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Conserved domains on  [gi|556358362|ref|WP_023300484|]
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MULTISPECIES: flagellar filament capping protein FliD [Enterobacter]

Protein Classification

flagellar filament capping protein FliD( domain architecture ID 11483063)

flagellar filament capping protein FliD is required for the morphogenesis and elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
fliD PRK08032
flagellar capping protein; Reviewed
 1-464 0e+00

flagellar capping protein; Reviewed


:

Pssm-ID: 236141 [Multi-domain]  Cd Length: 462  Bit Score: 560.46  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362   1 MASISSLGIGSGLKLADILDSLTTAEKAQLTPITKQQSSYTAKLSAYGTLKSSLEAFQTANTALNKADLFTATSTSSSST 80
Cdd:PRK08032   1 MASISSLGVGSGLDLDSLLDSLTAAEKKRLTPITNQQSSYTAKLTAYGTLKSALEKFQTANTALNKADLFSSTKVSSSTT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  81 AFSATTTGSAIAGKYTISVSQLAQAQTLTTKnAQPDTKTAIATADSK--ITFTAGNGKDPVTIDISAANSSLTGIRDAIN 158
Cdd:PRK08032  81 AFSATTDSGASAGKYTISVTQLAQAQSLTTA-TVSSTKEALGTSDSTrtITITQPGRKEPLEIDLTAGQTSLSGIRDAIN 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 159 KADAGVTASIINVGNGQYRLSITSTETGADNAVSISVSGDSALQSFMGYNGTSTdaSNGMMESVTAQNAKLKVNNVDIEN 238
Cdd:PRK08032 160 KAEGGVSASIIKVGDGEYRLVLTSKDTGTDNAMTISVEGDSKLNDFLNYDSSTG--SGNMTQSVAAQNAKLTVNGIAIER 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 239 SSNTISDALEDITLNLNDVTTGNQTLTITKDTSKAETAMKAWVDAYNTLQDSFASLTKYTAVDAGTDaQDSSNGALLGDT 318
Cdd:PRK08032 238 QSNTITDAPEGITLNLKKVTTGNQTLTITKDTTKAKEAIKDWVDAYNSLQDTFSSLTKYTAVDAGAD-QSSSNGALLGDS 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 319 TLRTIQTQLKTMLSNTVGGTAYKTLSQVGITSDPSTGKLELSSEKLKKALTDNPSAVKDLVVGDGKTTGITTTMATHLTD 398
Cdd:PRK08032 317 TLRTIQTQLKSQLANSQSSSDFKTLAQIGITQDPSDGKLEIDDDKLTKALKEDPAGVKALFVGDGKKTGITTQIATNLKS 396

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556358362 399 WLSSKGIIQAAKDGVSKTLNKLTDQYNAVSERIDARVAQYKAQFTQLDVLMTSLNNTSSYLTQQFE 464
Cdd:PRK08032 397 WLSTTGIIKTATDGVNKTLKKLTKQYNAVSDSIDATIARYKAQFTQLDKLMTSLNSTSSYLTQQFE 462
 
Name Accession Description Interval E-value
fliD PRK08032
flagellar capping protein; Reviewed
 1-464 0e+00

