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MULTISPECIES: DUF2339 domain-containing protein [Enterobacter]
Protein Classification
DUF2339 domain-containing protein ( domain architecture ID 11475038 )
DUF2339 domain-containing protein
List of domain hits
Name
Accession
Description
Interval
E-value
COG5373
COG5373 Uncharacterized membrane protein [Function unknown];
10-869
3.50e-157
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain]
Cd Length: 854
Bit Score: 481.42
E-value: 3.50e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 10 L FLVFA L V V A p V L A V IGFN R STAA R QEIAR L RQRIEALEQHGV A EKA PEP VQT A ----- AP VET PAPVPEA VN AP VDPWR 84
Cdd:COG5373 4 L LILIG L L V L - A L L V GLLG R VARL R RRVEE L EAELAEAAEAAS A PAE PEP EAA A aataa AP EAA PAPVPEA PA AP PAAAE 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 85 PEP P VTE A E PA PVPA A KR P S A FGGILS sltrw FMQ GN P L AKL G IVL L F LG LS FL LR Y TV E HS L FPL ELRLA AT ALF AMG L 164
Cdd:COG5373 83 APA P AAA A P PA EAEP A AA P A A ASSFEE ----- WLG GN W L VWI G GLS L A LG GA FL VK Y SI E QG L LGP ELRLA LG ALF GLA L 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 165 LA V G W RLR H R --- QRI Y A L I LQGG AT G V LY L TVF G A F RL WQMLPMTL AF A LL VVICA A S V G LA V LQ KA L s LA M L AS LGGY 241
Cdd:COG5373 158 LA L G E RLR R R adg RAL Y P L A LQGG GI G T LY A TVF A A Y RL YGLIGPGT AF V LL ALVSL A T V A LA L LQ GP L - LA A L GL LGGY 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 242 L APLL L STG G G SF VALFS F YLLL SI GIL VISIWQH WR E LNLLG LLF TFG V G GV WG LSD Y Q PE NYVICQ LFLIA NT L I F GV 321
Cdd:COG5373 237 A APLL V STG S G NH VALFS Y YLLL NA GIL ALARFRR WR W LNLLG FAG TFG W G LL WG VLL Y R PE LFLSTE LFLIA FF L L F LA 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 322 FSVALS LR AQEKGKQII DG V LLF AP PL IG F GM Q YGMTSHWT YG P ALSAL GYGAF YL S LALL AL RR Y P SI grp L IM A A LA I 401
Cdd:COG5373 317 IALLFA LR HPGPLRGPV DG T LLF GT PL VA F AL Q LALVADSG YG L ALSAL ALALL YL A LALL LR RR R P AL --- L AL A F LA L 393
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 402 G GG FATLAIPLALSARWTA MA WALEGLG I LWLG VQ Q QQRRMSYSGTA L LVLA L GSAIW A QMNGVTSL - S L L LIFAV L S L C 480
Cdd:COG5373 394 G VA FATLAIPLALSARWTA AL WALEGLG L LWLG LR Q WRLLLRWWALL L QLAP L AALLA A YWPVANLA g S Y L WALLA L A L A 473
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 481 W L A AA WLWQ k IVLSG S WA L LVG G LLF W LV A Q L G A SQ L I L KTE L SVL A GV LAL t A VSAWGWRQA A A RL A W RE L DASKW LL W 560
Cdd:COG5373 474 A L F AA LALR - LARRR S AG L RLW G AAW W AL A A L A A IA L A L TLL L EEA A LT LAL - A LLVLSLAWL A R RL D W PL L RWLAA LL L 551
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 561 P VM LL MV L YQVWQQQILA AG WAN L A ----- WAI AL P AA LMM LRR D edkllp R IAMG L HLSL LW MIL L AM A A EL YWFARSL 635
Cdd:COG5373 552 P LV LL RL L WDPGLVGGPL AG FNW L L wgygg PLL AL A AA AWL LRR R ------ R LRRW L EAAA LW LLV L LL A L EL RYLLWGG 625
