|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10592 |
PRK10592 |
putrescine transporter subunit: membrane component of ABC superfamily; Provisional |
1-281 |
2.19e-169 |
|
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
Pssm-ID: 182574 Cd Length: 281 Bit Score: 469.72 E-value: 2.19e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 1 MNDLPVVRSPWRILILVLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYSELFHDDAMMSAVGLSLTIAACAATAAA 80
Cdd:PRK10592 1 MNNLPVVRSPWRIVILVLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELFRDDAMMSAVGLSLTIAACAATAAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 81 ILGTIAAVVMVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWPSDRGMLTIWLAHVTFCTAYVAVVIS 160
Cdd:PRK10592 81 ILGTIAAVVMVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVIS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 161 SRLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNP 240
Cdd:PRK10592 161 SRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNP 240
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 556279230 241 EINALATLILGVVGVVGFIAWYLMARAEKQRVRDIQRARQG 281
Cdd:PRK10592 241 EINALATLILGVVGIVGFIAWYLMARAEKQRIRDIQRARRG 281
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
8-271 |
7.03e-84 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 252.34 E-value: 7.03e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 8 RSPWRILILVLGFTFLYAPMLMLVIYSFNSSKLVT-VWAGWSTRWYSELFHDDAMMSAVGLSLTIAACAATAAAILGTIA 86
Cdd:COG1177 5 GRLLLRLFLALVLLFLYLPILVLVLYSFNDSWFLTfPPEGFTLRWYAELFSDPRLLDALLNSLLIALLSTLLATVLGTPA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 87 AVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAigwpsdRGMLTIWLAHVTFCTAYVAVVISSRLREL 166
Cdd:COG1177 85 ALALARY-RFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLS------GGLWGLILAHVVFTLPFVVLVVLARLQGF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 167 DHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALA 246
Cdd:COG1177 158 DPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPGVTTLPVYIYSMIRRGISPEINALS 237
|
250 260
....*....|....*....|....*
gi 556279230 247 TLILGVVGVVGFIAWYLMARAEKQR 271
Cdd:COG1177 238 TLLILLSLLLLLLAERLRRRGERRR 262
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
82-256 |
8.86e-13 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 65.38 E-value: 8.86e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 82 LGTIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWPSDrGMLTIWLAHVtFCTAYVAVVISS 161
Cdd:cd06261 18 LGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGL-GLPALILALL-LIAPFARLIRRA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 162 RLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPE 241
Cdd:cd06261 95 ALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPGTGLLLIFAILFPGD 174
|
170
....*....|....*
gi 556279230 242 INALATLILGVVGVV 256
Cdd:cd06261 175 LGVAAAVALILLLLS 189
|
|
| 3a0106s02 |
TIGR00969 |
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ... |
4-266 |
2.21e-12 |
|
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]
Pssm-ID: 273370 Cd Length: 271 Bit Score: 65.45 E-value: 2.21e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 4 LPVVRSPWRILILVLGFtFLYAPMLMLVIYSFNSsklvtvwaGWSTRWysELFHDDAMMSAVGLSLTIAACAATAAAILG 83
Cdd:TIGR00969 12 IKWGKLSLGIALLYVFL-ILILPVAALFVQAFSK--------GLGQFW--QNATDPIAVSAYNLTLLMALIAVPLNGVFG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 84 TIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWPSDRGM------LTIWLAHVTFCTAYVAV 157
Cdd:TIGR00969 81 LLIAWVLTRY-QFPGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFGIqiiftwPGMALAMIFVSLPFVVR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 158 VISSRLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSG--PGAT-TLPMLVFSSV 234
Cdd:TIGR00969 160 EVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGniPGKTlTLPLLIEERL 239
|
250 260 270
....*....|....*....|....*....|..
gi 556279230 235 RMGVNPEINALATLILGVVGVVGFIAWYLMAR 266
Cdd:TIGR00969 240 EQYDYPGAYVIAAVLLLVSLVTLFLINALQAR 271
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
83-266 |
3.12e-06 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 46.52 E-value: 3.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 83 GTIAAVVMVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALghAIGWpsdrGMLTIWLAHVTFCTAYVAVVISSR 162
Cdd:pfam00528 1 GIPLGIIAALRRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILS--ILGH----GILPAIILALLGWAGYARLIRRAA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 163 LRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFV-SGPGATTLPMLVFSSVRMGVNPE 241
Cdd:pfam00528 75 LRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLgSWPGLGLLLIEAILGYDYPEIQG 154
|
170 180
....*....|....*....|....*
gi 556279230 242 INALATLILGVVGVVGFIAWYLMAR 266
Cdd:pfam00528 155 PVLAAALILLLLNLLVDILQRLLDP 179
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK10592 |
PRK10592 |
putrescine transporter subunit: membrane component of ABC superfamily; Provisional |
1-281 |
2.19e-169 |
|
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
Pssm-ID: 182574 Cd Length: 281 Bit Score: 469.72 E-value: 2.19e-169
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 1 MNDLPVVRSPWRILILVLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYSELFHDDAMMSAVGLSLTIAACAATAAA 80
Cdd:PRK10592 1 MNNLPVVRSPWRIVILVLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYGELFRDDAMMSAVGLSLTIAACAATAAA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 81 ILGTIAAVVMVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWPSDRGMLTIWLAHVTFCTAYVAVVIS 160
Cdd:PRK10592 81 ILGTIAAVVMVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVIS 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 161 SRLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNP 240
Cdd:PRK10592 161 SRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNP 240
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 556279230 241 EINALATLILGVVGVVGFIAWYLMARAEKQRVRDIQRARQG 281
Cdd:PRK10592 241 EINALATLILGVVGIVGFIAWYLMARAEKQRIRDIQRARRG 281
|
|
| PotC |
COG1177 |
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ... |
8-271 |
7.03e-84 |
|
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];
Pssm-ID: 440790 [Multi-domain] Cd Length: 262 Bit Score: 252.34 E-value: 7.03e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 8 RSPWRILILVLGFTFLYAPMLMLVIYSFNSSKLVT-VWAGWSTRWYSELFHDDAMMSAVGLSLTIAACAATAAAILGTIA 86
Cdd:COG1177 5 GRLLLRLFLALVLLFLYLPILVLVLYSFNDSWFLTfPPEGFTLRWYAELFSDPRLLDALLNSLLIALLSTLLATVLGTPA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 87 AVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAigwpsdRGMLTIWLAHVTFCTAYVAVVISSRLREL 166
Cdd:COG1177 85 ALALARY-RFRGRRLLLALLLLPLVVPGIVLGVALLLLFSALGLS------GGLWGLILAHVVFTLPFVVLVVLARLQGF 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 167 DHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALA 246
Cdd:COG1177 158 DPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFTLSFDEFVITLFLAGPGVTTLPVYIYSMIRRGISPEINALS 237
|
250 260
....*....|....*....|....*
gi 556279230 247 TLILGVVGVVGFIAWYLMARAEKQR 271
Cdd:COG1177 238 TLLILLSLLLLLLAERLRRRGERRR 262
|
|
| potC |
PRK09500 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
12-264 |
3.29e-65 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 236542 [Multi-domain] Cd Length: 256 Bit Score: 204.45 E-value: 3.29e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 12 RILILVLGFTFLYAPMLMLVIYSFNSSKLVTVWAGWSTRWYSELFHDDAMMSAVGLSLTIAACAATAAAILGTIAAVVMV 91
Cdd:PRK09500 6 RGGFMTLVYAYLYIPIIILIVNSFNSSRFGINWKGFTTKWYELLFNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALY 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 92 RFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWpsdrgmLTIWLAHVTFCTAYVAVVISSRLRELDHSIE 171
Cdd:PRK09500 86 RY-RFRGKKFVSGMLFVVMMSPDIVMAISLLVLFMLLGIQLGF------WSLLFAHITFCLPFVVVTVYSRLKGFDVRML 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 172 EAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEINALATLILG 251
Cdd:PRK09500 159 EAAKDLGASEFTILRKIILPLALPAVAAGWLLSFTLSLDDVVVSSFVTGPSYEILPLKIYSMVKVGVSPEVNALATILLV 238
|
250
....*....|...
