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Conserved domains on  [gi|550766465|ref|WP_022649825|]
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MULTISPECIES: molecular chaperone [Enterobacter]

Protein Classification

molecular chaperone( domain architecture ID 11459711)

molecular chaperone belonging to the periplasmic pilus chaperone family may be involved in fimbrial biogenesis; similar to Escherichia coli fimbrial chaperones, YraI, YqiH, YbgP and ElfD

CATH:  2.60.40.10
Gene Ontology:  GO:0061077|GO:0030288|GO:0043711
PubMed:  1683764|8670884
SCOP:  4002248|4007561

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-233 1.81e-72

P pilus assembly protein, chaperone PapD [Extracellular structures];


:

Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 220.63  E-value: 1.81e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   1 MMRISLLLLWMLVSWPCA-AGIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDINREPGSVKTPFVAVPPLFR 79
Cdd:COG3121    4 LLRLLLLALLLLLASAAAaAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFR 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  80 LEPKGVQGLRIMHNKARMPTDRESAFWLNIYEIPPTGSVATQQQSMVLTMNTQMKIFWRPASLN-NPESAWARLTFHREG 158
Cdd:COG3121   84 LEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKgSPEDAAEKLTWSLVG 163

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 550766465 159 SVLVCHNDSPYFVSFAGINFKAGEKLYPVtqlPDMMVAPFGEKRYAFAANAPFS--GQVQGELIDDNGNSAVYNWPV 233
Cdd:COG3121  164 NGLTVTNPGPYYVTLSDLSLGAGGKKLKK---GLGMVLPGSTRRWPLPAGASLAagGKVTWATINDYGGAVPLEATL 237
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-233 1.81e-72

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 220.63  E-value: 1.81e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   1 MMRISLLLLWMLVSWPCA-AGIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDINREPGSVKTPFVAVPPLFR 79
Cdd:COG3121    4 LLRLLLLALLLLLASAAAaAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFR 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  80 LEPKGVQGLRIMHNKARMPTDRESAFWLNIYEIPPTGSVATQQQSMVLTMNTQMKIFWRPASLN-NPESAWARLTFHREG 158
Cdd:COG3121   84 LEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKgSPEDAAEKLTWSLVG 163

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 550766465 159 SVLVCHNDSPYFVSFAGINFKAGEKLYPVtqlPDMMVAPFGEKRYAFAANAPFS--GQVQGELIDDNGNSAVYNWPV 233
Cdd:COG3121  164 NGLTVTNPGPYYVTLSDLSLGAGGKKLKK---GLGMVLPGSTRRWPLPAGASLAagGKVTWATINDYGGAVPLEATL 237
PRK09926 PRK09926
fimbrial chaperone;
11-224 1.08e-53

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 172.98  E-value: 1.08e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  11 MLVSWPCAAGIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDINREPGSVKTPFVAVPPLFRLEPKGVQGLRI 90
Cdd:PRK09926  17 MAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTATPPVSRIDPKRGQTIKL 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  91 MHNKAR-MPTDRESAFWLNIYEIPP--TGSVATQQQSMVLTMNTQMKIFWRPASLN-NPESAWARLTF---HREG-SVLV 162
Cdd:PRK09926  97 MYTASTaLPKDRESVFWFNVLEVPPkpDAEKVANQSLLQLAFRTRIKLFYRPDGLKgNPSEAPLALKWswaGSEGkASLR 176

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 550766465 163 CHNDSPYFVSFAGINFKAGEKLYPVtqlpDM-MVAPFGEKRYAF--AANAPFSGQVQGELIDDNG 224
Cdd:PRK09926 177 VTNPTPYYVSFSSGDLEAGGKRYPV----DSkMIAPFSDESMKVkgLSGKASSGKVHFYAINDFG 237
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 21-142 1.50e-49

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 158.14  E-value: 1.50e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   21 IIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDINREPGSVKTPFVAVPPLFRLEPKGVQGLRIMHNKARMPTD 100
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 550766465  101 RESAFWLNIYEIPPTGSVATQQQSMVLTMNTQMKIFWRPASL 142
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGL 122
 
Name Accession Description Interval E-value
FimC COG3121
P pilus assembly protein, chaperone PapD [Extracellular structures];
1-233 1.81e-72

P pilus assembly protein, chaperone PapD [Extracellular structures];


