NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|556284370|ref|WP_023289889|]
View 

MULTISPECIES: YdcY family protein [Klebsiella]

Protein Classification

YdcY family protein( domain architecture ID 10566629)

YdcY family protein is a DUF2526 domain-containing protein similar to Escherichia coli protein YdcY

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF2526 pfam10735
Protein of unknown function (DUF2526); This family of proteins with unknown function is ...
 1-76 9.82e-38

Protein of unknown function (DUF2526); This family of proteins with unknown function is restricted to Enterobacteriaceae. The family has a highly conserved sequence.


:

Pssm-ID: 402390  Cd Length: 76  Bit Score: 120.47  E-value: 9.82e-38
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556284370   1 MAHLDEVIVKVDDILAEGVIAHMNELLIALSDDAQLSREERYTQQQRLRTAIAHHGRQHQEEQDARREQLTKGGAI 76
Cdd:pfam10735  1 MSHLDEVKVQVDAALQENVIAHMNELLIALSDDAQLSREQRYQQQQRLRTAIAHHGRQEREDARARREQLTKGGKI 76
 
Name Accession Description Interval E-value
DUF2526 pfam10735
Protein of unknown function (DUF2526); This family of proteins with unknown function is ...
 1-76 9.82e-38

Protein of unknown function (DUF2526); This family of proteins with unknown function is restricted to Enterobacteriaceae. The family has a highly conserved sequence.


Pssm-ID: 402390  Cd Length: 76  Bit Score: 120.47  E-value: 9.82e-38
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556284370   1 MAHLDEVIVKVDDILAEGVIAHMNELLIALSDDAQLSREERYTQQQRLRTAIAHHGRQHQEEQDARREQLTKGGAI 76
Cdd:pfam10735  1 MSHLDEVKVQVDAALQENVIAHMNELLIALSDDAQLSREQRYQQQQRLRTAIAHHGRQEREDARARREQLTKGGKI 76
 
Name Accession Description Interval E-value
DUF2526 pfam10735
Protein of unknown function (DUF2526); This family of proteins with unknown function is ...
 1-76 9.82e-38

Protein of unknown function (DUF2526); This family of proteins with unknown function is restricted to Enterobacteriaceae. The family has a highly conserved sequence.


Pssm-ID: 402390  Cd Length: 76  Bit Score: 120.47  E-value: 9.82e-38
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556284370   1 MAHLDEVIVKVDDILAEGVIAHMNELLIALSDDAQLSREERYTQQQRLRTAIAHHGRQHQEEQDARREQLTKGGAI 76
Cdd:pfam10735  1 MSHLDEVKVQVDAALQENVIAHMNELLIALSDDAQLSREQRYQQQQRLRTAIAHHGRQEREDARARREQLTKGGKI 76
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH