NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|556315303|ref|WP_023294822|]
View 

MULTISPECIES: L-ribulose-5-phosphate 4-epimerase [Enterobacter]

Protein Classification

L-ribulose-5-phosphate 4-epimerase( domain architecture ID 10793637)

L-ribulose-5-phosphate 4-epimerase catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5-phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction)

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
sgbE PRK12347
L-ribulose-5-phosphate 4-epimerase; Reviewed
1-231 3.17e-180

L-ribulose-5-phosphate 4-epimerase; Reviewed


:

Pssm-ID: 183459  Cd Length: 231  Bit Score: 492.80  E-value: 3.17e-180
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   1 MLDELKAEVLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIATGQVVEGNKKPSSDTPTH 80
Cdd:PRK12347   1 MLEQLKADVLAANLALPAHHLVTFTWGNVSAVDETRQLMVIKPSGVEYDVMTADDMVVVEIASGKVVEGSKKPSSDTPTH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLMTSAEIAGEYEYQTGEVIIKTFEERDLSP 160
Cdd:PRK12347  81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGAIPCTRLMTAEEINGEYEYQTGEVIIETFEERGISP 160
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556315303 161 MQIPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPVMQQELLDKHYLRKHGANAYYGQ 231
Cdd:PRK12347 161 AQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLDKHYLRKHGANAYYGQ 231
 
Name Accession Description Interval E-value
sgbE PRK12347
L-ribulose-5-phosphate 4-epimerase; Reviewed
1-231 3.17e-180

L-ribulose-5-phosphate 4-epimerase; Reviewed


Pssm-ID: 183459  Cd Length: 231  Bit Score: 492.80  E-value: 3.17e-180
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   1 MLDELKAEVLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIATGQVVEGNKKPSSDTPTH 80
Cdd:PRK12347   1 MLEQLKADVLAANLALPAHHLVTFTWGNVSAVDETRQLMVIKPSGVEYDVMTADDMVVVEIASGKVVEGSKKPSSDTPTH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLMTSAEIAGEYEYQTGEVIIKTFEERDLSP 160
Cdd:PRK12347  81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGAIPCTRLMTAEEINGEYEYQTGEVIIETFEERGISP 160
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556315303 161 MQIPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPVMQQELLDKHYLRKHGANAYYGQ 231
Cdd:PRK12347 161 AQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLDKHYLRKHGANAYYGQ 231
araD TIGR00760
L-ribulose-5-phosphate 4-epimerase; E. coli has two genes, sgaE and sgbE (YiaS), that are very ...
1-231 2.11e-165

L-ribulose-5-phosphate 4-epimerase; E. coli has two genes, sgaE and sgbE (YiaS), that are very close homologs of araD, the established L-ribulose-5-phosphate 4-epimerase of E. coli. SgbE, part of an operon for L-xylulose metabolism, also has L-ribulose-5-phosphate 4-epimerase activity; L-xylulose-5-phosphate may be converted into L-ribulose-5-phosphate by another product of that operon. The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD. [Energy metabolism, Sugars]


Pssm-ID: 129843  Cd Length: 231  Bit Score: 455.44  E-value: 2.11e-165
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303    1 MLDELKAEVLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIATGQVVEGNKKPSSDTPTH 80
Cdd:TIGR00760   1 MLEQLKKEVLEANLALPKHQLVTFTWGNVSAIDRERGLVVIKPSGVEYDVMTADDMVVVDLETGNVVEGSKKPSSDTPTH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLMTSAEIAGEYEYQTGEVIIKTFEERDLSP 160
Cdd:TIGR00760  81 LALYRAFPSIGGIVHTHSRHATIWAQAGKDIPALGTTHADYFYGTIPCTRPMTDEEINGEYELETGKVIVETFEKRGIDP 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556315303  161 MQIPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPVMQQELLDKHYLRKHGANAYYGQ 231
Cdd:TIGR00760 161 AQIPGVLVHSHGPFAWGKDAANAVHNAVVLEEVAYMALFSRQLNPQLPPMQQTLLDKHYLRKHGANAYYGQ 231
Aldolase_II cd00398
Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes ...
4-223 5.72e-95

Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.


Pssm-ID: 238232 [Multi-domain]  Cd Length: 209  Bit Score: 276.55  E-value: 5.72e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   4 ELKAEVLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIAtGQVVEGnKKPSSDTPTHLAL 83
Cdd:cd00398    2 KLKRKIIAACLLLDLYGWVTGTGGNVSARDRDRGYFLITPSGVDYEEMTASDLVVVDAQ-GKVVEG-KKPSSETPLHLAL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  84 YRRYPEIGGIVHTHSRHATIWSQAGL-DLPAWGTTHADYFYGTIPCTRLMTSAeiageyeyqTGEVIIKTFeeRDLSPMQ 162
Cdd:cd00398   80 YRARPDIGCIVHTHSTHATAVSQLKEgLIPAGHTACAVYFTGDIPCTPYMTPE---------TGEDEIGTQ--RALGFPN 148
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556315303 163 IPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPVMQQELLDKHYLRKH 223
Cdd:cd00398  149 SKAVLLRNHGLFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQLPPISLELLNKEYLRKH 209
AraD COG0235
5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar ...
1-224 6.58e-72

5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar degradation) [Amino acid transport and metabolism, Carbohydrate transport and metabolism]; 5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar degradation) is part of the Pathway/BioSystem: Urea cycle


Pssm-ID: 440005 [Multi-domain]  Cd Length: 208  Bit Score: 217.78  E-value: 6.58e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   1 MLDELKAEVLAANLALPAHQLVTFTWGNVSAVDREsGMMIIKPSGVEYDVMTAEDMVVVSIAtGQVVEGNKKPSSDTPTH 80
Cdd:COG0235    2 EEEELREELAAAGRRLARRGLVDGTAGNISVRLDD-DRFLITPSGVDFGELTPEDLVVVDLD-GNVVEGDLKPSSETPLH 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLMT--SAEIAgeyeyqtgEVIIKTFEERdl 158
Cdd:COG0235   80 LAIYRARPDVGAVVHTHSPYATALSALGEPLPPLEQTEAAAFLGDVPVVPYAGpgTEELA--------EAIAEALGDR-- 149
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556315303 159 spmqiPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPvMQQELLDKHYlRKHG 224
Cdd:COG0235  150 -----PAVLLRNHGVVVWGKDLAEAFDRAEVLEEAARIQLLALALGGPLV-LSDEEIDKLA-RKFG 208
Aldolase_II pfam00596
Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and ...
7-196 4.44e-61

Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.


Pssm-ID: 459862 [Multi-domain]  Cd Length: 178  Bit Score: 189.29  E-value: 4.44e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303    7 AEVLAANLALPAHQLVTFTWGNVSAVDRESGMmIIKPSGVEYDVMTAEDMVVVSIAtGQVVEGNKKPSSDTPTHLALYRR 86
Cdd:pfam00596   1 EELAAAGRLLARRGLVEGTGGNISVRLPGDGF-LITPSGVDFGELTPEDLVVVDLD-GNVVEGGLKPSSETPLHLAIYRA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   87 YPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLMTSAEIAgeyeyqTGEVIIKTFEERDlspmqiPAV 166
Cdd:pfam00596  79 RPDAGAVVHTHSPYATALSLAKEGLPPITQEAADFLGGDIPIIPYYTPGTEE------LGERIAEALGGDR------KAV 146
                         170       180       190
                  ....*....|....*....|....*....|
gi 556315303  167 LVHSHGPFAWGKDAADAVHNAVVLEECAYM 196
Cdd:pfam00596 147 LLRNHGLLVWGKTLEEAFYLAEELERAAEI 176
Aldolase_II smart01007
Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and ...
9-196 3.15e-60

Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.


Pssm-ID: 214970 [Multi-domain]  Cd Length: 185  Bit Score: 187.46  E-value: 3.15e-60
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303     9 VLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIATGQVVEGN-KKPSSDTPTHLALYRRY 87
Cdd:smart01007   1 LAAACRLLARRGLVEGTGGNISARVGEEDLFLITPSGVDFGELTASDLVVVDLDGNVVEGGGgPKPSSETPLHLAIYRAR 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303    88 PEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYG-TIPCTRLMTSAEIAGEYEYQTGEVIIKTFEERdlspmqiPAV 166
Cdd:smart01007  81 PDVGAVVHTHSPYATALAALGKPLPLLPTEQAAAFLGgEIPYAPYAGPGTELAEEGAELAEALAEALPDR-------PAV 153
                          170       180       190
                   ....*....|....*....|....*....|
gi 556315303   167 LVHSHGPFAWGKDAADAVHNAVVLEECAYM 196
Cdd:smart01007 154 LLRNHGLLVWGKTLEEAFDLAEELEEAAEI 183
 
Name Accession Description Interval E-value
sgbE PRK12347
L-ribulose-5-phosphate 4-epimerase; Reviewed
1-231 3.17e-180

