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Conserved domains on  [gi|545270201|ref|WP_021560322|]
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MULTISPECIES: toxin co-regulated pilus biosynthesis Q family protein [Enterobacteriaceae]

Protein Classification

toxin co-regulated pilus biosynthesis Q family protein( domain architecture ID 10566413)

toxin co-regulated pilus biosynthesis Q family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TcpQ pfam10671
Toxin co-regulated pilus biosynthesis protein Q; The toxin-coregulated pilus (TCP) of Vibrio ...
 351-441 2.08e-16

Toxin co-regulated pilus biosynthesis protein Q; The toxin-coregulated pilus (TCP) of Vibrio cholerae and the soluble TcpF protein that is secreted via the TCP biogenesis apparatus are essential for intestinal colonization in the disease of cholera. TcpQ is part of an outer membrane complex of the TCP biogenesis apparatus, comprised of TcpC and TcpQ, and the TcpQ is required for proper localization of TcpC to the outer membrane. The domain is found in other Proteobacterial species apart from Vibrio.


:

Pssm-ID: 431425  Cd Length: 80  Bit Score: 73.86  E-value: 2.08e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545270201  351 PGWTAEKGATLRQTLTRWAAQvpctvtghqpgQTWSVVWSASVDYPIDAAFTLRGGWKDVLTQTFDLYSRANTPLLGTLF 430
Cdd:pfam10671   1 QTWSAVKGETLRDTLQRWASQ-----------AGWTVVWDADVDYPVEASATFSGSFESAVRRVLSALANAGRPLKACFY 69

                          90
                  ....*....|.
gi 545270201  431 EKQCILSVRDR 441
Cdd:pfam10671  70 SKNRVVRVTDK 80
 
Name Accession Description Interval E-value
TcpQ pfam10671
Toxin co-regulated pilus biosynthesis protein Q; The toxin-coregulated pilus (TCP) of Vibrio ...
 351-441 2.08e-16

Toxin co-regulated pilus biosynthesis protein Q; The toxin-coregulated pilus (TCP) of Vibrio cholerae and the soluble TcpF protein that is secreted via the TCP biogenesis apparatus are essential for intestinal colonization in the disease of cholera. TcpQ is part of an outer membrane complex of the TCP biogenesis apparatus, comprised of TcpC and TcpQ, and the TcpQ is required for proper localization of TcpC to the outer membrane. The domain is found in other Proteobacterial species apart from Vibrio.


Pssm-ID: 431425  Cd Length: 80  Bit Score: 73.86  E-value: 2.08e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545270201  351 PGWTAEKGATLRQTLTRWAAQvpctvtghqpgQTWSVVWSASVDYPIDAAFTLRGGWKDVLTQTFDLYSRANTPLLGTLF 430
Cdd:pfam10671   1 QTWSAVKGETLRDTLQRWASQ-----------AGWTVVWDADVDYPVEASATFSGSFESAVRRVLSALANAGRPLKACFY 69

                          90
                  ....*....|.
gi 545270201  431 EKQCILSVRDR 441
Cdd:pfam10671  70 SKNRVVRVTDK 80
 
Name Accession Description Interval E-value
TcpQ pfam10671
Toxin co-regulated pilus biosynthesis protein Q; The toxin-coregulated pilus (TCP) of Vibrio ...
 351-441 2.08e-16

Toxin co-regulated pilus biosynthesis protein Q; The toxin-coregulated pilus (TCP) of Vibrio cholerae and the soluble TcpF protein that is secreted via the TCP biogenesis apparatus are essential for intestinal colonization in the disease of cholera. TcpQ is part of an outer membrane complex of the TCP biogenesis apparatus, comprised of TcpC and TcpQ, and the TcpQ is required for proper localization of TcpC to the outer membrane. The domain is found in other Proteobacterial species apart from Vibrio.


Pssm-ID: 431425  Cd Length: 80  Bit Score: 73.86  E-value: 2.08e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 545270201  351 PGWTAEKGATLRQTLTRWAAQvpctvtghqpgQTWSVVWSASVDYPIDAAFTLRGGWKDVLTQTFDLYSRANTPLLGTLF 430
Cdd:pfam10671   1 QTWSAVKGETLRDTLQRWASQ-----------AGWTVVWDADVDYPVEASATFSGSFESAVRRVLSALANAGRPLKACFY 69

                          90
                  ....*....|.
gi 545270201  431 EKQCILSVRDR 441
Cdd:pfam10671  70 SKNRVVRVTDK 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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