gi 556279230 252 VVGVVGFIAWYLM 264
Cdd:PRK09500 239 LSLVLVILSQLLA 251
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
4-266 |
1.20e-25 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 105.63 E-value: 1.20e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 4 LPVVRSPWRILILVLGFTFLYAPMLMLVIYSFNSsklvTVWAGWSTRWYSELFHDDAMMSAVGLSLTIAACAATAAAILG 83
Cdd:COG1178 283 LGRWRWLALALCLLLVLLGLLLPLLALLLWSLTK----ALDDNLTLDNYRFVLLDPSLLRALLNSLLLALLAALLAVLLA 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 84 TIAAVVMVRfGRFRGSNGFAFMITAPLVMPDVITGLSLlllFVALGHAIGWPSDRGMLTIWLAHVTFCTAYVAVVISSRL 163
Cdd:COG1178 359 LLLAYLVRR-RRGRLARLLDRLAMLPYAVPGIVLGLGL---LLLFNRPLPLLLYGTLAILVLAYVVRFLPFALRSLEAAL 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 164 RELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPEIN 243
Cdd:COG1178 435 AQIDPSLEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKELSATLLLRPPGFETLAVLIYQLASSGRYGEAA 514
|
250 260
....*....|....*....|...
gi 556279230 244 ALATLILGVVGVVGFIAWYLMAR 266
Cdd:COG1178 515 ALALLLVLVSLLPVLLLERLLGR 537
|
|
| FbpB |
COG1178 |
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism]; |
1-280 |
3.63e-25 |
|
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440791 [Multi-domain] Cd Length: 538 Bit Score: 104.47 E-value: 3.63e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 1 MNDLPVVRSPWRILILVLGFT-FLYAPMLMLVIYSFnssklvtvwaGWSTRWYSELFHDDAMMSAVGLSLTIAACAATAA 79
Cdd:COG1178 1 MSTRPRRRPRLLLLLLALLLAlLVLLPLLALLLRAF----------TDGLANFWALLSDPYLWRALGNTLLLALLVTLLS 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 80 AILGTIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLF-------VALGHAIGW--PSDRGMLTIWLAHVTF 150
Cdd:COG1178 71 LLLGVPLAWLLART-DFPGRRLLRWLLLLPLALPPYVVALAWIALFgpngllnTLLRALFGLepPDIYGLGGIILVLVLF 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 151 CTAYVAVVISSRLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVsGPGATTLPMLV 230
Cdd:COG1178 150 NYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFLLCLADFGTPLVL-GGGYTTLTTAI 228
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|.
gi 556279230 231 FSSVRMGVN-PEINALATLILGVVGVVGFIAWYLMARAEKQRVRDIQRARQ 280
Cdd:COG1178 229 YQAWLGDFDlGAAAALALVLLLLVLLLLLLERRLRRRRRYATVGGRARRPR 279
|
|
| CysU |
COG0555 |
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ... |
8-269 |
1.81e-18 |
|
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];
Pssm-ID: 440321 [Multi-domain] Cd Length: 268 Bit Score: 82.49 E-value: 1.81e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 8 RSPWRILILVLGFTFLY------APMLMLVIYSFNssklvtvwAGWSTRWysELFHDDAMMSAVGLSLTIAACAATAAAI 81
Cdd:COG0555 3 RRVLPGFGLTLGLTLLYlslivlLPLAALVLKAAG--------LGWAEFW--AVLTSPRVLAALKLSLGTALIAALINLV 72
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 82 LGTIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWPSDRG------MLTIWLAHVTFCTAYV 155
Cdd:COG0555 73 FGLPLAWVLVRY-RFPGKRLVDALVDLPFALPTAVAGIALLLLFGPNGWLGQLLAPLGikvaftPLGIVLAQTFVSLPFV 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 156 AVVISSRLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSG--PGAT-TLPMLVFS 232
Cdd:COG0555 152 VRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFALAFARALGEFGAVIFIAGnlPMKTeILPLLIYL 231
|
250 260 270
....*....|....*....|....*....|....*..
gi 556279230 233 SVRMGVNPEINALATLILGVVGVVGFIAWYLMARAEK 269
Cdd:COG0555 232 KLEEGDYAGATAIALVLLLISFLLLLLINLLQRRSRR 268
|
|
| PotB |
COG1176 |
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ... |
8-271 |
2.05e-17 |
|
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];
Pssm-ID: 440789 [Multi-domain] Cd Length: 287 Bit Score: 80.19 E-value: 2.05e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 8 RSPWRILILVLGFT--FLYAPMLMLVIYSFNS-SKLVTVWAGWSTRWYSELFHDDAMMSAVGLSLTIAACAATAAAILGT 84
Cdd:COG1176 9 LRPLLLLLPALLWLllFFVLPLLLLLVYSFTTrDPYGGVVPGFTLENYARLFTDPLYLKVLLRTLWIALLTTLICLLLGY 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 85 IAAVVMVRfGRFRGSNGFAFMITAPLVMPDVITGLSLLLLF------VALGHAIGWPSD-----RGMLTIWLAHVTFCTA 153
Cdd:COG1176 89 PIAYFLAR-APPRWRNLLLLLVILPFWTSFLVRTYAWIVLLgrngllNSLLLALGLIDEplrllYTEFAVVIGLVYVYLP 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 154 YVAVVISSRLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSS 233
Cdd:COG1176 168 FMVLPLYAALEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSLLVFIPALGAFVTPALLGGGKVLMIGNLIYQQ 247
|
250 260 270
....*....|....*....|....*....|....*....
gi 556279230 234 VRMGVN-PEINALATLILGVVGVVGFIAWYLMARAEKQR 271
Cdd:COG1176 248 FLSALNwPLAAALAVVLLLIVLLVLLLYLRLLRRRRLLG 286
|
|
| UgpA |
COG1175 |
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism]; |
9-268 |
2.22e-16 |
|
ABC-type sugar transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440788 [Multi-domain] Cd Length: 298 Bit Score: 77.10 E-value: 2.22e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 9 SPWRILILVlgftFLYAPMLMLVIYSFNSSKLVT---VWAGWstRWYSELFHDDAMMSAVGLSLTIAACAATAAAILGTI 85
Cdd:COG1175 25 LPALLLLLV----FVLYPLLYTLYLSFTDWNLLGpppEFVGL--DNYARLFTDPRFWNALGNTLLFTVVSVPLQLVLGLL 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 86 AAVVMVRfgRFRGSNGFAFMITAPLVMPDVITGLSLLLLF-----------VALG-HAIGWPSDRG--MLTIWLAHVTFC 151
Cdd:COG1175 99 LALLLNR--KLRGRGFFRTLFFLPWVISPVVVALIWKWLFnpdygllnallGALGlEPINWLGDPSlaLPAVIIVTVWKG 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 152 TAYVAVVISSRLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLD--DLVIASFVSGPG--ATTLP 227
Cdd:COG1175 177 TGFNMLIFLAGLQSIPRELYEAARIDGASPWQRFRRITLPLLRPTILFVLVLSTIGALQvfDLVYVLTGGGPGnsTTTLV 256
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 556279230 228 MLV----FSSVRMGVNpeiNALATLILGVVGVVGFIAWYLMARAE 268
Cdd:COG1175 257 LYIyqtaFQQFDFGYA---SAIAVVLFLIILVLTLLQLRLLRRRE 298
|
|
| ModB |
COG4149 |
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and ... |
58-271 |
1.55e-14 |
|
ABC-type molybdate transport system, permease component ModB [Inorganic ion transport and metabolism]; ABC-type molybdate transport system, permease component ModB is part of the Pathway/BioSystem: Molybdopterin biosynthesis
Pssm-ID: 443320 [Multi-domain] Cd Length: 223 Bit Score: 70.85 E-value: 1.55e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 58 DDAMMSAVGLSLTIAACAATAAAILGTIAAVVMVRfGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFvalghaigwpSD 137
Cdd:COG4149 2 SPEDWSALWLSLKVALIATLLLLLLGIPLAWWLAR-TRFRGKGLLEALVTLPLVLPPTVLGFYLLLLF----------GR 70
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 138 RGMLTIWLAHV-------TFCTAYVA--------VVISSR--LRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISG 200