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 636 PWGMAA W GSG ---- I A MAVGGGVIMA L SAAV RR R G WPF R VWPALYAC LA MIPVVVA L VV LL VVTNFQDG V V Y rqtw LPL V 711
Cdd:COG5373 626 DLFASE W SLA eagl L A LLWLALALAL L RRWL RR A G RVY R LAALALGP LA ALSYLLL L LL LL NPLWSGAP V G Y ---- LPL L 701
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 712 NPL EEGAAFAL L G L VVFY R avdrh YPASLAQS R PWP A VVLMA LGF W WLN GALL R ALAW y G EV A WN mes L WH S R L I Q TTFA 791
Cdd:COG5373 702 NPL LLAYLLPA L L L ALWA R ----- LLLLAPRL R RAA A GLAGL LGF L WLN LEIR R LWHG - G DL A LW --- L GV S D L E Q YSYS 772
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 550714329 792 LF W MFC AL VVMIRAT R QA SR QQW LAGA V LLG V V ML KL M LVD S AG G GGL A R AVA FIG VAI L V L IV GY FS P L PP KAG E EK 869
Cdd:COG5373 773 IV W LLL AL ALLLLGI R RG SR ALR LAGA A LLG L V VA KL F LVD M AG L GGL L R ILS FIG LGL L L L GI GY LY P R PP RRA E AE 850
Name
Accession
Description
Interval
E-value
COG5373
COG5373 Uncharacterized membrane protein [Function unknown];
10-869
3.50e-157
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain]
Cd Length: 854
Bit Score: 481.42
E-value: 3.50e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 10 L FLVFA L V V A p V L A V IGFN R STAA R QEIAR L RQRIEALEQHGV A EKA PEP VQT A ----- AP VET PAPVPEA VN AP VDPWR 84
Cdd:COG5373 4 L LILIG L L V L - A L L V GLLG R VARL R RRVEE L EAELAEAAEAAS A PAE PEP EAA A aataa AP EAA PAPVPEA PA AP PAAAE 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 85 PEP P VTE A E PA PVPA A KR P S A FGGILS sltrw FMQ GN P L AKL G IVL L F LG LS FL LR Y TV E HS L FPL ELRLA AT ALF AMG L 164
Cdd:COG5373 83 APA P AAA A P PA EAEP A AA P A A ASSFEE ----- WLG GN W L VWI G GLS L A LG GA FL VK Y SI E QG L LGP ELRLA LG ALF GLA L 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 165 LA V G W RLR H R --- QRI Y A L I LQGG AT G V LY L TVF G A F RL WQMLPMTL AF A LL VVICA A S V G LA V LQ KA L s LA M L AS LGGY 241
Cdd:COG5373 158 LA L G E RLR R R adg RAL Y P L A LQGG GI G T LY A TVF A A Y RL YGLIGPGT AF V LL ALVSL A T V A LA L LQ GP L - LA A L GL LGGY 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 242 L APLL L STG G G SF VALFS F YLLL SI GIL VISIWQH WR E LNLLG LLF TFG V G GV WG LSD Y Q PE NYVICQ LFLIA NT L I F GV 321
Cdd:COG5373 237 A APLL V STG S G NH VALFS Y YLLL NA GIL ALARFRR WR W LNLLG FAG TFG W G LL WG VLL Y R PE LFLSTE LFLIA FF L L F LA 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 322 FSVALS LR AQEKGKQII DG V LLF AP PL IG F GM Q YGMTSHWT YG P ALSAL GYGAF YL S LALL AL RR Y P SI grp L IM A A LA I 401
Cdd:COG5373 317 IALLFA LR HPGPLRGPV DG T LLF GT PL VA F AL Q LALVADSG YG L ALSAL ALALL YL A LALL LR RR R P AL --- L AL A F LA L 393
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 402 G GG FATLAIPLALSARWTA MA WALEGLG I LWLG VQ Q QQRRMSYSGTA L LVLA L GSAIW A QMNGVTSL - S L L LIFAV L S L C 480
Cdd:COG5373 394 G VA FATLAIPLALSARWTA AL WALEGLG L LWLG LR Q WRLLLRWWALL L QLAP L AALLA A YWPVANLA g S Y L WALLA L A L A 473
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 481 W L A AA WLWQ k IVLSG S WA L LVG G LLF W LV A Q L G A SQ L I L KTE L SVL A GV LAL t A VSAWGWRQA A A RL A W RE L DASKW LL W 560
Cdd:COG5373 474 A L F AA LALR - LARRR S AG L RLW G AAW W AL A A L A A IA L A L TLL L EEA A LT LAL - A LLVLSLAWL A R RL D W PL L RWLAA LL L 551
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 561 P VM LL MV L YQVWQQQILA AG WAN L A ----- WAI AL P AA LMM LRR D edkllp R IAMG L HLSL LW MIL L AM A A EL YWFARSL 635
Cdd:COG5373 552 P LV LL RL L WDPGLVGGPL AG FNW L L wgygg PLL AL A AA AWL LRR R ------ R LRRW L EAAA LW LLV L LL A L EL RYLLWGG 625
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 636 PWGMAA W GSG ---- I A MAVGGGVIMA L SAAV RR R G WPF R VWPALYAC LA MIPVVVA L VV LL VVTNFQDG V V Y rqtw LPL V 711
Cdd:COG5373 626 DLFASE W SLA eagl L A LLWLALALAL L RRWL RR A G RVY R LAALALGP LA ALSYLLL L LL LL NPLWSGAP V G Y ---- LPL L 701
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 712 NPL EEGAAFAL L G L VVFY R avdrh YPASLAQS R PWP A VVLMA LGF W WLN GALL R ALAW y G EV A WN mes L WH S R L I Q TTFA 791
Cdd:COG5373 702 NPL LLAYLLPA L L L ALWA R ----- LLLLAPRL R RAA A GLAGL LGF L WLN LEIR R LWHG - G DL A LW --- L GV S D L E Q YSYS 772
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 550714329 792 LF W MFC AL VVMIRAT R QA SR QQW LAGA V LLG V V ML KL M LVD S AG G GGL A R AVA FIG VAI L V L IV GY FS P L PP KAG E EK 869
Cdd:COG5373 773 IV W LLL AL ALLLLGI R RG SR ALR LAGA A LLG L V VA KL F LVD M AG L GGL L R ILS FIG LGL L L L GI GY LY P R PP RRA E AE 850
DUF2339
pfam10101 Predicted membrane protein (DUF2339); This domain, found in various hypothetical bacterial ...
119-862
1.55e-77
Predicted membrane protein (DUF2339); This domain, found in various hypothetical bacterial proteins, has no known function.
Pssm-ID: 431054
Cd Length: 680
Bit Score: 265.76
E-value: 1.55e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 119 Q GN P L AK LG IVL L F LG LS FL LR Y TV E HS L FPL E L RLA AT ALF AMG LLA V G WR LR H R Q R - IY AL I LQGG ATG VLYLTV FG A 197
Cdd:pfam10101 1 G GN W L VW LG GLV L A LG GA FL VK Y AI E QG L LGP E V RLA LG ALF GLA LLA A G EW LR R R R R a GF AL A LQGG GLA VLYLTV YA A 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 198 FR L WQM LP MTL AFALL VVIC A AS V G LA V LQ KALS LA M L AS LGG Y LAPLL L STG G G SF VALF SFYL LL SIG IL VISIWQH W 277
Cdd:pfam10101 81 YA L YGL LP PGV AFALL ALVA A LA V A LA L LQ DGPA LA V L GL LGG F LAPLL V STG S G NP VALF GYLA LL NAA IL ALAWRRG W 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 278 R E LNLLG LLF TF GVGG v WG L SD Y Q P ENYVICQ LFL IANT L IF -------------------------------- GVFSVA 325
Cdd:pfam10101 161 R W LNLLG FAG TF AALW - GL L LY Y R P DGFASTE LFL LLFF L LY lallavgllafallaaallalawrreallala VLLALL 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 326 LSLRAQEKGKQII D GV L L F AP PL IG F GM QY GMTSHWT -- YG P ALSAL GYG A F YL S LA LLAL RR YPSIG R P L IM A A LA IGG 403
Cdd:pfam10101 240 FLALGFGRRRPPV D AT L V F GT PL AA F AL QY ALVGALD fd YG W ALSAL ALA A L YL A LA EWLA RR RRPRL R L L GE A F LA LAL 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 404 GF A TLAIPLALSA R WT AM AWALEG LGIL WL GVQQ Q Q RR MS ysgtallvlalgsaiwaqmngvtslsll LI F AVLS L CW LA 483
Cdd:pfam10101 320 GF L TLAIPLALSA A WT TL AWALEG AALA WL VGLR Q K RR LA ---------------------------- RR F GLPA L LF LA 371
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 484 A AW L WQKIV L SGSWA L LVGGLLF WL VAQ L gasqlilktelsvlagvlaltavsawgwrqaaarlawreldaskwllwpvm 563
Cdd:pfam10101 372 A SA L LLALL L RRLAL L PYLVGGG WL AWL L --------------------------------------------------- 400
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 564 llmvlyqvwqqqilaag W ANLAW A I AL PA A LMM LRR D ED K L lpri AMG LH LSL LW MI LL AM A A EL y WF A RSLPW G MAA W G 643
Cdd:pfam10101 401 ----------------- W GYGGP A A AL AL A ARL LRR R ED R L ---- RRW LH AAA LW LL LL LL A V EL - RY A LNGGL G AGG W P 458
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 644 S GIAM A VGGGVIM AL SAAVRR R GWPFRVWPA LY ACLAMI P VVVA L VVL L VVTNFQDGVVYRQT --- W LPL V NPL EEGA A F 720
Cdd:pfam10101 459 S LAEA A LPVLLWL AL ALLYLA R RRRRASLAR LY RGSGAL P LLAG L LGW L LLLVVLANPLWSGE avg G LPL L NPL DLAY A L 538
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 721 A L LG L VVFY R AVDRHY P ASLAQS R PWP AV VLM ALG FWWLNGALLRAL awyg E V A W NMES L WH S R L I Q ---- TTFALF W MF 796
Cdd:pfam10101 539 P L VL L LLWA R LLAGLR P LAPPLA R RAA AV LAA ALG ALFFVLLNAILI ---- R V P W QGAA L LL S D L V Q dael YSYSVV W LL 614
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 550714329 797 C A LVVMIRAT R QAS R QQW LAGA V LL GV V ML KL M L V D SA G G GGLAR A V A FIG VAI L V L IV GY FS P L P 862
Cdd:pfam10101 615 L A VALLLAGS R RGQ R RLR LAGA A LL AL V VA KL F L I D MS G L GGLAR I V S FIG LGL L L L GI GY LY P R P 680
PRK06549
PRK06549 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
47-98
6.15e-04
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
Pssm-ID: 235826 [Multi-domain]
Cd Length: 130
Bit Score: 40.57
E-value: 6.15e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 550714329 47 L E QH G VAEK A PE P V Q taa P VE TP A PVP EAVNAP V DPWR P E P PVT --- E A E P A P V P 98
Cdd:PRK06549 18 M E EI G APAQ A AA P A Q --- P AS TP V PVP TEASPQ V EAQA P Q P AAA aga D A M P S P M P 69
Name
Accession
Description
Interval
E-value
COG5373
COG5373 Uncharacterized membrane protein [Function unknown];
10-869
3.50e-157
Uncharacterized membrane protein [Function unknown];
Pssm-ID: 444140 [Multi-domain]
Cd Length: 854
Bit Score: 481.42
E-value: 3.50e-157
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 10 L FLVFA L V V A p V L A V IGFN R STAA R QEIAR L RQRIEALEQHGV A EKA PEP VQT A ----- AP VET PAPVPEA VN AP VDPWR 84
Cdd:COG5373 4 L LILIG L L V L - A L L V GLLG R VARL R RRVEE L EAELAEAAEAAS A PAE PEP EAA A aataa AP EAA PAPVPEA PA AP PAAAE 82
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 85 PEP P VTE A E PA PVPA A KR P S A FGGILS sltrw FMQ GN P L AKL G IVL L F LG LS FL LR Y TV E HS L FPL ELRLA AT ALF AMG L 164
Cdd:COG5373 83 APA P AAA A P PA EAEP A AA P A A ASSFEE ----- WLG GN W L VWI G GLS L A LG GA FL VK Y SI E QG L LGP ELRLA LG ALF GLA L 157
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 165 LA V G W RLR H R --- QRI Y A L I LQGG AT G V LY L TVF G A F RL WQMLPMTL AF A LL VVICA A S V G LA V LQ KA L s LA M L AS LGGY 241
Cdd:COG5373 158 LA L G E RLR R R adg RAL Y P L A LQGG GI G T LY A TVF A A Y RL YGLIGPGT AF V LL ALVSL A T V A LA L LQ GP L - LA A L GL LGGY 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 242 L APLL L STG G G SF VALFS F YLLL SI GIL VISIWQH WR E LNLLG LLF TFG V G GV WG LSD Y Q PE NYVICQ LFLIA NT L I F GV 321
Cdd:COG5373 237 A APLL V STG S G NH VALFS Y YLLL NA GIL ALARFRR WR W LNLLG FAG TFG W G LL WG VLL Y R PE LFLSTE LFLIA FF L L F LA 316
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 322 FSVALS LR AQEKGKQII DG V LLF AP PL IG F GM Q YGMTSHWT YG P ALSAL GYGAF YL S LALL AL RR Y P SI grp L IM A A LA I 401
Cdd:COG5373 317 IALLFA LR HPGPLRGPV DG T LLF GT PL VA F AL Q LALVADSG YG L ALSAL ALALL YL A LALL LR RR R P AL --- L AL A F LA L 393
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 402 G GG FATLAIPLALSARWTA MA WALEGLG I LWLG VQ Q QQRRMSYSGTA L LVLA L GSAIW A QMNGVTSL - S L L LIFAV L S L C 480
Cdd:COG5373 394 G VA FATLAIPLALSARWTA AL WALEGLG L LWLG LR Q WRLLLRWWALL L QLAP L AALLA A YWPVANLA g S Y L WALLA L A L A 473
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 481 W L A AA WLWQ k IVLSG S WA L LVG G LLF W LV A Q L G A SQ L I L KTE L SVL A GV LAL t A VSAWGWRQA A A RL A W RE L DASKW LL W 560
Cdd:COG5373 474 A L F AA LALR - LARRR S AG L RLW G AAW W AL A A L A A IA L A L TLL L EEA A LT LAL - A LLVLSLAWL A R RL D W PL L RWLAA LL L 551
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 561 P VM LL MV L YQVWQQQILA AG WAN L A ----- WAI AL P AA LMM LRR D edkllp R IAMG L HLSL LW MIL L AM A A EL YWFARSL 635
Cdd:COG5373 552 P LV LL RL L WDPGLVGGPL AG FNW L L wgygg PLL AL A AA AWL LRR R ------ R LRRW L EAAA LW LLV L LL A L EL RYLLWGG 625
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 636 PWGMAA W GSG ---- I A MAVGGGVIMA L SAAV RR R G WPF R VWPALYAC LA MIPVVVA L VV LL VVTNFQDG V V Y rqtw LPL V 711
Cdd:COG5373 626 DLFASE W SLA eagl L A LLWLALALAL L RRWL RR A G RVY R LAALALGP LA ALSYLLL L LL LL NPLWSGAP V G Y ---- LPL L 701
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 712 NPL EEGAAFAL L G L VVFY R avdrh YPASLAQS R PWP A VVLMA LGF W WLN GALL R ALAW y G EV A WN mes L WH S R L I Q TTFA 791
Cdd:COG5373 702 NPL LLAYLLPA L L L ALWA R ----- LLLLAPRL R RAA A GLAGL LGF L WLN LEIR R LWHG - G DL A LW --- L GV S D L E Q YSYS 772
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 550714329 792 LF W MFC AL VVMIRAT R QA SR QQW LAGA V LLG V V ML KL M LVD S AG G GGL A R AVA FIG VAI L V L IV GY FS P L PP KAG E EK 869
Cdd:COG5373 773 IV W LLL AL ALLLLGI R RG SR ALR LAGA A LLG L V VA KL F LVD M AG L GGL L R ILS FIG LGL L L L GI GY LY P R PP RRA E AE 850
DUF2339
pfam10101 Predicted membrane protein (DUF2339); This domain, found in various hypothetical bacterial ...
119-862
1.55e-77
Predicted membrane protein (DUF2339); This domain, found in various hypothetical bacterial proteins, has no known function.
