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Conserved domains on  [gi|556286778|ref|WP_023290347|]
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MULTISPECIES: nitrogen fixation protein NifZ [Klebsiella]

Protein Classification

nitrogen fixation protein NifZ( domain architecture ID 10515852)

nitrogen fixation protein NifZ specifically is required for the formation of the second P-cluster of the nitrogenase MoFe protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NifZ pfam04319
NifZ domain; This short protein is found in the nif (nitrogen fixation) operon. Its function ...
 5-73 2.91e-33

NifZ domain; This short protein is found in the nif (nitrogen fixation) operon. Its function is unknown but is probably involved in nitrogen fixation or regulating some component of this process. This 75 residue region is presumed to be a domain. It is found in isolation in some members and in the amino terminal half of the longer NifZ proteins.


:

Pssm-ID: 427863  Cd Length: 70  Bit Score: 111.79  E-value: 2.91e-33
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 556286778    5 FTFSEAVRVVRAIRNDGTYAGLPSGALLVRRGSIGYVRDWGVFLQDQVIYQVHFPESDRIVGCREQELI 73
Cdd:pfam04319   2 FEWGQKVRARKDIRNDGTFPGKEIGELLVRKGDVGYVVSVGTFLQNQYIYAVHFLEEGRVVGCREEELE 70
 
Name Accession Description Interval E-value
NifZ pfam04319
NifZ domain; This short protein is found in the nif (nitrogen fixation) operon. Its function ...
 5-73 2.91e-33

NifZ domain; This short protein is found in the nif (nitrogen fixation) operon. Its function is unknown but is probably involved in nitrogen fixation or regulating some component of this process. This 75 residue region is presumed to be a domain. It is found in isolation in some members and in the amino terminal half of the longer NifZ proteins.


Pssm-ID: 427863  Cd Length: 70  Bit Score: 111.79  E-value: 2.91e-33
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 556286778    5 FTFSEAVRVVRAIRNDGTYAGLPSGALLVRRGSIGYVRDWGVFLQDQVIYQVHFPESDRIVGCREQELI 73
Cdd:pfam04319   2 FEWGQKVRARKDIRNDGTFPGKEIGELLVRKGDVGYVVSVGTFLQNQYIYAVHFLEEGRVVGCREEELE 70
 
Name Accession Description Interval E-value
NifZ pfam04319
NifZ domain; This short protein is found in the nif (nitrogen fixation) operon. Its function ...
 5-73 2.91e-33

NifZ domain; This short protein is found in the nif (nitrogen fixation) operon. Its function is unknown but is probably involved in nitrogen fixation or regulating some component of this process. This 75 residue region is presumed to be a domain. It is found in isolation in some members and in the amino terminal half of the longer NifZ proteins.


Pssm-ID: 427863  Cd Length: 70  Bit Score: 111.79  E-value: 2.91e-33
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 556286778    5 FTFSEAVRVVRAIRNDGTYAGLPSGALLVRRGSIGYVRDWGVFLQDQVIYQVHFPESDRIVGCREQELI 73
Cdd:pfam04319   2 FEWGQKVRARKDIRNDGTFPGKEIGELLVRKGDVGYVVSVGTFLQNQYIYAVHFLEEGRVVGCREEELE 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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