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Conserved domains on  [gi|544825393|ref|WP_021241392|]
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MULTISPECIES: drug/metabolite exporter YedA [Enterobacter]

Protein Classification

EamA family transporter( domain architecture ID 11485295)

EamA family transporter is an inner membrane protein involved in the transport of one or more of a variety of substrates such as amino acids, drugs, metabolites, and sugar phosphates, among others; similar to Escherichia coli inner membrane transporter YedA; belongs to the DMT (drug/metabolite transporter) superfamily

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PRK11272 PRK11272
putative DMT superfamily transporter inner membrane protein; Provisional
1-292 5.48e-162

putative DMT superfamily transporter inner membrane protein; Provisional


:

Pssm-ID: 183067 [Multi-domain]  Cd Length: 292  Bit Score: 452.51  E-value: 5.48e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393   1 MRFRQLLPLIGALFSLYIIWGSTYFVIRIGVESWPPLMMAGIRFLSAGILLLAFLMLRGHKLPPLRPMLNAALIGLLLLA 80
Cdd:PRK11272   1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  81 VGNGFVTIAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIRTRKLEWLGIGIGLAGIVLLNSGGNLSGNPWGAVIILIGSM 160
Cdd:PRK11272  81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393 161 SWAFGSVYGSRIELPTGMMAGAIEMLAAGIVLLLASTLTGEKLTALPDLSGFLAVGYLALFGSIIAINAYMFLIRNVSPA 240
Cdd:PRK11272 161 SWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPA 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 544825393 241 VATSYAYVNPVVAVLLGTGLGGETLSPVEWIALGIIVFAVVLVTLGKYLLPA 292
Cdd:PRK11272 241 LATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYLFPA 292
 
Name Accession Description Interval E-value
PRK11272 PRK11272
putative DMT superfamily transporter inner membrane protein; Provisional
1-292 5.48e-162

putative DMT superfamily transporter inner membrane protein; Provisional


Pssm-ID: 183067 [Multi-domain]  Cd Length: 292  Bit Score: 452.51  E-value: 5.48e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393   1 MRFRQLLPLIGALFSLYIIWGSTYFVIRIGVESWPPLMMAGIRFLSAGILLLAFLMLRGHKLPPLRPMLNAALIGLLLLA 80
Cdd:PRK11272   1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  81 VGNGFVTIAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIRTRKLEWLGIGIGLAGIVLLNSGGNLSGNPWGAVIILIGSM 160
Cdd:PRK11272  81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393 161 SWAFGSVYGSRIELPTGMMAGAIEMLAAGIVLLLASTLTGEKLTALPDLSGFLAVGYLALFGSIIAINAYMFLIRNVSPA 240
Cdd:PRK11272 161 SWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPA 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 544825393 241 VATSYAYVNPVVAVLLGTGLGGETLSPVEWIALGIIVFAVVLVTLGKYLLPA 292
Cdd:PRK11272 241 LATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYLFPA 292
2A78 TIGR00950
Carboxylate/Amino Acid/Amine Transporter; [Transport and binding proteins, Amino acids, ...
20-281 2.62e-48

Carboxylate/Amino Acid/Amine Transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273359 [Multi-domain]  Cd Length: 260  Bit Score: 162.09  E-value: 2.62e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393   20 WGSTYFVIRIGVESWPPLMMAGIRFLSAGILLLAFLMLRGhklPPLRPMLNAALIGLLLLAVGNGFVTIAEHQnVPSGIA 99
Cdd:TIGR00950   1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR---PPLKRLLRLLLLGALQIGVFYVLYFVAVKR-LPVGEA 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  100 AVVVATVPLFTLCFSRLFG-IRTRKLEWLGIGIGLAGIVLLNSGGNLSGNPWGAVIILIGSMSWAFGSVYGSRIELPTGM 178
Cdd:TIGR00950  77 ALLLYLAPLYVTLLSDLMGkERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  179 ---MAGAIEMLAAGIVLLLASTLTGEKLTALPdlSGFLAVGYLALFGSIIAINAYMFLIRNVSPAVATSYAYVNPVVAVL 255
Cdd:TIGR00950 157 ellQFTGWVLLLGALLLLPFAWFLGPNPQALS--LQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALL 234
                         250       260
                  ....*....|....*....|....*.
gi 544825393  256 LGTGLGGETLSPVEWIALGIIVFAVV 281
Cdd:TIGR00950 235 LGLLILGETLSLPQLIGGALIIAAVL 260
RhaT COG0697
Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and ...
10-287 3.38e-36

Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only];


