|
Name |
Accession |
Description |
Interval |
E-value |
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
1-544 |
0e+00 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 711.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 1 MTTSTPDiqpavQHTAQVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHT 80
Cdd:PRK06183 1 MAAQHPD-----AHDTDVVIVGAGPVGLTLANLLGQYGVRVLVLERWPTLYDLPRAVGIDDEALRVLQAIGLADEVLPHT 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 81 TPWHAMRFLTPKGRCFADIQ-PMTDEFGWSRRNAFIQPQVDAVMYHGLQRFPQVRCLFSREVEAFSQSSDGVTLNIKGPD 159
Cdd:PRK06183 76 TPNHGMRFLDAKGRCLAEIArPSTGEFGWPRRNAFHQPLLEAVLRAGLARFPHVRVRFGHEVTALTQDDDGVTVTLTDAD 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 160 GERETVRADWLVACDGGASFIRRTLNVPFEGKTAPNQWIVID--IANDPLATPHVYLCCDPVRPYVSAALPHGVRRFEFM 237
Cdd:PRK06183 156 GQRETVRARYVVGCDGANSFVRRTLGVPFEDLTFPERWLVVDvlIANDPLGGPHTYQYCDPARPYTSVRLPHGRRRWEFM 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 238 VMPGETEAQLSEPHNMRRLLSKVLPDPDRVELIRQRVYTHNARLAERFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFN 317
Cdd:PRK06183 236 LLPGETEEQLASPENVWRLLAPWGPTPDDAELIRHAVYTFHARVADRWRSGRVLLAGDAAHLMPPFAGQGMNSGIRDAAN 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 318 LAWKLALVVNGKAGEALLDSYQQERRDHAKAMIDLSVTAGHVLAPPKRWQGAARDGlswllnylppvkryflemrfkpmp 397
Cdd:PRK06183 316 LAWKLAAVLRGRAGDALLDTYEQERRPHARAMIDLAVRLGRVICPTDRLAAALRDA------------------------ 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 398 qyregalltdgagkASPVGKMFIQPQVTLENGESLLLDEVIGANFAIIGWGCNPQWGLDAGQIARWRAIGVRFIQVVPEV 477
Cdd:PRK06183 372 --------------VLPVGTLFPQPRVELGGGDRGLLDDVLGPGFAVLGWGCDPLAGLSDEQRARWRALGARFVQVVPAV 437
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 556285258 478 QIHReqdnaPGTLRVGDKQNRLKSWFAQHNTAIAVVRPDRFVAALAIPQTLGAQLTALAEKMTLAAG 544
Cdd:PRK06183 438 QAHT-----AQDDHDSDVDGALRAWLARHGASAVLLRPDRYVAAAADAQTLGALLAALAALLHLTRA 499
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
16-353 |
2.44e-91 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 284.22 E-value: 2.44e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 16 AQVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHTTPWHAMRFLTPKGRC 95
Cdd:pfam01494 2 TDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLPRAHGLNQRTMELLRQAGLEDRILAEGVPHEGMGLAFYNTRR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 96 FADIQPmtdEFGWSRRNAFIQPQVDAVMYHGLQRFP-QVRclFSREVEAFSQSSDGVTLNIKGP-DGERETVRADWLVAC 173
Cdd:pfam01494 82 RADLDF---LTSPPRVTVYPQTELEPILVEHAEARGaQVR--FGTEVLSLEQDGDGVTAVVRDRrDGEEYTVRAKYLVGC 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 174 DGGASFIRRTLNVPFEGkTAPNQWIVIDIANDPL--------ATPHVYLCCDP-----VRPYVSAALPHGVRRFEFMVMP 240
Cdd:pfam01494 157 DGGRSPVRKTLGIEFEG-FEGVPFGSLDVLFDAPdlsdpverAFVHYLIYAPHsrgfmVGPWRSAGRERYYVQVPWDEEV 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 241 GETEAQLSEPHNMRRLLSKVLPDPDRVELIRQRVYTHNARLAERFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAW 320
Cdd:pfam01494 236 EERPEEFTDEELKQRLRSIVGIDLALVEILWKSIWGVASRVATRYRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAW 315
|
330 340 350
....*....|....*....|....*....|...
gi 556285258 321 KLALVVNGKAGEALLDSYQQERRDHAKAMIDLS 353
Cdd:pfam01494 316 KLAAVLRGQAGESLLDTYSAERLPVAWAVVDFA 348
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
13-386 |
3.33e-71 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 230.98 E-value: 3.33e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 13 QHTAQVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHTTPWHAMRFLT-P 91
Cdd:COG0654 1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLWDRLLARGAPIRGIRVRDgS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 92 KGRCFADIQpmTDEFGWSRRNAFIQPQVDAVMYHGLQRFPqVRCLFSREVEAFSQSSDGVTLNIKgpDGerETVRADWLV 171
Cdd:COG0654 81 DGRVLARFD--AAETGLPAGLVVPRADLERALLEAARALG-VELRFGTEVTGLEQDADGVTVTLA--DG--RTLRADLVV 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 172 ACDGGASFIRRTLNVPFEGKTAPNQWIVIDIAndplatphvylccdpvrpyvsaalphgvrrfefmvmpgeteaqlsepH 251
Cdd:COG0654 154 GADGARSAVRRLLGIGFTGRDYPQRALWAGVR-----------------------------------------------T 186
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 252 NMRRLLSKVLPDPDRVELIRQR-VYTHNARLAERFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAWKLALVVNGKA 330
Cdd:COG0654 187 ELRARLAAAGPRLGELLELSPRsAFPLRRRRAERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRD 266
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 556285258 331 GEALLDSYQQERRDHAKAMIDLSVTAGHVLAPPKRWQGAARDGLSWLLNYLPPVKR 386
Cdd:COG0654 267 DEAALARYERERRPRAARVQRAADALGRLFHPDSPPLRLLRNAGLRLLDRLPPLKG 322
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
18-389 |
1.03e-23 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 103.05 E-value: 1.03e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLVEK------LDKLIDyPRAIGIDDESLRAMQAVGLVDDVLP-HTTPWHAMRFL- 89
Cdd:TIGR01988 2 IVIVGGGMVGLALALALARSGLKVALIEAtplpapADPGFD-NRVSALSAASIRLLEKLGVWDKIEPaRAQPIRDIHVSd 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 90 --TPKGRCFADIQPMTDEFGWSRRNAFIQpqvdAVMYHGLQRFPQVRCLFSREVEAFSQSSDGVTLNIKgpDGERetVRA 167
Cdd:TIGR01988 81 ggSFGALRFDADEIGLEALGYVVENRVLQ----QALWERLQELPNVTLLCPARVVELPRHSDHVELTLD--DGQQ--LRA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 168 DWLVACDGGASFIRRTLNVPFEGKtAPNQWIVidIANdplatphvylccdpvrpyVSAALPHGVRRFEFMvMPGETEAQL 247
Cdd:TIGR01988 153 RLLVGADGANSKVRQLAGIPTTGW-DYGQSAV--VAN------------------VKHERPHQGTAWERF-TPTGPLALL 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 248 -----------SEPHNMRRLLsKVLPDPDRVELIRQR---------------VYTHNARLAERFRIDRVLLAGDAAHIMP 301
Cdd:TIGR01988 211 plpdnrsslvwTLPPEEAERL-LALSDEEFLAELQRAfgsrlgaitlvgerhAFPLSLTHAKRYVAPRLALIGDAAHTIH 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 302 VWQGQGYNSGMRDAFNLAwklALVVNGKA-GE-----ALLDSYQQERRDHAKAMI---DLSVTAGHVLAPPKRwqgAARD 372
Cdd:TIGR01988 290 PLAGQGLNLGLRDVAALA---EVLEDARRrGEdigslRVLQRYERRRRFDNAAMLgatDGLNRLFSNDFPPLR---LLRN 363
|
410
....*....|....*...
gi 556285258 373 -GLsWLLNYLPPVKRYFL 389
Cdd:TIGR01988 364 lGL-RLLNNLPPLKNFIA 380
|
|
| MDR |
cd05188 |
Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; ... |
18-95 |
9.98e-03 |
|
Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc.
Pssm-ID: 176178 [Multi-domain] Cd Length: 271 Bit Score: 38.07 E-value: 9.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLV----EKLDKLIDYPRAIGID-----DESLRAMQAVGLVD---DVLPHTTPW-H 84
Cdd:cd05188 138 VLVLGAGGVGLLAAQLAKAAGARVIVTdrsdEKLELAKELGADHVIDykeedLEEELRLTGGGGADvviDAVGGPETLaQ 217
|
90
....*....|.