L-ribulose-5-phosphate 4-epimerase; Reviewed


Pssm-ID: 183459  Cd Length: 231  Bit Score: 492.80  E-value: 3.17e-180
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   1 MLDELKAEVLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIATGQVVEGNKKPSSDTPTH 80
Cdd:PRK12347   1 MLEQLKADVLAANLALPAHHLVTFTWGNVSAVDETRQLMVIKPSGVEYDVMTADDMVVVEIASGKVVEGSKKPSSDTPTH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLMTSAEIAGEYEYQTGEVIIKTFEERDLSP 160
Cdd:PRK12347  81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGAIPCTRLMTAEEINGEYEYQTGEVIIETFEERGISP 160
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556315303 161 MQIPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPVMQQELLDKHYLRKHGANAYYGQ 231
Cdd:PRK12347 161 AQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAPQLPAMQNELLDKHYLRKHGANAYYGQ 231
araD PRK08193
L-ribulose-5-phosphate 4-epimerase AraD;
1-231 2.52e-175

L-ribulose-5-phosphate 4-epimerase AraD;


Pssm-ID: 236181  Cd Length: 231  Bit Score: 480.49  E-value: 2.52e-175
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   1 MLDELKAEVLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIAtGQVVEGNKKPSSDTPTH 80
Cdd:PRK08193   1 MLEDLKQEVLEANLALPKHGLVTFTWGNVSAIDRERGLFVIKPSGVDYDKMTAEDMVVVDLE-GNVVEGKLKPSSDTPTH 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLMTSAEIAGEYEYQTGEVIIKTFEERDLSP 160
Cdd:PRK08193  80 LVLYKAFPEIGGIVHTHSRHATAWAQAGRDIPALGTTHADYFYGDIPCTRKMTDEEINGEYEWETGKVIVETFEKRGIDP 159
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556315303 161 MQIPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPVMQQELLDKHYLRKHGANAYYGQ 231
Cdd:PRK08193 160 AAVPGVLVHSHGPFTWGKDAEDAVHNAVVLEEVAKMAYFTRQLNPQLPDMQQTLLDKHYLRKHGKNAYYGQ 230
araD TIGR00760
L-ribulose-5-phosphate 4-epimerase; E. coli has two genes, sgaE and sgbE (YiaS), that are very ...
1-231 2.11e-165

L-ribulose-5-phosphate 4-epimerase; E. coli has two genes, sgaE and sgbE (YiaS), that are very close homologs of araD, the established L-ribulose-5-phosphate 4-epimerase of E. coli. SgbE, part of an operon for L-xylulose metabolism, also has L-ribulose-5-phosphate 4-epimerase activity; L-xylulose-5-phosphate may be converted into L-ribulose-5-phosphate by another product of that operon. The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD. [Energy metabolism, Sugars]


Pssm-ID: 129843  Cd Length: 231  Bit Score: 455.44  E-value: 2.11e-165
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303    1 MLDELKAEVLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIATGQVVEGNKKPSSDTPTH 80
Cdd:TIGR00760   1 MLEQLKKEVLEANLALPKHQLVTFTWGNVSAIDRERGLVVIKPSGVEYDVMTADDMVVVDLETGNVVEGSKKPSSDTPTH 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLMTSAEIAGEYEYQTGEVIIKTFEERDLSP 160
Cdd:TIGR00760  81 LALYRAFPSIGGIVHTHSRHATIWAQAGKDIPALGTTHADYFYGTIPCTRPMTDEEINGEYELETGKVIVETFEKRGIDP 160
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556315303  161 MQIPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPVMQQELLDKHYLRKHGANAYYGQ 231
Cdd:TIGR00760 161 AQIPGVLVHSHGPFAWGKDAANAVHNAVVLEEVAYMALFSRQLNPQLPPMQQTLLDKHYLRKHGANAYYGQ 231
araD PRK13213
L-ribulose-5-phosphate 4-epimerase; Reviewed
1-231 2.99e-130

