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Conserved domains on  [gi|550714976|ref|WP_022647865|]
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MULTISPECIES: fimbrial protein [Enterobacter]

Protein Classification

fimbrial protein( domain architecture ID 10007530)

fimbrial protein similar to Escherichia coli fimbrial adapter PapF, which is required for the correct presentation of the PapG adhesin at the distal end of the tip fibrillum

Gene Ontology:  GO:0009289|GO:0007155
PubMed:  1670938|22411982|2890081

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-170 5.68e-27

Pilin (type 1 fimbrial protein) [Cell motility];


:

Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 99.73  E-value: 5.68e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976   1 MKIIYGTLLLLALLSGKAFTADSVNIGVTGNIVASPCIFNGGSNSLDVNLGNIQATNMATPGSTSDPVPFSLLFTQCPTG 80
Cdd:COG3539    1 MKKLLLALLLALALSAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  81 T-QSVTVSFTGSPDPAAGaDYFMN--SGSATHVAIAMRDAQTGTLKGTGSGMTQTIGADRTATMAMQASVKSVTGGVTPG 157
Cdd:COG3539   81 TsNSVKVTFTGTADSANP-GLLANtgSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATGATVTAG 159

                        170
                 ....*....|...
gi 550714976 158 SISAVVVMTMQYN 170
Cdd:COG3539  160 SFNATATFTIDYQ 172
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-170 5.68e-27

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 99.73  E-value: 5.68e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976   1 MKIIYGTLLLLALLSGKAFTADSVNIGVTGNIVASPCIFNGGSNSLDVNLGNIQATNMATPGSTSDPVPFSLLFTQCPTG 80
Cdd:COG3539    1 MKKLLLALLLALALSAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  81 T-QSVTVSFTGSPDPAAGaDYFMN--SGSATHVAIAMRDAQTGTLKGTGSGMTQTIGADRTATMAMQASVKSVTGGVTPG 157
Cdd:COG3539   81 TsNSVKVTFTGTADSANP-GLLANtgSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATGATVTAG 159

                        170
                 ....*....|...
gi 550714976 158 SISAVVVMTMQYN 170
Cdd:COG3539  160 SFNATATFTIDYQ 172
PRK09934 PRK09934
fimbriae assembly protein;
24-170 3.27e-18

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 77.24  E-value: 3.27e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  24 VNIGVTGNIVASPCIFNGGSNSLDVNLGNIQATNMATPGSTSDPVPFSLLFTQCPTGTQSVTvsFTGSPDPAAGADYFMN 103
Cdd:PRK09934  27 INIELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPPGSASIT--FTGTPASDTNLLALDD 104

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 550714976 104 SGSATHVAIAMRDAQTGTLKGTGSGMTQTIGADRTATMAMQASVKSVTGGVTPGSISAVVVMTMQYN 170
Cdd:PRK09934 105 PAMAQTVAIEIRDSDRSRLALGQASPTVEVDANGNATLNFYANYIALADGVQPGVAKADATFMINYN 171
Fimbrial pfam00419
Fimbrial protein;
24-170 8.88e-07

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 46.27  E-value: 8.88e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976   24 VNIGVTGNIVASPCIFNGGSNSLdVNLGNIQATNMATPGSTSDPVPFSLLFtQCPTGTQ--SVTVSFTGSPDpAAGADYF 101
Cdd:pfam00419   1 INFTGTVTRVPATCKITAGTPIE-VDFGQIPVNELNAGGEGSRQKPFSITL-ECSSGSSavKVTVGLFGTAD-ASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 550714976  102 MNS---GSATHVAIAMRDAQTGTLK--GTGSGMTQTIGADRTATMAMQASVKSVTGG-VTPGSISAVVVMTMQYN 170
Cdd:pfam00419  78 LTGngaGAATGVGIRLYDANGGALPpnNGTSSIPVSATAAVATGITFTASLVATTGGtPTAGDFNATATIVVDYQ 152
 
Name Accession Description Interval E-value
FimA COG3539
Pilin (type 1 fimbrial protein) [Cell motility];
1-170 5.68e-27

