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Conserved domains on  [gi|544826319|ref|WP_021242311|]
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MULTISPECIES: fimbrial protein [Enterobacter]

Protein Classification

fimbrial protein( domain architecture ID 646)

fimbrial protein similar to the type-1 fimbrial major subunit FimA, which is transported to the outer membrane by the lipoprotein sorting system, and a mature or processed FimA protein on the outer membrane is autopolymerized to form Fim fimbriae

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Fimbrial super family cl01416
Fimbrial protein;
3-186 2.02e-49

Fimbrial protein;


The actual alignment was detected with superfamily member PRK09733:

Pssm-ID: 445401  Cd Length: 181  Bit Score: 158.19  E-value: 2.02e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   3 MGKKILLAVTIAAAVSGSAFAaEQGSGKIKFKGVVIDAPCSIAPDSVDKEVDLGEVTTAVINANKKSSAVPVDINLENCQ 82
Cdd:PRK09733   1 AFKKSLLVAGVAMILSNNVFA-DEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCM 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  83 LDDpadeTDTPVTKVDVTFTSSATDATDTSLMTNTYAS---GAQNVGVRLLNNAEANITLGAANEVALLAGSTTQTLHFK 159
Cdd:PRK09733  80 LSQ----GGTTYSKAKVTFTTANTMTGQSDLLKNTKETeigGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFK 155

                        170       180
                 ....*....|....*....|....*..
gi 544826319 160 ALMEVVtGKTATAGQVEATANYILAYK 186
Cdd:PRK09733 156 ARMESP-SKDATPGNVYAQADYKIAYE 181
 
Name Accession Description Interval E-value
PRK09733 PRK09733
fimbrial-like protein;
3-186 2.02e-49

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 158.19  E-value: 2.02e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   3 MGKKILLAVTIAAAVSGSAFAaEQGSGKIKFKGVVIDAPCSIAPDSVDKEVDLGEVTTAVINANKKSSAVPVDINLENCQ 82
Cdd:PRK09733   1 AFKKSLLVAGVAMILSNNVFA-DEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCM 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  83 LDDpadeTDTPVTKVDVTFTSSATDATDTSLMTNTYAS---GAQNVGVRLLNNAEANITLGAANEVALLAGSTTQTLHFK 159
Cdd:PRK09733  80 LSQ----GGTTYSKAKVTFTTANTMTGQSDLLKNTKETeigGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFK 155

                        170       180
                 ....*....|....*....|....*..
gi 544826319 160 ALMEVVtGKTATAGQVEATANYILAYK 186
Cdd:PRK09733 156 ARMESP-SKDATPGNVYAQADYKIAYE 181
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
5-186 2.66e-35

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 121.68  E-value: 2.66e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   5 KKILLAVTIAAAVSgsAFAAEQGSGKIKFKGVVIDAPCSIAPDSVDKEVDLGEVTTAVIN-ANKKSSAVPVDINLENCql 83
Cdd:COG3539    2 KKLLLALLLALALS--AAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNgVGSTSGPKPFSIKLTNC-- 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  84 ddpadeTDTPVTKVDVTFTsSATDATDTSLMTNTYASGAQNVGVRLLNNAEANITLGAANEVALLAGSTTQTLHFKALMe 163
Cdd:COG3539   78 ------DAGTSNSVKVTFT-GTADSANPGLLANTGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARY- 149

                        170       180
                 ....*....|....*....|...
gi 544826319 164 VVTGKTATAGQVEATANYILAYK 186
Cdd:COG3539  150 VATGATVTAGSFNATATFTIDYQ 172
Fimbrial pfam00419
Fimbrial protein;
31-186 5.42e-12

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 60.53  E-value: 5.42e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   31 IKFKGVV--IDAPCSIAPDSVDkEVDLGEV-TTAVINANKKSSAVPVDINLeNCQLDDPADetdtpvtKVDVTFTSSATD 107
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPI-EVDFGQIpVNELNAGGEGSRQKPFSITL-ECSSGSSAV-------KVTVGLFGTADA 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  108 ATDTSLMTNTYASGAQNVGVRLLNNAEANITLGAANEVALLAGSTTQ--TLHFKALMEVVTGKTATAGQVEATANYILAY 185
Cdd:pfam00419  72 SSPNLLLTGNGAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVatGITFTASLVATTGGTPTAGDFNATATIVVDY 151