gi 556285258 85 AMRFLTPKGRC 95
Cdd:cd05188 218 ALRLLRPGGRI 228
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| mhpA |
PRK06183 |
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase; |
1-544 |
0e+00 |
|
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase;
Pssm-ID: 235727 [Multi-domain] Cd Length: 500 Bit Score: 711.68 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 1 MTTSTPDiqpavQHTAQVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHT 80
Cdd:PRK06183 1 MAAQHPD-----AHDTDVVIVGAGPVGLTLANLLGQYGVRVLVLERWPTLYDLPRAVGIDDEALRVLQAIGLADEVLPHT 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 81 TPWHAMRFLTPKGRCFADIQ-PMTDEFGWSRRNAFIQPQVDAVMYHGLQRFPQVRCLFSREVEAFSQSSDGVTLNIKGPD 159
Cdd:PRK06183 76 TPNHGMRFLDAKGRCLAEIArPSTGEFGWPRRNAFHQPLLEAVLRAGLARFPHVRVRFGHEVTALTQDDDGVTVTLTDAD 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 160 GERETVRADWLVACDGGASFIRRTLNVPFEGKTAPNQWIVID--IANDPLATPHVYLCCDPVRPYVSAALPHGVRRFEFM 237
Cdd:PRK06183 156 GQRETVRARYVVGCDGANSFVRRTLGVPFEDLTFPERWLVVDvlIANDPLGGPHTYQYCDPARPYTSVRLPHGRRRWEFM 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 238 VMPGETEAQLSEPHNMRRLLSKVLPDPDRVELIRQRVYTHNARLAERFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFN 317
Cdd:PRK06183 236 LLPGETEEQLASPENVWRLLAPWGPTPDDAELIRHAVYTFHARVADRWRSGRVLLAGDAAHLMPPFAGQGMNSGIRDAAN 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 318 LAWKLALVVNGKAGEALLDSYQQERRDHAKAMIDLSVTAGHVLAPPKRWQGAARDGlswllnylppvkryflemrfkpmp 397
Cdd:PRK06183 316 LAWKLAAVLRGRAGDALLDTYEQERRPHARAMIDLAVRLGRVICPTDRLAAALRDA------------------------ 371
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 398 qyregalltdgagkASPVGKMFIQPQVTLENGESLLLDEVIGANFAIIGWGCNPQWGLDAGQIARWRAIGVRFIQVVPEV 477
Cdd:PRK06183 372 --------------VLPVGTLFPQPRVELGGGDRGLLDDVLGPGFAVLGWGCDPLAGLSDEQRARWRALGARFVQVVPAV 437
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 556285258 478 QIHReqdnaPGTLRVGDKQNRLKSWFAQHNTAIAVVRPDRFVAALAIPQTLGAQLTALAEKMTLAAG 544
Cdd:PRK06183 438 QAHT-----AQDDHDSDVDGALRAWLARHGASAVLLRPDRYVAAAADAQTLGALLAALAALLHLTRA 499
|
|
| FAD_binding_3 |
pfam01494 |
FAD binding domain; This domain is involved in FAD binding in a number of enzymes. |
16-353 |
2.44e-91 |
|
FAD binding domain; This domain is involved in FAD binding in a number of enzymes.
Pssm-ID: 396193 [Multi-domain] Cd Length: 348 Bit Score: 284.22 E-value: 2.44e-91
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 16 AQVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHTTPWHAMRFLTPKGRC 95
Cdd:pfam01494 2 TDVLIVGGGPAGLMLALLLARAGVRVVLVERHATTSVLPRAHGLNQRTMELLRQAGLEDRILAEGVPHEGMGLAFYNTRR 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 96 FADIQPmtdEFGWSRRNAFIQPQVDAVMYHGLQRFP-QVRclFSREVEAFSQSSDGVTLNIKGP-DGERETVRADWLVAC 173
Cdd:pfam01494 82 RADLDF---LTSPPRVTVYPQTELEPILVEHAEARGaQVR--FGTEVLSLEQDGDGVTAVVRDRrDGEEYTVRAKYLVGC 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 174 DGGASFIRRTLNVPFEGkTAPNQWIVIDIANDPL--------ATPHVYLCCDP-----VRPYVSAALPHGVRRFEFMVMP 240
Cdd:pfam01494 157 DGGRSPVRKTLGIEFEG-FEGVPFGSLDVLFDAPdlsdpverAFVHYLIYAPHsrgfmVGPWRSAGRERYYVQVPWDEEV 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 241 GETEAQLSEPHNMRRLLSKVLPDPDRVELIRQRVYTHNARLAERFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAW 320
Cdd:pfam01494 236 EERPEEFTDEELKQRLRSIVGIDLALVEILWKSIWGVASRVATRYRKGRVFLAGDAAHIHPPTGGQGLNTAIQDAFNLAW 315
|
330 340 350
....*....|....*....|....*....|...
gi 556285258 321 KLALVVNGKAGEALLDSYQQERRDHAKAMIDLS 353
Cdd:pfam01494 316 KLAAVLRGQAGESLLDTYSAERLPVAWAVVDFA 348
|
|
| UbiH |
COG0654 |
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme ... |
13-386 |
3.33e-71 |
|
2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme transport and metabolism, Energy production and conversion]; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 440419 [Multi-domain] Cd Length: 326 Bit Score: 230.98 E-value: 3.33e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 13 QHTAQVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHTTPWHAMRFLT-P 91
Cdd:COG0654 1 MMRTDVLIVGGGPAGLALALALARAGIRVTVVERAPPPRPDGRGIALSPRSLELLRRLGLWDRLLARGAPIRGIRVRDgS 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 92 KGRCFADIQpmTDEFGWSRRNAFIQPQVDAVMYHGLQRFPqVRCLFSREVEAFSQSSDGVTLNIKgpDGerETVRADWLV 171
Cdd:COG0654 81 DGRVLARFD--AAETGLPAGLVVPRADLERALLEAARALG-VELRFGTEVTGLEQDADGVTVTLA--DG--RTLRADLVV 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 172 ACDGGASFIRRTLNVPFEGKTAPNQWIVIDIAndplatphvylccdpvrpyvsaalphgvrrfefmvmpgeteaqlsepH 251
Cdd:COG0654 154 GADGARSAVRRLLGIGFTGRDYPQRALWAGVR-----------------------------------------------T 186
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 252 NMRRLLSKVLPDPDRVELIRQR-VYTHNARLAERFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAWKLALVVNGKA 330
Cdd:COG0654 187 ELRARLAAAGPRLGELLELSPRsAFPLRRRRAERWRRGRVVLLGDAAHTMHPLGGQGANLALRDAAALAWKLAAALRGRD 266
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*.
gi 556285258 331 GEALLDSYQQERRDHAKAMIDLSVTAGHVLAPPKRWQGAARDGLSWLLNYLPPVKR 386
Cdd:COG0654 267 DEAALARYERERRPRAARVQRAADALGRLFHPDSPPLRLLRNAGLRLLDRLPPLKG 322
|
|
| PRK06184 |
PRK06184 |
hypothetical protein; Provisional |
13-544 |
5.43e-65 |
|
hypothetical protein; Provisional
Pssm-ID: 235728 [Multi-domain] Cd Length: 502 Bit Score: 219.86 E-value: 5.43e-65
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 13 QHTAQVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHTTPWHAMRFLTPK 92
Cdd:PRK06184 1 YTTTDVLIVGAGPTGLTLAIELARRGVSFRLIEKAPEPFPGSRGKGIQPRTQEVFDDLGVLDRVVAAGGLYPPMRIYRDD 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 93 GRC-----FADIQPMTDEfgwSRRNAFIQPQ--VDAVMYHGLQRFpQVRCLFSREVEAFSQSSDGVTLNIKGPDGErETV 165
Cdd:PRK06184 81 GSVaesdmFAHLEPTPDE---PYPLPLMVPQwrTERILRERLAEL-GHRVEFGCELVGFEQDADGVTARVAGPAGE-ETV 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 166 RADWLVACDGGASFIRRTLNVPFEGKT-APNQWIVIDIANDPLATPHVYLCCDPVRPYVSAALPHGVRRFEFM-VMPGET 243
Cdd:PRK06184 156 RARYLVGADGGRSFVRKALGIGFPGETlGIDRMLVADVSLTGLDRDAWHQWPDGDMGMIALCPLPGTDLFQIQaPLPPGG 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 244 EAQLSePHNMRRLLSKVLPDPD-RVELIR-QRVYTHNARLAERFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAWK 321
Cdd:PRK06184 236 EPDLS-ADGLTALLAERTGRTDiRLHSVTwASAFRMNARLADRYRVGRVFLAGDAAHVHPPAGGQGLNTSVQDAYNLGWK 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 322 LALVVNGkAGEALLDSYQQERRDHAKAMIDLSVtaghvlappKRWQGAA-------RDGLSWLLNY----LPPVKRyfle 390
Cdd:PRK06184 315 LAAVLAG-APEALLDTYEEERRPVAAAVLGLST---------ELLDAIKrgdmrrgRDVQQLDLGYrgssLAVDGP---- 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 391 mrfkpmpqYREGALLtdgAGKASPVGkmfiqPQVTLENGESLLLDEVIGANFAIIGWGcnpqwgldAGQIARWRAIGVRF 470