L-ribulose-5-phosphate 4-epimerase; Reviewed


Pssm-ID: 106181  Cd Length: 231  Bit Score: 366.75  E-value: 2.99e-130
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   1 MLDELKAEVLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIATGQVVEGNKKPSSDTPTH 80
Cdd:PRK13213   1 MLEQLKQQVFEANLALPKYKLVTFTWGNVSGIDREHGLVVIKPSGVEYDVMSVNDMVVVDLATGKVVEGDKKPSSDTDTH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLMTSAEIAGEYEYQTGEVIIKTFEERDLSP 160
Cdd:PRK13213  81 LVLYRAFAEIGGIVHTHSRHATIWAQAGKSLSALGTTHADYFYGPIPCTRLMTEAEITGDYEHETGKVIVETFAEQGLRA 160
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556315303 161 MQIPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPVMQQELLDKHYLRKHGANAYYGQ 231
Cdd:PRK13213 161 ADIPAVLVNGHGPFAWGSNAANAVHNAVVLEEIAYMNLFTHQLTPGVGDMQQTLLDKHYLRKHGAAAYYGQ 231
sgaE PRK12348
L-ribulose-5-phosphate 4-epimerase; Reviewed
2-231 7.41e-128

L-ribulose-5-phosphate 4-epimerase; Reviewed


Pssm-ID: 183460  Cd Length: 228  Bit Score: 360.27  E-value: 7.41e-128
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   2 LDELKAEVLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIaTGQVVEGNKKPSSDTPTHL 81
Cdd:PRK12348   1 MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMKADDMVVVDM-SGKVVEGEYRPSSDTATHL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  82 ALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLMTSAEIAGEYEYQTGEVIIKTFEERDlsPM 161
Cdd:PRK12348  80 ELYRRYPSLGGIVHTHSTHATAWAQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGNAE--PL 157
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303 162 QIPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPVMQQELLDKHYLRKHGANAYYGQ 231
Cdd:PRK12348 158 HTPGIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARGINPQLNHIDSYLMNKHFMRKHGPNAYYGQ 227
araD PRK13145
L-ribulose-5-phosphate 4-epimerase; Provisional
1-231 2.46e-117

L-ribulose-5-phosphate 4-epimerase; Provisional


Pssm-ID: 183870 [Multi-domain]  Cd Length: 234  Bit Score: 334.11  E-value: 2.46e-117
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   1 MLDELKAEVLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIaTGQVVEGNKKPSSDTPTH 80
Cdd:PRK13145   2 NLQEMRERVCAANKSLPKHGLVKFTWGNVSEVCRELGRIVIKPSGVDYDELTPENMVVTDL-DGNVVEGDLNPSSDLPTH 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLMTSAEIAGEYEYQTGEVIIKTFEERDLSP 160
Cdd:PRK13145  81 VELYKAWPEVGGIVHTHSTEAVGWAQAGRDIPFYGTTHADYFYGPIPCARSLTKDEVNGAYEKETGSVIIEEFEKRGLDP 160
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556315303 161 MQIPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPVMQQELLDKHYLRKHGANAYYGQ 231
Cdd:PRK13145 161 MAVPGIVVRNHGPFTWGKNPEQAVYHSVVLEEVAKMNRLTEQINPRVEPAPQYIMDKHYLRKHGPNAYYGQ 231
Aldolase_II cd00398
Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes ...
4-223 5.72e-95

Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.


Pssm-ID: 238232 [Multi-domain]  Cd Length: 209  Bit Score: 276.55  E-value: 5.72e-95
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   4 ELKAEVLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIAtGQVVEGnKKPSSDTPTHLAL 83
Cdd:cd00398    2 KLKRKIIAACLLLDLYGWVTGTGGNVSARDRDRGYFLITPSGVDYEEMTASDLVVVDAQ-GKVVEG-KKPSSETPLHLAL 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  84 YRRYPEIGGIVHTHSRHATIWSQAGL-DLPAWGTTHADYFYGTIPCTRLMTSAeiageyeyqTGEVIIKTFeeRDLSPMQ 162
Cdd:cd00398   80 YRARPDIGCIVHTHSTHATAVSQLKEgLIPAGHTACAVYFTGDIPCTPYMTPE---------TGEDEIGTQ--RALGFPN 148
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556315303 163 IPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPVMQQELLDKHYLRKH 223
Cdd:cd00398  149 SKAVLLRNHGLFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGGQLPPISLELLNKEYLRKH 209
AraD COG0235
5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar ...
1-224 6.58e-72

5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar degradation) [Amino acid transport and metabolism, Carbohydrate transport and metabolism]; 5-methylthioribulose/5-deoxyribulose/Fuculose 1-phosphate aldolase (methionine salvage, sugar degradation) is part of the Pathway/BioSystem: Urea cycle