Cdd:COG4149 71 NGPLGQLLEELfgislvfTWTGAVLAsvvvslplMVQPLRaaFEAVDPRLEEAARTLGASPWRVFFRVTLPLAKPGILAG 150
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556279230 201 WLLAFTLSLDD----LVIASFVsgPGAT-TLPMLVFSSVRMGVNPEINALAtLILGVVGVVGFIAWYLMARAEKQR 271
Cdd:COG4149 151 AVLAFARALGEfgatLMFAGNI--PGKTqTLPLAIYDAVEAGDYAAAHALS-LILLAISFVVLLLLNLLNRRRRRR 223
|
|
| modB |
PRK09421 |
molybdate ABC transporter permease subunit; |
63-232 |
7.93e-13 |
|
molybdate ABC transporter permease subunit;
Pssm-ID: 181841 Cd Length: 229 Bit Score: 66.10 E-value: 7.93e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 63 SAVGLSLTIAACAATAAAILGTIAAVVMVRfGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWPSDRGMLT 142
Cdd:PRK09421 9 QAVLLSLKVSSVAVLFSLPFGILVAWLLAR-CRFPGKSLLDSLLHLPLVLPPVVTGYLLLISMGRRGFIGQWLYEWFGIS 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 143 I---WLAHVTFC--TAYVAVVISSRL--RELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDL-VI 214
Cdd:PRK09421 88 FafsWRGAALAAavMAFPLMVRAIRLslEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEFgAT 167
|
170 180
....*....|....*....|
gi 556279230 215 ASFVSG-PGAT-TLPMLVFS 232
Cdd:PRK09421 168 ITFVSNiPGETqTIPSAMYT 187
|
|
| TM_PBP2 |
cd06261 |
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ... |
82-256 |
8.86e-13 |
|
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.
Pssm-ID: 119394 [Multi-domain] Cd Length: 190 Bit Score: 65.38 E-value: 8.86e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 82 LGTIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWPSDrGMLTIWLAHVtFCTAYVAVVISS 161
Cdd:cd06261 18 LGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLGWGILPGL-GLPALILALL-LIAPFARLIRRA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 162 RLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFSSVRMGVNPE 241
Cdd:cd06261 95 ALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLAFARALGEFALVSFLGGGEAPGPGTGLLLIFAILFPGD 174
|
170
....*....|....*
gi 556279230 242 INALATLILGVVGVV 256
Cdd:cd06261 175 LGVAAAVALILLLLS 189
|
|
| 3a0106s02 |
TIGR00969 |
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and ... |
4-266 |
2.21e-12 |
|
sulfate ABC transporter, permease protein; This model describes a subfamily of both CysT and CysW, paralogous and generally tandemly encoded permease proteins of the sulfate ABC transporter. [Transport and binding proteins, Anions]
Pssm-ID: 273370 Cd Length: 271 Bit Score: 65.45 E-value: 2.21e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 4 LPVVRSPWRILILVLGFtFLYAPMLMLVIYSFNSsklvtvwaGWSTRWysELFHDDAMMSAVGLSLTIAACAATAAAILG 83
Cdd:TIGR00969 12 IKWGKLSLGIALLYVFL-ILILPVAALFVQAFSK--------GLGQFW--QNATDPIAVSAYNLTLLMALIAVPLNGVFG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 84 TIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWPSDRGM------LTIWLAHVTFCTAYVAV 157
Cdd:TIGR00969 81 LLIAWVLTRY-QFPGRKLLDALIDLPFALSPVVAGLTLALLYGSNGWLGSWLASFGIqiiftwPGMALAMIFVSLPFVVR 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 158 VISSRLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSG--PGAT-TLPMLVFSSV 234
Cdd:TIGR00969 160 EVQPVLEELGTEAEEAAATLGASGWQTFWRVTLPSIRWALLYGVVLTFARALGEFGAVVVVSGniPGKTlTLPLLIEERL 239
|
250 260 270
....*....|....*....|....*....|..