Cdd:PRK06184 381 --------ERTGGLR---AGDRAPDA-----PLLGAAGQPTRLFDLFRGPHWTLLAFG--------AGAAAILARRGLRI 436
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 556285258 471 IQVVPevqihreqdnAPGTLRVGDKQNRLKSWFAQHNTAIAVVRPDRFVAALAIPQTLGAqLTALAEKMTLAAG 544
Cdd:PRK06184 437 HRVGD----------AAEGGDLVDDAGHFRDAYGLTGGTLVLVRPDGYVGLIAAGDDAAA-LEAYLARVGLGRK 499
|
|
| PRK06126 |
PRK06126 |
hypothetical protein; Provisional |
15-357 |
2.35e-57 |
|
hypothetical protein; Provisional
Pssm-ID: 235704 [Multi-domain] Cd Length: 545 Bit Score: 200.60 E-value: 2.35e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 15 TAQVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDV----LPHTTP-------- 82
Cdd:PRK06126 7 ETPVLIVGGGPVGLALALDLGRRGVDSILVERKDGTAFNPKANTTSARSMEHFRRLGIADEVrsagLPVDYPtdiayftr 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 83 ---WHAMRFLTP--KGRCFADIQPMTDEFGWSRRNAFIQPQVDAVMYHGLQRFPQVRCLFSREVEAFSQSSDGVTLNIKG 157
Cdd:PRK06126 87 ltgYELARFRLPsaREAITPVGGPDGSWPSPELPHRIPQKYLEPILLEHAAAQPGVTLRYGHRLTDFEQDADGVTATVED 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 158 PD-GERETVRADWLVACDGGASFIRRTLNVPFEGKTA--PNQWIVIDIANDPLATPH----VYLCCDPVRPYVSAALpHG 230
Cdd:PRK06126 167 LDgGESLTIRADYLVGCDGARSAVRRSLGISYEGTSGlqRDLSIYIRAPGLAALVGHdpawMYWLFNPDRRGVLVAI-DG 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 231 VRRFEF-MVMPGETEAQLS--EPHNMRRLlskVLPDPDRVELIRQRVYTHNARLAERFRIDRVLLAGDAAHIMPVWQGQG 307
Cdd:PRK06126 246 RDEWLFhQLRGGEDEFTIDdvDARAFVRR---GVGEDIDYEVLSVVPWTGRRLVADSYRRGRVFLAGDAAHLFTPTGGYG 322
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556285258 308 YNSGMRDAFNLAWKLALVVNGKAGEALLDSYQQERR-----------DHAKAMIDLSVTAG 357
Cdd:PRK06126 323 MNTGIGDAVNLAWKLAAVLNGWAGPALLDSYEAERRpiaarntdyarRNADALGSFPVPPE 383
|
|
| PRK08132 |
PRK08132 |
FAD-dependent oxidoreductase; Provisional |
6-521 |
7.59e-54 |
|
FAD-dependent oxidoreductase; Provisional
Pssm-ID: 236158 [Multi-domain] Cd Length: 547 Bit Score: 191.23 E-value: 7.59e-54
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 6 PDIQPAVQHTAQVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHTTPWHA 85
Cdd:PRK08132 14 ADQDADDPARHPVVVVGAGPVGLALAIDLAQQGVPVVLLDDDDTLSTGSRAICFAKRSLEIFDRLGCGERMVDKGVSWNV 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 86 mrfltpkGRCFA--------DIQPMTDEfgwsRRNAFI---QPQVDAVMYHGLQRFPQVRCLFSREVEAFSQSSDGVTLN 154
Cdd:PRK08132 94 -------GKVFLrdeevyrfDLLPEPGH----RRPAFInlqQYYVEGYLVERAQALPNIDLRWKNKVTGLEQHDDGVTLT 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 155 IKGPDGErETVRADWLVACDGGASFIRRTLNVPFEGKTAPNQWIVIDIA-NDPLAT-------PhvylccdPVRPYVSAA 226
Cdd:PRK08132 163 VETPDGP-YTLEADWVIACDGARSPLREMLGLEFEGRTFEDRFLIADVKmKADFPTerwfwfdP-------PFHPGQSVL 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 227 L---PHGVRRFEFMVMPGETEAQLSEPHNMRRLLSKVLPDPDRVELIRQRVYTHNARLAERFRIDRVLLAGDAAHIMPVW 303
Cdd:PRK08132 235 LhrqPDNVWRIDFQLGWDADPEAEKKPENVIPRVRALLGEDVPFELEWVSVYTFQCRRMDRFRHGRVLFAGDAAHQVSPF 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 304 QGQGYNSGMRDAFNLAWKLALVVNGKAGEALLDSYQQERRDHAKAMIDLSVTAGHVLAPPKRWQGAARDGLSWLLNYLPP 383
Cdd:PRK08132 315 GARGANSGIQDADNLAWKLALVLRGRAPDSLLDSYASEREFAADENIRNSTRSTDFITPKSPVSRLFRDAVLRLARDHPF 394
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 384 VKRYFLEMRFKPMPQYREGALLT---DGAGKASPVGKMFIQPQVTLENGESLLLDEViGANFAIIGWGCNPQWGLDAGQI 460
Cdd:PRK08132 395 ARRLVNSGRLSVPAVYADSPLNTpdgDAFAGGPVPGAPAPDAPVRADGEPGWLLDLL-GGGFTLLLFGDDAAAAALLQAL 473
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556285258 461 ARwRAIGVRFIQVVPEVQIhreqdnAPGTLRVGDKQNRLKSWFAQHNTAIAVVRPDRFVAA 521
Cdd:PRK08132 474 AA-AALPVRVVAVVPAGAA------QAAAGVLEDADGLAAERYDARPGTVYLIRPDQHVAA 527
|
|
| PRK08244 |
PRK08244 |
monooxygenase; |
17-546 |
3.08e-44 |
|
monooxygenase;
Pssm-ID: 236199 [Multi-domain] Cd Length: 493 Bit Score: 163.76 E-value: 3.08e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 17 QVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHTTP---WHamrfltpkg 93
Cdd:PRK08244 4 EVIIIGGGPVGLMLASELALAGVKTCVIERLKETVPYSKALTLHPRTLEILDMRGLLERFLEKGRKlpsGH--------- 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 94 rcFADIQPMTDEFGWSRRNAF--IQPQVD---AVMYHGLQRFPQVRclfsREVEAFS--QSSDGVTLNIKGPDGEReTVR 166
Cdd:PRK08244 75 --FAGLDTRLDFSALDTSSNYtlFLPQAEtekVLEEHARSLGVEIF----RGAEVLAvrQDGDGVEVVVRGPDGLR-TLT 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 167 ADWLVACDGGASFIRRTLNVPFEGKTAPNQWIVIDIANDPLATPHVYLCCDPVRPYVSAALPHGVRRFeFMVMPGETEAQ 246
Cdd:PRK08244 148 SSYVVGADGAGSIVRKQAGIAFPGTDATFTAMLGDVVLKDPPPSSVLSLCTREGGVMIVPLSGGIYRV-LIIDPERPQVP 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 247 LSEP---HNMRRLLSKV------LPDPdrVELIRqrvYTHNARLAERFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFN 317
Cdd:PRK08244 227 KDEPvtlEELKTSLIRIcgtdfgLNDP--VWMSR---FGNATRQAERYRSGRIFLAGDAAHIHFPAGGQGLNVGLQDAMN 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 318 LAWKLALVVNGKAGEALLDSYQQERRDHAKAMIDlSVTAGHVLAPPKRWQGAARDGLSWLLNYlPPVKRYF------LEM 391
Cdd:PRK08244 302 LGWKLAAAIKGWAPDWLLDSYHAERHPVGTALLR-NTEVQTKLFDFTRPGLALRSMLSDLLGF-PEVNRYLagqisaLDV 379
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 392 RFKPMPQYREGALltdgagkaspVGKMFIQPQVTLENGESLLLDEVI-GANFAIIGWGCNPQwglDAGQIARWRAIGVRF 470
Cdd:PRK08244 380 HYEPDAEMPPHPL----------NGKRLPDLELTLSDGESERLYSLLhKGTFLLLSFGSEPQ---DWSRYPHVRVVRASL 446
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556285258 471 IQVVPEvqihreqdnapgtlrvgdkqnrlksWfaqHNTAIAVVRPDRFVaALAIPQTLGAQLTALAEKMTLAAGNT 546
Cdd:PRK08244 447 AEGRAD-------------------------W---NDVHTALIRPDGHV-AWAVDASDPNAEEAIAAGISRWCGVI 493
|
|
| PRK06834 |
PRK06834 |
hypothetical protein; Provisional |
17-391 |
7.14e-37 |
|
hypothetical protein; Provisional
Pssm-ID: 235870 [Multi-domain] Cd Length: 488 Bit Score: 142.85 E-value: 7.14e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 17 QVAIAGAGPVGLMMANYLGQMGISVLLVEK-LDKLIDYPRAIGIDDESLRAMQAVGLVDdvlphttpwhamRFLtPKGRC 95
Cdd:PRK06834 5 AVVIAGGGPTGLMLAGELALAGVDVAIVERrPNQELVGSRAGGLHARTLEVLDQRGIAD------------RFL-AQGQV 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 96 -----FADIQPMTDEFGwSRRN---AFIQPQVDAVMYHGLQRFPqVRCLFSREVEAFSQSSDGVTLNIKgpDGEreTVRA 167
Cdd:PRK06834 72 aqvtgFAATRLDISDFP-TRHNyglALWQNHIERILAEWVGELG-VPIYRGREVTGFAQDDTGVDVELS--DGR--TLRA 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 168 DWLVACDGGASFIRRTLNVPFEGKTAPNQWIVIDIAND---PLATPHvylccdpvrpyvSAALPHGVRRFEF------MV 238
Cdd:PRK06834 146 QYLVGCDGGRSLVRKAAGIDFPGWDPTTSYLIAEVEMTeepEWGVHR------------DALGIHAFGRLEDegpvrvMV 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 239 mpgeTEAQL---SEP--HNMRRLLSKV------LPDPDRVELirqrvYTHNARLAERFRIDRVLLAGDAAHIMPVWQGQG 307