Pssm-ID: 440005 [Multi-domain]  Cd Length: 208  Bit Score: 217.78  E-value: 6.58e-72
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   1 MLDELKAEVLAANLALPAHQLVTFTWGNVSAVDREsGMMIIKPSGVEYDVMTAEDMVVVSIAtGQVVEGNKKPSSDTPTH 80
Cdd:COG0235    2 EEEELREELAAAGRRLARRGLVDGTAGNISVRLDD-DRFLITPSGVDFGELTPEDLVVVDLD-GNVVEGDLKPSSETPLH 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLMT--SAEIAgeyeyqtgEVIIKTFEERdl 158
Cdd:COG0235   80 LAIYRARPDVGAVVHTHSPYATALSALGEPLPPLEQTEAAAFLGDVPVVPYAGpgTEELA--------EAIAEALGDR-- 149
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556315303 159 spmqiPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPvMQQELLDKHYlRKHG 224
Cdd:COG0235  150 -----PAVLLRNHGVVVWGKDLAEAFDRAEVLEEAARIQLLALALGGPLV-LSDEEIDKLA-RKFG 208
PRK06557 PRK06557
L-ribulose-5-phosphate 4-epimerase; Validated
1-231 7.97e-69

L-ribulose-5-phosphate 4-epimerase; Validated


Pssm-ID: 235829 [Multi-domain]  Cd Length: 221  Bit Score: 210.63  E-value: 7.97e-69
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   1 MLDELKAEVLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIaTGQVVEGNKKPSSDTPTH 80
Cdd:PRK06557   7 MVEKLREEVCKLHLELPKYGLVVWTSGNVSARDPGTDLVVIKPSGVSYDDLTPEDMVVVDL-DGNVVEGDLKPSSDTASH 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  81 LALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLmtsAEIAGEyeyQTGEVIIKTfeerdLSP 160
Cdd:PRK06557  86 LYVYRHMPDVGGVVHTHSTYATAWAARGEPIPCVLTAMADEFGGPIPVGPF---ALIGDE---AIGKGIVET-----LKG 154
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556315303 161 MQIPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPVMQQElLDKHYLRKHGAnayYGQ 231
Cdd:PRK06557 155 GRSPAVLMQNHGVFTIGKDAEDAVKAAVMVEEVARTVHIARQLGEPIPIPQEE-IDRLYDRYQNV---YGQ 221
Aldolase_II pfam00596
Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and ...
7-196 4.44e-61

Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.


Pssm-ID: 459862 [Multi-domain]  Cd Length: 178  Bit Score: 189.29  E-value: 4.44e-61
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303    7 AEVLAANLALPAHQLVTFTWGNVSAVDRESGMmIIKPSGVEYDVMTAEDMVVVSIAtGQVVEGNKKPSSDTPTHLALYRR 86
Cdd:pfam00596   1 EELAAAGRLLARRGLVEGTGGNISVRLPGDGF-LITPSGVDFGELTPEDLVVVDLD-GNVVEGGLKPSSETPLHLAIYRA 78
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   87 YPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCTRLMTSAEIAgeyeyqTGEVIIKTFEERDlspmqiPAV 166
Cdd:pfam00596  79 RPDAGAVVHTHSPYATALSLAKEGLPPITQEAADFLGGDIPIIPYYTPGTEE------LGERIAEALGGDR------KAV 146
                         170       180       190
                  ....*....|....*....|....*....|
gi 556315303  167 LVHSHGPFAWGKDAADAVHNAVVLEECAYM 196
Cdd:pfam00596 147 LLRNHGLLVWGKTLEEAFYLAEELERAAEI 176
Aldolase_II smart01007
Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and ...
9-196 3.15e-60

Class II Aldolase and Adducin N-terminal domain; This family includes class II aldolases and adducins which have not been ascribed any enzymatic function.


Pssm-ID: 214970 [Multi-domain]  Cd Length: 185  Bit Score: 187.46  E-value: 3.15e-60
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303     9 VLAANLALPAHQLVTFTWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIATGQVVEGN-KKPSSDTPTHLALYRRY 87
Cdd:smart01007   1 LAAACRLLARRGLVEGTGGNISARVGEEDLFLITPSGVDFGELTASDLVVVDLDGNVVEGGGgPKPSSETPLHLAIYRAR 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303    88 PEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYG-TIPCTRLMTSAEIAGEYEYQTGEVIIKTFEERdlspmqiPAV 166
Cdd:smart01007  81 PDVGAVVHTHSPYATALAALGKPLPLLPTEQAAAFLGgEIPYAPYAGPGTELAEEGAELAEALAEALPDR-------PAV 153
                          170       180       190
                   ....*....|....*....|....*....|
gi 556315303   167 LVHSHGPFAWGKDAADAVHNAVVLEECAYM 196
Cdd:smart01007 154 LLRNHGLLVWGKTLEEAFDLAEELEEAAEI 183
PRK06833 PRK06833
L-fuculose-phosphate aldolase;
25-194 1.24e-25