gi 556279230 235 RMGVNPEINALATLILGVVGVVGFIAWYLMAR 266
Cdd:TIGR00969 240 EQYDYPGAYVIAAVLLLVSLVTLFLINALQAR 271
|
|
| UgpE |
COG0395 |
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and ... |
5-232 |
1.77e-10 |
|
ABC-type glycerol-3-phosphate transport system, permease component [Carbohydrate transport and metabolism];
Pssm-ID: 440164 [Multi-domain] Cd Length: 282 Bit Score: 60.11 E-value: 1.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 5 PVVRSPWRILILVLGFTFLYaPMLMLVIYSFNSSKLVTVW------AGWSTRWYSELFHDDAMMSAVGLSLTIAACAATA 78
Cdd:COG0395 11 RLGRILLYLLLILLALLFLF-PLYWMVVTSFKPPAEIFSGppsllpSEFTLENYRAAFTDGPFGRYLLNSLIVAVVSTVL 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 79 AAILGTIAAVVMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGhaigWPSDRgmLTIWLAHVTFCTAYVAVV 158
Cdd:COG0395 90 SLLLSSLAAYALARF-RFRGRKLLFLLILATLMIPGQVLLIPLYLLFRQLG----LLNTY--WGLILPYLAFGLPFGIFL 162
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 556279230 159 ISSRLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIAS-FVSGPGATTLPMLVFS 232
Cdd:COG0395 163 LRQFFRSIPRELEEAARIDGASEFRIFWRIVLPLSKPALATVAIFTFIGAWNDFLWPLiLLTSPDLRTLPVGLAS 237
|
|
| cysT |
CHL00187 |
sulfate transport protein; Provisional |
9-209 |
1.89e-10 |
|
sulfate transport protein; Provisional
Pssm-ID: 214388 [Multi-domain] Cd Length: 237 Bit Score: 59.64 E-value: 1.89e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 9 SPWRILILVLGFTFLYaPMLMLVIYSFNSSklvtvwagWSTRWysELFHDDAMMSAVGLSLTIAACAATAAAILGTIAAV 88
Cdd:CHL00187 12 SIYIISLSYIIFLLVL-PILALLIKASQQP--------WSDFL--QKATEPIALSAYSLTLSMALIAALINGFFGLLIAW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 89 VMVRFgRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWPSDRGM------LTIWLAHVTFCTAYVAVVISSR 162
Cdd:CHL00187 81 VLVRY-NFPGKRLLDAAVDLPFALPTSVAGLTLATVYGDNGWIGHLLSHLGIqivftkLGVLLAMIFVSFPFVVRTIQPV 159
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 556279230 163 LRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSL 209
Cdd:CHL00187 160 LQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLALTFSRAI 206
|
|
| PRK15050 |
PRK15050 |
2-aminoethylphosphonate transport system permease PhnU; Provisional |
8-233 |
5.70e-09 |
|
2-aminoethylphosphonate transport system permease PhnU; Provisional
Pssm-ID: 237888 [Multi-domain] Cd Length: 296 Bit Score: 55.78 E-value: 5.70e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 8 RSPWRIL---ILVLGFTFLYaPMLMLVIYSFNSSklvtvwAGWSTRWYSELFHDDAMMSAVGLSLTIAACAATAAAILGT 84
Cdd:PRK15050 22 LRPLLWLllpLLVLAPLVVY-PLVRVVLQSLTGE------HGLGLATYRAVLGSPDFRGALLTTLQIAFASTAGCLVLGV 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 85 IAAVVMVrFGRFRGSNGFAFMITAPLVMPDVI----------TGLSLLLLFVALGHAIGWPSD--RGMLTIWLAHVTFCT 152
Cdd:PRK15050 95 LLALVLA-FVPFPGASLVGRFIDTFVAFPSFLitlaftflygSAGSVNIALQRLFGLEAPPLDflYSPGGVILAEITFYT 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 153 AYVAVVISSRLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGATTLPMLVFS 232
Cdd:PRK15050 174 PFVVRPLLAAFAQLDARQLEAAASLGASPWRVARRVILPEAWPALAAGGSLCLLLTLNEFGIVLFTGAKDVVTLPVLIYS 253
|
.
