NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|555249897|ref|WP_023233472|]
View 

dihydropteroate synthase [Salmonella enterica]

Protein Classification

dihydropteroate synthase( domain architecture ID 10793597)

dihydropteroate synthase catalyzes the formation of 7,8-dihydropteroate from para-aminobenzoic acid and 6-hydroxymethyl-7,8-dihydropterin-pyrophosphate, a key step in the folate biosynthetic pathway; similar to Escherichia coli FolP

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
folP PRK11613
dihydropteroate synthase; Provisional
1-282 0e+00

dihydropteroate synthase; Provisional


:

Pssm-ID: 183230  Cd Length: 282  Bit Score: 609.06  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897   1 MKLFAQGATLDLTHPHVMGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIP 80
Cdd:PRK11613   1 MKLFAQGTTLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELDRVIP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  81 VLEAIAQRFEVWISVDTSKPEVIREAARAGAHIINDVRSLSEPSALEAAAETGLPVSLMHMQGNPKTMQEAPKYDDVFAE 160
Cdd:PRK11613  81 VVEAIAQRFEVWISVDTSKPEVIRESAKAGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897 161 VNRYFIEQIARCEKAGIAKEKLLLDPGFGFGKNLSHNYTLLARLGEFHHFNLPLLVGMSRKTMVGQLLNVGPSDRLNGSL 240
Cdd:PRK11613 161 VNRYFIEQIARCEAAGIAKEKLLLDPGFGFGKNLSHNYQLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSL 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 555249897 241 ACAVIAAMQGAQIIRVHDVKETVEAMRVVEATLSAKGNKRYE 282
Cdd:PRK11613 241 ACAVIAAMQGAQIIRVHDVKETVEAMRVVEATLSAKENKRYE 282
 
Name Accession Description Interval E-value
folP PRK11613
dihydropteroate synthase; Provisional
1-282 0e+00

dihydropteroate synthase; Provisional


Pssm-ID: 183230  Cd Length: 282  Bit Score: 609.06  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897   1 MKLFAQGATLDLTHPHVMGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIP 80
Cdd:PRK11613   1 MKLFAQGTTLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELDRVIP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  81 VLEAIAQRFEVWISVDTSKPEVIREAARAGAHIINDVRSLSEPSALEAAAETGLPVSLMHMQGNPKTMQEAPKYDDVFAE 160
Cdd:PRK11613  81 VVEAIAQRFEVWISVDTSKPEVIRESAKAGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897 161 VNRYFIEQIARCEKAGIAKEKLLLDPGFGFGKNLSHNYTLLARLGEFHHFNLPLLVGMSRKTMVGQLLNVGPSDRLNGSL 240
Cdd:PRK11613 161 VNRYFIEQIARCEAAGIAKEKLLLDPGFGFGKNLSHNYQLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSL 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 555249897 241 ACAVIAAMQGAQIIRVHDVKETVEAMRVVEATLSAKGNKRYE 282
Cdd:PRK11613 241 ACAVIAAMQGAQIIRVHDVKETVEAMRVVEATLSAKENKRYE 282
FolP COG0294
Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part ...
1-276 4.62e-168

Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis


Pssm-ID: 440063  Cd Length: 274  Bit Score: 466.07  E-value: 4.62e-168
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897   1 MKLfaqGATLDLTHPHVMGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIP 80
Cdd:COG0294    1 MTL---GRTLDLSRPLVMGILNVTPDSFSDGGRYNDPDAALAHAEEMVEEGADIIDIGGESTRPGAEPVSAEEELARVVP 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  81 VLEAIAQRFEVWISVDTSKPEVIREAARAGAHIINDVRSLS-EPSALEAAAETGLPVSLMHMQGNPKTMQEAPKYDDVFA 159
Cdd:COG0294   78 VIEALRAEFDVPISVDTYKAEVARAALEAGADIINDVSGLRfDPEMAEVAAEYGVPVVLMHMRGTPQTMQRNPHYDDVVA 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897 160 EVNRYFIEQIARCEKAGIAKEKLLLDPGFGFGKNLSHNYTLLARLGEFHHFNLPLLVGMSRKTMVGQLLNVGPSDRLNGS 239
Cdd:COG0294  158 EVRDFLEERIEAAEAAGIARERIILDPGIGFGKTLEHNLELLRRLDELRALGYPVLVGVSRKSFIGALLGRPPEERLAGT 237
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 555249897 240 LACAVIAAMQGAQIIRVHDVKETVEAMRVVEATLSAK 276
Cdd:COG0294  238 LAAAALAAARGADIVRVHDVAETVDALKVADAIRRAR 274
DHPS cd00739
DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional ...
15-270 4.32e-140

DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.


Pssm-ID: 238380  Cd Length: 257  Bit Score: 394.67  E-value: 4.32e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  15 PHVMGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIPVLEAIAQRFEVWIS 94
Cdd:cd00739    1 TQIMGILNVTPDSFSDGGRFLSLDKAVAHAEKMIAEGADIIDIGGESTRPGADPVSVEEELERVIPVLEALRGELDVLIS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  95 VDTSKPEVIREAARAGAHIINDVRSLS-EPSALEAAAETGLPVSLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCE 173
Cdd:cd00739   81 VDTFRAEVARAALEAGADIINDVSGGSdDPAMLEVAAEYGAPLVLMHMRGTPKTMQENPYYEDVVDEVLSFLEARLEAAE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897 174 KAGIAKEKLLLDPGFGFGKNLSHNYTLLARLGEFHHFNLPLLVGMSRKTMVGQLLNVGPSDRLNGSLACAVIAAMQGAQI 253
Cdd:cd00739  161 SAGVARNRIILDPGIGFGKTPEHNLELLRRLDELKQLGLPVLVGASRKSFIGALLGREPKDRDWGTLALSALAAANGADI 240
                        250
                 ....*....|....*..
gi 555249897 254 IRVHDVKETVEAMRVVE 270
Cdd:cd00739  241 VRVHDVKATRDALKVAD 257
DHPS TIGR01496
dihydropteroate synthase; This model represents dihydropteroate synthase, the enzyme that ...
17-271 5.75e-128

dihydropteroate synthase; This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by model TIGR00284. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid]


Pssm-ID: 273657  Cd Length: 257  Bit Score: 363.89  E-value: 5.75e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897   17 VMGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIPVLEAIAQRFEVWISVD 96
Cdd:TIGR01496   2 IMGIVNVTPDSFSDGGRFLSVDKAVAHAERMLEEGADIIDVGGESTRPGADRVSPEEELNRVVPVIKALRDQPDVPISVD 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897   97 TSKPEVIREAARAGAHIINDVRSLSEPSALEAAAETGLPVSLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEKAG 176
Cdd:TIGR01496  82 TYRAEVARAALEAGADIINDVSGGQDPAMLEVAAEYGVPLVLMHMRGTPRTMQENPHYEDVVEEVLRFLEARAEELVAAG 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  177 IAKEKLLLDPGFGFGKNLSHNYTLLARLGEFHHFNLPLLVGMSRKTMVGQLLNVGPSDRLNGSLACAVIAAMQGAQIIRV 256
Cdd:TIGR01496 162 VAAERIILDPGIGFGKTPEHNLELLKHLEEFVALGYPLLVGASRKSFIGALLGTPPEERLEGTLAASAYAVQKGADIVRV 241
                         250
                  ....*....|....*
gi 555249897  257 HDVKETVEAMRVVEA 271
Cdd:TIGR01496 242 HDVKETRDALKVLEA 256
Pterin_bind pfam00809
Pterin binding enzyme; This family includes a variety of pterin binding enzymes that all adopt ...
18-257 2.95e-110

Pterin binding enzyme; This family includes a variety of pterin binding enzymes that all adopt a TIM barrel fold. The family includes dihydropteroate synthase EC:2.5.1.15 as well as a group methyltransferase enzymes including methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) that catalyzes a key step in the Wood-Ljungdahl pathway of carbon dioxide fixation. It transfers the N5-methyl group from methyltetrahydrofolate (CH3-H4folate) to a cob(I)amide centre in another protein, the corrinoid iron-sulfur protein. MeTr is a member of a family of proteins that includes methionine synthase and methanogenic enzymes that activate the methyl group of methyltetra-hydromethano(or -sarcino)pterin.


Pssm-ID: 395651 [Multi-domain]  Cd Length: 243  Bit Score: 318.46  E-value: 2.95e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897   18 MGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIPVLEAIAQRFEVWISVDT 97
Cdd:pfam00809   1 MGILNVTPDSFSDGGRFLDLDKALAHARRMVEEGADIIDIGGESTRPGAERVDGEEEMERVLPVLAALRDEADVPISVDT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897   98 SKPEVIREAARAGAHIINDVRSLS-EPSALEAAAETGLPVSLMHMQGNPKTMQEAP-KYDDVFAEVNRYFIEQIARCEKA 175
Cdd:pfam00809  81 TKAEVAEAALKAGADIINDISGGDgDPEMAELAAEYGAAVVVMHMDGTPKTMQENEqQYEDVVEEVERFLRARVAAAEEA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  176 GIAKEKLLLDPGFGFGKNLSHNYTLLARLGEF-HHFNLPLLVGMSRKTMVGQLLNVGPSDRLNGSLACAVIAAMQGAQII 254
Cdd:pfam00809 161 GVPPEDIILDPGIGFGKTEEHNLELLRTLDELrVILGVPVLLGVSRKSFIGRGLPLGGEERDAGTAAFLALAIAAGADIV 240

                  ...
gi 555249897  255 RVH 257
Cdd:pfam00809 241 RVH 243
 
Name Accession Description Interval E-value
folP PRK11613
dihydropteroate synthase; Provisional
1-282 0e+00

dihydropteroate synthase; Provisional


Pssm-ID: 183230  Cd Length: 282  Bit Score: 609.06  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897   1 MKLFAQGATLDLTHPHVMGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIP 80
Cdd:PRK11613   1 MKLFAQGTTLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELDRVIP 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  81 VLEAIAQRFEVWISVDTSKPEVIREAARAGAHIINDVRSLSEPSALEAAAETGLPVSLMHMQGNPKTMQEAPKYDDVFAE 160
Cdd:PRK11613  81 VVEAIAQRFEVWISVDTSKPEVIRESAKAGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897 161 VNRYFIEQIARCEKAGIAKEKLLLDPGFGFGKNLSHNYTLLARLGEFHHFNLPLLVGMSRKTMVGQLLNVGPSDRLNGSL 240
Cdd:PRK11613 161 VNRYFIEQIARCEAAGIAKEKLLLDPGFGFGKNLSHNYQLLARLAEFHHFNLPLLVGMSRKSMIGQLLNVGPSERLSGSL 240
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 555249897 241 ACAVIAAMQGAQIIRVHDVKETVEAMRVVEATLSAKGNKRYE 282
Cdd:PRK11613 241 ACAVIAAMQGAQIIRVHDVKETVEAMRVVEATLSAKENKRYE 282
FolP COG0294
Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part ...
1-276 4.62e-168

Dihydropteroate synthase [Coenzyme transport and metabolism]; Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis


Pssm-ID: 440063  Cd Length: 274  Bit Score: 466.07  E-value: 4.62e-168
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897   1 MKLfaqGATLDLTHPHVMGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIP 80
Cdd:COG0294    1 MTL---GRTLDLSRPLVMGILNVTPDSFSDGGRYNDPDAALAHAEEMVEEGADIIDIGGESTRPGAEPVSAEEELARVVP 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  81 VLEAIAQRFEVWISVDTSKPEVIREAARAGAHIINDVRSLS-EPSALEAAAETGLPVSLMHMQGNPKTMQEAPKYDDVFA 159
Cdd:COG0294   78 VIEALRAEFDVPISVDTYKAEVARAALEAGADIINDVSGLRfDPEMAEVAAEYGVPVVLMHMRGTPQTMQRNPHYDDVVA 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897 160 EVNRYFIEQIARCEKAGIAKEKLLLDPGFGFGKNLSHNYTLLARLGEFHHFNLPLLVGMSRKTMVGQLLNVGPSDRLNGS 239
Cdd:COG0294  158 EVRDFLEERIEAAEAAGIARERIILDPGIGFGKTLEHNLELLRRLDELRALGYPVLVGVSRKSFIGALLGRPPEERLAGT 237
                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 555249897 240 LACAVIAAMQGAQIIRVHDVKETVEAMRVVEATLSAK 276
Cdd:COG0294  238 LAAAALAAARGADIVRVHDVAETVDALKVADAIRRAR 274
DHPS cd00739
DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional ...
15-270 4.32e-140

DHPS subgroup of Pterin binding enzymes. DHPS (dihydropteroate synthase), a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS.