L-fuculose-phosphate aldolase;


Pssm-ID: 180717 [Multi-domain]  Cd Length: 214  Bit Score: 99.44  E-value: 1.24e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  25 TWGNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSIaTGQVVEGNKKPSSDTPTHLALYRRYPEIGGIVHTHSRHATIW 104
Cdd:PRK06833  26 TGGNISIFNREQGLMAITPSGIDYFEIKPEDIVIMDL-DGKVVEGERKPSSELDMHLIFYRNREDINAIVHTHSPYATTL 104
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303 105 SQAGLDLPAwgTTHADYFYGT-IPCTRLMTsaeiageyeYQTGEVIIKTFE---ERDlspmqipAVLVHSHGPFAWGKDA 180
Cdd:PRK06833 105 ACLGWELPA--VHYLIAVAGPnVRCAEYAT---------FGTKELAENAFEameDRR-------AVLLANHGLLAGANNL 166
                        170
                 ....*....|....
gi 556315303 181 ADAVHNAVVLEECA 194
Cdd:PRK06833 167 KNAFNIAEEIEFCA 180
PRK05874 PRK05874
L-fuculose-phosphate aldolase; Validated
2-209 2.05e-19

L-fuculose-phosphate aldolase; Validated


Pssm-ID: 102036 [Multi-domain]  Cd Length: 217  Bit Score: 83.15  E-value: 2.05e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   2 LDELKAEVLAANLALPAHQLVTFTWGNVSAvDRESGMMIIKPSGVEYDVMTAEDMVVVSiATGQVVEG--NKKPSSDTPT 79
Cdd:PRK05874   4 VDDPESAVLAAAKDMLRRGLVEGTAGNISA-RRSDGNVVITPSSVDYAEMLLHDLVLVD-AGGAVLHAkdGRSPSTELNL 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  80 HLALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGTIPCtrlmtsAEIAGEYEYQTGEVIIKTFEERdls 159
Cdd:PRK05874  82 HLACYRAFDDIGSVIHSHPVWATMFAVAHEPIPACIDEFAIYCGGDVRC------TEYAASGTPEVGRNAVRALEGR--- 152
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 556315303 160 pmqiPAVLVHSHGPFAWGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPV 209
Cdd:PRK05874 153 ----AAALIANHGLVAVGPRPDQVLRVTALVERTAQIVWGARALGGPVPI 198
PRK08130 PRK08130
putative aldolase; Validated
27-206 2.13e-15

putative aldolase; Validated


Pssm-ID: 181241 [Multi-domain]  Cd Length: 213  Bit Score: 72.21  E-value: 2.13e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  27 GNVSAvdR-ESGMMIIKPSGVEYDVMTAEDMVVVSiATGQVVEGnKKPSSDTPTHLALYRRYPEIGGIVHTHSRHATIWS 105
Cdd:PRK08130  28 GNISA--RlDDGGWLVTPTGSCLGRLDPARLSKVD-ADGNWLSG-DKPSKEVPLHRAIYRNNPECGAVVHLHSTHLTALS 103
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303 106 -QAGLD----LPAWgtthADYFY---GTIPCTRLMT--SAEIAGEYeyqtgeviiktfeeRDLSPmQIPAVLVHSHGPFA 175
Cdd:PRK08130 104 cLGGLDptnvLPPF----TPYYVmrvGHVPLIPYYRpgDPAIAEAL--------------AGLAA-RYRAVLLANHGPVV 164
                        170       180       190
                 ....*....|....*....|....*....|.
gi 556315303 176 WGKDAADAVHNAVVLEECAYMGLFSRQLAPQ 206
Cdd:PRK08130 165 WGSSLEAAVNATEELEETAKLILLLGGRPPR 195
PRK08087 PRK08087
L-fuculose-phosphate aldolase;
25-213 1.18e-13

L-fuculose-phosphate aldolase;