Cdd:PRK06834 214 ----TEKQVgatGEPtlDDLREALIAVygtdygIHSPTWISR-----FTDMARQAASYRDGRVLLAGDAAHVHSPVGGQG 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 308 YNSGMRDAFNLAWKLALVVNGKAGEALLDSYQQERrdHAKAMIDLSVT-AGHVLAPPKRWQGAARDGLSWLLNYLPPVKR 386
Cdd:PRK06834 285 LNTGVQDAVNLGWKLAQVVKGTSPESLLDTYHAER--HPVAARVLRNTmAQVALLRPDDRTEALRDIVAELLGMDEPRKR 362
|
....*
gi 556285258 387 YFLEM 391
Cdd:PRK06834 363 IAAMM 367
|
|
| PRK07190 |
PRK07190 |
FAD-binding protein; |
13-353 |
1.07e-28 |
|
FAD-binding protein;
Pssm-ID: 235955 [Multi-domain] Cd Length: 487 Bit Score: 119.15 E-value: 1.07e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 13 QHTaQVAIAGAGPVGLMMAnYLGQM-GISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHTTP------WHA 85
Cdd:PRK07190 4 QVT-DVVIIGAGPVGLMCA-YLGQLcGLNTVIVDKSDGPLEVGRADALNARTLQLLELVDLFDELYPLGKPcntssvWAN 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 86 MRFLTPKGRCFadiqpmtDEFGWSRRNAFI---QPQVDAVMYHGLQRFPQVRCLfSREVEAFSQSSDGVTLNIKgpDGER 162
Cdd:PRK07190 82 GKFISRQSSWW-------EELEGCLHKHFLmlgQSYVEKLLDDKLKEAGAAVKR-NTSVVNIELNQAGCLTTLS--NGER 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 163 etVRADWLVACDGGASFIRRTLNVPFEGKTAPNQWIVID--IANDPLATPHVYLccdpVRPYVS--AALPHGVRRFEFMV 238
Cdd:PRK07190 152 --IQSRYVIGADGSRSFVRNHFNVPFEIIRPQIIWAVIDgvIDTDFPKVPEIIV----FQAETSdvAWIPREGEIDRFYV 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 239 MPGETEAQLSE----------PHNMRRllskvlpdpDRVELIRQrvYTHNARLAERFRI-DRVLLAGDAAHIMPVWQGQG 307
Cdd:PRK07190 226 RMDTKDFTLEQaiakinhamqPHRLGF---------KEIVWFSQ--FSVKESVAEHFFIqDRIFLAGDACHIHSVNGGQG 294
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 556285258 308 YNSGMRDAFNLAWKLALVVNGKAGEALLDSYQQERRDHAKAMIDLS 353
Cdd:PRK07190 295 LNTGLADAFNLIWKLNMVIHHGASPELLQSYEAERKPVAQGVIETS 340
|
|
| PRK08294 |
PRK08294 |
phenol 2-monooxygenase; Provisional |
6-419 |
2.01e-25 |
|
phenol 2-monooxygenase; Provisional
Pssm-ID: 236223 [Multi-domain] Cd Length: 634 Bit Score: 110.46 E-value: 2.01e-25
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 6 PDIQPAVQHTA----------QVAIAGAGPVGLMMANYLGQM-GISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVD 74
Cdd:PRK08294 13 PRIQPAAGRGInrpadlpdevDVLIVGCGPAGLTLAAQLSAFpDITTRIVERKPGRLELGQADGIACRTMEMFQAFGFAE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 75 DVLPHTTPWHAMRFLTPkgrcfADIQPMTdefgwSRRNAFIQPQVDavmyhGLQRFP-----QVRCL------------- 136
Cdd:PRK08294 93 RILKEAYWINETAFWKP-----DPADPST-----IVRTGRVQDTED-----GLSEFPhvivnQARVHdyfldvmrnsptr 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 137 ----FSREVEAFSQSSDG-----VTL-NIKGP-DGERETVRADWLVACDGGASFIRRTLNVPFEGKTAPNQWIVIDIand 205
Cdd:PRK08294 158 lepdYGREFVDLEVDEEGeypvtVTLrRTDGEhEGEEETVRAKYVVGCDGARSRVRKAIGRELRGDSANHAWGVMDV--- 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 206 pLAT---PHVYLCCdpvrpyvsaaLPHGVRRFEFMVMPgeteaqlSEPHNMRRL---LSKVLPDpDRV--------ELIR 271
Cdd:PRK08294 235 -LAVtdfPDIRLKC----------AIQSASEGSILLIP-------REGGYLVRLyvdLGEVPPD-ERVavrnttveEVIA 295
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 272 --QR----------------VYTHNARLAERF----------RIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAWKLA 323
Cdd:PRK08294 296 kaQRilhpytldvkevawwsVYEVGQRLTDRFddvpaeeagtRLPRVFIAGDACHTHSAKAGQGMNVSMQDGFNLGWKLA 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 324 LVVNGKAGEALLDSYQQERRDHAKAMIDLSVT-AGHVLAPPKRWQGAArdglswllnylPP-VKRYFLEM-RFKP--MPQ 398
Cdd:PRK08294 376 AVLSGRSPPELLHTYSAERQAIAQELIDFDREwSTMMAAPPKEGGGVD-----------PAeLQDYFVKHgRFTAgtATH 444
|
490 500
....*....|....*....|....*.
gi 556285258 399 YREgALLTDGAG-----KASPVGKMF 419
Cdd:PRK08294 445 YAP-SLLTGEAThqdlaTGFPIGKRF 469
|
|
| Ubi-OHases |
TIGR01988 |
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a ... |
18-389 |
1.03e-23 |
|
Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family; This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) making it difficult to ascribe a specific activity to each one. Eukaryotes appear to have only a single homolog in this subfamily (COQ6) which complements UbiH, but also possess a non-orthologous gene, COQ7 which complements UbiF. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 273913 [Multi-domain] Cd Length: 385 Bit Score: 103.05 E-value: 1.03e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLVEK------LDKLIDyPRAIGIDDESLRAMQAVGLVDDVLP-HTTPWHAMRFL- 89
Cdd:TIGR01988 2 IVIVGGGMVGLALALALARSGLKVALIEAtplpapADPGFD-NRVSALSAASIRLLEKLGVWDKIEPaRAQPIRDIHVSd 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 90 --TPKGRCFADIQPMTDEFGWSRRNAFIQpqvdAVMYHGLQRFPQVRCLFSREVEAFSQSSDGVTLNIKgpDGERetVRA 167
Cdd:TIGR01988 81 ggSFGALRFDADEIGLEALGYVVENRVLQ----QALWERLQELPNVTLLCPARVVELPRHSDHVELTLD--DGQQ--LRA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 168 DWLVACDGGASFIRRTLNVPFEGKtAPNQWIVidIANdplatphvylccdpvrpyVSAALPHGVRRFEFMvMPGETEAQL 247
Cdd:TIGR01988 153 RLLVGADGANSKVRQLAGIPTTGW-DYGQSAV--VAN------------------VKHERPHQGTAWERF-TPTGPLALL 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 248 -----------SEPHNMRRLLsKVLPDPDRVELIRQR---------------VYTHNARLAERFRIDRVLLAGDAAHIMP 301
Cdd:TIGR01988 211 plpdnrsslvwTLPPEEAERL-LALSDEEFLAELQRAfgsrlgaitlvgerhAFPLSLTHAKRYVAPRLALIGDAAHTIH 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 302 VWQGQGYNSGMRDAFNLAwklALVVNGKA-GE-----ALLDSYQQERRDHAKAMI---DLSVTAGHVLAPPKRwqgAARD 372
Cdd:TIGR01988 290 PLAGQGLNLGLRDVAALA---EVLEDARRrGEdigslRVLQRYERRRRFDNAAMLgatDGLNRLFSNDFPPLR---LLRN 363
|
410
....*....|....*...
gi 556285258 373 -GLsWLLNYLPPVKRYFL 389
Cdd:TIGR01988 364 lGL-RLLNNLPPLKNFIA 380
|
|
| PRK07364 |
PRK07364 |
FAD-dependent hydroxylase; |
18-343 |
3.52e-18 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236001 [Multi-domain] Cd Length: 415 Bit Score: 87.00 E-value: 3.52e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLVEK--LDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHTTPWHAMRfLT----P 91
Cdd:PRK07364 21 VAIVGGGIVGLTLAAALKDSGLRIALIEAqpAEAAAAKGQAYALSLLSARIFEGIGVWEKILPQIGKFRQIR-LSdadyP 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 92 KGRCFADIQPMTDEFGWSRRNAFIQpqvdAVMYHGLQRFPQVRCLFSREVEAFSQSSDGVTLNIKgPDGERETVRADWLV 171
Cdd:PRK07364 100 GVVKFQPTDLGTEALGYVGEHQVLL----EALQEFLQSCPNITWLCPAEVVSVEYQQDAATVTLE-IEGKQQTLQSKLVV 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 172 ACDGGASFIRRTLNVPFEGKTAPNQWIVIDIAndpLATPH---VYLCCDPVRPYvsAALPHGVRRFEFM-VMPGEtEAQ- 246
Cdd:PRK07364 175 AADGARSPIRQAAGIKTKGWKYWQSCVTATVK---HEAPHndiAYERFWPSGPF--AILPLPGNRCQIVwTAPHA-QAKa 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 247 ---LSEPHNMRRLLSKVLPDPDRVELI-RQRVYTHNARLAERFRIDRVLLAGDAAH-IMPVwQGQGYNSGMRDAFNLAWK 321
Cdd:PRK07364 249 llaLPEAEFLAELQQRYGDQLGKLELLgDRFLFPVQLMQSDRYVQHRLALVGDAAHcCHPV-GGQGLNLGIRDAAALAQV 327
|
330 340
....*....|....*....|....*..