flagellar capping protein; Reviewed


Pssm-ID: 236141 [Multi-domain]  Cd Length: 462  Bit Score: 560.46  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362   1 MASISSLGIGSGLKLADILDSLTTAEKAQLTPITKQQSSYTAKLSAYGTLKSSLEAFQTANTALNKADLFTATSTSSSST 80
Cdd:PRK08032   1 MASISSLGVGSGLDLDSLLDSLTAAEKKRLTPITNQQSSYTAKLTAYGTLKSALEKFQTANTALNKADLFSSTKVSSSTT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  81 AFSATTTGSAIAGKYTISVSQLAQAQTLTTKnAQPDTKTAIATADSK--ITFTAGNGKDPVTIDISAANSSLTGIRDAIN 158
Cdd:PRK08032  81 AFSATTDSGASAGKYTISVTQLAQAQSLTTA-TVSSTKEALGTSDSTrtITITQPGRKEPLEIDLTAGQTSLSGIRDAIN 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 159 KADAGVTASIINVGNGQYRLSITSTETGADNAVSISVSGDSALQSFMGYNGTSTdaSNGMMESVTAQNAKLKVNNVDIEN 238
Cdd:PRK08032 160 KAEGGVSASIIKVGDGEYRLVLTSKDTGTDNAMTISVEGDSKLNDFLNYDSSTG--SGNMTQSVAAQNAKLTVNGIAIER 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 239 SSNTISDALEDITLNLNDVTTGNQTLTITKDTSKAETAMKAWVDAYNTLQDSFASLTKYTAVDAGTDaQDSSNGALLGDT 318
Cdd:PRK08032 238 QSNTITDAPEGITLNLKKVTTGNQTLTITKDTTKAKEAIKDWVDAYNSLQDTFSSLTKYTAVDAGAD-QSSSNGALLGDS 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 319 TLRTIQTQLKTMLSNTVGGTAYKTLSQVGITSDPSTGKLELSSEKLKKALTDNPSAVKDLVVGDGKTTGITTTMATHLTD 398
Cdd:PRK08032 317 TLRTIQTQLKSQLANSQSSSDFKTLAQIGITQDPSDGKLEIDDDKLTKALKEDPAGVKALFVGDGKKTGITTQIATNLKS 396

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556358362 399 WLSSKGIIQAAKDGVSKTLNKLTDQYNAVSERIDARVAQYKAQFTQLDVLMTSLNNTSSYLTQQFE 464
Cdd:PRK08032 397 WLSTTGIIKTATDGVNKTLKKLTKQYNAVSDSIDATIARYKAQFTQLDKLMTSLNSTSSYLTQQFE 462
FliD COG1345
Flagellar capping protein FliD [Cell motility];
1-465 3.48e-131

Flagellar capping protein FliD [Cell motility];


Pssm-ID: 440956 [Multi-domain]  Cd Length: 450  Bit Score: 386.89  E-value: 3.48e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362   1 MASISSLGIGSGLKLADILDSLTTAEKAQLTPITKQQSSYTAKLSAYGTLKSSLEAFQTANTALNKAD-LFTATSTSSSS 79
Cdd:COG1345    1 MASISSLGLGSGLDTDSLVSQLMAAERAPLTRLTQQQTSLEAQISAYGTLKSALSSLQDALSALKKSStFNAKKATSSNE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  80 TAFSATTTGSAIAGKYTISVSQLAQAQTLTTKnAQPDTKTAIATadSKITFTAGNGKdPVTIDISAaNSSLTGIRDAINK 159
Cdd:COG1345   81 SAVTATATSGAAAGSYSIEVTQLAQAQSLASA-AFASATTTLGT--GTLTITVGDGK-TVTITIDA-NDTLADIADAINA 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 160 ADAGVTASIINVGNgqYRLSITSTETGADNAVSISVSGDSALQSFMGYngtstDASNGMMESVTAQNAKLKVNNVDIENS 239
Cdd:COG1345  156 AGAGVTASIVNDGS--YRLVLTSKKTGAANAITVSVSGDGALSALLGF-----DPASGMTETQAAQDAKLTVNGITITSS 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 240 SNTISDALEDITLNLNDVTTGNQTLTITKDTSKAETAMKAWVDAYNTLQDSFASLTKYTavdagTDAQDSSNGALLGDTT 319
Cdd:COG1345  229 SNTFTDAIDGVTLTLKKVTGGPVTLTVSTDTDAIKKAIKDFVDAYNELIDTINSLTKYT-----KDEETAKAGALLGDST 303

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 320 LRTIQTQLKTMLSNTV-GGTAYKTLSQVGITSDpSTGKLELSSEKLKKALTDNPSAVKDLVVGDGKTTGITTTMATHLTD 398
Cdd:COG1345  304 LRSLQSQLRSALSSPVsGGGSYKSLSDIGITTD-KDGKLELDETKLDKALAEDPDAVAKLFTGDGKTTGIATRLDDLLDS 382

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 556358362 399 WLSSKGIIQAAKDGVSKTLNKLTDQYNAVSERIDARVAQYKAQFTQLDVLMTSLNNTSSYLTQQFEN 465
Cdd:COG1345  383 YTGSDGTITSRTDGLNKQLKDLDDQIERLEDRLEAREARYRKQFTALDTAMSQLNSQSSYLTQQLAS 449
FliD_C pfam07195
Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 224-454 2.11e-53

Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the C-terminal region of this family of proteins.