                  .
gi 544826319  186 K 186
Cdd:pfam00419 152 Q 152
 
Name Accession Description Interval E-value
PRK09733 PRK09733
fimbrial-like protein;
3-186 2.02e-49

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 158.19  E-value: 2.02e-49
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   3 MGKKILLAVTIAAAVSGSAFAaEQGSGKIKFKGVVIDAPCSIAPDSVDKEVDLGEVTTAVINANKKSSAVPVDINLENCQ 82
Cdd:PRK09733   1 AFKKSLLVAGVAMILSNNVFA-DEGHGIVKFKGEVISAPCSIKPGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCM 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  83 LDDpadeTDTPVTKVDVTFTSSATDATDTSLMTNTYAS---GAQNVGVRLLNNAEANITLGAANEVALLAGSTTQTLHFK 159
Cdd:PRK09733  80 LSQ----GGTTYSKAKVTFTTANTMTGQSDLLKNTKETeigGATGVGVRILDSQSGEVTLGTPVVITFNNTNSYQELNFK 155

                        170       180
                 ....*....|....*....|....*..
gi 544826319 160 ALMEVVtGKTATAGQVEATANYILAYK 186
Cdd:PRK09733 156 ARMESP-SKDATPGNVYAQADYKIAYE 181
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
5-186 2.66e-35

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 121.68  E-value: 2.66e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   5 KKILLAVTIAAAVSgsAFAAEQGSGKIKFKGVVIDAPCSIAPDSVDKEVDLGEVTTAVIN-ANKKSSAVPVDINLENCql 83
Cdd:COG3539    2 KKLLLALLLALALS--AAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNgVGSTSGPKPFSIKLTNC-- 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  84 ddpadeTDTPVTKVDVTFTsSATDATDTSLMTNTYASGAQNVGVRLLNNAEANITLGAANEVALLAGSTTQTLHFKALMe 163
Cdd:COG3539   78 ------DAGTSNSVKVTFT-GTADSANPGLLANTGSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARY- 149

                        170       180
                 ....*....|....*....|...
gi 544826319 164 VVTGKTATAGQVEATANYILAYK 186
Cdd:COG3539  150 VATGATVTAGSFNATATFTIDYQ 172
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 5-186 8.11e-22

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 86.95  E-value: 8.11e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   5 KKILLAVTIAAAVSGSAFAAEQGSGKIKFKGVVIDAPCSIAPDSVDKEVDLGEVTTAVINA-NKKSSAVPVDINLENCQL 83
Cdd:PRK15209   2 KKVVFALSALALTSTSVFAAESGDGTVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAiGDKSSAKPFQIKLEDCDI 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  84 ddpadetdTPVTKVDVTFtSSATDATDTSLMT-NTYASGAQNVGVRLLNNAEANITLGAANEVALLAGSTTqTLHFKAlM 162
Cdd:PRK15209  82 --------TTNKKVNVSF-NGVGDADDSTLVSvSTEAGAATGVGIGIYDNANTLVELNTGKSTTTLAAGQT-VLYFTA-N 150

                        170       180
                 ....*....|....*....|....
gi 544826319 163 EVVTGKTATAGQVEATANYILAYK 186
Cdd:PRK15209 151 YVSTKDTVTTGYGNAEVDFNLSYE 174
PRK15210 PRK15210
fimbrial protein;
3-185 8.41e-17

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 74.35  E-value: 8.41e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   3 MGKKILLAVTIAAAVSG-SAFAAEQ-------GSGKIKFKGVVIDAPCSIAPDSVDKEVDLGEVTTAVIN-ANKKSSAVP 73
Cdd:PRK15210   1 MRNKIILAMAAAGMMYGaSVFAADTtptagpfGSGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNtADATTESKP 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  74 VDINLENCQLDdpADETDTP-----VTKVDVTFTSSAtdatDTSLMTNTYASGAQNVGVRLLNN-----AEANITLGAAN 143
Cdd:PRK15210  81 FTIHLQNCAFD--PNIPDTAgsagkMSKVTVSFSGTA----NTSKKAYTTSGSAQHVGVQLLKSdntsiIEPNTPMPDGD 154

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 544826319 144 EVALLAGSttQTLHFKALMEVVTgKTATAGQVEATANYILAY 185
Cdd:PRK15210 155 AQQLQAGN--NELNFFARLIALD-NGVTPGDFNASVTYTLKY 193
Fimbrial pfam00419
Fimbrial protein;
31-186 5.42e-12