gi 556285258 322 LALVVngKAGE-----ALLDSYQQERR 343
Cdd:PRK07364 328 LQTAH--QRGEdigslAVLKRYERWRK 352
|
|
| PRK07045 |
PRK07045 |
putative monooxygenase; Reviewed |
18-361 |
7.21e-14 |
|
putative monooxygenase; Reviewed
Pssm-ID: 136171 [Multi-domain] Cd Length: 388 Bit Score: 73.40 E-value: 7.21e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLVEKLDKlidyPRAIGIDD----ESLRAMQAVGLVDDVLPHT-TPWHAMRFltpk 92
Cdd:PRK07045 8 VLINGSGIAGVALAHLLGARGHSVTVVERAAR----NRAQNGADllkpSGIGVVRAMGLLDDVFAAGgLRRDAMRL---- 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 93 grcFADIQPMT--DEFGWSRRNAFIQ---PQVDAVMYHGLQRFPQVRCLFSREVEAFSQSSDGVTLNIKGPDGERetVRA 167
Cdd:PRK07045 80 ---YHDKELIAslDYRSASALGYFILipcEQLRRLLLAKLDGLPNVRLRFETSIERIERDADGTVTSVTLSDGER--VAP 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 168 DWLVACDGGASFIRR-TLNVPFEGKTAPNQWIVIDIAndplATPHVYLCCdpvRPYVSAA------LPHGVRRFEFMV-M 239
Cdd:PRK07045 155 TVLVGADGARSMIRDdVLRMPAERVPYATPMAFGTIA----LTDSVRECN---RLYVDSNqglayfYPIGDQATRLVVsF 227
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 240 PGETEAQL---SEPHNMRRLLSKVLPDpDRVELIRQRVYTHNARLA-------ERFRIDRVLLAGDAAHIMPVWQGQGYN 309
Cdd:PRK07045 228 PADEMQGYladTTRTKLLARLNEFVGD-ESADAMAAIGAGTAFPLIplgrmnlDRYHKRNVVLLGDAAHSIHPITGQGMN 306
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 556285258 310 SGMRDAFNLAWKLALVVNGK-AGEALLDSYQQERRDHAKAMIdlsvTAGHVLA 361
Cdd:PRK07045 307 LAIEDAGELGACLDLHLSGQiALADALERFERIRRPVNEAVI----SYGHALA 355
|
|
| PRK07494 |
PRK07494 |
UbiH/UbiF family hydroxylase; |
18-392 |
5.38e-12 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181001 [Multi-domain] Cd Length: 388 Bit Score: 67.62 E-value: 5.38e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLVeklDKLIDYP--RAIGIDDESLRAMQAVGLVDDVLPHTTPWHAMRFLTPKGRC 95
Cdd:PRK07494 10 IAVIGGGPAGLAAAIALARAGASVALV---APEPPYAdlRTTALLGPSIRFLERLGLWARLAPHAAPLQSMRIVDATGRL 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 96 F---------ADIQpmTDEFGWSRRNAFIQpqvdAVMYHGLQRFPQVRcLFSREVEAFSQSSDGVTLNIKgpDGerETVR 166
Cdd:PRK07494 87 IrapevrfraAEIG--EDAFGYNIPNWLLN----RALEARVAELPNIT-RFGDEAESVRPREDEVTVTLA--DG--TTLS 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 167 ADWLVACDGGASFIRRTLNVPFEGKTAPNQWIVIDIANdplATPHVYLCCD---PVRPYVSAALPHGVRRFEFMVMPGET 243
Cdd:PRK07494 156 ARLVVGADGRNSPVREAAGIGVRTWSYPQKALVLNFTH---SRPHQNVSTEfhtEGGPFTQVPLPGRRSSLVWVVRPAEA 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 244 EAQLSEP---------HNMRRLLSKVlpdpdRVELIRQrVYTHNARLAERFRIDRVLLAGDAAHIMPVWQGQGYNSGMRD 314
Cdd:PRK07494 233 ERLLALSdaalsaaieERMQSMLGKL-----TLEPGRQ-AWPLSGQVAHRFAAGRTALVGEAAHVFPPIGAQGLNLGLRD 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 315 AFNLAwKLALVVNGKAG-EALLDSYQQERRdhakAMIDLSVTAGHVL-------APPkrWQGAARDGLSwLLNYLPPVKR 386
Cdd:PRK07494 307 VATLV-EIVEDRPEDPGsAAVLAAYDRARR----PDILSRTASVDLLnrsllsdFLP--VQDLRAAGLH-LLYSFGPLRR 378
|
....*.
gi 556285258 387 YFleMR 392
Cdd:PRK07494 379 LF--MR 382
|
|
| PRK06185 |
PRK06185 |
FAD-dependent oxidoreductase; |
15-386 |
2.68e-11 |
|
FAD-dependent oxidoreductase;
Pssm-ID: 235729 [Multi-domain] Cd Length: 407 Bit Score: 65.65 E-value: 2.68e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 15 TAQVAIAGAGPVGLMMANYLGQMGISVLLVEK-LDKLIDYpRAIGIDDESLRAMQAVGLVDDVL--PHTTPwHAMRFLTP 91
Cdd:PRK06185 6 TTDCCIVGGGPAGMMLGLLLARAGVDVTVLEKhADFLRDF-RGDTVHPSTLELMDELGLLERFLelPHQKV-RTLRFEIG 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 92 KGRCF-ADiqpmtdeFGWSR-RNAFI--QPQVD--------AvmyhglQRFPQVRCLFSREVEAFSQSSDGVT-LNIKGP 158
Cdd:PRK06185 84 GRTVTlAD-------FSRLPtPYPYIamMPQWDfldflaeeA------SAYPNFTLRMGAEVTGLIEEGGRVTgVRARTP 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 159 DGEREtVRADWLVACDGGASFIRRTLNVPFEGKTAPnqwivIDI--------ANDPLATPH--------VYLccdPVRPY 222
Cdd:PRK06185 151 DGPGE-IRADLVVGADGRHSRVRALAGLEVREFGAP-----MDVlwfrlprePDDPESLMGrfgpgqglIMI---DRGDY 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 223 VSAAlphgvrrfefMVMPGETEAQLSEP--HNMRRLLSKVLPDP-DRVELIRQ---------RVythnARLaERFRIDRV 290
Cdd:PRK06185 222 WQCG----------YVIPKGGYAALRAAglEAFRERVAELAPELaDRVAELKSwddvklldvRV----DRL-RRWHRPGL 286
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 291 LLAGDAAHIM-PVwQGQGYNSGMRDAFNLAWKLA-LVVNGKAGEALLDSYQQERRDHAKAMIDLSVTAGHVLAPP--KRW 366
Cdd:PRK06185 287 LCIGDAAHAMsPV-GGVGINLAIQDAVAAANILAePLRRGRVSDRDLAAVQRRREFPTRVTQALQRRIQRRLLAPalAGR 365
|
410 420
....*....|....*....|
gi 556285258 367 QGAARDGLSWLLNYLPPVKR 386
Cdd:PRK06185 366 GPLGPPLLLRLLNRLPWLRR 385
|
|
| PRK08163 |
PRK08163 |
3-hydroxybenzoate 6-monooxygenase; |
15-343 |
1.37e-10 |
|
3-hydroxybenzoate 6-monooxygenase;
Pssm-ID: 181262 [Multi-domain] Cd Length: 396 Bit Score: 63.13 E-value: 1.37e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 15 TAQVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDdvlphttpwhAMRFLTpkgr 94
Cdd:PRK08163 4 VTPVLIVGGGIGGLAAALALARQGIKVKLLEQAAEIGEIGAGIQLGPNAFSALDALGVGE----------AARQRA---- 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 95 CFADIQPMTD----------EFGWSRRNAFIQP-------QVDAVMYHGLQRFPQVRCLFSREVEAFSQSSDGVTLNIKg 157
Cdd:PRK08163 70 VFTDHLTMMDavdaeevvriPTGQAFRARFGNPyavihraDIHLSLLEAVLDHPLVEFRTSTHVVGIEQDGDGVTVFDQ- 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 158 pDGERetVRADWLVACDGGASFIRRTLN---------------VPFEGKTAPNQWividiaNDPL--ATPHVYLCCDPVR 220
Cdd:PRK08163 149 -QGNR--WTGDALIGCDGVKSVVRQSLVgdaprvtghvvyravIDVDDMPEDLRI------NAPVlwAGPHCHLVHYPLR 219
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 221 ---PYVSAALPHGVRRFEFMVMPGETEAQLS-------EPHNMRRLLSK----VLPDPDRVElirqrvythnarlaeRFR 286
Cdd:PRK08163 220 ggeQYNLVVTFHSREQEEWGVKDGSKEEVLSyfegihpRPRQMLDKPTSwkrwATADREPVA---------------KWS 284
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 556285258 287 IDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAwkLALVVNGKAGEALLDSYQQERR 343
Cdd:PRK08163 285 TGRVTLLGDAAHPMTQYMAQGACMALEDAVTLG--KALEGCDGDAEAAFALYESVRI 339
|
|
| PRK07588 |
PRK07588 |
FAD-binding domain; |
17-400 |
2.34e-10 |
|
FAD-binding domain;
Pssm-ID: 169028 [Multi-domain] Cd Length: 391 Bit Score: 62.45 E-value: 2.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 17 QVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKL------IDYpRAIGIDdeslrAMQAVGLVDDVLPHTTPWHAMRFLT 90
Cdd:PRK07588 2 KVAISGAGIAGPTLAYWLRRYGHEPTLIERAPELrtggymVDF-WGVGYE-----VAKRMGITDQLREAGYQIEHVRSVD 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 91 PKGRCFAD------IQPMTDEFGWSRRNafiqpQVDAVMYHGLQrfPQVRCLFSREVEAFSQSSDGVTLNIkgpdgERET 164
Cdd:PRK07588 76 PTGRRKADlnvdsfRRMVGDDFTSLPRG-----DLAAAIYTAID--GQVETIFDDSIATIDEHRDGVRVTF-----ERGT 143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 165 VRA-DWLVACDGGASFIRRtlnvpfegktapnqwividIANDPLATPHVYLCC-------DPVRP-----YVSAALP-HG 230
Cdd:PRK07588 144 PRDfDLVIGADGLHSHVRR-------------------LVFGPERDFEHYLGCkvaacvvDGYRPrdertYVLYNEVgRQ 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 231 VRRF-----EFMVM-------PGETEAQLSEPHNMRRLLS----------KVLPDP-----DRVELIRQrvythnarlaE 283
Cdd:PRK07588 205 VARValrgdRTLFLfifraehDNPPLTPAEEKQLLRDQFGdvgwetpdilAALDDVedlyfDVVSQIRM----------D 274
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 284 RFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAWKLALvVNGKAGEAlLDSYQQERRDHAKAMIDLSVTAGHVLAPP 363
Cdd:PRK07588 275 RWSRGRVALVGDAAACPSLLGGEGSGLAITEAYVLAGELAR-AGGDHRRA-FDAYEKRLRPFIAGKQAAAAKFLSVFAPK 352
|
410 420 430 440
....*....|....*....|....*....|....*....|
gi 556285258 364 KRWQGAARDGLSWLLNyLPPVKRYFLEMRFK---PMPQYR 400
Cdd:PRK07588 353 TRFGLYVRNIAMKIMN-LPPVADFVGAGSFRddfELPEYE 391
|
|
| PRK09126 |
PRK09126 |
FAD-dependent hydroxylase; |
14-187 |
3.24e-10 |
|
FAD-dependent hydroxylase;
Pssm-ID: 236385 [Multi-domain] Cd Length: 392 Bit Score: 62.27 E-value: 3.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 14 HTAQVAIAGAGPVGLMMANYLGQMGISVLLVEK--LDKLIDYP---RAIGIDDESLRAMQAVGLVDDVLPH-TTPWHAMR 87
Cdd:PRK09126 2 MHSDIVVVGAGPAGLSFARSLAGSGLKVTLIERqpLAALADPAfdgREIALTHASREILQRLGAWDRIPEDeISPLRDAK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 88 FLT---PKGRCFADIQPMTDEFGW------SRRNAFiqpqvDAVmyhglQRFPQVRCLFSREVEAFSQSSDGVTLNIKgp 158
Cdd:PRK09126 82 VLNgrsPFALTFDARGRGADALGYlvpnhlIRRAAY-----EAV-----SQQDGIELLTGTRVTAVRTDDDGAQVTLA-- 149
|
170 180
....*....|....*....|....*....
gi 556285258 159 DGERetVRADWLVACDGGASFIRRTLNVP 187
Cdd:PRK09126 150 NGRR--LTARLLVAADSRFSATRRQLGIG 176
|
|
| PRK08773 |
PRK08773 |
UbiH/UbiF family hydroxylase; |
13-314 |
5.37e-10 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181552 [Multi-domain] Cd Length: 392 Bit Score: 61.42 E-value: 5.37e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 13 QHTAQVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKL---IDYP--RAIGIDDESLRAMQAVGLVDDVL-PHTTPWHAM 86
Cdd:PRK08773 4 RSRRDAVIVGGGVVGAACALALADAGLSVALVEGREPPrwqADQPdlRVYAFAADNAALLDRLGVWPAVRaARAQPYRRM 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 87 RFLTPKG---RCFADIQPMTDEFGWSRRNAFIQPQVDAVMYhglQRFPQVRClfSREVEAFSQSSDGVTLNIKgpDGERe 163
Cdd:PRK08773 84 RVWDAGGggeLGFDADTLGREQLGWIVENDLLVDRLWAALH---AAGVQLHC--PARVVALEQDADRVRLRLD--DGRR- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 164 tVRADWLVACDGGASFIRRTLNVPFEGKTAPNQWIVIDIANDPLATPHVYLCCDPVRPYvsAALPHGVRRFEFMVMPGET 243
Cdd:PRK08773 156 -LEAALAIAADGAASTLRELAGLPVSRHDYAQRGVVAFVDTEHPHQATAWQRFLPTGPL--ALLPFADGRSSIVWTLPDA 232
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556285258 244 EAQ----LSEPHNMRRLLSKVLPDPDRVELIRQRV-YTHNARLAERFRIDRVLLAGDAAHIMPVWQGQGYNSGMRD 314
Cdd:PRK08773 233 EAErvlaLDEAAFSRELTQAFAARLGEVRVASPRTaFPLRRQLVQQYVSGRVLTLGDAAHVVHPLAGQGVNLGLRD 308
|
|
| PRK06847 |
PRK06847 |
hypothetical protein; Provisional |
10-371 |
8.19e-10 |
|
hypothetical protein; Provisional
Pssm-ID: 235874 [Multi-domain] Cd Length: 375 Bit Score: 60.66 E-value: 8.19e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 10 PAVQHtaqVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHTTPWHAMRFL 89
Cdd:PRK06847 2 AAVKK---VLIVGGGIGGLSAAIALRRAGIAVDLVEIDPEWRVYGAGITLQGNALRALRELGVLDECLEAGFGFDGVDLF 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 90 TPKGRCFADI-QPmtdefgwsrrnAFIQPQVDAVMyhGLQR--FPQVRCLFSRE----------VEAFSQSSDGVTLNIK 156
Cdd:PRK06847 79 DPDGTLLAELpTP-----------RLAGDDLPGGG--GIMRpaLARILADAARAagadvrlgttVTAIEQDDDGVTVTFS 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 157 gpDGEREtvRADWLVACDGGASFIRRTL-----------------NVPF-EGKTAPNQWI--VIDIANDPLATPHVYLCC 216
Cdd:PRK06847 146 --DGTTG--RYDLVVGADGLYSKVRSLVfpdepepeytgqgvwraVLPRpAEVDRSLMYLgpTTKAGVVPLSEDLMYLFV 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 217 ---DPVRPYVS-AALPHGVRR----FEFMVMpGETEAQLSEPH--NMRRLLSKVLPDPdrvelirqrvyTHNArlaerfr 286
Cdd:PRK06847 222 tepRPDNPRIEpDTLAALLREllapFGGPVL-QELREQITDDAqvVYRPLETLLVPAP-----------WHRG------- 282
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 287 idRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAWKLAlvvNGKAGEALLDSYQQERRDHAKAMIDLSVTAGHVLAPPKRW 366
Cdd:PRK06847 283 --RVVLIGDAAHATTPHLAQGAGMAIEDAIVLAEELA---RHDSLEAALQAYYARRWERCRMVVEASARIGRIEIEGGDK 357
|
....*
gi 556285258 367 QGAAR 371
Cdd:PRK06847 358 AEHAG 362
|
|
| PRK08013 |
PRK08013 |
oxidoreductase; Provisional |
18-390 |
1.81e-09 |
|
oxidoreductase; Provisional
Pssm-ID: 236139 [Multi-domain] Cd Length: 400 Bit Score: 59.67 E-value: 1.81e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLVEK---LDKLIDYPRAI---GIDDESLRAMQAVGLVDDVLP-HTTPWHAMRFLT 90
Cdd:PRK08013 6 VVIAGGGMVGLAVACGLQGSGLRVAVLEQrvpEPLAADAPPALrvsAINAASEKLLTRLGVWQDILArRASCYHGMEVWD 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 91 PKGrcFADIQPMTDEFGWSRRNAFIQPQV-DAVMYHGLQRFPQVRCLFSREVE--AFSQSSDGVTLNikgpDGERETVRA 167
Cdd:PRK08013 86 KDS--FGRIAFDDQSMGYSHLGHIIENSViHYALWQKAQQSSDITLLAPAELQqvAWGENEAFLTLK----DGSMLTARL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 168 dwLVACDGGASFIRRTLNVPFEG------------KTA-PNQWIVIDI-------ANDPLATPHvyLCcdpvrPYVSAAL 227
Cdd:PRK08013 160 --VVGADGANSWLRNKADIPLTFwdyqhhalvatiRTEePHDAVARQVfhgdgilAFLPLSDPH--LC-----SIVWSLS 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 228 PHGVRRFEfmVMPGET-EAQLSEPHNMRRllskvlpdpDRVELIRQR-VYTHNARLAERFRIDRVLLAGDAAHIMPVWQG 305
Cdd:PRK08013 231 PEEAQRMQ--QAPEEEfNRALAIAFDNRL---------GLCELESERqVFPLTGRYARQFAAHRLALVGDAAHTIHPLAG 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 306 QGYNSGMRDAFNLAWKLA-LVVNGK-AGEAL-LDSYQQeRRDHAKAMIDLSVTAGHVL----APPKRWqgaARD-GLSwL 377
Cdd:PRK08013 300 QGVNLGFMDAAELIAELRrLHRQGKdIGQHLyLRRYER-SRKHSAALMLAGMQGFRDLfagnNPAKKL---LRDiGLK-L 374
|
410
....*....|...
gi 556285258 378 LNYLPPVKRYFLE 390
Cdd:PRK08013 375 ADTLPGVKPQLIR 387
|
|
| PRK07608 |
PRK07608 |
UbiH/UbiF family hydroxylase; |
13-390 |
2.01e-08 |
|
UbiH/UbiF family hydroxylase;
Pssm-ID: 181057 [Multi-domain] Cd Length: 388 Bit Score: 56.50 E-value: 2.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 13 QHTAQVAIAGAGPVGLMMANYLGQMGISVLLVE----KLDKLIDY-PRAIGIDDESLRAMQAVGlVDDVLPHT--TPWHA 85
Cdd:PRK07608 3 HMKFDVVVVGGGLVGASLALALAQSGLRVALLAprapPRPADDAWdSRVYAISPSSQAFLERLG-VWQALDAArlAPVYD 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 86 MR-FLTPKGRC-FADIQPMTDEFGWSRRNAFIQPQVDAvmyhGLQRFPQVRcLFSREVEAFSQSSDGVTLNIKgpDGERe 163
Cdd:PRK07608 82 MRvFGDAHARLhFSAYQAGVPQLAWIVESSLIERALWA----ALRFQPNLT-WFPARAQGLEVDPDAATLTLA--DGQV- 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 164 tVRADWLVACDGGASFIR-----RTLNVPFE--------------GKTApNQWIVID--IANDPLATPHVYLCCdpvrpy 222
Cdd:PRK07608 154 -LRADLVVGADGAHSWVRsqagiKAERRPYRqtgvvanfkaerphRGTA-YQWFRDDgiLALLPLPDGHVSMVW------ 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 223 vSAALPHGVrrfEFMVMPGETEAQLSEPHNMRRL--LSKVLPdPDRVELIRQRVythnarlaERFRIDRVLLAGDAAHIM 300
Cdd:PRK07608 226 -SARTAHAD---ELLALSPEALAARVERASGGRLgrLECVTP-AAGFPLRLQRV--------DRLVAPRVALVGDAAHLI 292
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 301 PVWQGQGYNSGMRDAFnlawKLALVVNGKAG------EALLDSYQQERRDHAKAMidlsVTAGHVLappKRWQGAARDGL 374
Cdd:PRK07608 293 HPLAGQGMNLGLRDVA----ALADVLAGREPfrdlgdLRLLRRYERARREDILAL----QVATDGL---QRLFALPGPLA 361
|
410 420
....*....|....*....|...