Pssm-ID: 440461 [Multi-domain]  Cd Length: 290  Bit Score: 131.12  E-value: 3.38e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  10 IGALFSLYIIWGSTYFVIRIGVESWPPLMMAGIRFLSAGILLLAFLMLRGHKLPPL--RPMLNAALIGLLLLAVGNGFVT 87
Cdd:COG0697    5 ILLLLLAALLWGSSFVAIKLALAGLPPLQLAFLRFLLAALLLLPLLLLRGRRLPPLsrRDWLLLLLRGLLGLALAFLLFF 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  88 IAEhQNVPSGIAAVVVATVPLFTLCFSRLF-GIRTRKLEWLGIGIGLAGIVLLNSGGNLSG--NPWGAVIILIGSMSWAF 164
Cdd:COG0697   85 LAL-QYTPAALAALLLALAPLFVALLAALLlGERLSRRRWLGLLLGFAGVLLIVGPGGGGGggSLLGDLLALLAALSWAL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393 165 GSVYGSRIELPTGMMAG-AIEMLAAGIVLLLASTLTGekLTALPDLSGFLAVGYLALFGSIIAINAYMFLIRNVSPAVAT 243
Cdd:COG0697  164 YTVLTRRLSRRLDPLTLtFWQMLVGALLLLPLALLTG--LPLPLSAAAWLALLYLGLFGTALAYLLWFRALRRLGASRAA 241
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 544825393 244 SYAYVNPVVAVLLGTGLGGETLSPVEWIALGIIVFAVVLVTLGK 287
Cdd:COG0697  242 PLTYLEPVFAVLLGWLLLGEPLTPLQLLGAALILAGVLLAALRE 285
EamA pfam00892
EamA-like transporter family; This family includes many hypothetical membrane proteins of ...
18-141 3.31e-11

EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.


Pssm-ID: 307170  Cd Length: 136  Bit Score: 59.90  E-value: 3.31e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393   18 IIWGSTYFVIRIGVESWPPLMMAGIRFLSAGILLLAFLMLRGHKLPPLRPMLNAALIGLLLLAVGNGFVTIAEHQNVPSG 97
Cdd:pfam00892  12 LIWAIYFVFSKILLRRISPLTLTFWRFLIAGILLLPFALFTGGKLVIPLKSWLALLYLGVLGTFLGFLLYFYGLKYVSAS 91
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 544825393   98 IAAVVVATVPLFTLCFSRLF-GIRTRKLEWLGIGIGLAGIVLLNS 141
Cdd:pfam00892  92 NASVITSLSPVFTLILSVLLlGEKLTLKQLLGIVLILLGVLLILL 136
 
Name Accession Description Interval E-value
PRK11272 PRK11272
putative DMT superfamily transporter inner membrane protein; Provisional
1-292 5.48e-162

putative DMT superfamily transporter inner membrane protein; Provisional


Pssm-ID: 183067 [Multi-domain]  Cd Length: 292  Bit Score: 452.51  E-value: 5.48e-162
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393   1 MRFRQLLPLIGALFSLYIIWGSTYFVIRIGVESWPPLMMAGIRFLSAGILLLAFLMLRGHKLPPLRPMLNAALIGLLLLA 80
Cdd:PRK11272   1 MRFRQLLPLFGALFALYIIWGSTYLVIRIGVESWPPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  81 VGNGFVTIAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIRTRKLEWLGIGIGLAGIVLLNSGGNLSGNPWGAVIILIGSM 160
Cdd:PRK11272  81 VGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRLFGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASA 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393 161 SWAFGSVYGSRIELPTGMMAGAIEMLAAGIVLLLASTLTGEKLTALPDLSGFLAVGYLALFGSIIAINAYMFLIRNVSPA 240
Cdd:PRK11272 161 SWAFGSVWSSRLPLPVGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPA 240
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|..
gi 544825393 241 VATSYAYVNPVVAVLLGTGLGGETLSPVEWIALGIIVFAVVLVTLGKYLLPA 292
Cdd:PRK11272 241 LATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYLFPA 292
2A78 TIGR00950
Carboxylate/Amino Acid/Amine Transporter; [Transport and binding proteins, Amino acids, ...
20-281 2.62e-48