Pssm-ID: 429344 [Multi-domain]  Cd Length: 230  Bit Score: 179.02  E-value: 2.11e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  224 AQNAKLKVNNVDIENSSNTISDALEDITLNLNDVTTGNQ-TLTITKDTSKAETAMKAWVDAYNTLQDSFASLTKYTavda 302
Cdd:pfam07195   1 AQNAEFTVDGIKVTSSSNTVTDVIDGVTLNLTKTTEGGEtTLSVSTDTDGIKEAIKDFVDAYNELITTINELTSYT---- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  303 gTDAQDSSNGALLGDTTLRTIQTQLKTMLSNTVGGTAYKTLSQVGITSDPSTGKLELSSEKLKKALTDNPSAVKDLVVGD 382
Cdd:pfam07195  77 -LDEETKKAGALAGDSTLRSILSQLRSVLSSSVSDGSISSLADIGITTDSDYGTLELDEEKLDKALKENPDSVAELFTGD 155

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 556358362  383 GKTTGI--TTTMATHLTDWL-SSKGIIQAAKDGVSKTLNKLTDQYNAVSERIDARVAQYKAQFTQLDVLMTSLNN 454
Cdd:pfam07195 156 GSRVDTgfAKRLTDLLKSYVgASNGTIAGRSDSLNKQIKRLDKQIEDLDKRLETLEARLTAQFTAMDTAVSKMNA 230
 
Name Accession Description Interval E-value
fliD PRK08032
flagellar capping protein; Reviewed
 1-464 0e+00

flagellar capping protein; Reviewed


Pssm-ID: 236141 [Multi-domain]  Cd Length: 462  Bit Score: 560.46  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362   1 MASISSLGIGSGLKLADILDSLTTAEKAQLTPITKQQSSYTAKLSAYGTLKSSLEAFQTANTALNKADLFTATSTSSSST 80
Cdd:PRK08032   1 MASISSLGVGSGLDLDSLLDSLTAAEKKRLTPITNQQSSYTAKLTAYGTLKSALEKFQTANTALNKADLFSSTKVSSSTT 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  81 AFSATTTGSAIAGKYTISVSQLAQAQTLTTKnAQPDTKTAIATADSK--ITFTAGNGKDPVTIDISAANSSLTGIRDAIN 158
Cdd:PRK08032  81 AFSATTDSGASAGKYTISVTQLAQAQSLTTA-TVSSTKEALGTSDSTrtITITQPGRKEPLEIDLTAGQTSLSGIRDAIN 159

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 159 KADAGVTASIINVGNGQYRLSITSTETGADNAVSISVSGDSALQSFMGYNGTSTdaSNGMMESVTAQNAKLKVNNVDIEN 238
Cdd:PRK08032 160 KAEGGVSASIIKVGDGEYRLVLTSKDTGTDNAMTISVEGDSKLNDFLNYDSSTG--SGNMTQSVAAQNAKLTVNGIAIER 237

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 239 SSNTISDALEDITLNLNDVTTGNQTLTITKDTSKAETAMKAWVDAYNTLQDSFASLTKYTAVDAGTDaQDSSNGALLGDT 318
Cdd:PRK08032 238 QSNTITDAPEGITLNLKKVTTGNQTLTITKDTTKAKEAIKDWVDAYNSLQDTFSSLTKYTAVDAGAD-QSSSNGALLGDS 316

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 319 TLRTIQTQLKTMLSNTVGGTAYKTLSQVGITSDPSTGKLELSSEKLKKALTDNPSAVKDLVVGDGKTTGITTTMATHLTD 398
Cdd:PRK08032 317 TLRTIQTQLKSQLANSQSSSDFKTLAQIGITQDPSDGKLEIDDDKLTKALKEDPAGVKALFVGDGKKTGITTQIATNLKS 396