gi 556285258 375 SWLLNY-------LPPVKRYFLE 390
Cdd:PRK07608 362 RWLRNAgmalvgaLPLVKRWLVR 384
|
|
| PRK05732 |
PRK05732 |
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated |
18-389 |
1.25e-07 |
|
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Pssm-ID: 235584 [Multi-domain] Cd Length: 395 Bit Score: 54.09 E-value: 1.25e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 18 VAIAGAGPVGLMMA---NYLGQMGISVLLVEKLDKLIDYP-----RAIGIDDESLRAMQAVGLVDDVLPHTTPW---HAM 86
Cdd:PRK05732 6 VIIVGGGMAGATLAlalSRLSHGGLPVALIEAFAPESDAHpgfdaRAIALAAGTCQQLARLGVWQALADCATPIthiHVS 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 87 RfltpKGRC-FADIQPMT---DEFGWSRRNAfiqpQVDAVMYHGLQRFPQVRCLFSREVEAFSQSSDGVTLNIKgpDGER 162
Cdd:PRK05732 86 D----RGHAgFVRLDAEDygvPALGYVVELH----DVGQRLFALLDKAPGVTLHCPARVANVERTQGSVRVTLD--DGET 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 163 etVRADWLVACDGGASFIRRTLNVPFEgKTAPNQWIVIdiANdplatphvylccdpvrpyVSAALPHGVRRFE------- 235
Cdd:PRK05732 156 --LTGRLLVAADGSHSALREALGIDWQ-QHPYEQVAVI--AN------------------VTTSEAHQGRAFErftehgp 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 236 --FMVMPG--------------ETEAQLSEPHNMRRL-------LSKVLPdpdrvelIRQR-VYTHNARLAERFRIDRVL 291
Cdd:PRK05732 213 laLLPMSDgrcslvwchpledaEEVLSWSDAQFLAELqqafgwrLGRITH-------AGKRsAYPLALVTAAQQISHRLA 285
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 292 LAGDAAH-IMPVwQGQGYNSGMRDAFNLAWKLALVVNGKA--GE-ALLDSYQQERRDHAKAMIDLSVTAGHVLAPPKRWQ 367
Cdd:PRK05732 286 LVGNAAQtLHPI-AGQGFNLGLRDVMSLAETLTQALARGEdiGDyAVLQRYQQRRQQDREATIGFTDGLVRLFANRWAPL 364
|
410 420
....*....|....*....|...
gi 556285258 368 GAARD-GLsWLLNYLPPVKRYFL 389
Cdd:PRK05732 365 VVGRNlGL-MAMDLLPPARDWLA 386
|
|
| PRK06753 |
PRK06753 |
hypothetical protein; Provisional |
18-357 |
1.83e-07 |
|
hypothetical protein; Provisional
Pssm-ID: 168661 [Multi-domain] Cd Length: 373 Bit Score: 53.54 E-value: 1.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHTTPWHAMRFLTPKGRCF- 96
Cdd:PRK06753 3 IAIIGAGIGGLTAAALLQEQGHEVKVFEKNESVKEVGAGIGIGDNVIKKLGNHDLAKGIKNAGQILSTMNLLDDKGTLLn 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 97 -ADIQPMTDEFGWSRRN--AFIQPQVDAVMYHglqrfpqvrclFSREVEAFSQSSDGVTlnIKGPDGERETvrADWLVAC 173
Cdd:PRK06753 83 kVKLKSNTLNVTLHRQTliDIIKSYVKEDAIF-----------TGKEVTKIENETDKVT--IHFADGESEA--FDLCIGA 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 174 DGGASFIRRTLN----------VPFEGKTAPNQWIVIDIAND-----------PLATPHVY--LCC-----DPvrPYVSA 225
Cdd:PRK06753 148 DGIHSKVRQSVNadskvryqgyTCFRGLIDDIDLKLPDCAKEywgtkgrfgivPLLNNQAYwfITInakerDP--KYSSF 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 226 ALPHGVRRFEfmvmpgeteaqlSEPHNMRRLLSKVLPDPdrveLIRQRVYthNARLAERFRIDRVLLAGDAAHIMPVWQG 305
Cdd:PRK06753 226 GKPHLQAYFN------------HYPNEVREILDKQSETG----ILHHDIY--DLKPLKSFVYGRIVLLGDAAHATTPNMG 287
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 556285258 306 QGYNSGMRDAFNLAWKLalvvNGKAGEALLDSYQQERRDHAKAMIDLSVTAG 357
Cdd:PRK06753 288 QGAGQAMEDAIVLANCL----NAYDFEKALQRYDKIRVKHTAKVIKRSRKIG 335
|
|
| FixC |
COG0644 |
Dehydrogenase (flavoprotein) [Energy production and conversion]; |
23-199 |
4.84e-07 |
|
Dehydrogenase (flavoprotein) [Energy production and conversion];
Pssm-ID: 440409 [Multi-domain] Cd Length: 281 Bit Score: 51.51 E-value: 4.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 23 AGPVGLMMANYLGQMGISVLLVEKLDKLIDYPRAIGIDDESLRAMQAVGLVDDVLPHTTpwhAMRFLTPKGRCfADIQPm 102
Cdd:COG0644 1 AGPAGSAAARRLARAGLSVLLLEKGSFPGDKICGGGLLPRALEELEPLGLDEPLERPVR---GARFYSPGGKS-VELPP- 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 103 TDEFGWS-RRNAFIQPQVDAVMYHGlqrfpqVRCLFSREVEAFSQSSDGVTLNIKGPdgerETVRADWLVACDGGASFIR 181
Cdd:COG0644 76 GRGGGYVvDRARFDRWLAEQAEEAG------AEVRTGTRVTDVLRDDGRVVVRTGDG----EEIRADYVVDADGARSLLA 145
|
170
....*....|....*...
gi 556285258 182 RTLNVPfEGKTAPNQWIV 199
Cdd:COG0644 146 RKLGLK-RRSDEPQDYAL 162
|
|
| PRK07333 |
PRK07333 |
ubiquinone biosynthesis hydroxylase; |
18-409 |
6.33e-07 |
|
ubiquinone biosynthesis hydroxylase;
Pssm-ID: 180935 [Multi-domain] Cd Length: 403 Bit Score: 51.90 E-value: 6.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 18 VAIAGAGPVGLMMANYLGQMG--ISVLLVEKLDKLI--DYPRAIGIDDESLRAMQAVGLVDDVLPHTTPWHAM------- 86
Cdd:PRK07333 4 VVIAGGGYVGLALAVALKQAAphLPVTVVDAAPAGAwsRDPRASAIAAAARRMLEALGVWDEIAPEAQPITDMvitdsrt 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 87 ------RFLTPKGrcfaDIQPmTDEFGWSRRNAFIqpqVDAVmyHGLQRFPQVRCLFSREVEAFSQSSDGVTLNIkgpdG 160
Cdd:PRK07333 84 sdpvrpVFLTFEG----EVEP-GEPFAHMVENRVL---INAL--RKRAEALGIDLREATSVTDFETRDEGVTVTL----S 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 161 ERETVRADWLVACDGGASFIR-----RTLNVPFeGKTApnqwIVIDIANDplaTPHV------YLccdPVRPYvsAALPH 229
Cdd:PRK07333 150 DGSVLEARLLVAADGARSKLRelagiKTVGWDY-GQSG----IVCTVEHE---RPHGgraeehFL---PAGPF--AILPL 216
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 230 GVRRFEFMVMPGETEAQ--LSEPHNM------RRL---LSKVLPDPDRvelirqRVYTHNARLAERFRIDRVLLAGDAAH 298
Cdd:PRK07333 217 KGNRSSLVWTERTADAErlVALDDLVfeaeleQRFghrLGELKVLGKR------RAFPLGLTLARSFVAPRFALVGDAAH 290
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 299 -IMPVwQGQGYNSGMRDAFNLAWklALVVNGKAGE-----ALLDSYQQERRDHAKAMidlsVTAGHVL-------APPKR 365
Cdd:PRK07333 291 gIHPI-AGQGLNLGLKDVAALAE--VVVEAARLGLdigslDVLERYQRWRRFDTVRM----GVTTDVLnrlfsndSTLLR 363
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 556285258 366 wqgAARD-GLSwLLNYLPPVKRYFLemrfkpmpqyREGALLTDGA 409
Cdd:PRK07333 364 ---SVRDiGLG-LVDRLPKLKSFFI----------RQAAGLTGDT 394
|
|
| PRK08850 |
PRK08850 |
2-octaprenyl-6-methoxyphenol hydroxylase; Validated |
18-350 |
2.63e-05 |
|
2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Pssm-ID: 236341 [Multi-domain] Cd Length: 405 Bit Score: 46.69 E-value: 2.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLVE------KLDKLIDYpRAIGIDDESLRAMQAVGLVDDVLP-HTTPWHAMRFLT 90
Cdd:PRK08850 7 VAIIGGGMVGLALAAALKESDLRIAVIEgqlpeeALNELPDV-RVSALSRSSEHILRNLGAWQGIEArRAAPYIAMEVWE 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 91 PK--GRCFADIQPMTD-EFGWSRRNAFIQ-PQVDAVM-YHGLQRFPQVRC--LFSREVEAFSQSSDGVTLNIKgpdgere 163
Cdd:PRK08850 86 QDsfARIEFDAESMAQpDLGHIVENRVIQlALLEQVQkQDNVTLLMPARCqsIAVGESEAWLTLDNGQALTAK------- 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 164 tvradWLVACDGGASFIRRTLNVPFEGKTAPNQWIVidiANDPLATPHVYLCCDPVRPYVSAA-LPHG------------ 230
Cdd:PRK08850 159 -----LVVGADGANSWLRRQMDIPLTHWDYGHSALV---ANVRTVDPHNSVARQIFTPQGPLAfLPMSepnmssivwste 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 231 -VRRFEFMVMPGET-EAQLSEPHNMRRLLSKVLPDPDRVELirqrvythNARLAERFRIDRVLLAGDAAHIMPVWQGQGY 308
Cdd:PRK08850 231 pLRAEALLAMSDEQfNKALTAEFDNRLGLCEVVGERQAFPL--------KMRYARDFVRERVALVGDAAHTIHPLAGQGV 302
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 556285258 309 NSGMRDAFNLAWK-LALVVNGK--AGEALLDSYQQERRDHAKAMI 350
Cdd:PRK08850 303 NLGLLDAASLAQEiLALWQQGRdiGLKRNLRGYERWRKAEAAKMI 347
|
|
| COQ6 |
TIGR01989 |
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase ... |
282-389 |
2.80e-05 |
|
ubiquinone biosynthesis monooxygenase COQ6; This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Pssm-ID: 273914 [Multi-domain] Cd Length: 437 Bit Score: 46.67 E-value: 2.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 282 AERFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDAFNLAWKLALVV-NGK--AGEALLDSYQQERRDHAKAM---IDLSVT 355
Cdd:TIGR01989 327 ADEYVTKRVALVGDAAHRVHPLAGQGVNLGFGDVASLVKALAEAVsVGAdiGSISSLKPYERERYAKNVVLlglVDKLHK 406
|
90 100 110
....*....|....*....|....*....|....*
gi 556285258 356 AGHVLAPPKRwqgAARD-GLSwLLNYLPPVKRYFL 389
Cdd:TIGR01989 407 LYATDFPPVV---ALRTfGLN-LTNYIGPLKNFIM 437
|
|
| PRK07236 |
PRK07236 |
hypothetical protein; Provisional |
18-184 |
1.48e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235980 [Multi-domain] Cd Length: 386 Bit Score: 44.14 E-value: 1.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLVEKLDKLIDyPRAIGI--DDESLRAMQAVGlVDDVLPHTTPWHAMRFLTPKGRC 95
Cdd:PRK07236 9 AVVIGGSLGGLFAALLLRRAGWDVDVFERSPTELD-GRGAGIvlQPELLRALAEAG-VALPADIGVPSRERIYLDRDGRV 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 96 FADiQPMTDEF-GWSRrnafiqpqvdavMYHGLQR-FPQVRCLFSREVEAFSQSSDGVTLNIKgpDGEREtvRADWLVAC 173
Cdd:PRK07236 87 VQR-RPMPQTQtSWNV------------LYRALRAaFPAERYHLGETLVGFEQDGDRVTARFA--DGRRE--TADLLVGA 149
|
170
....*....|.
gi 556285258 174 DGGASFIRRTL 184
Cdd:PRK07236 150 DGGRSTVRAQL 160
|
|
| PRK08243 |
PRK08243 |
4-hydroxybenzoate 3-monooxygenase; Validated |
17-338 |
9.24e-04 |
|
4-hydroxybenzoate 3-monooxygenase; Validated
Pssm-ID: 236198 [Multi-domain] Cd Length: 392 Bit Score: 41.71 E-value: 9.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 17 QVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKliDY----PRAiGIDDE-SLRAMQAVGlVDDVLPHTTPWHA---MRF 88
Cdd:PRK08243 4 QVAIIGAGPAGLLLGQLLHLAGIDSVVLERRSR--EYvegrIRA-GVLEQgTVDLLREAG-VGERMDREGLVHDgieLRF 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 89 ltpKGRCF-ADIQPMTDefGwsrRNAFIQPQ-------VDAVMYHGLQRFPQVRCLfsrEVEAFSQSSDGVTLNikgPDG 160
Cdd:PRK08243 80 ---DGRRHrIDLTELTG--G---RAVTVYGQtevtrdlMAARLAAGGPIRFEASDV---ALHDFDSDRPYVTYE---KDG 145
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 161 ERETVRADWLVACDG--GASfiRRTlnVP------FEgKTAPNQWIVIdiandpLA-TPhvylccdPVRP-YVSAALPHG 230
Cdd:PRK08243 146 EEHRLDCDFIAGCDGfhGVS--RAS--IPagalrtFE-RVYPFGWLGI------LAeAP-------PVSDeLIYANHERG 207
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 231 ----------VRRFEFMVMPGETEAQLSEphnmRRL---LSKVLPDPDRVELIRQRVYTHN-ARL----AERFRIDRVLL 292
Cdd:PRK08243 208 falcsmrsptRSRYYLQCPLDDKVEDWSD----ERFwdeLRRRLPPEDAERLVTGPSIEKSiAPLrsfvAEPMQYGRLFL 283
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 556285258 293 AGDAAHIMPVWQGQGYNSGMRDAFNLAWKLALVVNGKAgEALLDSY 338
Cdd:PRK08243 284 AGDAAHIVPPTGAKGLNLAASDVRYLARALVEFYREGD-TALLDAY 328
|
|
| YhiN |
COG2081 |
Predicted flavoprotein YhiN [General function prediction only]; |
19-50 |
1.08e-03 |
|
Predicted flavoprotein YhiN [General function prediction only];
Pssm-ID: 441684 [Multi-domain] Cd Length: 402 Bit Score: 41.57 E-value: 1.08e-03
10 20 30
....*....|....*....|....*....|..
gi 556285258 19 AIAGAGPVGLMMANYLGQMGISVLLVEKLDKL 50
Cdd:COG2081 1 IVIGAGAAGLMAAITAAERGARVLLLEKNPKV 32
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
18-50 |
1.20e-03 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 41.34 E-value: 1.20e-03
10 20 30
....*....|....*....|....*....|...
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLVEKLDKL 50
Cdd:COG0446 127 AVVIGGGPIGLELAEALRKRGLKVTLVERAPRL 159
|
|
| PRK06996 |
PRK06996 |
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase; |
1-385 |
3.70e-03 |
|
UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase;
Pssm-ID: 235905 [Multi-domain] Cd Length: 398 Bit Score: 39.67 E-value: 3.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 1 MTTSTPDIQPAVQhtaqVAIAGAGPVGLMMANYL----GQMGISVLLVEKLDKL--IDYPRAIGIDD------ESLRAMQ 68
Cdd:PRK06996 1 MTTAASMAAPDFD----IAIVGAGPVGLALAGWLarrsATRALSIALIDAREPAasANDPRAIALSHgsrvllETLGAWP 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 69 AvglvddvlPHTTPWHAmrFLTPKGRcfadiqpmtdeFGWS--RRNAFIQPQVDAVMYHG---------LQRFPqVRCLF 137
Cdd:PRK06996 77 A--------DATPIEHI--HVSQRGH-----------FGRTliDRDDHDVPALGYVVRYGslvaalaraVRGTP-VRWLT 134
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 138 SREVEAFSQSSDGVTLNIKGPDGEReTVRADWLVACDGGASFIRRTLNVPFEGKTAPNQWIVIDIANDPLATPHV----Y 213
Cdd:PRK06996 135 STTAHAPAQDADGVTLALGTPQGAR-TLRARIAVQAEGGLFHDQKADAGDSARRRDYGQTAIVGTVTVSAPRPGWawerF 213
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 214 LCCDPVrpyvsAALPHGVRRfefmvMPGETEAQLSEPHNMRRLLSkvLPDP-----------DRVELIRQRVYTHNARL- 281
Cdd:PRK06996 214 THEGPL-----ALLPLGGPR-----QADYALVWCCAPDEAARRAA--LPDDaflaelgaafgTRMGRFTRIAGRHAFPLg 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 282 --AERFRID-RVLLAGDAAH-IMPVwQGQGYNSGMRDAFNLAWKLAlvvNGKAGEALLDSYQQERRDHAKAMIDLSVTAG 357
Cdd:PRK06996 282 lnAARTLVNgRIAAVGNAAQtLHPV-AGQGLNLGLRDAHTLADALS---DHGATPLALATFAARRALDRRVTIGATDLLP 357
|
410 420
....*....|....*....|....*....
gi 556285258 358 HVLAPPKRWQGAARdGLSWL-LNYLPPVK 385
Cdd:PRK06996 358 RLFTVDSRPLAHLR-GAALTaLEFVPPLK 385
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
18-50 |
3.87e-03 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 36.41 E-value: 3.87e-03
10 20 30
....*....|....*....|....*....|...
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLVEKLDKL 50
Cdd:pfam00070 2 VVVVGGGYIGLELAGALARLGSKVTVVERRDRL 34
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
18-46 |
3.98e-03 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 39.33 E-value: 3.98e-03
10 20
....*....|....*....|....*....
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLVEK 46
Cdd:COG0492 3 VVIIGAGPAGLTAAIYAARAGLKTLVIEG 31
|
|
| PRK06617 |
PRK06617 |
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated |
279-353 |
4.64e-03 |
|
2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Pssm-ID: 168629 [Multi-domain] Cd Length: 374 Bit Score: 39.52 E-value: 4.64e-03
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 556285258 279 ARLAERFRIDRVLLAGDAAHIMPVWQGQGYNSGMRDafnlAWKLALVVngkAGEALLDSYQQERRDHAKAMIDLS 353
Cdd:PRK06617 264 ARIANRYFHNRIVLIADTAHTVHPLAGQGLNQGIKD----IEILSMIV---SNNGTLQEYQKLRQEDNFIMYKLT 331
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
17-50 |
8.98e-03 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 38.72 E-value: 8.98e-03
10 20 30
....*....|....*....|....*....|....
gi 556285258 17 QVAIAGAGPVGLMMANYLGQMGISVLLVEKLDKL 50
Cdd:pfam03486 2 DVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKL 35
|
|
| MDR |
cd05188 |
Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; ... |
18-95 |
9.98e-03 |
|
Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc.
Pssm-ID: 176178 [Multi-domain] Cd Length: 271 Bit Score: 38.07 E-value: 9.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556285258 18 VAIAGAGPVGLMMANYLGQMGISVLLV----EKLDKLIDYPRAIGID-----DESLRAMQAVGLVD---DVLPHTTPW-H 84
Cdd:cd05188 138 VLVLGAGGVGLLAAQLAKAAGARVIVTdrsdEKLELAKELGADHVIDykeedLEEELRLTGGGGADvviDAVGGPETLaQ 217
|
90
....*....|.
gi 556285258 85 AMRFLTPKGRC 95
Cdd:cd05188 218 ALRLLRPGGRI 228
|
|
| |