Carboxylate/Amino Acid/Amine Transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273359 [Multi-domain]  Cd Length: 260  Bit Score: 162.09  E-value: 2.62e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393   20 WGSTYFVIRIGVESWPPLMMAGIRFLSAGILLLAFLMLRGhklPPLRPMLNAALIGLLLLAVGNGFVTIAEHQnVPSGIA 99
Cdd:TIGR00950   1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRRR---PPLKRLLRLLLLGALQIGVFYVLYFVAVKR-LPVGEA 76
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  100 AVVVATVPLFTLCFSRLFG-IRTRKLEWLGIGIGLAGIVLLNSGGNLSGNPWGAVIILIGSMSWAFGSVYGSRIELPTGM 178
Cdd:TIGR00950  77 ALLLYLAPLYVTLLSDLMGkERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVKKEGP 156
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  179 ---MAGAIEMLAAGIVLLLASTLTGEKLTALPdlSGFLAVGYLALFGSIIAINAYMFLIRNVSPAVATSYAYVNPVVAVL 255
Cdd:TIGR00950 157 ellQFTGWVLLLGALLLLPFAWFLGPNPQALS--LQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALL 234
                         250       260
                  ....*....|....*....|....*.
gi 544825393  256 LGTGLGGETLSPVEWIALGIIVFAVV 281
Cdd:TIGR00950 235 LGLLILGETLSLPQLIGGALIIAAVL 260
RhaT COG0697
Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and ...
10-287 3.38e-36

Permease of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism, Amino acid transport and metabolism, General function prediction only];


Pssm-ID: 440461 [Multi-domain]  Cd Length: 290  Bit Score: 131.12  E-value: 3.38e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  10 IGALFSLYIIWGSTYFVIRIGVESWPPLMMAGIRFLSAGILLLAFLMLRGHKLPPL--RPMLNAALIGLLLLAVGNGFVT 87
Cdd:COG0697    5 ILLLLLAALLWGSSFVAIKLALAGLPPLQLAFLRFLLAALLLLPLLLLRGRRLPPLsrRDWLLLLLRGLLGLALAFLLFF 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  88 IAEhQNVPSGIAAVVVATVPLFTLCFSRLF-GIRTRKLEWLGIGIGLAGIVLLNSGGNLSG--NPWGAVIILIGSMSWAF 164
Cdd:COG0697   85 LAL-QYTPAALAALLLALAPLFVALLAALLlGERLSRRRWLGLLLGFAGVLLIVGPGGGGGggSLLGDLLALLAALSWAL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393 165 GSVYGSRIELPTGMMAG-AIEMLAAGIVLLLASTLTGekLTALPDLSGFLAVGYLALFGSIIAINAYMFLIRNVSPAVAT 243
Cdd:COG0697  164 YTVLTRRLSRRLDPLTLtFWQMLVGALLLLPLALLTG--LPLPLSAAAWLALLYLGLFGTALAYLLWFRALRRLGASRAA 241
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 544825393 244 SYAYVNPVVAVLLGTGLGGETLSPVEWIALGIIVFAVVLVTLGK 287
Cdd:COG0697  242 PLTYLEPVFAVLLGWLLLGEPLTPLQLLGAALILAGVLLAALRE 285
RhtA COG5006
Threonine/homoserine efflux transporter RhtA [Amino acid transport and metabolism];
92-286 3.09e-14

Threonine/homoserine efflux transporter RhtA [Amino acid transport and metabolism];


Pssm-ID: 444030 [Multi-domain]  Cd Length: 290  Bit Score: 71.39  E-value: 3.09e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  92 QNVPSGIAAVVVATVPLFTLcfsrLFGIRtRKLEWLGIGIGLAGIVLL--NSGGNLSGNPWGAVIILIGSMSWAFGSVYG 169
Cdd:COG5006   90 ARIPLGIAVALEFLGPLAVA----LLGSR-RRRDLLWVALALAGVVLLlpVGLSGGSLDPVGVLFALGAAACWALYILLG 164
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393 170 SRI-ELPTGMMAGAIEMLAAGIVLLLASTLTGekLTALPDLSGFLAVGYLALFGSIIAINAYMFLIRNVSPAVATSYAYV 248
Cdd:COG5006  165 RRVgARLPGLTGLALGMLVAALVLLPFGLPTA--GPALLDPPVLLLGLGVAVLSSVLPYSLEMVALRRLPARTFGILMSL 242
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 544825393 249 NPVVAVLLGTGLGGETLSPVEWIALGIIVFAVVLVTLG 286
Cdd:COG5006  243 EPAVAALAGWLVLGEVLTPLQWLGIALVVAASAGATLT 280
EamA pfam00892
EamA-like transporter family; This family includes many hypothetical membrane proteins of ...
18-141 3.31e-11

EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.


Pssm-ID: 307170  Cd Length: 136  Bit Score: 59.90  E-value: 3.31e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393   18 IIWGSTYFVIRIGVESWPPLMMAGIRFLSAGILLLAFLMLRGHKLPPLRPMLNAALIGLLLLAVGNGFVTIAEHQNVPSG 97
Cdd:pfam00892  12 LIWAIYFVFSKILLRRISPLTLTFWRFLIAGILLLPFALFTGGKLVIPLKSWLALLYLGVLGTFLGFLLYFYGLKYVSAS 91
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 544825393   98 IAAVVVATVPLFTLCFSRLF-GIRTRKLEWLGIGIGLAGIVLLNS 141
Cdd:pfam00892  92 NASVITSLSPVFTLILSVLLlGEKLTLKQLLGIVLILLGVLLILL 136
EamA pfam00892
EamA-like transporter family; This family includes many hypothetical membrane proteins of ...
150-285 1.59e-10

EamA-like transporter family; This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.


Pssm-ID: 307170  Cd Length: 136  Bit Score: 57.98  E-value: 1.59e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  150 WGAVIILIGSMSWAFGSVYGSR-IELPTGMMAGAIEMLAAGIVLLLASTLTGEKLtaLPDLSGFLAVGYLALFGSIIAIN 228
Cdd:pfam00892   2 KGILLALLAALIWAIYFVFSKIlLRRISPLTLTFWRFLIAGILLLPFALFTGGKL--VIPLKSWLALLYLGVLGTFLGFL 79
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 544825393  229 AYMFLIRNVSPAVATSYAYVNPVVAVLLGTGLGGETLSPVEWIALGIIVFAVVLVTL 285
Cdd:pfam00892  80 LYFYGLKYVSASNASVITSLSPVFTLILSVLLLGEKLTLKQLLGIVLILLGVLLILL 136
PRK11453 PRK11453
O-acetylserine/cysteine exporter;
18-289 1.12e-04

O-acetylserine/cysteine exporter;


Pssm-ID: 183142 [Multi-domain]  Cd Length: 299  Bit Score: 42.89  E-value: 1.12e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  18 IIWGSTYFVIRIGVESWPPLMMAGIRFLSAGILLLAFLMlrghklPPLRPMLNAALIGLLLLAVGNGFVTIAEHQNVPSG 97
Cdd:PRK11453  14 VVWGLNFVVIKVGLHNMPPLMLAGLRFMLVAFPAIFFVA------RPKVPLNLLLGYGLTISFGQFAFLFCAINFGMPAG 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393  98 IAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIGIGLAGIVLLNSgGNLSGNP---WGAVIILIGSMSWAFGSVYGSRI- 172
Cdd:PRK11453  88 LASLVLQAQAFFTIVLGAFtFGERLQGKQLAGIALAIFGVLVLIE-DSLNGQHvamLGFMLTLAAAFSWACGNIFNKKIm 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393 173 ---ELPTGMMAGAIEMLAAGIVLLLASTLTGEKLTALP-----DLSGFLAVGYLALFGSIIAINAYMFLIRNVSPAVATS 244
Cdd:PRK11453 167 shsTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHslvtiDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAP 246
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*
gi 544825393 245 YAYVNPVVAVLLGTGLGGETLSpvewialGIIVFAVVLVTLGKYL 289
Cdd:PRK11453 247 LSLLVPVVGLASAALLLDERLT-------GLQFLGAVLIMAGLYI 284
RarD COG2962
Membrane protein RarD, contains two EamA domains, drug/metabolite transporter family [General ...
107-285 4.39e-04

Membrane protein RarD, contains two EamA domains, drug/metabolite transporter family [General function prediction only];


Pssm-ID: 442202 [Multi-domain]  Cd Length: 297  Bit Score: 41.25  E-value: 4.39e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393 107 PLFTLCFSRLF-GIRTRKLEWLGIGIGLAGIVLLNSGgnLSGNPWGAVIIligSMSWAFgsvYG-SRIELPTGMMAG-AI 183
Cdd:COG2962  109 PLVSVLLGVLFlKERLRRLQWLAVGLAAAGVLVLTVG--YGSLPWIALVL---ALSFGL---YGlLRKKLPVDALTGlTL 180
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544825393 184 EML-----AAGIVLLLASTLTGEKLTALPDLSGFLAVGYLAlfgSIIAINAYMFLIRNVSPAVATSYAYVNPVVAVLLGT 258
Cdd:COG2962  181 ETLlllplALAYLLWLAATGTGAFGSAGPGLTLLLLLAGVV---TAVPLLLFAAAARRLPLSTLGLLQYIAPTLQFLLAV 257
                        170       180
                 ....*....|....*....|....*..
gi 544825393 259 GLGGETLSPVEWIALGIIVFAVVLVTL 285
Cdd:COG2962  258 FVFGEPFTPARLITFGLIWLALALFSL 284
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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