|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15082 |
PRK15082 |
glutathione ABC transporter permease GsiD; Provisional |
3-303 |
0e+00 |
|
glutathione ABC transporter permease GsiD; Provisional
Pssm-ID: 185040 [Multi-domain] Cd Length: 301 Bit Score: 581.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 3 LLNWRRQAALNAMPGIRPGEIHTPWHEFWRRFRRQPVAMGAGIFVLLLIAVAIVAPWIAPYDAENYFDYDRLNEGPSLVH 82
Cdd:PRK15082 1 LFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHVALVAGLFVLLLIVVAIFAPWIAPYDAENYFDYDALNAGPSLQH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 83 WFGVDSLGRDIFSRVLVGAQISLAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGS 162
Cdd:PRK15082 81 WFGVDSLGRDIFSRILVGARISLAAGFFSVAIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAILGS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 163 GMANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSF 242
Cdd:PRK15082 161 GMANVIIAVAIFSIPAFARLVRGNTLVLKQQTYIESARSIGASDWTILLRHILPGTVSSIVVYFTMRIGTSIITAASLSF 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556279158 243 LGLGAQPPTPEWGAMLNEARADMVMSPHVALFPAVAIFLTVLAFNLLGDGLRDALDPKLKG 303
Cdd:PRK15082 241 LGLGAQPPTPEWGAMLNEARADMVIAPHVALFPSLAIFLTVLAFNLLGDGLRDALDPKIKG 301
|
|
| DppC |
COG1173 |
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ... |
25-298 |
1.45e-125 |
|
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];
Pssm-ID: 440786 [Multi-domain] Cd Length: 275 Bit Score: 359.43 E-value: 1.45e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 25 TPWHEFWRRFRRQPVAMGAGIFVLLLIAVAIVAPWIAPYDAeNYFDYDRLNEGPSLVHWFGVDSLGRDIFSRVLVGAQIS 104
Cdd:COG1173 3 SRWRRAWRRLRRNPLAVIGLVILLLLVLLALFAPLLAPYDP-TAQDLAARLQPPSAAHWLGTDQLGRDVLSRLLYGARIS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 105 LAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFSIPAFARLVR 184
Cdd:COG1173 82 LLVGLLAVLIALVIGVLLGLLAGYFGGWVDAVLMRLVDVLLAFPSLLLAIALVAVLGPGLLNVILALGLTGWPGYARLVR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 185 GNTLVLKQQTFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEARAD 264
Cdd:COG1173 162 AQVLSLREREYVEAARALGASPLRIIFRHILPNVLPPLIVQATLGIASAILAEAGLSFLGLGVQPPTPSWGTMLSEGRNY 241
|
250 260 270
....*....|....*....|....*....|....
gi 556279158 265 MVMSPHVALFPAVAIFLTVLAFNLLGDGLRDALD 298
Cdd:COG1173 242 LLTAPWLALFPGLAIVLTVLAFNLLGDGLRDALD 275
|
|
| nickel_nikC |
TIGR02790 |
nickel ABC transporter, permease subunit NikC; This family consists of the NikC family of ... |
43-298 |
2.45e-83 |
|
nickel ABC transporter, permease subunit NikC; This family consists of the NikC family of nickel ABC transporter permeases. Operons that contain this protein also contain a homologous permease subunit NikB. Nickel is used in cells as part of urease or certain hydrogenases or superoxide dismutases. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 131837 [Multi-domain] Cd Length: 258 Bit Score: 251.54 E-value: 2.45e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 43 AGIFVLLLIAVAIVAPWIAPYDAENYFDYDRLnEGPSLVHWFGVDSLGRDIFSRVLVGAQISLAAGVLAVLIGAAIGTVL 122
Cdd:TIGR02790 4 ALLIIAVLFLLAIFAPWIAPHDPLAQNLPMRL-LGPSMEYWLGTDHLGRCIFSRLIFGARVSLGSALLVLGLVLTIGLLI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 123 GLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSI 202
Cdd:TIGR02790 83 GGLAGYIGGRVDEAIMRVCDVFLSFPTIILSLAIVGILGPGLENVIIAIVLVHWAWYARMVRGMVVSLKQREFVLAARTS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 203 GASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVMSPHVALFPAVAIFLT 282
Cdd:TIGR02790 163 GASHWQIIRRHILPNILSPIIVLATLDIGHVILHIAGLSFLGLGIQPPTPEWGAMLSEAKQYIWTQPLLMIYPGLAILIS 242
|
250
....*....|....*.
gi 556279158 283 VLAFNLLGDGLRDALD 298
Cdd:TIGR02790 243 VMAFNLLGDALRDHLG 258
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
101-293 |
1.43e-19 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 84.25 E-value: 1.43e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 101 AQISLAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGS--------GMANVIIAVA 172
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVllgwgilpGLGLPALILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 173 IFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAqPPTP 252
Cdd:cd06261 81 LLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGE-APGP 159
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 556279158 253 EWGAMLNEARadmvmsphvaLFPAVAIFLTVLAFNLLGDGL 293
Cdd:cd06261 160 GTGLLLIFAI----------LFPGDLGVAAAVALILLLLSL 190
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
119-302 |
2.32e-17 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 78.11 E-value: 2.32e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 119 GTVLGLLAGYYEGWW-DRLIMRLCDVLFAFPGILLAIAVVAVMGSGMANV----IIAVAIFSIPAFARLVRGNTLVLKQQ 193
Cdd:pfam00528 1 GIPLGIIAALRRGRRlDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHgilpAIILALLGWAGYARLIRRAALRSLPS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 194 TFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFL----GLGAQPPTPEWGAMLNEaradmvmsp 269
Cdd:pfam00528 81 DLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLgswpGLGLLLIEAILGYDYPE--------- 151
|
170 180 190
....*....|....*....|....*....|...
gi 556279158 270 hvALFPAVAIFLTVLAFNLLGDGLRDALDPKLK 302
Cdd:pfam00528 152 --IQGPVLAAALILLLLNLLVDILQRLLDPRVR 182
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15082 |
PRK15082 |
glutathione ABC transporter permease GsiD; Provisional |
3-303 |
0e+00 |
|
glutathione ABC transporter permease GsiD; Provisional
Pssm-ID: 185040 [Multi-domain] Cd Length: 301 Bit Score: 581.69 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 3 LLNWRRQAALNAMPGIRPGEIHTPWHEFWRRFRRQPVAMGAGIFVLLLIAVAIVAPWIAPYDAENYFDYDRLNEGPSLVH 82
Cdd:PRK15082 1 LFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHVALVAGLFVLLLIVVAIFAPWIAPYDAENYFDYDALNAGPSLQH 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 83 WFGVDSLGRDIFSRVLVGAQISLAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGS 162
Cdd:PRK15082 81 WFGVDSLGRDIFSRILVGARISLAAGFFSVAIGAAIGTVLGLLAGYYEGWWDRIIMRICDVLFAFPGILLAIAVVAILGS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 163 GMANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSF 242
Cdd:PRK15082 161 GMANVIIAVAIFSIPAFARLVRGNTLVLKQQTYIESARSIGASDWTILLRHILPGTVSSIVVYFTMRIGTSIITAASLSF 240
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556279158 243 LGLGAQPPTPEWGAMLNEARADMVMSPHVALFPAVAIFLTVLAFNLLGDGLRDALDPKLKG 303
Cdd:PRK15082 241 LGLGAQPPTPEWGAMLNEARADMVIAPHVALFPSLAIFLTVLAFNLLGDGLRDALDPKIKG 301
|
|
| DppC |
COG1173 |
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ... |
25-298 |
1.45e-125 |
|
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];
Pssm-ID: 440786 [Multi-domain] Cd Length: 275 Bit Score: 359.43 E-value: 1.45e-125
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 25 TPWHEFWRRFRRQPVAMGAGIFVLLLIAVAIVAPWIAPYDAeNYFDYDRLNEGPSLVHWFGVDSLGRDIFSRVLVGAQIS 104
Cdd:COG1173 3 SRWRRAWRRLRRNPLAVIGLVILLLLVLLALFAPLLAPYDP-TAQDLAARLQPPSAAHWLGTDQLGRDVLSRLLYGARIS 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 105 LAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFSIPAFARLVR 184
Cdd:COG1173 82 LLVGLLAVLIALVIGVLLGLLAGYFGGWVDAVLMRLVDVLLAFPSLLLAIALVAVLGPGLLNVILALGLTGWPGYARLVR 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 185 GNTLVLKQQTFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEARAD 264
Cdd:COG1173 162 AQVLSLREREYVEAARALGASPLRIIFRHILPNVLPPLIVQATLGIASAILAEAGLSFLGLGVQPPTPSWGTMLSEGRNY 241
|
250 260 270
....*....|....*....|....*....|....
gi 556279158 265 MVMSPHVALFPAVAIFLTVLAFNLLGDGLRDALD 298
Cdd:COG1173 242 LLTAPWLALFPGLAIVLTVLAFNLLGDGLRDALD 275
|
|
| nickel_nikC |
TIGR02790 |
nickel ABC transporter, permease subunit NikC; This family consists of the NikC family of ... |
43-298 |
2.45e-83 |
|
nickel ABC transporter, permease subunit NikC; This family consists of the NikC family of nickel ABC transporter permeases. Operons that contain this protein also contain a homologous permease subunit NikB. Nickel is used in cells as part of urease or certain hydrogenases or superoxide dismutases. [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 131837 [Multi-domain] Cd Length: 258 Bit Score: 251.54 E-value: 2.45e-83
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 43 AGIFVLLLIAVAIVAPWIAPYDAENYFDYDRLnEGPSLVHWFGVDSLGRDIFSRVLVGAQISLAAGVLAVLIGAAIGTVL 122
Cdd:TIGR02790 4 ALLIIAVLFLLAIFAPWIAPHDPLAQNLPMRL-LGPSMEYWLGTDHLGRCIFSRLIFGARVSLGSALLVLGLVLTIGLLI 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 123 GLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSI 202
Cdd:TIGR02790 83 GGLAGYIGGRVDEAIMRVCDVFLSFPTIILSLAIVGILGPGLENVIIAIVLVHWAWYARMVRGMVVSLKQREFVLAARTS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 203 GASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVMSPHVALFPAVAIFLT 282
Cdd:TIGR02790 163 GASHWQIIRRHILPNILSPIIVLATLDIGHVILHIAGLSFLGLGIQPPTPEWGAMLSEAKQYIWTQPLLMIYPGLAILIS 242
|
250
....*....|....*.
gi 556279158 283 VLAFNLLGDGLRDALD 298
Cdd:TIGR02790 243 VMAFNLLGDALRDHLG 258
|
|
| PRK09881 |
PRK09881 |
D,D-dipeptide ABC transporter permease; |
27-303 |
2.11e-78 |
|
D,D-dipeptide ABC transporter permease;
Pssm-ID: 182131 [Multi-domain] Cd Length: 296 Bit Score: 240.49 E-value: 2.11e-78
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 27 WHEFWRRFRRQPVAMGAGIFVLLLIAVAIVAPWIAPYDAENYFDYDRLnEGPSLVHWFGVDSLGRDIFSRVLVGAQISLA 106
Cdd:PRK09881 20 GAKLVWMLKGSPLTVTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARL-LPPSAAHWFGTDEVGRDLFSRVLVGSQQSIL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 107 AGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFSIPAFARLVRGN 186
Cdd:PRK09881 99 AGLVVVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQ 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 187 TLVLKQQTFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEARADMV 266
Cdd:PRK09881 179 ALVVRQYTYVQAAKTFGASRWHLISWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVL 258
|
250 260 270
....*....|....*....|....*....|....*..
gi 556279158 267 MSPHVALFPAVAIFLTVLAFNLLGDGLRDALDPKLKG 303
Cdd:PRK09881 259 DQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKAGG 295
|
|
| nikC |
PRK10417 |
nickel transporter permease NikC; Provisional |
35-303 |
2.68e-77 |
|
nickel transporter permease NikC; Provisional
Pssm-ID: 236687 [Multi-domain] Cd Length: 272 Bit Score: 236.87 E-value: 2.68e-77
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 35 RRQPVAMGAGIFVLLLIAVAIVAPWIAPYDAEnYFDYDRLNEGPSLVHWFGVDSLGRDIFSRVLVGAQISLAAGVLAVLI 114
Cdd:PRK10417 1 SSRWSVRLALIIIALLALIALTSQWWLPYDPQ-AIDLPSRLLSPDAQHWLGTDHLGRDIFSRLMAGTRVSLGSVMACLLL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 115 GAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFSIPAFARLVRGNTLVLKQQT 194
Cdd:PRK10417 80 VLALGLVIGGSAGLLGGRVDQATMRVADMFMTFPTSILAFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISLRQRE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 195 FIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVMSPHVALF 274
Cdd:PRK10417 160 FVLAARLSGAGHVRVFIDHLLPAVIPQLLVLATLDIGHMMLHVAGLSFLGLGVTAPTAEWGVMINDARQYIWTQPLLMFW 239
|
250 260
....*....|....*....|....*....
gi 556279158 275 PAVAIFLTVLAFNLLGDGLRDALDPKLKG 303
Cdd:PRK10417 240 PGLALFISVMAFNLLGDALRDHLDPHLVT 268
|
|
| PRK10913 |
PRK10913 |
dipeptide ABC transporter permease DppC; |
25-302 |
1.88e-69 |
|
dipeptide ABC transporter permease DppC;
Pssm-ID: 182833 [Multi-domain] Cd Length: 300 Bit Score: 217.73 E-value: 1.88e-69
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 25 TPWHEFWRRFRRQPVAMGAGIFVLLLIAVAIVAPWIAPYDAENYFDYDRL-----NEGPSLVHWFGVDSLGRDIFSRVLV 99
Cdd:PRK10913 17 TPLQEFWHYFKRNKGAVVGLVYVVIMLFIAIFANWIAPHNPAEQFRDALLappvwQEGGSWAHILGTDDVGRDVLSRLMY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 100 GAQISLAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFSIPAF 179
Cdd:PRK10913 97 GARLSLLVGCLVVVLSLVMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPSIVNAALALTFVALPHY 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 180 ARLVRGNTLVLKQQTFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAMLN 259
Cdd:PRK10913 177 VRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINILPNCLAPLIVQASLGFSNAILDMAALGFLGMGAQPPTPEWGTMLS 256
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 556279158 260 EARADMVMSPHVALFPAVAIFLTVLAFNLLGDGLRDALDPKLK 302
Cdd:PRK10913 257 DVLQFAQSAWWVVTFPGLAILLTVLAFNLMGDGLRDALDPKLK 299
|
|
| SapC |
COG4171 |
ABC-type antimicrobial peptide export system, permease component SapC [Defense mechanisms]; |
22-302 |
1.33e-66 |
|
ABC-type antimicrobial peptide export system, permease component SapC [Defense mechanisms];
Pssm-ID: 443331 [Multi-domain] Cd Length: 296 Bit Score: 210.06 E-value: 1.33e-66
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 22 EIHTPWHEFWRRFRRQPVAMGAGIFVLLLIAVAIVAPWIAPYDAENYFDYDRL------NEGpSLVHWFGVDSLGRDIFS 95
Cdd:COG4171 11 RIPSPLKQIWQSFRKNPLAMIGLYGFLFLILLALFGPLLAPYSPDQQFIGALLlppswdDNG-DVSFFLGTDDLGRDILS 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 96 RVLVGAQISLAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFS 175
Cdd:COG4171 90 RLLYGARYTFGSALLVVLAAAIIGGIIGILAGMSRGLKSSILNHLLDTLLSIPSLLLAIIIVALLGPGLENAMLAITLAL 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 176 IPAFARLVRGNTLVLKQQTFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWG 255
Cdd:COG4171 170 LPQFIHAIYQAVHQELKKEYVLAARLDGASNWQLLRYSILPNILEVLVTELTRALSIAILDISALGFLGLGAQLPSPEWG 249
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 556279158 256 AMLNEARADMVMSPHVALFPAVAIFLTVLAFNLLGDGLRDALDPKLK 302
Cdd:COG4171 250 AMLGDSLELIYLAPWTVILPGLAIMFSVLIVNLVGDGLRRALNKGVE 296
|
|
| PRK15406 |
PRK15406 |
oligopeptide ABC transporter permease OppC; Provisional |
3-300 |
1.34e-58 |
|
oligopeptide ABC transporter permease OppC; Provisional
Pssm-ID: 185304 [Multi-domain] Cd Length: 302 Bit Score: 189.66 E-value: 1.34e-58
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 3 LLNWRRQAALNAMPGIRPGEIHTPWHEFWRRFRRQPVAMgAGIFVLLLIAV-AIVAPWIAPYDAENYfDYDRLNEGPSLV 81
Cdd:PRK15406 2 MLSKKNSEALENFSEKLEVEGRSLWQDARRRFMHNRAAV-ASLIVLVLIALfVILAPMLSQFAYDDT-DWGMMSSAPDME 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 82 --HWFGVDSLGRDIFSRVLVGAQISLAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAV 159
Cdd:PRK15406 80 sgHYFGTDSSGRDLLVRVAIGGRISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTF 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 160 MGSGMANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAAS 239
Cdd:PRK15406 160 FGQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTRGIVLRHIVPNVLGVVVVYASLLVPSMILFESF 239
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556279158 240 LSFLGLGAQPPTPEWGAMLNEARADMVMSPHVALFPAVAIFLTVLAFNLLGDGLRDALDPK 300
Cdd:PRK15406 240 LSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPAGFLVVTLFCFNFIGDGLRDALDPK 300
|
|
| PRK15111 |
PRK15111 |
peptide ABC transporter permease SapC; |
25-298 |
1.37e-45 |
|
peptide ABC transporter permease SapC;
Pssm-ID: 185066 [Multi-domain] Cd Length: 296 Bit Score: 156.01 E-value: 1.37e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 25 TPWHEFWRRFRRQPVAMGAGIFVLLLIAVAIVAPWIAPYDAENYF-DYDRLNegPSLVHW------FGVDSLGRDIFSRV 97
Cdd:PRK15111 14 GTLRTAWRKFYSDALAMVGLYGCAGLALLCLFGGWLAPYGIDQQFlGYQLLP--PSWSRYgevsffLGTDDLGRDVLSRL 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 98 LVGAQISLAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFSIP 177
Cdd:PRK15111 92 LSGAAPTVGGAFVVTLAATLCGLVLGVFAGATHGLRSAVLNHILDTLLSIPSLLLAIIVVAFAGPSLSHAMFAVWLALLP 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 178 AFARLVRGNTLVLKQQTFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAQPPTPEWGAM 257
Cdd:PRK15111 172 RMVRSIYSAVHDELEKEYVIAARLDGASTLNILWYAVLPNITAGLVTEITRALSMAILDIAALGFLDLGAQLPSPEWGAM 251
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 556279158 258 LNEARADMVMSPHVALFPAVAIFLTVLAFNLLGDGLRDALD 298
Cdd:PRK15111 252 LGDSLELIYVAPWTVMLPGAAIMLSVLLVNLLGDGIRRAII 292
|
|
| YejE |
COG4239 |
ABC-type microcin C transport system, permease component YejE [Secondary metabolites ... |
78-300 |
1.05e-43 |
|
ABC-type microcin C transport system, permease component YejE [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 443381 [Multi-domain] Cd Length: 342 Bit Score: 152.23 E-value: 1.05e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 78 PSLVHWFGVDSLGRDIFSRVLVGAQISLAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVV 157
Cdd:COG4239 117 PSAENWLGTDDQGRDVLARLIYGFRISVLFGLALTVISSVIGVAAGAVQGYFGGRVDLLFQRFIEIWSSMPELYLLIILS 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 158 AVMGSGMANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISA 237
Cdd:COG4239 197 SIFQPSFWLLLGILLLFGWMGLVGVVRAEFLRARNLEYVRAARALGVSDRRIMFRHILPNAMVATLTFLPFILSGAITTL 276
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 556279158 238 ASLSFLGLGAQPPTPEWGAMLNEARADMVmSPHVAL--FPAVAIFLTVLAFnlLGDGLRDALDPK 300
Cdd:COG4239 277 TSLDFLGFGLPPGSPSLGELLAQGKNNLQ-APWLGLsaFVVLALMLSLLVF--IGEAVRDAFDPR 338
|
|
| PRK15021 |
PRK15021 |
microcin C ABC transporter permease; Provisional |
78-299 |
1.78e-29 |
|
microcin C ABC transporter permease; Provisional
Pssm-ID: 184982 [Multi-domain] Cd Length: 341 Bit Score: 114.70 E-value: 1.78e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 78 PSLVHWFGVDSLGRDIFSRVLVGAQISLAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVV 157
Cdd:PRK15021 117 PSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVLAGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLS 196
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 158 AVMGSGMANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISA 237
Cdd:PRK15021 197 SVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTL 276
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 556279158 238 ASLSFLGLGAQPPTPEWGAMLNEARADMvMSP--HVALFPAVAIFLTVLAFnlLGDGLRDALDP 299
Cdd:PRK15021 277 TSLDFLGFGLPLGSPSLGELLLQGKNNL-QAPwlGITAFLSVAILLSLLIF--IGEAVRDAFDP 337
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
101-293 |
1.43e-19 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 84.25 E-value: 1.43e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 101 AQISLAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGS--------GMANVIIAVA 172
Cdd:cd06261 1 LLNTLLLALIATLLALVLGLLLGIILARKRGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVllgwgilpGLGLPALILA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 173 IFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLGAqPPTP 252
Cdd:cd06261 81 LLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGE-APGP 159
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 556279158 253 EWGAMLNEARadmvmsphvaLFPAVAIFLTVLAFNLLGDGL 293
Cdd:cd06261 160 GTGLLLIFAI----------LFPGDLGVAAAVALILLLLSL 190
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
119-302 |
2.32e-17 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 78.11 E-value: 2.32e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 119 GTVLGLLAGYYEGWW-DRLIMRLCDVLFAFPGILLAIAVVAVMGSGMANV----IIAVAIFSIPAFARLVRGNTLVLKQQ 193
Cdd:pfam00528 1 GIPLGIIAALRRGRRlDRLLRPLIDLLQALPSFVLAILLVVIAILSILGHgilpAIILALLGWAGYARLIRRAALRSLPS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 194 TFIESARSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFL----GLGAQPPTPEWGAMLNEaradmvmsp 269
Cdd:pfam00528 81 DLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLgswpGLGLLLIEAILGYDYPE--------- 151
|
170 180 190
....*....|....*....|....*....|...
gi 556279158 270 hvALFPAVAIFLTVLAFNLLGDGLRDALDPKLK 302
Cdd:pfam00528 152 --IQGPVLAAALILLLLNLLVDILQRLLDPRVR 182
|
|
| DppB |
COG0601 |
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid ... |
89-231 |
5.07e-13 |
|
ABC-type dipeptide/oligopeptide/nickel transport system, permease component [Amino acid transport and metabolism, Inorganic ion transport and metabolism];
Pssm-ID: 440366 [Multi-domain] Cd Length: 314 Bit Score: 68.17 E-value: 5.07e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 89 LGRDIFSRVLVGAQI------SLAAGVLAVLIGAAIGTVLGLLAGYYEG-WWDRLIMRLCDVLFAFPGILLAIAVVAVMG 161
Cdd:COG0601 77 LGTSFVYGRPVSDLIaerlpvTLELALLALLLALLIGIPLGILAALRRGsWLDRLITVLALLGISIPSFWLGLLLILLFA 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 162 --------SGMANV--------------IIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDATILFHHILPGTV 219
Cdd:COG0601 157 vklgwlpvSGRVSPwedfldalrhlilpALTLALGSLAGIARLTRSSMLEVLGQDYVRTARAKGLSERRVLLRHALRNAL 236
|
170
....*....|..
gi 556279158 220 SSIVVYFTMRIG 231
Cdd:COG0601 237 IPVVTVLGLQLG 248
|
|
| OppC_N |
pfam12911 |
N-terminal TM domain of oligopeptide transport permease C; Oligopeptide permeases (Opp) have ... |
25-74 |
8.23e-13 |
|
N-terminal TM domain of oligopeptide transport permease C; Oligopeptide permeases (Opp) have been identified in numerous gram-negative and -positive bacteria. These transport systems belong to the superfamily of highly conserved ATP-binding cassette transporters. Typically, Opp importers comprise a complex of five proteins. The oligopeptide-binding protein OppA is responsible for the capture of peptides from the external medium. Two integral highly hydrophobic membrane spanning proteins, OppB and OppC, form a channel through the membrane used for peptide translocation. This N-terminal domain appears to be the first TM domain of the molecule.
Pssm-ID: 463747 [Multi-domain] Cd Length: 53 Bit Score: 62.04 E-value: 8.23e-13
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 556279158 25 TPWHEFWRRFRRQPVAMGAGIFVLLLIAVAIVAPWIAPYDAENYFDYDRL 74
Cdd:pfam12911 1 SPWQDAWRRFRRNKLAMVGLVILLLLVLLAIFAPLLAPYDPDQQDLSADL 50
|
|
| PhnE |
TIGR01097 |
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound ... |
45-246 |
8.50e-09 |
|
phosphonate ABC transporter, permease protein PhnE; Phosphonates are a class of compound analogous to organic phosphates, but in which the C-O-P linkage is replaced by a direct, stable C-P bond. Some bacteria can utilize phosphonates as a source of phosphorus. This family consists of permease proteins of known or predicted phosphonate ABC transporters. Often this protein is found as a duplicated pair, occasionally as a fused pair. Certain "second" copies score in between the trusted and noise cutoff and should be considered true hits (by context). [Transport and binding proteins, Anions]
Pssm-ID: 273441 [Multi-domain] Cd Length: 250 Bit Score: 55.24 E-value: 8.50e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 45 IFVLLLIAVAIVApwiAPYDAEnyFDYDRLNEGPSLVHWFGVDSLGRDI--FSRVLVGAQISLAAGVLAVLIGAAIGTVL 122
Cdd:TIGR01097 7 IWLLALLVALYVW---AFALLG--FDLARLLAGPGQMADLLGRMFPPDWsyLPRILKALLETLAMAILGTVLAAVLAVPL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 123 GLLA--GYYEGWWDRLIMR-LCDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFSIPAFARLVrGNTLVLKQQTFIESA 199
Cdd:TIGR01097 82 ALLAarNITPSPWLYGLARlLLNFLRAIPELVWALIFVAAVGLGPFAGVLALAFHTVGFLGKLF-AEAIEEVDPGPVEAL 160
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 556279158 200 RSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLG 246
Cdd:TIGR01097 161 RATGASKLQVIRYGVLPQVLPQFLSYTLYRFEINVRAAAVLGLVGAG 207
|
|
| TauC |
COG0600 |
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ... |
86-234 |
8.51e-08 |
|
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440365 [Multi-domain] Cd Length: 254 Bit Score: 52.07 E-value: 8.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 86 VDSLGRDIFSRVLVGA-QISLAAGVLAVLIGAAIGTVLGLLAGYYEgWWDRLIMRLCDVLFAFPGILLAIAVVAVMGSGM 164
Cdd:COG0600 47 LAALVELLASGELWEHlLASLLRVLLGFALAALLGVPLGLLLGLSR-LLRRLLDPLLVFLRPIPPLALAPLLILWFGIGE 125
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 556279158 165 ANVIIAVAIFSIPAFARlvrgNTLV-LKQ--QTFIESARSIGASDATILFHHILPGTVSSIVVyfTMRIGVSI 234
Cdd:COG0600 126 ASKIFVIFLGAFFPILL----NTAAgVRSvdPELLELARSLGASRWQILRKVVLPAALPYIFT--GLRIALGL 192
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
95-243 |
2.29e-07 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 50.88 E-value: 2.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 95 SRVLVGAQISLAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGS-----GMANVII 169
Cdd:COG1177 57 PRLLDALLNSLLIALLSTLLATVLGTPAALALARYRFRGRRLLLALLLLPLVVPGIVLGVALLLLFSAlglsgGLWGLIL 136
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 556279158 170 AVAIFSIPAFARLVRgNTLVLKQQTFIESARSIGASDATILFHHILPGtvssivvyftmrIGVSIISAASLSFL 243
Cdd:COG1177 137 AHVVFTLPFVVLVVL-ARLQGFDPSLEEAARDLGASPWQTFRRVTLPL------------IAPGILAGALLAFT 197
|
|
| PhnE |
COG3639 |
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport ... |
45-246 |
1.71e-04 |
|
ABC-type phosphate/phosphonate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 442856 [Multi-domain] Cd Length: 244 Bit Score: 41.99 E-value: 1.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 45 IFVLLLIAVAIVAPWIAPydaenyFDYDRLNEGPSLVHWFGVDSLGRDI--FSRVLVGAQISLAAGVLAVLIGAAIGTVL 122