gi 556279230 233 S 233
Cdd:PRK15050 254 K 254
|
|
| PhnU2 |
TIGR03262 |
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding ... |
13-266 |
8.50e-08 |
|
putative 2-aminoethylphosphonate ABC transporter, permease protein; [Transport and binding proteins, Amino acids, peptides and amines]
Pssm-ID: 274495 [Multi-domain] Cd Length: 546 Bit Score: 52.76 E-value: 8.50e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 13 ILILVLGFTFLYAPMLMLVIYSFNSSKlvTVWAGWSTrwYSELFHDDAMMSAVGLSLTIAACAATAAAILGTIAAVVMVR 92
Cdd:TIGR03262 8 AGMILALLLFLLLPLLALLTKSVYDSD--GDFIGLAN--FAEYFATPGLLQSLGNSLTVSAIVTAIVVPLAFAFAYALTR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 93 fGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGW---PSDRGMLTIWLAHVTFCTAYVAVVISSRLRELDHS 169
Cdd:TIGR03262 84 -SRIPGKGAFRLVALLPLLAPSLLPAISLIYLFGNQGLLKGLlggFSIYGFWGIVIGEVFYTFPHALMILVTALSLADGR 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 170 IEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGpGATTLPMLVFSSVRMGVNPEINALATLI 249
Cdd:TIGR03262 163 LYEAARAMGASPWRTFFTVTLPGAKYGLISAAFVVFTLVITDFGVPKVIGG-DYNVLATDIYKQVIGQQNFPMGAVVGVL 241
|
250
....*....|....*..
gi 556279230 250 LGVVGVVGFIAWYLMAR 266
Cdd:TIGR03262 242 LLLPALLAFGIDRAIQR 258
|
|
| PRK10683 |
PRK10683 |
putrescine transporter subunit: membrane component of ABC superfamily; Provisional |
159-221 |
1.01e-06 |
|
putrescine transporter subunit: membrane component of ABC superfamily; Provisional
Pssm-ID: 182646 Cd Length: 317 Bit Score: 49.32 E-value: 1.01e-06
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 556279230 159 ISSRLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGP 221
Cdd:PRK10683 203 IYTALTRIDYSLVEAALDLGARPLKTFFSVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGP 265
|
|
| PRK10971 |
PRK10971 |
sulfate/thiosulfate ABC transporter permease CysT; |
16-266 |
1.50e-06 |
|
sulfate/thiosulfate ABC transporter permease CysT;
Pssm-ID: 182873 Cd Length: 277 Bit Score: 48.60 E-value: 1.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 16 LVLGFTFLYAPMLMLVIYSfnssKLVTVWAGWSTRWYSELFHDDAMMSAVGLSLTIAACAATAAAILGTIAAVVMVRFgR 95
Cdd:PRK10971 15 LSLGTSLLFVCLILLLPLS----ALVMQLSQMSWAQYWEVITNPQVVAAYKVTLLSAFVASIFNAVFGLLMAWILTRY-R 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 96 FRGSNGFAFMITAPLVMPDVITGLSLLLLFVALGHAIGWPSDRGM------LTIWLAHVTFCTAYVAVVISSRLRELDHS 169
Cdd:PRK10971 90 FPGRTLLDALMDLPFALPTAVAGLTLASLFSVNGWYGEWLAKFDIkvtytwLGIAVAMAFTSIPFVVRTVQPVLEELGPE 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 170 IEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSGPGA---TTLPMLVFSSVRMGVNPEINALA 246
Cdd:PRK10971 170 YEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAGNIAwktEVTSLMIFVRLQEFDYPAASAIA 249
|
250 260
....*....|....*....|
gi 556279230 247 TLILGVVGVVGFIAWYLMAR 266
Cdd:PRK10971 250 SVILAASLLLLFSINTLQSR 269
|
|
| BPD_transp_1 |
pfam00528 |
Binding-protein-dependent transport system inner membrane component; The alignments cover the ... |
83-266 |
3.12e-06 |
|
Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.
Pssm-ID: 334128 [Multi-domain] Cd Length: 183 Bit Score: 46.52 E-value: 3.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 83 GTIAAVVMVRFGRFRGSNGFAFMITAPLVMPDVITGLSLLLLFVALghAIGWpsdrGMLTIWLAHVTFCTAYVAVVISSR 162
Cdd:pfam00528 1 GIPLGIIAALRRGRRLDRLLRPLIDLLQALPSFVLAILLVVIAILS--ILGH----GILPAIILALLGWAGYARLIRRAA 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 163 LRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFV-SGPGATTLPMLVFSSVRMGVNPE 241
Cdd:pfam00528 75 LRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLALAFGGALGGAVLLEFLgSWPGLGLLLIEAILGYDYPEIQG 154
|
170 180
....*....|....*....|....*
gi 556279230 242 INALATLILGVVGVVGFIAWYLMAR 266
Cdd:pfam00528 155 PVLAAALILLLLNLLVDILQRLLDP 179
|
|
| YnjC |
COG4135 |
ABC-type uncharacterized transport system YnjBCD, permease component [General function ... |
132-209 |
3.87e-04 |
|
ABC-type uncharacterized transport system YnjBCD, permease component [General function prediction only];
Pssm-ID: 443310 [Multi-domain] Cd Length: 564 Bit Score: 41.78 E-value: 3.87e-04
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 556279230 132 IGWPSDRGMLTIWLAHVTFCTAYVAVVISSRLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSL 209
Cdd:COG4135 418 LRLGLDGTWLAVIWAHLVFVLPYVFLSLAGPWRALDPRYAQVAASLGASPWRVFWRVKLPLLLRPILTAAAVGFAVSV 495
|
|
| potB |
PRK09497 |
spermidine/putrescine ABC transporter membrane protein; Reviewed |
161-220 |
9.63e-04 |
|
spermidine/putrescine ABC transporter membrane protein; Reviewed
Pssm-ID: 181910 Cd Length: 285 Bit Score: 40.06 E-value: 9.63e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 161 SRLRELDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIASFVSG 220
Cdd:PRK09497 171 SSIEKLDKPLLEAARDLGANKLQTFIRIIIPLTMPGIIAGCLLVLLPAMGMFYVSDLLGG 230
|
|
| MalG |
COG3833 |
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and ... |
11-232 |
1.25e-03 |
|
ABC-type maltose transport system, permease component MalG [Carbohydrate transport and metabolism];
Pssm-ID: 443045 [Multi-domain] Cd Length: 282 Bit Score: 39.75 E-value: 1.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 11 WRILILVLGFTFLYAPMLMLVIYSFNSSKLVT----VWAGWSTRWYSELFHDDAMMSAVGLSLTIAACAATAAAILGTIA 86
Cdd:COG3833 17 LRHLVLIILAIIALFPILWVVSASFNPGGSLYssslIPENFTLENYKKLFTETPFLRWFLNSLIVAVVTAIISVFLAALA 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 87 AVVMVRFgRFRGSNGF-----------AFM-ITAPLVMPDVI--TGLSLLLLFVALGHAIGwpsdrgmLTIWLAHVTFCT 152
Cdd:COG3833 97 AYAFSRF-RFKGRKAGllallllqmfpAFLaLVALYLLLSALglLNTLLGLILVYLGGAIP-------FNTWLMKGYFDT 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556279230 153 ayvavvissrlreLDHSIEEAAMDLGAAPLKVFFVITLPMIMPAVISGWLLAFTLSLDDLVIAS-FVSGPGATTLPMLVF 231
Cdd:COG3833 169 -------------IPKELDEAAKIDGASHFQIFFRIILPLAKPILAVVALLSFIGPWNDFILASvLLRSPENYTLAVGLY 235
|
.
gi 556279230 232 S 232
Cdd:COG3833 236 S 236
|
|
| |