Pilin (type 1 fimbrial protein) [Cell motility];


Pssm-ID: 442760 [Multi-domain]  Cd Length: 172  Bit Score: 99.73  E-value: 5.68e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976   1 MKIIYGTLLLLALLSGKAFTADSVNIGVTGNIVASPCIFNGGSNSLDVNLGNIQATNMATPGSTSDPVPFSLLFTQCPTG 80
Cdd:COG3539    1 MKKLLLALLLALALSAAAAAAADGTVNFTGTVVAPTCTINTGSKDQTVDLGTVSTSDLNGVGSTSGPKPFSIKLTNCDAG 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  81 T-QSVTVSFTGSPDPAAGaDYFMN--SGSATHVAIAMRDAQTGTLKGTGSGMTQTIGADRTATMAMQASVKSVTGGVTPG 157
Cdd:COG3539   81 TsNSVKVTFTGTADSANP-GLLANtgSGGASGVGIQLLDSDGTPIPLGTPSSAVTLTSNGSATLPFYARYVATGATVTAG 159

                        170
                 ....*....|...
gi 550714976 158 SISAVVVMTMQYN 170
Cdd:COG3539  160 SFNATATFTIDYQ 172
PRK09934 PRK09934
fimbriae assembly protein;
24-170 3.27e-18

fimbriae assembly protein;


Pssm-ID: 182153 [Multi-domain]  Cd Length: 171  Bit Score: 77.24  E-value: 3.27e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  24 VNIGVTGNIVASPCIFNGGSNSLDVNLGNIQATNMATPGSTSDPVPFSLLFTQCPTGTQSVTvsFTGSPDPAAGADYFMN 103
Cdd:PRK09934  27 INIELHGNVVDFTCTVNTADSDKTVDLGTWPTKQLLNAGDTTQPVPFSLKLEGCPPGSASIT--FTGTPASDTNLLALDD 104

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 550714976 104 SGSATHVAIAMRDAQTGTLKGTGSGMTQTIGADRTATMAMQASVKSVTGGVTPGSISAVVVMTMQYN 170
Cdd:PRK09934 105 PAMAQTVAIEIRDSDRSRLALGQASPTVEVDANGNATLNFYANYIALADGVQPGVAKADATFMINYN 171
PRK15210 PRK15210
fimbrial protein;
3-169 1.46e-10

fimbrial protein;


Pssm-ID: 185132  Cd Length: 194  Bit Score: 57.40  E-value: 1.46e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976   3 IIYGTLLLLALLSGKAFTADSVNIGVTGNIVASPCIFNGGSNSLDVNLGNIQATNMATPGSTSDPVPFSLLFTQC----- 77
Cdd:PRK15210  14 MMYGASVFAADTTPTAGPFGSGKILFTGTITNSPCDIAPGDDAITVPFGQISYRKLNTADATTESKPFTIHLQNCafdpn 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  78 ------PTGTQS-VTVSFTGSPDPAAGAdyFMNSGSATHVAIAMRDAQTGTLKGTGSGMTQTIGADRTA---TMAMQASV 147
Cdd:PRK15210  94 ipdtagSAGKMSkVTVSFSGTANTSKKA--YTTSGSAQHVGVQLLKSDNTSIIEPNTPMPDGDAQQLQAgnnELNFFARL 171

                        170       180
                 ....*....|....*....|..
gi 550714976 148 KSVTGGVTPGSISAVVVMTMQY 169
Cdd:PRK15210 172 IALDNGVTPGDFNASVTYTLKY 193
PRK15293 PRK15293
fimbrial protein SthD;
6-169 3.45e-10

fimbrial protein SthD;


Pssm-ID: 185193  Cd Length: 185  Bit Score: 56.22  E-value: 3.45e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976   6 GTLLLLALLSGKAFTADSVNIGVTGNIVASPCIFNGGSNsldVNLGNIQATNMATPGSTSDPVPFSLLFTQCPTGTQSVT 85
Cdd:PRK15293  17 GLALWSPSISAAYNTADAVDINVTGLIYADPCTVTVPDT---LSLGQYARADIAVAGGNTATIPFTIKMTNCPATTTKAA 93

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  86 VSFTGSP--DPAAGADYFMNSGS--ATHVAIAMRDAQTGTLKGTGSGMTQT--IGAD-RTATMAMQASVKSVTGGVTPGS 158
Cdd:PRK15293  94 ISFNGVPypDPNYASAIYANSAAnpAQDLGLQLFNLDGKSLVNLANNVTYTvdINSNtHEANLPVAARMYTPYGKVTAGD 173

                        170
                 ....*....|.
gi 550714976 159 ISAVVVMTMQY 169
Cdd:PRK15293 174 FTSVVTITIAW 184
PRK15190 PRK15190
fimbrial protein BcfE; Provisional
 25-169 7.28e-08

fimbrial protein BcfE; Provisional


Pssm-ID: 185112  Cd Length: 181  Bit Score: 49.70  E-value: 7.28e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  25 NIGVTGNIVASPCIFNGGSNSLDVNLGNIQATNMATPGSTSDPVPFSLLFTQCPTGTQSVTVSFTGSPDP-----AAGAD 99
Cdd:PRK15190  29 NLEFTGTIVAQTCDIDISSLSQSIDLGQFAVGDFPSTGTTTKFKPFNINLKNCSRGIAGAKIWFTGEPDPdnpalLAITD 108

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 550714976 100 YFMNSG----SATHVAIAMRDAQTGTLKGTGSgMTQTIGADRTaTMAMQASVKSVTGGVTPGSISAVVVMTMQY 169
Cdd:PRK15190 109 TGMGSGnmlaSGVGVEILNDDQDTISINNADS-VVYPLKAGRN-TLSFYIRYKSTRPTVTSGNATAVMYFDMQY 180
PRK15209 PRK15209
long polar fimbrial protein LpfA; Provisional
 1-170 1.27e-07

long polar fimbrial protein LpfA; Provisional


Pssm-ID: 185131 [Multi-domain]  Cd Length: 174  Bit Score: 48.81  E-value: 1.27e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976   1 MKIIYGTLLLLALLSGKAFTADSVN--IGVTGNIVASPCIFNGGSNSLDVNLGNIQATNMATPGSTSDPVPFSLLFTQCP 78
Cdd:PRK15209   1 MKKVVFALSALALTSTSVFAAESGDgtVKFTGEIVDAPCVVSTDSQNQEVVLGQVKKSVFKAIGDKSSAKPFQIKLEDCD 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  79 TGT-QSVTVSFT--GSPDPAAGADYFMNSGSATHVAIAMRDaQTGTLKGTGSGMTQTIGADRTATMAMQASVKSVTGGVT 155
Cdd:PRK15209  81 ITTnKKVNVSFNgvGDADDSTLVSVSTEAGAATGVGIGIYD-NANTLVELNTGKSTTTLAAGQTVLYFTANYVSTKDTVT 159

                        170
                 ....*....|....*
gi 550714976 156 PGSISAVVVMTMQYN 170
Cdd:PRK15209 160 TGYGNAEVDFNLSYE 174
Fimbrial pfam00419
Fimbrial protein;
24-170 8.88e-07

Fimbrial protein;


Pssm-ID: 425671  Cd Length: 152  Bit Score: 46.27  E-value: 8.88e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976   24 VNIGVTGNIVASPCIFNGGSNSLdVNLGNIQATNMATPGSTSDPVPFSLLFtQCPTGTQ--SVTVSFTGSPDpAAGADYF 101
Cdd:pfam00419   1 INFTGTVTRVPATCKITAGTPIE-VDFGQIPVNELNAGGEGSRQKPFSITL-ECSSGSSavKVTVGLFGTAD-ASSPNLL 77

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 550714976  102 MNS---GSATHVAIAMRDAQTGTLK--GTGSGMTQTIGADRTATMAMQASVKSVTGG-VTPGSISAVVVMTMQYN 170
Cdd:pfam00419  78 LTGngaGAATGVGIRLYDANGGALPpnNGTSSIPVSATAAVATGITFTASLVATTGGtPTAGDFNATATIVVDYQ 152
PRK15205 PRK15205
long polar fimbrial protein LpfE; Provisional
 21-169 9.09e-06

long polar fimbrial protein LpfE; Provisional


Pssm-ID: 237923  Cd Length: 176  Bit Score: 43.69  E-value: 9.09e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  21 ADSVNIGVTGNIVASPCIFNGG----SNSLDVNLGNIQATNMATPGSTSDPVPFSLLFTQCpTGTQSVTVSFTGSPDPAA 96
Cdd:PRK15205  21 AAPTDLGPAGDIHFTITIKAKAceleKDSLEVDMGTMVLQKPVKVGTELNQKNFSIGLKDC-DGISKASVTMDGSPDPDD 99

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 550714976  97 GADYFMNSGSATHVAIAMRDA---QTGTLKGTGSGMTQTIGADRTATMAMQASVKSVTGGVTPGSISAVVVMTMQY 169
Cdd:PRK15205 100 PSLFALDAGGATGVALKIKTSkgtQQYPKSTDGTPVEWAINGDGTTQLNYIASYVPVNADATVGTANATVNFSVTY 175
PRK15194 PRK15194
type 1 fimbrial protein subunit FimA;
1-169 1.50e-05

type 1 fimbrial protein subunit FimA;


Pssm-ID: 237920  Cd Length: 185  Bit Score: 43.40  E-value: 1.50e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976   1 MKIIYGTLLLLALLSGKAFTADSVNIGVTG-------NIVASPCIFNGGSNSLDVNLGNIQATNMATPGSTSDPVPFSLL 73
Cdd:PRK15194   3 LRFISSAIASLLFVAGAAYAADPTPVSVDGgtihfegELVNAACSVNTDSADQTVTLGQYRTAIFTAVGNTTALIPFTIQ 82

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  74 FTQC-PTGTQSVTVSFTGSPDPA-------AGADyfmNSGSATHVAIAMRDAQTGTLKGTGSGMTQTIG-ADRTATMAMQ 144
Cdd:PRK15194  83 LNDCdPVVAATAAVAFSGQADATndnllavASST---NTTTATGVGIEILDNTSSILKPDGATFSANQNlIEGTNTLHFS 159

                        170       180
                 ....*....|....*....|....*
gi 550714976 145 ASVKSVTGGVTPGSISAVVVMTMQY 169
Cdd:PRK15194 160 ARYKATGTSASAGQANADATFIMKY 184
lpfA PRK15289
fimbrial protein; Provisional
 15-169 1.72e-05

fimbrial protein; Provisional


Pssm-ID: 185189  Cd Length: 190  Bit Score: 43.02  E-value: 1.72e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  15 SGKAFTADSVnIGVTGNIVASPCIFNGGSNSLDVNLGNIQATNMATPGSTSDPVPFSLLFTQCPTGTQSVTVSFTGSPDP 94
Cdd:PRK15289  18 AGHALAEDGV-VHFVGEIVDTTCEVTSDTADQIVPLGKVSKNAFSGVGSLASPQKFSIKLENCPATYTQAAVRFDGTEAP 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  95 AAGADYFM-------NSG---------SATHVAIAMRD-AQTGTLKGTGSGMTQTIGADRTATMAMQASVKSVTGGVTPG 157
Cdd:PRK15289  97 GGDGDLKVgtpltagNPGdftgtgqaiAATGVGIRIFNqSDNSQVKLYNDSAYTAIDAEGKAEMKFIARYVATNATVTAG 176

                        170
                 ....*....|..
gi 550714976 158 SISAVVVMTMQY 169
Cdd:PRK15289 177 TANADSQFTVEY 188
PRK15296 PRK15296
fimbrial protein SthA;
42-169 1.30e-03

fimbrial protein SthA;


Pssm-ID: 185196  Cd Length: 181  Bit Score: 37.76  E-value: 1.30e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  42 GSNSLDVNLGNIQATNMATPGSTSDPVPFSLLFTQCPTGTQSV----TVSFTGSPDpAAGADYFMNSG-----SATHVAI 112
Cdd:PRK15296  43 GSTDTTIDLGNYSKERIAEKGATTDYVPFTVSLVSCPEAGTGVptqaMFRFHGATD-DSNPTYFKNADegsetGAAGVGI 121

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 550714976 113 AMRDAQTGTLKGTGSGMTQTIGAD-RTATMAMQAS-VKSVTGGVTPGSISAVVVMTMQY 169
Cdd:PRK15296 122 SIQNASHSDVTDNTDDAAVNLPTDgSTADFTYYAAmANDGSATVTGGDVSTQVTYTVSY 180
PRK15260 PRK15260
fimbrial protein SteF; Provisional
 21-169 1.36e-03

fimbrial protein SteF; Provisional


Pssm-ID: 185168  Cd Length: 178  Bit Score: 37.75  E-value: 1.36e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  21 ADSVNIGVTGNIVASPCIFNGGSNSL-DVNLGNIQATNMATPGSTSdPVPFSLLFTQCPTG-TQSVTVSFTGSPDPA-AG 97
Cdd:PRK15260  26 AATPNVHYSGKLVAGACNLVVDNDTMaTVDFHTIGSDNFDASGQTT-PVPFTLSLQDCKTAlANGVLVTFQGVEDSTlPG 104

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 550714976  98 ADYFMNSGSATHVAIAMRDAQTGTLKGTGSGMTQTIGADRTATMAMQASVKSVTG-GVTPGSISAVVVMTMQY 169
Cdd:PRK15260 105 LLALEPSSEASGFAIGVETAAQQPVSINATVGTAFVLKEGITTINLQARLQKYAGeEVMPGEFSGSATVSFEY 177
PRK09733 PRK09733
fimbrial-like protein;
15-169 5.80e-03

fimbrial-like protein;


Pssm-ID: 182053  Cd Length: 181  Bit Score: 35.70  E-value: 5.80e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  15 SGKAFTAD-SVNIGVTGNIVASPCIFNGGSNSLDVNLGNIqATNMATPGSTSDPVPFSL-----LFTQCPTGTQSVTVSF 88
Cdd:PRK09733  16 SNNVFADEgHGIVKFKGEVISAPCSIKPGDEDLTVNLGEV-ADTVLKSDQKSLAEPFTIhlqdcMLSQGGTTYSKAKVTF 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  89 TGSPDPAAGADYFMNS-----GSATHVAIAMRDAQTGTLKgTGSGMTQTIGADRT-ATMAMQASVKSVTGGVTPGSISAV 162
Cdd:PRK09733  95 TTANTMTGQSDLLKNTketeiGGATGVGVRILDSQSGEVT-LGTPVVITFNNTNSyQELNFKARMESPSKDATPGNVYAQ 173


                 ....*..
gi 550714976 163 VVMTMQY 169
Cdd:PRK09733 174 ADYKIAY 180
PRK15191 PRK15191
fimbrial protein BcfF; Provisional
 15-169 6.77e-03

fimbrial protein BcfF; Provisional


Pssm-ID: 185113 [Multi-domain]  Cd Length: 172  Bit Score: 35.46  E-value: 6.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550714976  15 SGKAFTADSVNIGVTGNIVASPCIFNGGSNSLDVNLGNIQATNMATPGSTSDPVPFSLLFTQCPTGTQSVTVSFTGSPDP 94
Cdd:PRK15191  14 AASGVQAHDGRVYVSGTITDNTCSLSPGSENINVAMGAVSQRQFYRAGDGSAWQPFAIDLQNCGSTASGVTVSFSGAADS 93

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 550714976  95 AAGADYFMNSGS--ATHVAIAMRDAQTGTLK-GTGSGMTQTIGADRTATMAMQASVKSVTGGVTPGSISAVVVMTMQY 169
Cdd:PRK15191  94 RNTDLLALTAGEsdASGIGIALYDQNKTLIPlGQESDVVTLSPGQASAHLQFYARYLADGGAVTPGDANASATFILAY 171
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
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