Pssm-ID: 181226 [Multi-domain]  Cd Length: 215  Bit Score: 67.46  E-value: 1.18e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  25 TWGNVSAvdRESGMMIIKPSGVEYDVMTaEDMVVVSIATGQVVEGnKKPSSDTPTHLALYRRYPEIGGIVHTHSRHATIW 104
Cdd:PRK08087  26 TAGNVSV--RYQDGMLITPTGIPYEKLT-ESHIVFVDGNGKHEEG-KLPSSEWRFHMAAYQTRPDANAVVHNHAVHCTAV 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303 105 SQAGLDLPAW-------GTTHadyfygtIPCTRLMT--SAEIAgeyeyqtgEVIIKTFEERDlspmqipAVLVHSHGPFA 175
Cdd:PRK08087 102 SILNRPIPAIhymiaaaGGNS-------IPCAPYATfgTRELS--------EHVALALKNRK-------ATLLQHHGLIA 159
                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 556315303 176 WGKDAADAVHNAVVLEECAYMGLFSRQLAPQLPVMQQE 213
Cdd:PRK08087 160 CEVNLEKALWLAHEVEVLAQLYLKTLAITDPVPVLSDE 197
PRK08660 PRK08660
aldolase;
16-203 4.02e-13

aldolase;


Pssm-ID: 181527 [Multi-domain]  Cd Length: 181  Bit Score: 65.36  E-value: 4.02e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  16 LPAHQLVTFTWGNVSAvdRESGMMIIKPSGVEYDVMTAEDMVVVSI-ATGQVvegNKKPSSDTPTHLALYRRYPEiGGIV 94
Cdd:PRK08660  12 LFAHGLVSSHFGNISV--RTGDGLLITRTGSMLDEITEGDVIEVGIdDDGSV---DPLASSETPVHRAIYRRTSA-KAIV 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  95 HTHSRHATIWS-QAGLDLPAWGTTHadYFYGTIPCTRLMT-SAEIAgeyeyqtgEVIIKTFEERDlspmqipAVLVHSHG 172
Cdd:PRK08660  86 HAHPPYAVALSlLEDEIVPLDSEGL--YFLGTIPVVGGDIgSGELA--------ENVARALSEHK-------GVVVRGHG 148
                        170       180       190
                 ....*....|....*....|....*....|.
gi 556315303 173 PFAWGKDAADAVHNAVVLEECAYMGLFSRQL 203
Cdd:PRK08660 149 TFAIGKTLEEAYIYTSQLEHSCKVLYLVRTA 179
PRK09220 PRK09220
methylthioribulose 1-phosphate dehydratase;
25-183 6.51e-12

methylthioribulose 1-phosphate dehydratase;


Pssm-ID: 236415 [Multi-domain]  Cd Length: 204  Bit Score: 62.26  E-value: 6.51e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  25 TWGNVSAvdRES-GMMIIKPSGVEYDVMTAEDMVVVSIAtGQVVEGNKKPSSDTPTHLALYRRYPEIGGIVHTHSRHATI 103
Cdd:PRK09220  26 TSGNMSV--RLDeQHCAITVSGKDKGSLTAEDFLQVDIA-GNAVPSGRKPSAETLLHTQLYRLFPEIGAVLHTHSVNATV 102
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303 104 WSqagldlpawgtthadyfygtipctRLMTSAEIAGE-YEYQTGEVIIKTFEER-----------------------DLS 159
Cdd:PRK09220 103 LS------------------------RVEKSDALVLEgYELQKAFAGQTTHETAvvvpifdndqdiarlaarvapylDAQ 158
                        170       180
                 ....*....|....*....|....
gi 556315303 160 PMQiPAVLVHSHGPFAWGKDAADA 183
Cdd:PRK09220 159 PLR-YGYLIRGHGLYCWGRDMAEA 181
PRK06357 PRK06357
hypothetical protein; Provisional
27-128 9.38e-09

hypothetical protein; Provisional


Pssm-ID: 180541 [Multi-domain]  Cd Length: 216  Bit Score: 53.63  E-value: 9.38e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  27 GNVS---AVDRESGMMIIKP---SGVEYDVMTAEDMVVVSIATGQVVEGNKKPSSDTPTHLALYRRYPEIGGIVHTHSRH 100
Cdd:PRK06357  28 GNISvrmTAEKNKEYIIMTPtlmSEAKLCDLSPYQILVVDLNTGEVIEGVGRVTREINMHEAAYVANPKIKCVYHSHAKE 107
                         90       100
                 ....*....|....*....|....*...
gi 556315303 101 ATIWSQAGLDLPawGTTHADYFYGTIPC 128
Cdd:PRK06357 108 SMFWATLGLEMP--NLTEATQKLGKIPT 133
PRK08333 PRK08333
aldolase;
27-194 6.67e-08

aldolase;