Pssm-ID: 431054
Cd Length: 680
Bit Score: 265.76
E-value: 1.55e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 119 Q GN P L AK LG IVL L F LG LS FL LR Y TV E HS L FPL E L RLA AT ALF AMG LLA V G WR LR H R Q R - IY AL I LQGG ATG VLYLTV FG A 197
Cdd:pfam10101 1 G GN W L VW LG GLV L A LG GA FL VK Y AI E QG L LGP E V RLA LG ALF GLA LLA A G EW LR R R R R a GF AL A LQGG GLA VLYLTV YA A 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 198 FR L WQM LP MTL AFALL VVIC A AS V G LA V LQ KALS LA M L AS LGG Y LAPLL L STG G G SF VALF SFYL LL SIG IL VISIWQH W 277
Cdd:pfam10101 81 YA L YGL LP PGV AFALL ALVA A LA V A LA L LQ DGPA LA V L GL LGG F LAPLL V STG S G NP VALF GYLA LL NAA IL ALAWRRG W 160
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 278 R E LNLLG LLF TF GVGG v WG L SD Y Q P ENYVICQ LFL IANT L IF -------------------------------- GVFSVA 325
Cdd:pfam10101 161 R W LNLLG FAG TF AALW - GL L LY Y R P DGFASTE LFL LLFF L LY lallavgllafallaaallalawrreallala VLLALL 239
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 326 LSLRAQEKGKQII D GV L L F AP PL IG F GM QY GMTSHWT -- YG P ALSAL GYG A F YL S LA LLAL RR YPSIG R P L IM A A LA IGG 403
Cdd:pfam10101 240 FLALGFGRRRPPV D AT L V F GT PL AA F AL QY ALVGALD fd YG W ALSAL ALA A L YL A LA EWLA RR RRPRL R L L GE A F LA LAL 319
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 404 GF A TLAIPLALSA R WT AM AWALEG LGIL WL GVQQ Q Q RR MS ysgtallvlalgsaiwaqmngvtslsll LI F AVLS L CW LA 483
Cdd:pfam10101 320 GF L TLAIPLALSA A WT TL AWALEG AALA WL VGLR Q K RR LA ---------------------------- RR F GLPA L LF LA 371
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 484 A AW L WQKIV L SGSWA L LVGGLLF WL VAQ L gasqlilktelsvlagvlaltavsawgwrqaaarlawreldaskwllwpvm 563
Cdd:pfam10101 372 A SA L LLALL L RRLAL L PYLVGGG WL AWL L --------------------------------------------------- 400
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 564 llmvlyqvwqqqilaag W ANLAW A I AL PA A LMM LRR D ED K L lpri AMG LH LSL LW MI LL AM A A EL y WF A RSLPW G MAA W G 643
Cdd:pfam10101 401 ----------------- W GYGGP A A AL AL A ARL LRR R ED R L ---- RRW LH AAA LW LL LL LL A V EL - RY A LNGGL G AGG W P 458
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 644 S GIAM A VGGGVIM AL SAAVRR R GWPFRVWPA LY ACLAMI P VVVA L VVL L VVTNFQDGVVYRQT --- W LPL V NPL EEGA A F 720
Cdd:pfam10101 459 S LAEA A LPVLLWL AL ALLYLA R RRRRASLAR LY RGSGAL P LLAG L LGW L LLLVVLANPLWSGE avg G LPL L NPL DLAY A L 538
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 721 A L LG L VVFY R AVDRHY P ASLAQS R PWP AV VLM ALG FWWLNGALLRAL awyg E V A W NMES L WH S R L I Q ---- TTFALF W MF 796
Cdd:pfam10101 539 P L VL L LLWA R LLAGLR P LAPPLA R RAA AV LAA ALG ALFFVLLNAILI ---- R V P W QGAA L LL S D L V Q dael YSYSVV W LL 614
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 550714329 797 C A LVVMIRAT R QAS R QQW LAGA V LL GV V ML KL M L V D SA G G GGLAR A V A FIG VAI L V L IV GY FS P L P 862
Cdd:pfam10101 615 L A VALLLAGS R RGQ R RLR LAGA A LL AL V VA KL F L I D MS G L GGLAR I V S FIG LGL L L L GI GY LY P R P 680
Rib_recp_KP_reg
pfam05104 Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ...
44-105
1.41e-04
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.
Pssm-ID: 461548 [Multi-domain]
Cd Length: 140
Bit Score: 42.80
E-value: 1.41e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 550714329 44 I E ALEQHGVAEK A P EP VQTAA PV ET P APVPE A VNAPVDPWR P ------ E PPVTEA EPA PV P A A KR P SA 105
Cdd:pfam05104 64 R E FKTPDEAPSA A L EP EPVPT PV PA P VEPEP A PPSESPAPS P kekkkk E KKSAKV EPA ET P E A VQ P KP 131
PRK06549
PRK06549 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
47-98
6.15e-04
acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Validated
Pssm-ID: 235826 [Multi-domain]
Cd Length: 130
Bit Score: 40.57
E-value: 6.15e-04
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....*
gi 550714329 47 L E QH G VAEK A PE P V Q taa P VE TP A PVP EAVNAP V DPWR P E P PVT --- E A E P A P V P 98
Cdd:PRK06549 18 M E EI G APAQ A AA P A Q --- P AS TP V PVP TEASPQ V EAQA P Q P AAA aga D A M P S P M P 69
FimV
COG3170 Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];
31-124
1.41e-03
Type IV pilus assembly protein FimV [Cell motility, Extracellular structures];
Pssm-ID: 442403 [Multi-domain]
Cd Length: 508
Bit Score: 42.09
E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 31 T A ARQEI A R L RQ R IE ALE ------ Q HGV A E K A P E P - VQTA AP VETP A PVPEAVN AP VDPWR P EP pvteae P AP V PA AKR P 103
Cdd:COG3170 285 D A LPEAA A E L AE R LA ALE aqlael Q RLL A L K N P A P a AAVS AP AAAA A AATVEAA AP AAAAQ P AA ------ A AP A PA LDN P 358
90 100
....*....|....*....|.
gi 550714329 104 SAFG G I L SSLTRWFMQGN P L A 124
Cdd:COG3170 359 LLLA G L L RRRKAEADEVD P V A 379
PRK07764
PRK07764 DNA polymerase III subunits gamma and tau; Validated
32-105
1.68e-03
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain]
Cd Length: 824
Bit Score: 42.28
E-value: 1.68e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 550714329 32 A A RQEIAR L RQ R I E A LE QH - GVA EK A PE P VQT A AP ---- VETP AP V P E A VNAPVDPWRPEPPVTEAE PAP V PA AKR PS A 105
Cdd:PRK07764 366 S A SDDERG L LA R L E R LE RR l GVA GG A GA P AAA A PS aaaa APAA AP A P A A AAPAAAAAPAPAAAPQPA PAP A PA PAP PS P 444
PRK07764
PRK07764 DNA polymerase III subunits gamma and tau; Validated
29-108
6.23e-03
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain]
Cd Length: 824
Bit Score: 40.35
E-value: 6.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 29 RST AA RQEI A rlr QRIEALEQHGVAEKAPE ------ P VQT AAP VET PAP V P E A VNA P VDPWR P E PP VTE A EP A PVP A AKR 102
Cdd:PRK07764 423 PAP AA APQP A --- PAPAPAPAPPSPAGNAP aggaps P PPA AAP SAQ PAP A P A A APE P TAAPA P A PP AAP A PA A APA A PAA 499
....*.
gi 550714329 103 P S A FG G 108
Cdd:PRK07764 500 P A A PA G 505
PRK14965
PRK14965 DNA polymerase III subunits gamma and tau; Provisional
37-116
7.27e-03
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237871 [Multi-domain]
Cd Length: 576
Bit Score: 40.11
E-value: 7.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714329 37 IAR L RQ R I EALE Q ------- HGVAEKA P EPVQTAA P VET P a PVP E A VN A PVDPW RP E P PVTEAEP A PV PA AKRPS A FGG i 109
Cdd:PRK14965 367 VSE L LD R L EALE R gapapps AAWGAPT P AAPAAPP P AAA P - PVP P A AP A RPAAA RP A P APAPPAA A AP PA RSADP A AAA - 444
....*..
gi 550714329 110 l S SLT RW 116
Cdd:PRK14965 445 - S AGD RW 450
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