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556358362 399 WLSSKGIIQAAKDGVSKTLNKLTDQYNAVSERIDARVAQYKAQFTQLDVLMTSLNNTSSYLTQQFE 464
Cdd:PRK08032 397 WLSTTGIIKTATDGVNKTLKKLTKQYNAVSDSIDATIARYKAQFTQLDKLMTSLNSTSSYLTQQFE 462
FliD COG1345
Flagellar capping protein FliD [Cell motility];
1-465 3.48e-131

Flagellar capping protein FliD [Cell motility];


Pssm-ID: 440956 [Multi-domain]  Cd Length: 450  Bit Score: 386.89  E-value: 3.48e-131
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362   1 MASISSLGIGSGLKLADILDSLTTAEKAQLTPITKQQSSYTAKLSAYGTLKSSLEAFQTANTALNKAD-LFTATSTSSSS 79
Cdd:COG1345    1 MASISSLGLGSGLDTDSLVSQLMAAERAPLTRLTQQQTSLEAQISAYGTLKSALSSLQDALSALKKSStFNAKKATSSNE 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  80 TAFSATTTGSAIAGKYTISVSQLAQAQTLTTKnAQPDTKTAIATadSKITFTAGNGKdPVTIDISAaNSSLTGIRDAINK 159
Cdd:COG1345   81 SAVTATATSGAAAGSYSIEVTQLAQAQSLASA-AFASATTTLGT--GTLTITVGDGK-TVTITIDA-NDTLADIADAINA 155

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 160 ADAGVTASIINVGNgqYRLSITSTETGADNAVSISVSGDSALQSFMGYngtstDASNGMMESVTAQNAKLKVNNVDIENS 239
Cdd:COG1345  156 AGAGVTASIVNDGS--YRLVLTSKKTGAANAITVSVSGDGALSALLGF-----DPASGMTETQAAQDAKLTVNGITITSS 228

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 240 SNTISDALEDITLNLNDVTTGNQTLTITKDTSKAETAMKAWVDAYNTLQDSFASLTKYTavdagTDAQDSSNGALLGDTT 319
Cdd:COG1345  229 SNTFTDAIDGVTLTLKKVTGGPVTLTVSTDTDAIKKAIKDFVDAYNELIDTINSLTKYT-----KDEETAKAGALLGDST 303

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 320 LRTIQTQLKTMLSNTV-GGTAYKTLSQVGITSDpSTGKLELSSEKLKKALTDNPSAVKDLVVGDGKTTGITTTMATHLTD 398
Cdd:COG1345  304 LRSLQSQLRSALSSPVsGGGSYKSLSDIGITTD-KDGKLELDETKLDKALAEDPDAVAKLFTGDGKTTGIATRLDDLLDS 382

                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 556358362 399 WLSSKGIIQAAKDGVSKTLNKLTDQYNAVSERIDARVAQYKAQFTQLDVLMTSLNNTSSYLTQQFEN 465
Cdd:COG1345  383 YTGSDGTITSRTDGLNKQLKDLDDQIERLEDRLEAREARYRKQFTALDTAMSQLNSQSSYLTQQLAS 449
FliD_C pfam07195
Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 224-454 2.11e-53

Flagellar hook-associated protein 2 C-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the C-terminal region of this family of proteins.


Pssm-ID: 429344 [Multi-domain]  Cd Length: 230  Bit Score: 179.02  E-value: 2.11e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  224 AQNAKLKVNNVDIENSSNTISDALEDITLNLNDVTTGNQ-TLTITKDTSKAETAMKAWVDAYNTLQDSFASLTKYTavda 302
Cdd:pfam07195   1 AQNAEFTVDGIKVTSSSNTVTDVIDGVTLNLTKTTEGGEtTLSVSTDTDGIKEAIKDFVDAYNELITTINELTSYT---- 76

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  303 gTDAQDSSNGALLGDTTLRTIQTQLKTMLSNTVGGTAYKTLSQVGITSDPSTGKLELSSEKLKKALTDNPSAVKDLVVGD 382
Cdd:pfam07195  77 -LDEETKKAGALAGDSTLRSILSQLRSVLSSSVSDGSISSLADIGITTDSDYGTLELDEEKLDKALKENPDSVAELFTGD 155

