NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|556359649|ref|WP_023300725|]
View 

MULTISPECIES: two-component system QseEF-associated lipoprotein QseG [Enterobacter]

Protein Classification

two-component system QseEF-associated lipoprotein QseG( domain architecture ID 10013618)

two-component system QseEF-associated lipoprotein QseG is necessary for translocation of effector molecules into host epithelial cells, but is not involved in structural assembly of the type III secretion system (TTSS)

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
PRK10722 PRK10722
two-component system QseEF-associated lipoprotein QseG;
8-250 3.58e-118

two-component system QseEF-associated lipoprotein QseG;


:

Pssm-ID: 236745  Cd Length: 247  Bit Score: 337.35  E-value: 3.58e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556359649   8 MSHVFYRALRAVFSSKNVRLSLPCLLLAGCVTHAPKSAISHKQEDKWPQKQLADFLSTRCDDIWSLSGRDVESNPLFWLR 87
Cdd:PRK10722   1 QLVVLRHIFQRLLLRRLWLSGLPCLLLAGCVQNANKPAASTAAEEKIPEYQLADYRSTECDDIWALQGKAAENNPLYWLR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556359649  88 GIDCAQRLAPAEARAQAAMLVDDTWQDAFKRGIVMADARITPVERRANVTRLDTYVINIPPQVRPVYQLWRDGQTLQLQL 167
Cdd:PRK10722  81 AMDCADRLMPAQARAQAKRLPDDSWQNAFKQGILLADAKITPAERRQIVERLNAYSLQIPAQVRPLYQLWRDGQALQLAL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556359649 168 SEERFRYSKLQQSSDSELDALRQQQESLREQLETTTRKLENLTDIERQLSTRKPAGSYLPDGSKGNSAT-TPDSEMPKQE 246
Cdd:PRK10722 161 AEERQRYQKLQQSSDSELDALRQQQQRLQYQLELTTRKLENLTDIERQLSSRKQAGNFSPDTPEKPATSeESEAPAPSTD 240


                 ....
gi 556359649 247 DVKP 250
Cdd:PRK10722 241 EVTP 244
 
Name Accession Description Interval E-value
PRK10722 PRK10722
two-component system QseEF-associated lipoprotein QseG;
8-250 3.58e-118

two-component system QseEF-associated lipoprotein QseG;


Pssm-ID: 236745  Cd Length: 247  Bit Score: 337.35  E-value: 3.58e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556359649   8 MSHVFYRALRAVFSSKNVRLSLPCLLLAGCVTHAPKSAISHKQEDKWPQKQLADFLSTRCDDIWSLSGRDVESNPLFWLR 87
Cdd:PRK10722   1 QLVVLRHIFQRLLLRRLWLSGLPCLLLAGCVQNANKPAASTAAEEKIPEYQLADYRSTECDDIWALQGKAAENNPLYWLR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556359649  88 GIDCAQRLAPAEARAQAAMLVDDTWQDAFKRGIVMADARITPVERRANVTRLDTYVINIPPQVRPVYQLWRDGQTLQLQL 167
Cdd:PRK10722  81 AMDCADRLMPAQARAQAKRLPDDSWQNAFKQGILLADAKITPAERRQIVERLNAYSLQIPAQVRPLYQLWRDGQALQLAL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556359649 168 SEERFRYSKLQQSSDSELDALRQQQESLREQLETTTRKLENLTDIERQLSTRKPAGSYLPDGSKGNSAT-TPDSEMPKQE 246
Cdd:PRK10722 161 AEERQRYQKLQQSSDSELDALRQQQQRLQYQLELTTRKLENLTDIERQLSSRKQAGNFSPDTPEKPATSeESEAPAPSTD 240


                 ....
gi 556359649 247 DVKP 250
Cdd:PRK10722 241 EVTP 244
Lipoprotein_20 pfam13942
YfhG lipoprotein; This family includes the YfhG protein from E. coli. Members of this family ...
 55-229 2.93e-86

YfhG lipoprotein; This family includes the YfhG protein from E. coli. Members of this family have an N-terminal lipoprotein attachment site. The members of this family are functionally uncharacterized.