Cdd:COG3639 1 LLLLALLALLVWSLWGLE------FDLGRLIDGLPNLADFLSRFFPPDWsyLPDLLSALLETLAIALLGTLLGAVLALPL 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 123 GLLA--GYYEGWWDRLIMR-LCDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFSIPAFARLVrGNTLVLKQQTFIESA 199
Cdd:COG3639 75 AFLAarNLAPNPWVRLLARrLLNVLRAIPELVWALIFVAAVGLGPFAGVLALAIHTIGFLGKLF-AEAIEEIDPGPVEAL 153
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 556279158 200 RSIGASDATILFHHILPGTVSSIVVYFTMRIGVSIISAASLSFLGLG 246
Cdd:COG3639 154 RATGASRLQVIRYGVLPQVLPQFLSYTLYRFEINIRAATVLGLVGAG 200
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
31-243 |
9.66e-04 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 40.53 E-value: 9.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 31 WRRFRRQPVAMGAGIFVLLLIAVAIVAP-WIAPYDAENYFdydrLNEGPSLVHWFGVDSlgrdiFSRVLVGAQISLAAGV 109
Cdd:COG1178 278 PRRVKLGRWRWLALALCLLLVLLGLLLPlLALLLWSLTKA----LDDNLTLDNYRFVLL-----DPSLLRALLNSLLLAL 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 110 LAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGS--------GMANVIIAVAIFSIPAFAR 181
Cdd:COG1178 349 LAALLAVLLALLLAYLVRRRRGRLARLLDRLAMLPYAVPGIVLGLGLLLLFNRplplllygTLAILVLAYVVRFLPFALR 428
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 556279158 182 LVRGntlVLKQ--QTFIESARSIGASDATILFHHILPgtvssivvyftmRIGVSIISAASLSFL 243
Cdd:COG1178 429 SLEA---ALAQidPSLEEAARSLGASPLRTLRRVTLP------------LLRPGLLAAALLVFV 477
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
96-216 |
1.91e-03 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 38.96 E-value: 1.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 96 RVLVGAQISLAAGVLAVLIGAAIGTVLGLLAGYYEGWWDRLIMRLCDVLFAFPGILLAIAVVAVMGSG------------ 163
Cdd:COG0555 51 RVLAALKLSLGTALIAALINLVFGLPLAWVLVRYRFPGKRLVDALVDLPFALPTAVAGIALLLLFGPNgwlgqllaplgi 130
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 164 -----MANVIIAVAIFSIPAFARLVRGntlVLKQ--QTFIESARSIGASDATILFHHILP 216
Cdd:COG0555 131 kvaftPLGIVLAQTFVSLPFVVRTVQP---VLEEldPELEEAAATLGASRWQTFRRVILP 187
|
|
| pstA |
PRK11268 |
phosphate ABC transporter permease PstA; |
104-223 |
5.77e-03 |
|
phosphate ABC transporter permease PstA;
Pssm-ID: 183065 [Multi-domain] Cd Length: 295 Bit Score: 37.74 E-value: 5.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 104 SLAAGVLAVLIGAAIGTVLGLLAGYY------EGWWDRLIMRLCDVLFAFPGILLAI----AVVAVMG--SGMANViIAV 171
Cdd:PRK11268 82 AIAGSGLLILWATVVGTPLGIMAGIYlaeygrKSWLAEVIRFINDILLSAPSIVVGLfvytIVVAQMEhfSGWAGV-IAL 160
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 556279158 172 AIFSIPAFARLVRgNTLVLKQQTFIESARSIGASDATILFHHILPGTVSSIV 223
Cdd:PRK11268 161 ALLQIPIVIRTTE-NMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIM 211
|
|
| ssuC |
PRK11365 |
aliphatic sulfonate ABC transporter permease SsuC; |
103-248 |
7.68e-03 |
|
aliphatic sulfonate ABC transporter permease SsuC;
Pssm-ID: 183100 Cd Length: 263 Bit Score: 37.22 E-value: 7.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279158 103 ISLAAGVLAVLIGAAIGTVLGLLAGYYEgWWDRLIMRLCDVLFAFPGILLAIAVVAVMGSGMANVIIAVAIFSI-PAFAR 181
Cdd:PRK11365 64 ISSWRALIGFSIGGSLGLILGLISGLSR-WGERLLDTSIQMLRNVPHLALIPLVILWFGIDESAKIFLVALGTLfPIYIN 142
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556279158 182 LVRGNTLVlkQQTFIESARSIGASDATILFHHILPGTVSSIVV---------YFTMRIGVSIISAASLSFLGLGAQ 248
Cdd:PRK11365 143 TWHGIRNI--DRGLVEMARSYGLSGIPLFIHVILPGALPSIMVgvrfalglmWLTLIVAETISANSGIGYLAMNAR 216
|
|
| |