Pssm-ID: 442355 [Multi-domain]  Cd Length: 237  Bit Score: 220.63  E-value: 1.81e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   1 MMRISLLLLWMLVSWPCA-AGIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDINREPGSVKTPFVAVPPLFR 79
Cdd:COG3121    4 LLRLLLLALLLLLASAAAaAGISISPTRVIYPAGDKEASLTLTNTGDTPYLVQSWVDDWDQDAGPDKATAPFVVTPPLFR 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  80 LEPKGVQGLRIMHNKARMPTDRESAFWLNIYEIPPTGSVATQQQSMVLTMNTQMKIFWRPASLN-NPESAWARLTFHREG 158
Cdd:COG3121   84 LEPGKSQTVRIIRTGPPLPQDRESLFRLNVDEIPPKDASEEGKNTLQIALRTRIKLFYRPAGLKgSPEDAAEKLTWSLVG 163

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 550766465 159 SVLVCHNDSPYFVSFAGINFKAGEKLYPVtqlPDMMVAPFGEKRYAFAANAPFS--GQVQGELIDDNGNSAVYNWPV 233
Cdd:COG3121  164 NGLTVTNPGPYYVTLSDLSLGAGGKKLKK---GLGMVLPGSTRRWPLPAGASLAagGKVTWATINDYGGAVPLEATL 237
PRK09926 PRK09926
fimbrial chaperone;
11-224 1.08e-53

fimbrial chaperone;


Pssm-ID: 236634 [Multi-domain]  Cd Length: 246  Bit Score: 172.98  E-value: 1.08e-53
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  11 MLVSWPCAAGIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDINREPGSVKTPFVAVPPLFRLEPKGVQGLRI 90
Cdd:PRK09926  17 MAFSSSSIADIVISGTRIIYKSDQKDVNVRLENKGNNPLLVQSWLDTGDDNAEPGSIKVPFTATPPVSRIDPKRGQTIKL 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  91 MHNKAR-MPTDRESAFWLNIYEIPP--TGSVATQQQSMVLTMNTQMKIFWRPASLN-NPESAWARLTF---HREG-SVLV 162
Cdd:PRK09926  97 MYTASTaLPKDRESVFWFNVLEVPPkpDAEKVANQSLLQLAFRTRIKLFYRPDGLKgNPSEAPLALKWswaGSEGkASLR 176

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 550766465 163 CHNDSPYFVSFAGINFKAGEKLYPVtqlpDM-MVAPFGEKRYAF--AANAPFSGQVQGELIDDNG 224
Cdd:PRK09926 177 VTNPTPYYVSFSSGDLEAGGKRYPV----DSkMIAPFSDESMKVkgLSGKASSGKVHFYAINDFG 237
PapD_N pfam00345
Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich ...
 21-142 1.50e-49

Pili and flagellar-assembly chaperone, PapD N-terminal domain; C2 domain-like beta-sandwich fold. This domain is the n-terminal part of the PapD chaperone protein for pilus and flagellar assembly.


Pssm-ID: 425623  Cd Length: 123  Bit Score: 158.14  E-value: 1.50e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   21 IIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDINREPGSVKTPFVAVPPLFRLEPKGVQGLRIMHNKARMPTD 100
Cdd:pfam00345   1 VVLGGTRVIYPAGEKEASVTVSNTGDNPYLVQSWVDDGNEEGTDEKAKAPFIVTPPLFRLEPGQEQVLRIYTTGPPLPTD 80

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 550766465  101 RESAFWLNIYEIPPTGSVATQQQSMVLTMNTQMKIFWRPASL 142
Cdd:pfam00345  81 RESLFWLNVLEIPPKDKPKGGQNGLQLALRSRIKLFYRPAGL 122
PRK15249 PRK15249
fimbrial chaperone;
6-233 3.88e-43

fimbrial chaperone;


Pssm-ID: 237930 [Multi-domain]  Cd Length: 253  Bit Score: 146.10  E-value: 3.88e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   6 LLLLWMLVSWpcaAGIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDINREP-GSVKTPFVAVPPLFRLEPKG 84
Cdd:PRK15249  18 FLALPATASW---ASVTILGSRIIYPSTASSVDVQLKNNDAIPYIVQTWFDDGDMNTSPeNSSAMPFIATPPVFRIQPKA 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  85 VQGLRIMHNKAR-MPTDRESAFWLNIYEIPPTGSVATQQQSMVLTM-NTQMKIFWRPASLNNPESAWARLTF-----HRE 157
Cdd:PRK15249  95 GQVVRVIYNNTKkLPQDRESVFWFNVLQVPPTNIGSDSGQNKMLVMlRSRIKLFYRPDGLGKPDNLAKKLQIktvnkGSG 174

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 550766465 158 GSVLVCHNDSPYFVSFAGINFKAGEKlyPVTQLPDmMVAPFGEKRYAFAAN---APFSGQVQGELIDDNGNSAVYNWPV 233
Cdd:PRK15249 175 KSGIVIVNPQPWFASLSNLNVKVNGA--SYNLDAD-MIAPFSSQTWWLPGKrslKSFSGTVTVTLVNDQGARISESYDV 250
PRK15246 PRK15246
fimbrial assembly chaperone;
26-229 5.05e-41

fimbrial assembly chaperone;


Pssm-ID: 185158 [Multi-domain]  Cd Length: 233  Bit Score: 140.10  E-value: 5.05e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  26 TRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDINREPGSVKTPFVAVPPLFRLEPKGVQGLRIMHNKAR-MPTDRESA 104
Cdd:PRK15246  17 TRIIFASDDVAQSLTLSNDNTTPMLLQVWTDAGNIDASPDNSKTPLVALPPVFKMQPGELRTLRLLLSSRQqLATDRESL 96

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465 105 FWLNIYEIPP-TGSVATQQQSMVLTMNTQMKIFWRPASLNNPESAWAR-LTFHREGSVLVCHNDSPYFVSFAGINFKAge 182
Cdd:PRK15246  97 FWLNIYQIPPvTQDIKNHPRKLVLPLRLRLKILIRPTGLKAPTEAEEKkLRFIAKENTIRIVNPTSWYMSLTLTMDNK-- 174

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*..
gi 550766465 183 klypvTQLPDMMVAPFGEKRYAFAANAPFSGQVQGELIDDNGNSAVY 229
Cdd:PRK15246 175 -----KSIGDIMVAPKTALDVPLTRSPTPGASINYAVINDSGNWRQY 216
lfpB PRK15290
fimbrial chaperone;
19-234 1.26e-36

fimbrial chaperone;


Pssm-ID: 237934 [Multi-domain]  Cd Length: 243  Bit Score: 128.95  E-value: 1.26e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  19 AGIIASATRVIFHEGEAQQSLMLVNTN-PWPVVVQTWVDDgdINREPGSvKTPFVAVPPLFRLEPKGVQGLRIMHNKA-R 96
Cdd:PRK15290  37 AGVVIGGTRVVYLSNNPDKSISVFSKEeKIPYLIQAWVDP--FNKEDKS-KAPFTVIPPVSRLEPSQEKVLRIIHTKGvS 113

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  97 MPTDRESAFWLNIYEIPPTGSvATQQQSMVLTMNTQMKIFWRPASLN-NPESAWARLTFHREGSVLVCHNDSPYFVSFAG 175
Cdd:PRK15290 114 LPDDRESVFWLNIKNIPPSAS-NKATNSLEIAVKTRIKLFWRPASIRlIPEDAAPKVKWRREGRNLIAENPNPIHISVMD 192

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 550766465 176 INFKAGEklypvtqLPDMMVAPFGEKRYAFAANAPfSGQVQGELIDDNGnsAVYNwPVK 234
Cdd:PRK15290 193 VIVDGHD-------VPLNMIRPFETLTLPLPANSA-GGQMTWRFINDYG--AVSD-PIK 240
PRK15299 PRK15299
fimbrial chaperone protein StiB; Provisional
 1-227 8.80e-34

fimbrial chaperone protein StiB; Provisional


Pssm-ID: 185199 [Multi-domain]  Cd Length: 227  Bit Score: 121.04  E-value: 8.80e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   1 MMRISLLLLWMLVSWPCAAGIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDgdINREPGSVKTPFVAVPPLFRL 80
Cdd:PRK15299   4 LAKAGLLCCLLCGSLAHAAGINIGTTRVIFHGDAKDASISISNSDNVPYLIQSWAQS--ISETGASGDAPFMVTPPLFRL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  81 EPKGVQGLRIMHNKARMPTDRESAFWLNIYEIpPTGSVATQQQSMVLTMNTQMKIFWRPASLNN-PESAWARLTFHREGS 159
Cdd:PRK15299  82 NGGQKNVLRIIRTGGNLPEDRESLYWLDIKSI-PSSNPDNKHNTLMLAVKAEFKLIYRPKALTQkPEEVADRLTWSRQGR 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 550766465 160 VLVCHNDSPYFVSFAGINFKAGEKLYPvtqlpdMMVAPFGEKRYAFAANApfSGQVQGELIDDNGNSA 227
Cdd:PRK15299 161 TLTVKNPTPYYMNFATLSVGSQKVKAP------RYVAPFGNAQYTLPAAA--SGPIAWSIINDFGGTG 220
PRK15208 PRK15208
molecular chaperone LpfB;
1-229 7.44e-33

molecular chaperone LpfB;


Pssm-ID: 237925 [Multi-domain]  Cd Length: 228  Bit Score: 118.86  E-value: 7.44e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   1 MMRISL-LLLWMLVSWPCAAGIIA-SATRVIFHEGEAQQSLMLVNTNPW-PVVVQTWVDDGDinrepGSVKTPFVAVPPL 77
Cdd:PRK15208   1 MRLISFtALALALIAQNSFAGGVAlSSTRVIYDGSKKEASLTVNNKSKTeEFLIQSWIDDAN-----GNKKTPFIITPPL 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  78 FRLEPKGVQGLRIMHNKARMPTDRESAFWLNIYEIPPTGSVATQQQSMVLTMNTQMKIFWRPASL-NNPESAWARLTFHR 156
Cdd:PRK15208  76 FKLDPTKNNVLRIVNITNTLPQDRESVYWINVKAIPAKSEDAENKNVLQIAVRTRLKLFYRPAGLkGNSMDAWNKLRFTR 155

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 550766465 157 EGSVLVCHNDSPYFVSFAG--INFKAGEKlypvtqlpDMMVAPFGEKRYAFAANAPFSGQVQGELIDDNGNSAVY 229
Cdd:PRK15208 156 AGNQIKVENPSAFNLTFNQfyANGRDIEK--------AGMVPAKGSLNIELPAGTGKVSEVKYNIINDFGTAGEM 222
PRK15253 PRK15253
putative fimbrial assembly chaperone protein StcB; Provisional
 1-234 5.38e-32

putative fimbrial assembly chaperone protein StcB; Provisional


Pssm-ID: 185165 [Multi-domain]  Cd Length: 242  Bit Score: 117.07  E-value: 5.38e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   1 MMRISLLLLWMLVsWPCAAGIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDINREPGSVKTPFVAVPPLFRL 80
Cdd:PRK15253  16 MKILSAVLLSAII-LPAHAGIVIYGTRVIYPAEKKEVVVQLVNQGEQASLVQSWIDDGNTSLPPEKIQVPFMLTPPVARV 94

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  81 EPKGVQGLRIMHNKARMPTDRESAFWLNIYEIPPTGSVATQQQSMVLTMNTQMKIFWRPASLNN-PESAWARLTFHREGS 159
Cdd:PRK15253  95 AAESGQQIKIKKMPNSLPDNKESLFYLNVLDIPPNSQENAGKNVLKFAMQNRIKLIWRPSRIAAvTKDSFQRIGLFRSNK 174

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 550766465 160 VLVCHNDSPYFVSFAGInfKAGEklypvTQLPD--MMVAPFGEKRYAFAANApfSGQVQGELIDDNGNSAVYNWPVK 234
Cdd:PRK15253 175 TVIMKNDTANWITVTDV--KAGN-----TKINDqtIMLPPLSTQNINMKYAS--TSQYEVTIIDDNGNYISSKINVK 242
PRK15195 PRK15195
molecular chaperone FimC;
4-224 7.70e-31

molecular chaperone FimC;


Pssm-ID: 185117 [Multi-domain]  Cd Length: 229  Bit Score: 113.42  E-value: 7.70e-31
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   4 ISLLLLWMLVSWPCAAGIIASATRVIFHEGEAQQSLMLVNTNPWP-VVVQTWVDDGDINREpgsvKTpFVAVPPLFRLEP 82
Cdd:PRK15195  10 IIIFYLIISASVHAAGGIALGATRVIYPADAKQTSLAIRNSHTNErYLVNSWIENSSGVKE----KS-FIVTPPLFVSEP 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  83 KGVQGLRIMHNKARMPTDRESAFWLNIYEIPPTGSVATQQQSMV-LTMNTQMKIFWRPASL-NNPESAWARLTFHREGSV 160
Cdd:PRK15195  85 KSENTLRIIYAGPPLAADRESLFWMNVKAIPSVDKNALEGRNVLqLAILSRIKLFVRPINLqELPEEAPDTLKFSRSGNH 164

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 550766465 161 LVCHNDSPYFVSFagINFKAGEKlypvtQLPDMMVAPFGEKRYAFAANApfSGQVQGELIDDNG 224
Cdd:PRK15195 165 LKVHNPSPYYVTL--VNLQVGSQ-----KLGNAMIAPKVNSQIPLPSGV--QGKLKFQTVNDYG 219
PRK15295 PRK15295
fimbrial assembly chaperone;
2-226 1.96e-29

fimbrial assembly chaperone;


Pssm-ID: 237936 [Multi-domain]  Cd Length: 226  Bit Score: 109.65  E-value: 1.96e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   2 MRISLLLLWMLVSWPCA-AGIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDINrepGSVKTPFVAVPPLFRL 80
Cdd:PRK15295   1 KHIKKSVLVVLLTSHVAhASIVVGGTRLVFDGNNDESSINVENKDSKANLVQSWLSVVDPQ---VTNKQAFIITPPLFRL 77

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  81 EPKGVQGLRIMHNKARMPTDRESAFWLNIYEIPPTGSVATQQQsMVLTMNTQMKIFWRPASL--NNPESAWARLTFHREG 158
Cdd:PRK15295  78 DAGQKNSIRVIRSGAPLPADRESMYWLNIKGIPSIDDNASANR-VEISINTQIKLIYRPPALtkSTPDSQSQQLKWQTAG 156

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 550766465 159 SVLVCHNDSPYFVSFAGINFKaGEKLYPVTqlpdmMVAPFGEKRYAFAANAPFSGQVQGELIDDNGNS 226
Cdd:PRK15295 157 DVITVNNPTPYYMNFASVTLN-SHEVKSAT-----FVPPKSSASFKLGSTAAPHGTVTWRLISDYGMS 218
PRK15188 PRK15188
fimbrial chaperone protein BcfB; Provisional
 2-224 6.92e-28

fimbrial chaperone protein BcfB; Provisional


Pssm-ID: 185110 [Multi-domain]  Cd Length: 228  Bit Score: 106.00  E-value: 6.92e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   2 MRISLLLLWMLVSWPCAAGIIA-SATRVIFHEGEAQQSLMLVNTNPWPV-VVQTWVDDGDinrepGSVKTPFVAVPPLFR 79
Cdd:PRK15188   9 LRLLLLLSAAGLSFAAQAGGIAlGATRVIYPQGSKQTSLPIINSSASNVfLIQSWVANAD-----GSRSTDFIITPPLFV 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  80 LEPKGVQGLRIMHNKARMPTDRESAFWLNIYEIPPTGSVATQQQSMVLTMNTQMKIFWRPASL-NNPESAWARLTFHREG 158
Cdd:PRK15188  84 IQPKKENILRIMYVGPSLPTDRESVFYLNSKAIPSVDKNKLTGNSLQIATQSVIKLFIRPKNLaEAPAHAPSTLRCRNER 163

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 550766465 159 SVLVCHNDSPYFVSFAGInFKAGEKlypvtqLPDMMVAPFGekryafAANAPFS-GQVQGELIDDNG 224
Cdd:PRK15188 164 GQLTITNPSPYYVSMVEL-YSAGKK------LPNTMVPPKG------AITLPATpGQVSLRTVNDFG 217
PRK15211 PRK15211
fimbrial chaperone;
7-179 2.50e-27

fimbrial chaperone;


Pssm-ID: 185133 [Multi-domain]  Cd Length: 229  Bit Score: 104.52  E-value: 2.50e-27
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   7 LLLWMLVSWPCAAGIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDdgdiNREPGSVKTPFVAVPPLFRLEPKGVQ 86
Cdd:PRK15211  10 SLLSLAVCGQAMAAFVLNGTRFIYDEGRKNISFEVTNQADQTYGGQVWID----NTTQGSSTVYMVPAPPFFKVRPKEKQ 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  87 GLRIMHNKARMPTDRESAFWLNIYEIPPTGSvATQQQSMVLTMNTQMKIFWRPASL-NNPESAWARLTFHREGSVLVCHN 165
Cdd:PRK15211  86 IIRIMKTDSALPKDRESLFWLNVQEIPPKPK-ASEGNVLAVALNTQVKLIYRPKALkEGRENAEKNLQIIHRGGETYLKN 164

                        170
                 ....*....|....
gi 550766465 166 DSPYFvsFAGINFK 179
Cdd:PRK15211 165 PTPYY--FAVTGVK 176
PRK15218 PRK15218
fimbrial assembly chaperone;
2-225 1.33e-24

fimbrial assembly chaperone;


Pssm-ID: 185140 [Multi-domain]  Cd Length: 226  Bit Score: 96.97  E-value: 1.33e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   2 MRISLLLLWMLVSWPCAAGIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDINREPGSVKTPFVAVPPLFRLE 81
Cdd:PRK15218   1 MKWMIALCLACAAMPAWSGIYIYGTRIIYPAQKKDITVQLMNDGKRSSLIQAWIDNGDTSLPPEKLQVPFIMTPPVIRVA 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  82 PKGVQGLRIMHNKARMPTDRESAFWLNIYEIPPTGSVATQQQSMVLTMNTQMKIFWRPASLNNPESA-WARLTFHREGSV 160
Cdd:PRK15218  81 ANSGQQLKIKKLANNLPGDRESLFYLNVLDIPPNSDENKDKNIIKFALQNRIKLIYRPPGVQKVDKAtFSRLQLLRAPGS 160

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 550766465 161 LVCHNDSPYFVSFAGInfKAGEKLYPVTqlpdMMVAPFGEKRYAFAANApfsGQVQGELIDDNGN 225
Cdd:PRK15218 161 ISVKNNSANWITIPEI--KAKSKVNKET----LLLAPWSSQSITTTVVV---NSYTVTLIDDSGN 216
PRK15224 PRK15224
pili assembly chaperone PapD;
25-227 1.72e-23

pili assembly chaperone PapD;


Pssm-ID: 185146 [Multi-domain]  Cd Length: 237  Bit Score: 94.42  E-value: 1.72e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  25 ATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDINRepgsvKTPFVAVPPLFRLEPKGVQGLRIMHNKARMPTDRESA 104
Cdd:PRK15224  34 ATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSS-----PAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETL 108

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465 105 FWLNIYEIPPTGSVATQQQS-----MVLTMNTQMKIFWRPASLN-NPESAWARLTFHREGSVLVCHNDSPYFVSFAGINf 178
Cdd:PRK15224 109 QWVCIKAVPPENEPSDTQAKgatldLNLSINVCDKLIFRPDAVKgTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVT- 187

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*....
gi 550766465 179 kAGEKlyPVTQLPdmMVAPFGEKRYAFAANApfSGQVQGELIDDNGNSA 227
Cdd:PRK15224 188 -VGGK--PITGLE--YIPPFADKTLNMPGSA--HGDIEWRVITDFGGES 229
PRK15285 PRK15285
fimbrial chaperone StfD;
4-197 2.92e-20

fimbrial chaperone StfD;


Pssm-ID: 185185 [Multi-domain]  Cd Length: 250  Bit Score: 85.99  E-value: 2.92e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   4 ISLLLLWMLVSWPCAAGIIA-SATRVIFHEGEAQQSLMLVNTNP-WPVVVQTWVDDgdinrEPG-SVKTPFVAVPPLFRL 80
Cdd:PRK15285   9 LAAVLLLLLGGYGSAQAAIApDRTRLVFRGEDKSISVDLKNANSkLPYLAQSWVED-----EKGvKITSPLIVVPPVQRI 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  81 EPKGVQGLRI--MHNKARMPTDRESAFWLNIYEIPPTgsvATQQQSMVLTMNTQMKIFWRPASLN--NPESAWA-RLTFH 155
Cdd:PRK15285  84 EPSAIGQVKIqgMPALASLPQDRETLFYYNVREIPPQ---SDKPNTLQIALQTRIKVFYRPQALSkiDMQHPWQyKITLQ 160

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 550766465 156 REGSVLVCHNDSPYFVSFAgiNFKAGEKLYPVTQLPDMMVAP 197
Cdd:PRK15285 161 RQGNGYQVSNPTGYYVVLS--NASNRMDGTPARGFSPLVIAP 200
PRK15274 PRK15274
putative periplasmic fimbrial chaperone protein SteC; Provisional
 5-197 5.50e-20

putative periplasmic fimbrial chaperone protein SteC; Provisional


Pssm-ID: 185177 [Multi-domain]  Cd Length: 257  Bit Score: 85.60  E-value: 5.50e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   5 SLLLLWMLVSwpcAAGIIASATRVIFHEGEAQQSLMLVNTNP-WPVVVQTWVDDGDINREpgsvKTPFVAVPPLFRLEPK 83
Cdd:PRK15274  15 SVLLAAPLVS---HSAIVPDRTRVIFNGNENSITVTLKNGNAtLPYLAQAWLEDDKFAKD----TRYFTALPPLQRIEPK 87

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  84 --GVQGLRIMHNKARMPTDRESAFWLNIYEIPPTgsvATQQQSMVLTMNTQMKIFWRPASLN---NPESAW-ARLTFHRE 157
Cdd:PRK15274  88 sdGQVKVQPLPAAASLPQDRESLFYFNVREIPPK---SDKPNTLQLALQTRIKFFYRPVAVArqvDKTHPWqTKLTLTYQ 164

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 550766465 158 GSVLVCHNDSPYFVSFAGINFKAGEKlypVTQLPDMMVAP 197
Cdd:PRK15274 165 GDGVIFDNPTPFYLVISNAGSKENET---ASGFKNLLIAP 201
PRK11385 PRK11385
fimbrial chaperone;
3-180 1.86e-18

fimbrial chaperone;


Pssm-ID: 183112 [Multi-domain]  Cd Length: 236  Bit Score: 80.95  E-value: 1.86e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   3 RISLLL---LWMLVSWPCAAGIIASATRVIFHEGEAQQSLMLVNTNPwpvvvQTWVDDGDINR-------EPGSVKTPFV 72
Cdd:PRK11385   7 RLALLIfavLSLLVAGELQAGVVVGGTRFIFPADRESISILLTNTSQ-----ESWLINSKINRptrwaggEASTVPAPLL 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  73 AVPPLFRLEPKGVQGLRIMHNKAR-MPTDRESAFWLNIYEIPptgSVATQQQSMVLTMNTQMKIFWRPASL-NNPESAWA 150
Cdd:PRK11385  82 AAPPLILLKPGTTGTLRLLRTESDiLPVDRETLFELSIASVP---SGKVENQSVKVAMRSVFKLFWRPEGLpGDPLEAYQ 158

                        170       180       190
                 ....*....|....*....|....*....|..
gi 550766465 151 RLTFHREGSVLVCHNDSPYFVSF--AGINFKA 180
Cdd:PRK11385 159 QLRWTRNSQGVQLTNPTPYYINLiqVSVNGKA 190
PRK15233 PRK15233
fimbrial chaperone SefB;
20-231 2.81e-18

fimbrial chaperone SefB;


Pssm-ID: 185149 [Multi-domain]  Cd Length: 246  Bit Score: 80.54  E-value: 2.81e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  20 GIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDinrepGSVKTPFVAVPPLFRLEPKGVQGLRIMHNKARMPT 99
Cdd:PRK15233  41 GLRLGTTRVIYKEDAPSTSFWIMNEKEYPILVQTQVYNDD-----KSSKAPFIVTPPILKVESNARTRLKVIPTSNLFNK 115

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465 100 DRESAFWLNIYEIPPTGSVATQQQSMVLT-------MNTQMKIFWRPASLNNPESAWA-RLTFHREGSVLVCHNDSPYFV 171
Cdd:PRK15233 116 NEESLYWLCVKGVPPLNDNESNNKNNITTnlnvnvvTNSCIKLIYRPKTIDLTTMEIAdKLKLERKGNSIVIKNPTSSYV 195

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465 172 SFAgiNFKAGEKLYpvtQLPDMMVAPFGekrYAFAANAPFSgQVQGELIDDNGNSAVYNW 231
Cdd:PRK15233 196 NIA--NIKSGNLSF---NIPNGYIEPFG---YAQLPGGVHS-KITLTILDDNGAEIIRDY 246
PRK15254 PRK15254
fimbrial chaperone protein StdC; Provisional
 6-199 5.95e-18

fimbrial chaperone protein StdC; Provisional


Pssm-ID: 185166 [Multi-domain]  Cd Length: 239  Bit Score: 79.82  E-value: 5.95e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   6 LLLLWMLVSWP--CAAGIIASATRVIFHEGEAQQSLMLVNTNPW-PVVVQTWVDDGDinrepGSVKTPFVAVPPLFRLEP 82
Cdd:PRK15254   1 VILLALAAAWSqySPAAVNVDRTRIIMDAPQKTVAITLNNDDKTtPFLAQSWVTDAD-----GVRTDALMALPPLQRIDA 75