Pssm-ID: 238380  Cd Length: 257  Bit Score: 394.67  E-value: 4.32e-140
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  15 PHVMGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIPVLEAIAQRFEVWIS 94
Cdd:cd00739    1 TQIMGILNVTPDSFSDGGRFLSLDKAVAHAEKMIAEGADIIDIGGESTRPGADPVSVEEELERVIPVLEALRGELDVLIS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  95 VDTSKPEVIREAARAGAHIINDVRSLS-EPSALEAAAETGLPVSLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCE 173
Cdd:cd00739   81 VDTFRAEVARAALEAGADIINDVSGGSdDPAMLEVAAEYGAPLVLMHMRGTPKTMQENPYYEDVVDEVLSFLEARLEAAE 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897 174 KAGIAKEKLLLDPGFGFGKNLSHNYTLLARLGEFHHFNLPLLVGMSRKTMVGQLLNVGPSDRLNGSLACAVIAAMQGAQI 253
Cdd:cd00739  161 SAGVARNRIILDPGIGFGKTPEHNLELLRRLDELKQLGLPVLVGASRKSFIGALLGREPKDRDWGTLALSALAAANGADI 240
                        250
                 ....*....|....*..
gi 555249897 254 IRVHDVKETVEAMRVVE 270
Cdd:cd00739  241 VRVHDVKATRDALKVAD 257
DHPS TIGR01496
dihydropteroate synthase; This model represents dihydropteroate synthase, the enzyme that ...
17-271 5.75e-128

dihydropteroate synthase; This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by model TIGR00284. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid]


Pssm-ID: 273657  Cd Length: 257  Bit Score: 363.89  E-value: 5.75e-128
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897   17 VMGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIPVLEAIAQRFEVWISVD 96
Cdd:TIGR01496   2 IMGIVNVTPDSFSDGGRFLSVDKAVAHAERMLEEGADIIDVGGESTRPGADRVSPEEELNRVVPVIKALRDQPDVPISVD 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897   97 TSKPEVIREAARAGAHIINDVRSLSEPSALEAAAETGLPVSLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEKAG 176
Cdd:TIGR01496  82 TYRAEVARAALEAGADIINDVSGGQDPAMLEVAAEYGVPLVLMHMRGTPRTMQENPHYEDVVEEVLRFLEARAEELVAAG 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  177 IAKEKLLLDPGFGFGKNLSHNYTLLARLGEFHHFNLPLLVGMSRKTMVGQLLNVGPSDRLNGSLACAVIAAMQGAQIIRV 256
Cdd:TIGR01496 162 VAAERIILDPGIGFGKTPEHNLELLKHLEEFVALGYPLLVGASRKSFIGALLGTPPEERLEGTLAASAYAVQKGADIVRV 241
                         250
                  ....*....|....*
gi 555249897  257 HDVKETVEAMRVVEA 271
Cdd:TIGR01496 242 HDVKETRDALKVLEA 256
Pterin_binding cd00423
Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and ...
15-270 3.76e-115

Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS. Cobalamin-dependent methyltransferases catalyze the transfer of a methyl group via a methyl- cob(III)amide intermediate. These include MeTr, a functional heterodimer, and the folate binding domain of MetH.


Pssm-ID: 238242 [Multi-domain]  Cd Length: 258  Bit Score: 331.54  E-value: 3.76e-115
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  15 PHVMGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIPVLEAIAQRFEVWIS 94
Cdd:cd00423    1 TLIMGILNVTPDSFSDGGKFLSLDKALEHARRMVEEGADIIDIGGESTRPGAEPVSVEEELERVIPVLRALAGEPDVPIS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  95 VDTSKPEVIREAARAGAHIINDVRSLS-EPSALEAAAETGLPVSLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCE 173
Cdd:cd00423   81 VDTFNAEVAEAALKAGADIINDVSGGRgDPEMAPLAAEYGAPVVLMHMDGTPQTMQNNPYYADVVDEVVEFLEERVEAAT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897 174 KAGIAKEKLLLDPGFGFGKNLSHNYTLLARLGEFHHFN-LPLLVGMSRKTMVGQLLNVGPSDRLNGSLACAVIAAMQGAQ 252
Cdd:cd00423  161 EAGIPPEDIILDPGIGFGKTEEHNLELLRRLDAFRELPgLPLLLGVSRKSFLGDLLSVGPKDRLAGTAAFLAAAILNGAD 240
                        250
                 ....*....|....*...
gi 555249897 253 IIRVHDVKETVEAMRVVE 270
Cdd:cd00423  241 IVRVHDVKELRDAIKVAE 258
Pterin_bind pfam00809
Pterin binding enzyme; This family includes a variety of pterin binding enzymes that all adopt ...
18-257 2.95e-110