                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 556358362  383 GKTTGI--TTTMATHLTDWL-SSKGIIQAAKDGVSKTLNKLTDQYNAVSERIDARVAQYKAQFTQLDVLMTSLNN 454
Cdd:pfam07195 156 GSRVDTgfAKRLTDLLKSYVgASNGTIAGRSDSLNKQIKRLDKQIEDLDKRLETLEARLTAQFTAMDTAVSKMNA 230
fliD PRK07737
flagellar hook-associated protein 2;
8-463 1.14e-29

flagellar hook-associated protein 2;


Pssm-ID: 236082 [Multi-domain]  Cd Length: 501  Bit Score: 121.06  E-value: 1.14e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362   8 GIGSGLKLADILDSLTTAEKAQLTPITKQQSSYTAKLSAYGTLKSSLEAFQ--TANTALNKADLFTATSTSSSSTAFSAT 85
Cdd:PRK07737   7 GLASGMDIDDIVSKLMKTERAPLDKLTQKKQTLEWQRDSYREMNTLLKDLDdyIFNNITRQSTYLKKTVTSSNESVVTAT 86

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  86 TTGSAIAGKYTISVSQLAQAQTLTTKNAQPDTKTAIATADSKITfTAGNGKdPVTIDIS-AANSSLTGIRDAINKADAGV 164
Cdd:PRK07737  87 ASSSAANGSTTMQVTQLATAATWKSSAKTSFYTGADQTLTFNVT-NPGETT-AKTVEISvKQTDTLDDVISKLNSSDLGV 164

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 165 TA---SIINVGNGQYRLSITSTETGAdnAVSISVsGDSALQSFM----GYngTSTDASNGMMESVTAQNAKLKVNNVDIE 237
Cdd:PRK07737 165 SAfkdKIWNGTEYVETIAITSKATGA--GASIQA-ADGATASFFsqqlGF--TNLDADNELTAKTEGQNAQVTINGLQTE 239

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 238 NSSNTISdaLEDITLNLNDVTTGNQTLTITKDTSKAETAMKAWVDAYNTLQDSF-ASLT--KYTAVDAGTDAQ------- 307
Cdd:PRK07737 240 RTSNTFT--INGVTYTLKNTTAGTVTLSVATDVDGIFNKIKDFVDKYNELIDKInAKLKeeRYRDYPPLTDEQkeamtek 317

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 308 -------DSSNGALLGDTTLRTIQTQLKTMLSNTVGGTAYKT--LSQVGITSDPS---TGKLELSSEKLKKALTDNPSAV 375
Cdd:PRK07737 318 qielweeKAKSGLLRGDSILSSALSKMRMDFYTKVEGIDGGFsqLAQIGITTSSNyldGGKLEIDETKLRQKIKENPDAV 397

                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 376 KDLVVGDGKTTGItttmathltdwlSSKGIIQAAKDGVSKT-----------------------LNKLTDQYNAVSERID 432
Cdd:PRK07737 398 YQLFNSGGSSSNY------------NEKGIARRLRDTLKETiksieqkagnttmtnqqfaigkdLNQIETQIDRFQDRLK 465

                        490       500       510
                 ....*....|....*....|....*....|.
gi 556358362 433 ARVAQYKAQFTQLDVLMTSLNNTSSYLTQQF 463
Cdd:PRK07737 466 QIEDRYYKKFSAMEKAIQKANEQSMYLMNAL 496
PRK12765 PRK12765
flagellar filament capping protein FliD;
3-384 3.74e-28

flagellar filament capping protein FliD;


Pssm-ID: 237194 [Multi-domain]  Cd Length: 595  Bit Score: 117.69  E-value: 3.74e-28
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362   3 SISSLGIGSGLKLA-DILDSLTTA-EKAQLTPITKQQSSYTAKLSAYGTLKSSLEAFQTANTALNKADLFTATSTSSSST 80
Cdd:PRK12765   5 SLSSLGFGSDGVLSqDTIDKLKEAdQKAQIDPITTKIEENTTKQKDLTAIKTLLSNFKTSVSSLADETSYLKRKVSISDN 84

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  81 AFSATTTGSAIAGK-YTISVSQLAQAQTLTTKNAQPDTKTAIATADSKITFTAGNGKDPVTIDISAaNSSLTGIRDAINK 159
Cdd:PRK12765  85 PPASVTVNSGVNLQsMKINVSQLAQKDVYQSKGFANDSSFVNATLTGETDLTIFSNGKEYTITVDK-STTYRDLADKINE 163

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 160 ADAG-VTASIINVGNGQ-YRLSITSTETGADNAVSISVSGDSALQSFMGYN-----------------GTSTDASNGMME 220
Cdd:PRK12765 164 ASGGkIQAKILNVGGKNpYRLVLQSKETGADNAISFYAGKKDAQSDNDAENifkslgwdlddtstidpGKDKKGYGIKDA 243

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 221 SV---TAQNAKLKVNNVDIENSSNTISDALEDITLNLNDvtTGNQTLTITKDTSKAETAMKAWVDAYNTLQDSFASLTKY 297
Cdd:PRK12765 244 SLhiqTAQNAEFTYNGIKITRSSNTIDDLGVGVTLTLNK--TGSINFDIQQDTEGVTKAVEDLVDAYNNLVTNLNAATSY 321

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 298 tavdagtDAQDSSNGALLGDTTLRTIQTQL-KTMLSNTVGGTAY--KTLSQVGITSDpSTGKLELSSEKLKKALTDNPSA 374
Cdd:PRK12765 322 -------NSETGTKGTFQGVSEITSIRSSIlADLFSQVVDGTDEdgKSLQDFGLSLN-SDGTLSFDSSKFEQKVSEDPDS 393

                        410
                 ....*....|
gi 556358362 375 VKDLVVGDGK 384
Cdd:PRK12765 394 TQSFFSGSTK 403
fliD PRK06798
flagellar hook-associated protein 2;
31-376 2.69e-21

flagellar hook-associated protein 2;


Pssm-ID: 180698 [Multi-domain]  Cd Length: 440  Bit Score: 96.00  E-value: 2.69e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  31 TPITKQQSSYTAKLSAYGTLKSSLEAFQTANTALNKADLFTATSTSSSSTAFSATTTGSAIAGKYTISVSQLAQAQTLTT 110
Cdd:PRK06798  40 TPYTNQKQSLTSEKLLYASLKKEFSSFLQTFKDLTTFKGNEKKVTLSQEGYITVQADASAIAGTYNITVENLAQRHQITS 119

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 111 KnaqpdtktAIATADSKI----TFTAGNGKDPVTIDISAANssltgIRDAINKADAGVtaSIINVGNgqyRLSITSTETG 186
Cdd:PRK06798 120 K--------PVPDIDAKIgvdeTIKINGKEIKVTKDMTYKD-----LINKINSGNYGV--SAYTLGN---KIFFTSTTEG 181

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 187 ADNAVSIsVSGDSALQSFMGYNGTSTDASNGMMEsvtAQNAKLKVNNVDIENSSNTIsDALEDITLNLNDVTTGNQTLTI 266
Cdd:PRK06798 182 EEGSIKF-TDGDSGFLEAIGLVQSSGVAANDITA---AENAEYTINGIKGTSATNKI-ETIPGVTINLKKETTEPIKLTI 256

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 267 T-KDTSKAETAMKAWVDAYNTLQDSFasltkytavdagtDAQDSSNGALLGDTTLRTIQTQLKTMLSNTVGGtayKTLSQ 345
Cdd:PRK06798 257 QdSNVKDAANLIKKMVDEYNKAVSTV-------------DLFAGKGGALQGSAIMFSINRAMNNVFTFSQDG---NYLFS 320

                        330       340       350
                 ....*....|....*....|....*....|.
gi 556358362 346 VGITSDpSTGKLELSSEKLKKALTDNPSAVK 376
Cdd:PRK06798 321 FGIQVD-KEGTMKVDEEALKKALKENPDAAK 350
fliD PRK06664
flagellar hook-associated protein FliD; Validated
 223-470 2.73e-18

flagellar hook-associated protein FliD; Validated


Pssm-ID: 235848 [Multi-domain]  Cd Length: 661  Bit Score: 87.90  E-value: 2.73e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 223 TAQNAKLKVNNVDIENSSNTISDALEDITLNLNDVTTGNQTLTITKDTSKAETAMKAWVDAYNTL-----------QDSF 291
Cdd:PRK06664 389 EAKDAKIKFDGVEVERDKNEITDLIPGVTLNLHKASEDPVTLKIEPDYEKIKNLIIEFVAAYNEVlaeinivtsneKSSI 468

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 292 ASLTKYTAVDAGTDAQDSSnGALLGDTTLRTIQTQLKTMLSN---TVGGTAYKTLSQVGITSDPS--------TGKLELS 360
Cdd:PRK06664 469 IEELTYLSDEEKEEAYKNL-GLLRGEFTLLRLKSRLKTIISSsypTSDDNAFRMLNQIGISTNSVgssggliqDGYLELD 547

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 361 SEKLKKALTDNPSAVK---------DLVVGDGkttgITTTMATHLTDWLSSKGIIQAAKDGVSKtlnKLTDQYNAVSE-- 429
Cdd:PRK06664 548 EKKLDEVLKENPDSVRelfafdsngDAVMDNG----VAKMLLEYLSPYTQAGGIIYNKVKGLDE---RIADNNKKIEEye 620

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|..
gi 556358362 430 -RIDARVAQYKAQFTQLDVLMTSLNNTSSYLtQQFENTSSNK 470
Cdd:PRK06664 621 kKLESKERKLKGKYLTMDQTVKKMKEQSNYL-KNFNKSGRNR 661
FliD_N pfam02465
Flagellar hook-associated protein 2 N-terminus; The flagellar hook-associated protein 2 (HAP2 ...
 11-106 9.01e-14

Flagellar hook-associated protein 2 N-terminus; The flagellar hook-associated protein 2 (HAP2 or FliD) forms the distal end of the flagella, and plays a role in mucin specific adhesion of the bacteria. This alignment covers the N-terminal region of this family of proteins.


Pssm-ID: 460566 [Multi-domain]  Cd Length: 97  Bit Score: 66.82  E-value: 9.01e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362   11 SGLKLADILDSLTTAEKAQLTPITKQQSSYTAKLSAYGTLKSSLEAFQTANTALNKAD-LFTATSTSSSSTAFSATTTGS 89
Cdd:pfam02465   1 SGLDTDSIVDQLMAAERAPLDRLEQQKTTLEWKQSAYGELNSKLSSLQSALKALSSSStFNAKKATSSNESVVTATASSG 80

                          90
                  ....*....|....*..
gi 556358362   90 AIAGKYTISVSQLAQAQ 106
Cdd:pfam02465  81 AAAGSYSIEVTQLAQAQ 97
fliD PRK08724
flagellar filament capping protein FliD;
3-198 1.07e-12

flagellar filament capping protein FliD;


Pssm-ID: 236335 [Multi-domain]  Cd Length: 673  Bit Score: 70.29  E-value: 1.07e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362   3 SISSLGIGSGLKLADILDSLTTAEKA-QLTPITKQQSSYTAKLSAYGTLKSSLEAFQTANTALNKAD-LFTATSTSSSST 80
Cdd:PRK08724   2 SLGPMGMSGGMDINSMVSKIVDAERVpKQQRIDNERTDIDTSISAYGRLRESLDTMKNLMTNFRQEKaFAVRTVDTSDED 81

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  81 AFSATTTGSAIAGKYTISVSQLAQAQTLTTKNAQPDTKtaiatadskitFTAGN-----GKDPVTIDISaANSSLTGIRD 155
Cdd:PRK08724  82 VVSATATTDAIAGKYAIDVLQLAQSHKVASDVLDEDAK-----------FGPGKlqislGDKSFTLDVV-GNSKLVDIVR 149

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 556358362 156 AINKA--DAGVTASIINVGNGQyRLSITSTETGADNAVSISVSGD 198
Cdd:PRK08724 150 GINGAksNPGVRASIINDVEGP-RLILASNVSGKDNQIKISVDAE 193
fliD PRK08453
flagellar filament capping protein FliD;
99-381 2.86e-12

flagellar filament capping protein FliD;


Pssm-ID: 181432 [Multi-domain]  Cd Length: 673  Bit Score: 68.71  E-value: 2.86e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  99 VSQLAQAQTLTTKNAQPDTKTAIATADSKITFTAGNGKDPVTIDISAANSS---LTGIRDAINKADAGVTASiinvgNGQ 175
Cdd:PRK08453 304 AKELGFLQTTTQESDLLKSSRTIKEGKLEGVISIGGIKLDLSALTKEGNTSeenADAIAQAINAKAGLYAFK-----NAE 378

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 176 YRLSITStETGADNAVSISVSGDSALQSFMGYNGTSTDASNGMMESV------TAQNAKLKVNNVDIENSSNTISDALED 249
Cdd:PRK08453 379 GKLVINS-KTGMVTIKGEDALGKKSLKDLGLKAGTVQSYEASQETLFmsknlqKASDAKFTYNGVSITRPTNEVNDVISG 457

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 250 ITLNLNDVTTGNQ--TLTITKDTSKAETAMKAWVDAYNTLQDSFASLTKYtavdagtDAQDSSNGALLGDTTLRTIQTQL 327
Cdd:PRK08453 458 VNITLEQTTEPNKpaIISVSRDNQAIIDSLKEFVKAYNELIPKLDEDTRY-------DADTKIAGIFNGVGDIRSIRSSL 530

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 556358362 328 KTMLSNTV-GGTAYKTLSQVGITSDPStGKLELSSEKLKKALTDNPSAVKDLVVG 381
Cdd:PRK08453 531 NNVFSYSVhTDNGVESLMKYGLSLDEK-GVMTLDEAKLSSALNSDPKATQDFFYG 584
fliD PRK08724
flagellar filament capping protein FliD;
209-371 6.61e-09

flagellar filament capping protein FliD;


Pssm-ID: 236335 [Multi-domain]  Cd Length: 673  Bit Score: 58.34  E-value: 6.61e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 209 GTSTDASNGMMESVTAQNAKLKVNNV-DIENSSNTISDALEDITLNLNDVTTGNQT---LTITKDTSKAETAMKAWVDAY 284
Cdd:PRK08724 423 QSAFDLYSGMTEVQSAQDSMVVLDGVaQLSSNNNVIEDAIEGVDLTLKGKTDKNKPpaeIGVEYDRQSVRNDIEQFVAAY 502

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362 285 NTLQDSFASLtkytavdAGTDAQDSSNGALLGDTTLRTIQTQLKTMLSNTV--GGTAYKTLSQVGITSDpSTGKLELSSE 362
Cdd:PRK08724 503 NQFYQTSKAL-------SGVDPATGQKGPLAGDSTVRSADSRLKSVFSSSIeqAPENLKSLTEFGITTT-RQGTLEINYD 574


                 ....*....
gi 556358362 363 KLKKALTDN 371
Cdd:PRK08724 575 MLDRQLNNN 583
fliD PRK08453
flagellar filament capping protein FliD;
1-191 3.16e-04

flagellar filament capping protein FliD;


Pssm-ID: 181432 [Multi-domain]  Cd Length: 673  Bit Score: 43.29  E-value: 3.16e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362   1 MASISSLGIGSGLKLADILDSLTTA-EKAQLTPITK-------QQSSYTAKLSAYGTLKSSLEAFQTANTALNKadlfta 72
Cdd:PRK08453   3 IGSLSSLGLGSKVLNYDVIDKLKDAdEKALIAPLDKkmeqnveKQKALVEIKTLLSALKSPVKTLSDYSTYLSR------ 76

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556358362  73 TSTSSSSTAFSATTTGSAIAgKYTISVSQLAQAQTLTTKNAQPDTKTAIATADSKITFTAGnGKDpVTIDISAA---NSS 149
Cdd:PRK08453  77 KSNVTGDALSASVGAGVPIQ-DIKVDVQNLAQGDINELGAKFSSRDDVFSQVDTTLKFYTQ-GKD-YAIDIKAGmtlGDV 153

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 556358362 150 LTGIRDAINKADAGVTASiiNVGNGQYRLSITSTETGADNAV 191
Cdd:PRK08453 154 AQSITDATNGEVMGIVMK--TGGNDPYQLMINSKNTGEDNRI 193
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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