Pssm-ID: 433595  Cd Length: 175  Bit Score: 253.85  E-value: 2.93e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556359649   55 PQKQLADFLSTRCDDIWSLSGRDVESNPLFWLRGIDCAQRLAPAEARAQAAMLVDDTWQDAFKRGIVMADARITPVERRA 134
Cdd:pfam13942   1 PEEQVADYRIADCEDIWQLDDPAAMENALYWLRAMDCADRLSPAQARAMAKRLTDDSWQSAFKQGILLADAGITPQERRK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556359649  135 NVTRLDTYVINIPPQVRPVYQLWRDGQTLQLQLSEERFRYSKLQQSSDSELDALRQQQESLREQLETTTRKLENLTDIER 214
Cdd:pfam13942  81 IVERLNAYSLQFPVALRPLYQLWRDQQNLQLALAEERARYQRLQQDSDSKLDRLREQQQRLQYQLELTTRKLENLTDIER 160

                         170
                  ....*....|....*
gi 556359649  215 QLSTRKPAGSYLPDG 229
Cdd:pfam13942 161 QLSSRKQLQGDLPDN 175
PilO COG3167
Type IV pilus assembly protein PilO [Cell motility, Extracellular structures];
179-216 7.18e-03

Type IV pilus assembly protein PilO [Cell motility, Extracellular structures];


Pssm-ID: 442400 [Multi-domain]  Cd Length: 202  Bit Score: 36.46  E-value: 7.18e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 556359649 179 QSSDSELDALRQQQESLREQLETTTRKLENLTDIERQL 216
Cdd:COG3167   42 SPQLEELEELEAEEAQLKQELEKKQAKAANLPALKAQL 79
 
Name Accession Description Interval E-value
PRK10722 PRK10722
two-component system QseEF-associated lipoprotein QseG;
8-250 3.58e-118

two-component system QseEF-associated lipoprotein QseG;


Pssm-ID: 236745  Cd Length: 247  Bit Score: 337.35  E-value: 3.58e-118
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556359649   8 MSHVFYRALRAVFSSKNVRLSLPCLLLAGCVTHAPKSAISHKQEDKWPQKQLADFLSTRCDDIWSLSGRDVESNPLFWLR 87
Cdd:PRK10722   1 QLVVLRHIFQRLLLRRLWLSGLPCLLLAGCVQNANKPAASTAAEEKIPEYQLADYRSTECDDIWALQGKAAENNPLYWLR 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556359649  88 GIDCAQRLAPAEARAQAAMLVDDTWQDAFKRGIVMADARITPVERRANVTRLDTYVINIPPQVRPVYQLWRDGQTLQLQL 167
Cdd:PRK10722  81 AMDCADRLMPAQARAQAKRLPDDSWQNAFKQGILLADAKITPAERRQIVERLNAYSLQIPAQVRPLYQLWRDGQALQLAL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556359649 168 SEERFRYSKLQQSSDSELDALRQQQESLREQLETTTRKLENLTDIERQLSTRKPAGSYLPDGSKGNSAT-TPDSEMPKQE 246
Cdd:PRK10722 161 AEERQRYQKLQQSSDSELDALRQQQQRLQYQLELTTRKLENLTDIERQLSSRKQAGNFSPDTPEKPATSeESEAPAPSTD 240


                 ....
gi 556359649 247 DVKP 250
Cdd:PRK10722 241 EVTP 244
Lipoprotein_20 pfam13942
YfhG lipoprotein; This family includes the YfhG protein from E. coli. Members of this family ...
 55-229 2.93e-86

YfhG lipoprotein; This family includes the YfhG protein from E. coli. Members of this family have an N-terminal lipoprotein attachment site. The members of this family are functionally uncharacterized.


Pssm-ID: 433595  Cd Length: 175  Bit Score: 253.85  E-value: 2.93e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556359649   55 PQKQLADFLSTRCDDIWSLSGRDVESNPLFWLRGIDCAQRLAPAEARAQAAMLVDDTWQDAFKRGIVMADARITPVERRA 134
Cdd:pfam13942   1 PEEQVADYRIADCEDIWQLDDPAAMENALYWLRAMDCADRLSPAQARAMAKRLTDDSWQSAFKQGILLADAGITPQERRK 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556359649  135 NVTRLDTYVINIPPQVRPVYQLWRDGQTLQLQLSEERFRYSKLQQSSDSELDALRQQQESLREQLETTTRKLENLTDIER 214
Cdd:pfam13942  81 IVERLNAYSLQFPVALRPLYQLWRDQQNLQLALAEERARYQRLQQDSDSKLDRLREQQQRLQYQLELTTRKLENLTDIER 160

                         170
                  ....*....|....*
gi 556359649  215 QLSTRKPAGSYLPDG 229
Cdd:pfam13942 161 QLSSRKQLQGDLPDN 175
PilO COG3167
Type IV pilus assembly protein PilO [Cell motility, Extracellular structures];
179-216 7.18e-03

Type IV pilus assembly protein PilO [Cell motility, Extracellular structures];


Pssm-ID: 442400 [Multi-domain]  Cd Length: 202  Bit Score: 36.46  E-value: 7.18e-03
                         10        20        30
                 ....*....|....*....|....*....|....*...
gi 556359649 179 QSSDSELDALRQQQESLREQLETTTRKLENLTDIERQL 216
Cdd:COG3167   42 SPQLEELEELEAEEAQLKQELEKKQAKAANLPALKAQL 79
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH