRTQKMIRQID--------GPVLLVGHSYGGA 73
Cdd:COG0596   24 PPVVLLHGLPGSSYEWRPLIPALAA--GYRVIAPDLRghgRSDKPAGGYTLDDLADDLAalldalglERVVLVGHSMGGM 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605  74 VISQAGNE--ANVKGLVYIAAfapdagespggiTQQHLPEAAPNLAPDSDGYLWLradkFHESFCQDLSEDEGRVmavtq 151
Cdd:COG0596  102 VALELAARhpERVAGLVLVDE------------VLAALAEPLRRPGLAPEALAAL----LRALARTDLRERLARI----- 160
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 544778605 152 kaplastfgdtvsdpawkDRPSWYQLSRHDRMIAPENQKAMAARMQPKRLLEL-DASHASLASQPKEVTALILEACAA 228
Cdd:COG0596  161 ------------------TVPTLVIWGEKDPIVPPALARRLAELLPNAELVVLpGAGHFPPLEQPEAFAAALRDFLAR 220
PLN02211 PLN02211
methyl indole-3-acetate methyltransferase
5-230 5.41e-10

methyl indole-3-acetate methyltransferase


Pssm-ID: 215128  Cd Length: 273  Bit Score: 57.98  E-value: 5.41e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605   5 PTILLVHGFWGGAAHWAKVILELHRNGHdRVQAVELPLTSLADDAGRTQKMIRQIDGP-------------VLLVGHSYG 71
Cdd:PLN02211  19 PHFVLIHGISGGSWCWYKIRCLMENSGY-KVTCIDLKSAGIDQSDADSVTTFDEYNKPlidflsslpenekVILVGHSAG 97
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605  72 GAVISQAGNE--ANVKGLVYIAAFAPDAGESpggiTQQHLPEAAPNLAPDSDGY---LWLRADK----------FHESFC 136
Cdd:PLN02211  98 GLSVTQAIHRfpKKICLAVYVAATMLKLGFQ----TDEDMKDGVPDLSEFGDVYelgFGLGPDQpptsaiikkeFRRKIL 173
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605 137 QDLSEDEGRVMAVTQKAP---LASTFGDTVSDPAWKDR-PSWYQLSRHDRMIAPENQKAMAARMQPKRLLELDASHASLA 212
Cdd:PLN02211 174 YQMSPQEDSTLAAMLLRPgpiLALRSARFEEETGDIDKvPRVYIKTLHDHVVKPEQQEAMIKRWPPSQVYELESDHSPFF 253
                        250
                 ....*....|....*...
gi 544778605 213 SQPKEVTALILEACAAIG 230
Cdd:PLN02211 254 STPFLLFGLLIKAAASVG 271
EstA COG1075
Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and ...
7-92 1.98e-09

Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and metabolism];


Pssm-ID: 440693 [Multi-domain]  Cd Length: 106  Bit Score: 53.29  E-value: 1.98e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605   7 ILLVHGFWGGAAHWAKVILELHRNGHdRVQAVELPLT--SLADDAGRTQKMIRQI-----DGPVLLVGHSYGG----AVI 75
Cdd:COG1075    8 VVLVHGLGGSAASWAPLAPRLRAAGY-PVYALNYPSTngSIEDSAEQLAAFVDAVlaatgAEKVDLVGHSMGGlvarYYL 86
                         90
                 ....*....|....*..
gi 544778605  76 SQAGNEANVKGLVYIAA 92
Cdd:COG1075   87 KRLGGAAKVARVVTLGT 103
PldB COG2267
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
5-116 1.04e-08

Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];


Pssm-ID: 441868 [Multi-domain]  Cd Length: 221  Bit Score: 53.47  E-value: 1.04e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605   5 PTILLVHGFWGGAAHWAKVILELHRNGHDrVQAVELP--------------LTSLADDAGRTQKMIRQI-DGPVLLVGHS 69
Cdd:COG2267   29 GTVVLVHGLGEHSGRYAELAEALAAAGYA-VLAFDLRghgrsdgprghvdsFDDYVDDLRAALDALRARpGLPVVLLGHS 107
                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|..
gi 544778605  70 YGGAVISQ--AGNEANVKGLVYIA---AFAPDAGESPGGITQQHLPEAAPNL 116
Cdd:COG2267  108 MGGLIALLyaARYPDRVAGLVLLApayRADPLLGPSARWLRALRLAEALARI 159
Abhydrolase_1 pfam00561
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
5-97 9.16e-05

alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.


Pssm-ID: 395444 [Multi-domain]  Cd Length: 245  Bit Score: 42.49  E-value: 9.16e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605    5 PTILLVHGFWGGAAHWAKVILELHRNGHdRVQAVELP-----LTSLADDAGRTQKMIRQID--------GPVLLVGHSYG 71
Cdd:pfam00561   1 PPVLLLHGLPGSSDLWRKLAPALARDGF-RVIALDLRgfgksSRPKAQDDYRTDDLAEDLEyilealglEKVNLVGHSMG 79
                          90       100
                  ....*....|....*....|....*...
gi 544778605   72 GAVISQAG--NEANVKGLVYIAAFAPDA 97
Cdd:pfam00561  80 GLIALAYAakYPDRVKALVLLGALDPPH 107
Abhydrolase_5 pfam12695
Alpha/beta hydrolase family; This family contains a diverse range of alpha/beta hydrolase ...
13-99 2.36e-04

Alpha/beta hydrolase family; This family contains a diverse range of alpha/beta hydrolase enzymes.


Pssm-ID: 315383 [Multi-domain]  Cd Length: 164  Bit Score: 40.51  E-value: 2.36e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605   13 FWGGA----AHWAKVILELHRNGHDrVQAVELPLTSLADDAGRTQKMIRQIDGPVLLV--GHSYGGAVISQ-AGNEANVK 85
Cdd:pfam12695   4 FYPGAkvepLSYAPLANKLAKSGYL-VVLVKMPLNLAVLGPNRALSIIKAHPKIQKWVvgGHSLGGVMASRfAADNELIK 82
                          90
                  ....*....|....
gi 544778605   86 GLVYIAAFaPDAGE 99
Cdd:pfam12695  83 GVVFLASY-PDKDS 95
YvaK COG1647
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];
3-224 3.60e-04

Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];


Pssm-ID: 441253 [Multi-domain]  Cd Length: 246  Bit Score: 40.70  E-value: 3.60e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605   3 TTPTILLVHGFWGGAAHWAKVILELHRNGHdrvqAVELPL-----TSLADDAGRT-QKMIRQID----------GPVLLV 66
Cdd:COG1647   14 GRKGVLLLHGFTGSPAEMRPLAEALAKAGY----TVYAPRlpghgTSPEDLLKTTwEDWLEDVEeayeilkagyDKVIVI 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605  67 GHSYGGAVISQ-AGNEANVKGLVYIAAFApdagespggitqqHLPEAAPNLAPdsdgyLWLRADKFHESFCQDLsEDEGR 145
Cdd:COG1647   90 GLSMGGLLALLlAARYPDVAGLVLLSPAL-------------KIDDPSAPLLP-----LLKYLARSLRGIGSDI-EDPEV 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605 146 VMAVTQKAPLASTFG-DTVSDPAWKDRPSWYQ-----LSRHDRMIAPENQKAMAARM--QPKRLLELDASH--ASLASQP 215
Cdd:COG1647  151 AEYAYDRTPLRALAElQRLIREVRRDLPKITAptliiQSRKDEVVPPESARYIYERLgsPDKELVWLEDSGhvITLDKDR 230

                 ....*....
gi 544778605 216 KEVTALILE 224
Cdd:COG1647  231 EEVAEEILD 239
PRK14875 PRK14875
acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
4-91 1.49e-03

acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional


Pssm-ID: 184875 [Multi-domain]  Cd Length: 371  Bit Score: 39.16  E-value: 1.49e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605   4 TPTILLVHGFWGGAAHWAKVILELHRngHDRVQAVELP---LTSLADDAGRTQKM----IRQID----GPVLLVGHSYGG 72
Cdd:PRK14875 131 GTPVVLIHGFGGDLNNWLFNHAALAA--GRPVIALDLPghgASSKAVGAGSLDELaaavLAFLDalgiERAHLVGHSMGG 208
                         90       100
                 ....*....|....*....|.
gi 544778605  73 AVISQAGNEAN--VKGLVYIA 91
Cdd:PRK14875 209 AVALRLAARAPqrVASLTLIA 229
Ser_hydrolase pfam06821
Serine hydrolase; Members of this family have serine hydrolase activity. They contain a ...
7-124 1.53e-03

Serine hydrolase; Members of this family have serine hydrolase activity. They contain a conserved serine hydrolase motif, GXSXG/A, where the serine is a putative nucleophile. This family has an alpha-beta hydrolase fold. Eukaryotic members of this family have a conserved LXCXE motif, which binds to retinoblastomas. This motif is absent from prokaryotic members of this family.


Pssm-ID: 399658 [Multi-domain]  Cd Length: 171  Bit Score: 38.08  E-value: 1.53e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605    7 ILLVHGFWG-GAAHWaKVILELHRNGHDRVQAVELPLTSLADDAGRTQKMIRQIDGPVLLVGHSYGGAVIS---QAGNEA 82
Cdd:pfam06821   1 LLIVPGWGGsGPGHW-QSHWERRLPAARRVEQDDWLQPVLDDWVAALSRAVAALPGPVILVAHSLGCLAVAhwaALQLRA 79
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 544778605   83 NVKGLVYIAAFAPDAGESP-------GGITQQHLPEAAPNLAPDSDGYL 124
Cdd:pfam06821  80 KVAGALLVAPADVEERPPRpaalanfAPIPRDPLPFPSLVVASRNDPYC 128
YdeN COG3545
Predicted esterase of the alpha/beta hydrolase fold [General function prediction only];
8-118 4.51e-03

Predicted esterase of the alpha/beta hydrolase fold [General function prediction only];


Pssm-ID: 442766 [Multi-domain]  Cd Length: 170  Bit Score: 36.75  E-value: 4.51e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544778605   8 LLVHGFWG-GAAHWAKVILELHRNghdrVQAVELPLT---SLADDAGRTQKMIRQIDGPVLLVGHSYGGAVISQAGNEAN 83
Cdd:COG3545    1 LIVPGLGGsGPDHWQSWWERELPT----VRRVEQPDWdrpDLDDWLAALDAAVAAADGPVVLVAHSLGCLAVAHWAARLP 76
                         90       100       110
                 ....*....|....*....|....*....|....*..
gi 544778605  84 --VKGLVYIAAFAPDAGEspggitqqHLPEAAPNLAP 118
Cdd:COG3545   77 rkVAGALLVAPPDPERPG--------FLPELDAGFAP 105
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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