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 60.53  E-value: 5.42e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   31 IKFKGVV--IDAPCSIAPDSVDkEVDLGEV-TTAVINANKKSSAVPVDINLeNCQLDDPADetdtpvtKVDVTFTSSATD 107
Cdd:pfam00419   1 INFTGTVtrVPATCKITAGTPI-EVDFGQIpVNELNAGGEGSRQKPFSITL-ECSSGSSAV-------KVTVGLFGTADA 71

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  108 ATDTSLMTNTYASGAQNVGVRLLNNAEANITLGAANEVALLAGSTTQ--TLHFKALMEVVTGKTATAGQVEATANYILAY 185
Cdd:pfam00419  72 SSPNLLLTGNGAGAATGVGIRLYDANGGALPPNNGTSSIPVSATAAVatGITFTASLVATTGGTPTAGDFNATATIVVDY 151


                  .
gi 544826319  186 K 186
Cdd:pfam00419 152 Q 152
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
8-186 6.68e-12

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 61.12  E-value: 6.68e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   8 LLAVTIAAA--VSGSAFAAEQ-----GSGKIKFKGVVIDAPCSIAPDSVDKEVDLGEVTTAVINANKKSSA-VPVDINLE 79
Cdd:PRK15194   5 FISSAIASLlfVAGAAYAADPtpvsvDGGTIHFEGELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTAlIPFTIQLN 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  80 NCqlddpadetDTPVTKVDVTFTSSATDATDTSLMTNTYASG---AQNVGVRLLNNAEANITLGAAN---EVALLAGstT 153
Cdd:PRK15194  85 DC---------DPVVAATAAVAFSGQADATNDNLLAVASSTNtttATGVGIEILDNTSSILKPDGATfsaNQNLIEG--T 153

                        170       180       190
                 ....*....|....*....|....*....|...
gi 544826319 154 QTLHFKALMEvVTGKTATAGQVEATANYILAYK 186
Cdd:PRK15194 154 NTLHFSARYK-ATGTSASAGQANADATFIMKYE 185
PRK15261 PRK15261
fimbrial protein SteA; Provisional
 6-185 8.33e-11

fimbrial protein SteA; Provisional


Pssm-ID: 185169  Cd Length: 195  Bit Score: 58.25  E-value: 8.33e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   6 KILLAVTIAAAVSGSAFAAEQGSGKIKFKGVVIDAPCSIAPDSVDKEVDLGEVTTAVINANKKSS---AVPVDINLENCQ 82
Cdd:PRK15261   8 KLAVTASLVMGIVSGAQAAGSNTAKVTFLGNIVDSPCSVTLDTEDQTVNMGSSIGNGTLSNGKTTinnARTFHIDLEGCT 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  83 LddpADETDTPVTKVDVTFTSSATDATDTSLMTNTYASGA-QNVGVRLLNNAEANITLG--AANEVALLAGST----TQT 155
Cdd:PRK15261  88 W---ATEKNMNVVFTTGSGTTAATGATDNLALMKTDGTGAiSNVSLAIGDAGKNNIKLGdtYTQAIADLDGDTildeKQS 164

                        170       180       190
                 ....*....|....*....|....*....|
gi 544826319 156 LHFKALMEVVTGKTATAGQVEATANYILAY 185
Cdd:PRK15261 165 LNFTAWLVGAATGTVGTGEFSSAANVTISY 194
PRK09934 PRK09934
fimbriae assembly protein;
5-185 2.84e-09

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 53.74  E-value: 2.84e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   5 KKILLAVTIAAAVSGSAFAAEQ-GSGKIKFKGVVIDAPCSIAPDSVDKEVDLGE-VTTAVINANKKSSAVPVDINLENCq 82
Cdd:PRK09934   2 RRVFFACFCGLLWSPLSWAADPlGEINIELHGNVVDFTCTVNTADSDKTVDLGTwPTKQLLNAGDTTQPVPFSLKLEGC- 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  83 lddpadetdtPVTKVDVTFTssATDATDTSLMTNTYASGAQNVGVRLLNNAEANITLGAANEVALLAGSTTQTLHFKAlM 162
Cdd:PRK09934  81 ----------PPGSASITFT--GTPASDTNLLALDDPAMAQTVAIEIRDSDRSRLALGQASPTVEVDANGNATLNFYA-N 147

                        170       180
                 ....*....|....*....|...
gi 544826319 163 EVVTGKTATAGQVEATANYILAY 185
Cdd:PRK09934 148 YIALADGVQPGVAKADATFMINY 170
PRK15283 PRK15283
fimbrial major subunit StfA;
1-185 1.22e-07

fimbrial major subunit StfA;


Pssm-ID: 185183  Cd Length: 186  Bit Score: 49.38  E-value: 1.22e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   1 MYMGKKILLAVTIAAAVSGSAFAAEQGSGKIKFKGVVIDAPCSIAPDSVDKEVDLGEVTTAVINANKKSSAVPVDINLEN 80
Cdd:PRK15283   1 MNTAVKAAVAAALVMGVSSFANAAGSNTGTVTFTGTIEDSPCSIVVGDEHQTVNLGHIGTGSLMGGKESSKVDFHIGLEN 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  81 CQLDDPADETdtpvTKVDVTFTSSATDATDTSLMTntyASGAQNVGVRLL--NNAEANITLG-AANEVALLAGSTT---Q 154
Cdd:PRK15283  81 CAFTTEKEAS----TVFSAIGNESSANPGSVALMR---IGGGEMAGSSIVigNHLGSAIKLGdAYSENLTMNGSVAaakQ 153

                        170       180       190
                 ....*....|....*....|....*....|..
gi 544826319 155 TLHFKALME-VVTGKTATAGQVEATANYILAY 185
Cdd:PRK15283 154 TLNFKAWVKgDSAASTIDTGEFSSTVNFTISY 185
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 20-186 1.27e-07

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 49.33  E-value: 1.27e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  20 SAFAAEQGSGKIKFKGVVIDAPCSIAPDSVDKEVDLGEVTT-AVINANKKSSAVPVDINLENCqlddpadetDTPVTKVD 98
Cdd:PRK15191  14 AASGVQAHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQrQFYRAGDGSAWQPFAIDLQNC---------GSTASGVT 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  99 VTFtSSATDATDTSLMTNTYA-SGAQNVGVRLLNNAEANITLGAANEVALLA-GSTTQTLHFKALMeVVTGKTATAGQVE 176
Cdd:PRK15191  85 VSF-SGAADSRNTDLLALTAGeSDASGIGIALYDQNKTLIPLGQESDVVTLSpGQASAHLQFYARY-LADGGAVTPGDAN 162

                        170
                 ....*....|
gi 544826319 177 ATANYILAYK 186
Cdd:PRK15191 163 ASATFILAYE 172
PRK09723 PRK09723
fimbrial-like adhesin;
53-185 1.51e-06

fimbrial-like adhesin;


Pssm-ID: 236617  Cd Length: 421  Bit Score: 47.09  E-value: 1.51e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  53 VDLGEVTTAVINANkkSSAVPVDINLENCQLddpadetdtpVTKVDVTFTSSATDATDTSLMTNTYAS--GAQNVGVR-- 128
Cdd:PRK09723 276 VKMGEYSAEQIKNG--ATPVPFDISLQNCVR----------VRNIETKLVSTKVGTENKQLLGNTLTGndAAKGVGVLie 343

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 544826319 129 -LLNNAEANITL------------------GAANEVALLAG-STTQTLHFKALMEVVTGKTATAGQVEATANYILAY 185
Cdd:PRK09723 344 gLKNSKSPQMTLkpndstsvykdyetpdedDTTGGIYPDQGnGTTQPLHFQATLKQDGNIAIEPGEFKATSTFQVTY 420
PRK15187 PRK15187
fimbrial protein BcfA; Provisional
 5-185 6.00e-05

fimbrial protein BcfA; Provisional


Pssm-ID: 185109  Cd Length: 180  Bit Score: 41.73  E-value: 6.00e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   5 KKILLAVTIAAAVSGSAFAAEQGS------GKIKFKGVVIDAPCSIAPDSVDKEVDLGEV-----TTAVINANKKSSavp 73
Cdd:PRK15187   2 KKPVLALMVSAIAFGGMLSTAQADtttvtgGTVNFVGQVVDAACSVSADSVDQTVTLGQVrasklTEAGMVANQKED--- 78

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  74 VDINLENCqlddpadetDTPVTKVDVTFTSSATDATDTSLMTNTYASG-AQNVGVRLLNNAEANITLG-AANEVALLAGS 151
Cdd:PRK15187  79 FTIKLEDC---------DTQTSQNAAVIFNGQQDANQPGSLANTAGAGsATNVALQLYGPDGQALNIGeSSSTVTLNDGE 149

                        170       180       190
                 ....*....|....*....|....*....|....
gi 544826319 152 TTQTLHfkalMEVVTGKTATAGQVEATANYILAY 185
Cdd:PRK15187 150 NVIPLS----VDYIATGTATAGNVTATATFSMVY 179
lpfA PRK15289
fimbrial protein; Provisional
 17-186 6.41e-05

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 41.87  E-value: 6.41e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  17 VSGSAFAAEqgsGKIKFKGVVIDAPCSIAPDSVDKEVDLGEVT-TAVINANKKSSAVPVDINLENC-----QLDDPADET 90
Cdd:PRK15289  17 LAGHALAED---GVVHFVGEIVDTTCEVTSDTADQIVPLGKVSkNAFSGVGSLASPQKFSIKLENCpatytQAAVRFDGT 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  91 DTPVTKVDVTFTSSATDATDTSLMTNTYASGAQNVGVRLLNNAEaNITLGAANEVALLAGSTTQTLHFKALME-VVTGKT 169
Cdd:PRK15289  94 EAPGGDGDLKVGTPLTAGNPGDFTGTGQAIAATGVGIRIFNQSD-NSQVKLYNDSAYTAIDAEGKAEMKFIARyVATNAT 172

                        170
                 ....*....|....*..
gi 544826319 170 ATAGQVEATANYILAYK 186
Cdd:PRK15289 173 VTAGTANADSQFTVEYK 189
PRK15300 PRK15300
fimbrial protein StiA; Provisional
 1-185 9.63e-05

fimbrial protein StiA; Provisional


Pssm-ID: 185200  Cd Length: 179  Bit Score: 41.23  E-value: 9.63e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   1 MYMGKKILLAVTIAAAVSGSAFAAEQGSGKIKFKGVVIDAPCSIAPDSVDKEVDlGEVTTAVINANKKSSAVPVDINLEN 80
Cdd:PRK15300   1 MKLSLKTLTVALAAITLSPAALADTAKDGTVHITGLIKQNACTVKTDSVEVTLQ-EEFASLFTAAGQTAGDTDFTIELEN 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  81 CQLDdpadetdtPVTKVDVTFTSSaTDATDTSLMTNtyASGAQNVGVRLLNNAEANITL------GAANEVALLAGSTTQ 154
Cdd:PRK15300  80 CDAN--------VYSSVQARFEGT-LDGTDATILKN--EDDAENIGVQILDKTSTPMTFndlqawSAAVALPTAEGVTEL 148

                        170       180       190
                 ....*....|....*....|....*....|.
gi 544826319 155 TLHFKALMeVVTGKTATAGQVEATANYILAY 185
Cdd:PRK15300 149 SMPFTARY-IATAVPVKSGTVDATATFYLQY 178
PRK15293 PRK15293
fimbrial protein SthD;
8-186 3.43e-03

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 36.58  E-value: 3.43e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319   8 LLAVTIAAAVSGSAFAAEQGSGKIKFK--GVVIDAPCSIAPDSVdkeVDLGEVTTAVIN-ANKKSSAVPVDINLENCqld 84
Cdd:PRK15293  12 LLTFTGLALWSPSISAAYNTADAVDINvtGLIYADPCTVTVPDT---LSLGQYARADIAvAGGNTATIPFTIKMTNC--- 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544826319  85 dPADetdtpVTKVDVTFTSSATD--ATDTSLMTNTYASGAQNVGVRLLN---NAEANITLGAANEVALLAGSTTQTLHFK 159
Cdd:PRK15293  86 -PAT-----TTKAAISFNGVPYPdpNYASAIYANSAANPAQDLGLQLFNldgKSLVNLANNVTYTVDINSNTHEANLPVA 159

                        170       180
                 ....*....|....*....|....*..
gi 544826319 160 ALMEVVTGKtATAGQVEATANYILAYK 186
Cdd:PRK15293 160 ARMYTPYGK-VTAGDFTSVVTITIAWQ 185
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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