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  83 KGVQGLRIMHNKA---RMPTDRESAFWLNIYEIPPTgsvATQQQSMVLTMNTQMKIFWRP-----ASLNNPESawaRLTF 154
Cdd:PRK15254  76 GQKSQVRITQVRGltdKLPQDRETLFWFNVRGVPPK---PEDDNVLQLAMQSQLKLFYRPkaiirSSSDQPER---KLTA 149

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 550766465 155 HREGSVLVCHNDSPYFVSFAGINFKAGEKLYPVTQlpDMMVAPFG 199
Cdd:PRK15254 150 ERNAGHLTLRNPTPYYITVAWLGADRSHRLSGFRE--GVMVPPLG 192
PRK15192 PRK15192
pili/flagellar-assembly chaperone;
8-202 2.85e-16

pili/flagellar-assembly chaperone;


Pssm-ID: 185114 [Multi-domain]  Cd Length: 234  Bit Score: 75.12  E-value: 2.85e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   8 LLWML--VSWpCAAGIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDGDinREPGSVK----TPFVAVPPLFRLE 81
Cdd:PRK15192  10 IYWCLlpISW-AQAGVVIGGTRFIYHAGAPALSVPVSNHSEASWLIDTHILPGG--RWPGTKNegniTPFVVTPPLFMLS 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  82 PKGVQGLRIMHNKARMPTDRESAFWLNIYEIPPTGSVATQQQsmvLTMNTQMKIFWRPASL-NNPESAWARLTFHREGSV 160
Cdd:PRK15192  87 ARQENSMRVVYTGAPLPADRESLFTLSIAAIPSGKPEANRVQ---MAFRSALKLLYRPEGLaGNPQQAYRHLIWSLTPDG 163

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 550766465 161 LVCHNDSPYFVSFagINFKAGEKlypvTQLPDMMVAPFGEKR 202
Cdd:PRK15192 164 ATVRNPTPYYVTL--FLLRANER----AQDNAGVVAPFATRQ 199
PRK09918 PRK09918
putative fimbrial chaperone protein; Provisional
 6-174 4.08e-11

putative fimbrial chaperone protein; Provisional


Pssm-ID: 236632 [Multi-domain]  Cd Length: 230  Bit Score: 60.82  E-value: 4.08e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465   6 LLLLWMLVSwpcAAGIIASATRVIFHEGEAQQSLMLVNTNPWPVVVQTWVDDgdinrEPGSVKTPFVAVPPLFRLEPKGV 85
Cdd:PRK09918  14 LLSSSSAVH---AAGMVPETSVVIVEESDGEGSINVKNTDSNPILLYTTLVD-----LPEDKSKLLLVTPPVARVEPGQS 85

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 550766465  86 QGLR-IMHNKARMPTDR--ESAFwlniyE-IPPTGsvatqQQSMVLTMNTQMKI--FWRPASLNNPESAWARLTFHREGS 159
Cdd:PRK09918  86 QQVRfILKSGSPLNTEHllRVSF-----EgVPPKP-----GGKNKVVMPIRQDLpvLIQPAALPVVRDPWKLLVWSISGN 155

                        170
                 ....*....|....*
gi 550766465 160 VLVCHNDSPYFVSFA 174
Cdd:PRK09918 156 NLVVSNPSPYVVRLG 170
PapD_C pfam02753
Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is ...
 164-225 2.69e-10

Pili assembly chaperone PapD, C-terminal domain; Ig-like beta-sandwich fold. This domain is the C-terminal part of the pilus and flagellar-assembly chaperone protein PapD.


Pssm-ID: 426960 [Multi-domain]  Cd Length: 63  Bit Score: 54.58  E-value: 2.69e-10
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 550766465  164 HNDSPYFVSFAGINFKAGEKLYPvtqLPDMMVAPFGEKRYAFAANAPFSGQVQGELIDDNGN 225
Cdd:pfam02753   2 KNPTPYYVTFSSLSLGGGGKELA---LDPGMVAPFSSQTFAGLPAPAAGGTVSYTYINDYGG 60
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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