Pssm-ID: 181393 [Multi-domain]  Cd Length: 184  Bit Score: 50.98  E-value: 6.67e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  27 GNVSAvdRESGMMIIKPSGVEYDVMTAEDMVVVSIaTGQVVEGnKKPSSDTPTHLALYRRYPEIGGIVHTHSRHATIWSQ 106
Cdd:PRK08333  26 GNLSI--RVGNLVFIKATGSVMDELTREQVAVIDL-NGNQLSS-VRPSSEYRLHLAVYRNRPDVRAIAHLHPPYSIVAST 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303 107 A-GLDLPAWgTTHADYFYGTIPCT--RLMTSAEIAgeyeyqtgEVIIKTFEERDlspmqipAVLVHSHGPFAWGKDAADA 183
Cdd:PRK08333 102 LlEEELPII-TPEAELYLKKIPILpfRPAGSVELA--------EQVAEAMKEYD-------AVIMERHGIVTVGRSLREA 165
                        170
                 ....*....|.
gi 556315303 184 VHNAVVLEECA 194
Cdd:PRK08333 166 FYKAELVEESA 176
mtnB PRK06754
methylthioribulose 1-phosphate dehydratase;
2-203 5.25e-07

methylthioribulose 1-phosphate dehydratase;


Pssm-ID: 180679 [Multi-domain]  Cd Length: 208  Bit Score: 48.51  E-value: 5.25e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303   2 LDELKAEvLAANLALPAhqlvtfTWGNVS-AVDRESGMMIIKPSGVEYDVMTAEDMVVVSiATGQVVEGNK-KPSSDTPT 79
Cdd:PRK06754  11 LAEIKKE-LAARDWFPA------TSGNLSiKVSDDPLTFLVTASGKDKRKTTPEDFLLVD-HDGKPVEETElKPSAETLL 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  80 HLALYRRyPEIGGIVHTHS-------------RHATIWSQ---AGLDLpaWG----------TTHADyfygtIPctrlmT 133
Cdd:PRK06754  83 HTHIYNN-TNAGCVLHVHTvdnnviselygddGAVTFQGQeiiKALGI--WEenaeihipiiENHAD-----IP-----T 149
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303 134 SAEIAGeyEYQTGEViiktfeerdlspmqiPAVLVHSHGPFAWGKDAADAVHnavVLEecAYMGLFSRQL 203
Cdd:PRK06754 150 LAEEFA--KHIQGDS---------------GAVLIRNHGITVWGRDAFEAKK---HLE--AYEFLFSYHI 197
PRK07090 PRK07090
class II aldolase/adducin domain protein; Provisional
27-111 6.27e-04

class II aldolase/adducin domain protein; Provisional


Pssm-ID: 180832  Cd Length: 260  Bit Score: 40.00  E-value: 6.27e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  27 GNVSAVDRESGMMIIKPSGVEYDVMTAEDMVVVSiATGQVVEGNKKPSSDTPTHLALYRRYPEIGGIVHTHSRHATIWSQ 106
Cdd:PRK07090  53 GQITARAEAPGTYYTQRLGLGFDEITASNLLLVD-EDLNVLDGEGMPNPANRFHSWIYRARPDVNCIIHTHPPHVAALSM 131

                 ....*
gi 556315303 107 AGLDL 111
Cdd:PRK07090 132 LEVPL 136
PRK06486 PRK06486
aldolase;
36-126 7.97e-04

aldolase;


Pssm-ID: 235814  Cd Length: 262  Bit Score: 39.70  E-value: 7.97e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  36 SGMMIIKPSGVEYDVMTAEDMVVVSIAtGQVVEGNKKPSsdtPT----HLALYRRYPEIGGIVHTHSRHATIWSQAGLDL 111
Cdd:PRK06486  59 DDLFLVNPYGYAFSEITASDLLICDFD-GNVLAGRGEPE---ATaffiHARIHRAIPRAKAAFHTHMPYATALSLTEGRP 134
                         90
                 ....*....|....*
gi 556315303 112 PAWGTTHADYFYGTI 126
Cdd:PRK06486 135 LTTLGQTALKFYGRT 149
PRK06208 PRK06208
class II aldolase/adducin family protein;
43-111 4.97e-03

class II aldolase/adducin family protein;


Pssm-ID: 235743  Cd Length: 274  Bit Score: 37.28  E-value: 4.97e-03
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556315303  43 PSGVEYDVMTAEDMVVVSiATGQVVEGNKKPS-SDTPTHLALYRRYPEIGGIVHTHSRHATIWSQAGLDL 111
Cdd:PRK06208  82 PLGVHFSQIKVSDLLLVD-HDGEVVEGDRPLNrAAFAIHSAIHEARPDVVAAAHTHSTYGKAWSTLGRPL 150
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH