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Conserved domains on  [gi|544940603|ref|WP_021348932|]
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MULTISPECIES: DUF4241 domain-containing protein [Elizabethkingia]

Protein Classification

DUF4241 domain-containing protein( domain architecture ID 10623890)

DUF4241 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF4241 pfam14025
Protein of unknown function (DUF4241); This family of proteins is functionally uncharacterized. ...
48-233 2.00e-49

Protein of unknown function (DUF4241); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 205 and 315 amino acids in length. There is a conserved GDG sequence motif at the C-terminus.


:

Pssm-ID: 433653  Cd Length: 140  Bit Score: 158.93  E-value: 2.00e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544940603   48 IVIPTGNIMVRDPLVYLhqEELPYFIK-VPTGKFPLTTLVVEVDEG--HHRYVATRVKFTENKAVSYTEALIGNEDINSL 124
Cdd:pfam14025   1 LRLPSGRLVACDPLVNL--EDSPPFTEtVPPGTYPVELSVARVEDGgyDDRVAAARLVFSDEPAVRWELALRGGQDLAEL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544940603  125 NSGEYFGFNVDAGLATIVDTETRDLYCNFVDqwekenpegniydnffaqefkksyeknpefqrtdgdwinfkipgtdlSI 204
Cdd:pfam14025  79 GEGEFFGFGVDAGLGCFFDAKAFEALCDFED-----------------------------------------------NL 111
                         170       180
                  ....*....|....*....|....*....
gi 544940603  205 PMIQTGFGDGVYPAYFGYDENKNICELVV 233
Cdd:pfam14025 112 IIFQSGWGDGAYPVYFGYDEDGEVCCLVT 140
 
Name Accession Description Interval E-value
DUF4241 pfam14025
Protein of unknown function (DUF4241); This family of proteins is functionally uncharacterized. ...
48-233 2.00e-49

Protein of unknown function (DUF4241); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 205 and 315 amino acids in length. There is a conserved GDG sequence motif at the C-terminus.


Pssm-ID: 433653  Cd Length: 140  Bit Score: 158.93  E-value: 2.00e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544940603   48 IVIPTGNIMVRDPLVYLhqEELPYFIK-VPTGKFPLTTLVVEVDEG--HHRYVATRVKFTENKAVSYTEALIGNEDINSL 124
Cdd:pfam14025   1 LRLPSGRLVACDPLVNL--EDSPPFTEtVPPGTYPVELSVARVEDGgyDDRVAAARLVFSDEPAVRWELALRGGQDLAEL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544940603  125 NSGEYFGFNVDAGLATIVDTETRDLYCNFVDqwekenpegniydnffaqefkksyeknpefqrtdgdwinfkipgtdlSI 204
Cdd:pfam14025  79 GEGEFFGFGVDAGLGCFFDAKAFEALCDFED-----------------------------------------------NL 111
                         170       180
                  ....*....|....*....|....*....
gi 544940603  205 PMIQTGFGDGVYPAYFGYDENKNICELVV 233
Cdd:pfam14025 112 IIFQSGWGDGAYPVYFGYDEDGEVCCLVT 140
 
Name Accession Description Interval E-value
DUF4241 pfam14025
Protein of unknown function (DUF4241); This family of proteins is functionally uncharacterized. ...
48-233 2.00e-49

Protein of unknown function (DUF4241); This family of proteins is functionally uncharacterized. This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 205 and 315 amino acids in length. There is a conserved GDG sequence motif at the C-terminus.


Pssm-ID: 433653  Cd Length: 140  Bit Score: 158.93  E-value: 2.00e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544940603   48 IVIPTGNIMVRDPLVYLhqEELPYFIK-VPTGKFPLTTLVVEVDEG--HHRYVATRVKFTENKAVSYTEALIGNEDINSL 124
Cdd:pfam14025   1 LRLPSGRLVACDPLVNL--EDSPPFTEtVPPGTYPVELSVARVEDGgyDDRVAAARLVFSDEPAVRWELALRGGQDLAEL 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 544940603  125 NSGEYFGFNVDAGLATIVDTETRDLYCNFVDqwekenpegniydnffaqefkksyeknpefqrtdgdwinfkipgtdlSI 204
Cdd:pfam14025  79 GEGEFFGFGVDAGLGCFFDAKAFEALCDFED-----------------------------------------------NL 111
                         170       180
                  ....*....|....*....|....*....
gi 544940603  205 PMIQTGFGDGVYPAYFGYDENKNICELVV 233
Cdd:pfam14025 112 IIFQSGWGDGAYPVYFGYDEDGEVCCLVT 140
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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