Pterin binding enzyme; This family includes a variety of pterin binding enzymes that all adopt a TIM barrel fold. The family includes dihydropteroate synthase EC:2.5.1.15 as well as a group methyltransferase enzymes including methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) that catalyzes a key step in the Wood-Ljungdahl pathway of carbon dioxide fixation. It transfers the N5-methyl group from methyltetrahydrofolate (CH3-H4folate) to a cob(I)amide centre in another protein, the corrinoid iron-sulfur protein. MeTr is a member of a family of proteins that includes methionine synthase and methanogenic enzymes that activate the methyl group of methyltetra-hydromethano(or -sarcino)pterin.


Pssm-ID: 395651 [Multi-domain]  Cd Length: 243  Bit Score: 318.46  E-value: 2.95e-110
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897   18 MGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIPVLEAIAQRFEVWISVDT 97
Cdd:pfam00809   1 MGILNVTPDSFSDGGRFLDLDKALAHARRMVEEGADIIDIGGESTRPGAERVDGEEEMERVLPVLAALRDEADVPISVDT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897   98 SKPEVIREAARAGAHIINDVRSLS-EPSALEAAAETGLPVSLMHMQGNPKTMQEAP-KYDDVFAEVNRYFIEQIARCEKA 175
Cdd:pfam00809  81 TKAEVAEAALKAGADIINDISGGDgDPEMAELAAEYGAAVVVMHMDGTPKTMQENEqQYEDVVEEVERFLRARVAAAEEA 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  176 GIAKEKLLLDPGFGFGKNLSHNYTLLARLGEF-HHFNLPLLVGMSRKTMVGQLLNVGPSDRLNGSLACAVIAAMQGAQII 254
Cdd:pfam00809 161 GVPPEDIILDPGIGFGKTEEHNLELLRTLDELrVILGVPVLLGVSRKSFIGRGLPLGGEERDAGTAAFLALAIAAGADIV 240

                  ...
gi 555249897  255 RVH 257
Cdd:pfam00809 241 RVH 243
PRK13753 PRK13753
dihydropteroate synthase; Provisional
17-257 2.62e-30

dihydropteroate synthase; Provisional


Pssm-ID: 184303  Cd Length: 279  Bit Score: 114.80  E-value: 2.62e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  17 VMGILNVTPDSFSDGGAHNTLIEAVKHANLMVNAGATIIDVGGESTRPGAAEVSVEEELDRVIPVLEAIAQRFEVwISVD 96
Cdd:PRK13753   4 VFGILNLTEDSFFDESRRLDPAGAVTAAIEMLRVGSDVVDVGPAASHPDARPVSPADEIRRIAPLLDALSDQMHR-VSID 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897  97 TSKPEVIREAARAGAHIINDVRSLSEPSALEAAAETGLPVSLMH--MQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEK 174
Cdd:PRK13753  83 SFQPETQRYALKRGVGYLNDIQGFPDPALYPDIAEADCRLVVMHsaQRDGIATRTGHLRPEDALDEIVRFFEARVSALRR 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 555249897 175 AGIAKEKLLLDPGFGFGKNLSHNYTL--LARLGEFHH-FNLPLLVGMSRKTMVGQLLNVGPSDRLNGSLACAVIAAMQGA 251
Cdd:PRK13753 163 SGVAADRLILDPGMGFFLSPAPETSLhvLSNLQKLKSaLGLPLLVSVSRKSFLGATVGLPVKDLGPASLAAELHAIGNGA 242

                 ....*.
gi 555249897 252 QIIRVH 257
Cdd:PRK13753 243 DYVRTH 248
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH