|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15068 |
PRK15068 |
tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB; |
1-322 |
0e+00 |
|
tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;
Pssm-ID: 237898 Cd Length: 322 Bit Score: 662.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 1 MIEFGNFYQLIAKNHLSHWLETLPAQIAAWQRDQQHGLLKQWSNAVEFLPELTPHRLDLLHSVTAESEEPLPAGQINRIE 80
Cdd:PRK15068 1 MIDFSNFYQLIAKNPLSHWLETLPAQLAAWQREQLHGDFKKWEKALEQLPELTPDRLDLLDSVTIGSEEPLSEGQRKRIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 81 TLMRNLMPWRKGPFSLYGVNINTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPMQLFLCQ 160
Cdd:PRK15068 81 NLLRALMPWRKGPFSLFGIHIDTEWRSDWKWDRVLPHLSPLKGRTVLDVGCGNGYHMWRMLGAGAKLVVGIDPSQLFLCQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 161 FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVSGGELVLETLVIEGDEHAVLVPG 240
Cdd:PRK15068 161 FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLDHLKQLKDQLVPGGELVLETLVIDGDENTVLVPG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 241 DRYAQMRNVYFIPSALALKNWLEKCGFVDVRIADVCVTSVEEQRRTDWMITESLEQFLDPDDHSKTIEGYPAPMRAVLIA 320
Cdd:PRK15068 241 DRYAKMRNVYFIPSVPALKNWLERAGFKDVRIVDVSVTTTEEQRKTEWMTTESLADFLDPNDPSKTIEGYPAPKRAVLIA 320
|
..
gi 556393314 321 TK 322
Cdd:PRK15068 321 RK 322
|
|
| Methyltransf_9 |
pfam08003 |
Protein of unknown function (DUF1698); This family contains many hypothetical proteins. It ... |
7-322 |
0e+00 |
|
Protein of unknown function (DUF1698); This family contains many hypothetical proteins. It also includes two putative methyltransferase proteins, Swiss:Q8EEE6 and Swiss:Q88MX8.
Pssm-ID: 429781 [Multi-domain] Cd Length: 315 Bit Score: 619.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 7 FYQLIAKNHLSHWLETLPAQIAAWQrDQQHGLLKQWSNAVEFLPELTPHRLDLLHSVTAESEEPLPAGQINRIETLMRNL 86
Cdd:pfam08003 1 FYQQIADTNLSHWLNTLPAQLQTWQ-EQEHGDFKRWRKALEKLPRLKPDSIDLKNSVTAETEEPLSHGEQKRLEKLLRAL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 87 MPWRKGPFSLYGVNINTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPMQLFLCQFEAVRK 166
Cdd:pfam08003 80 MPWRKGPFHLFGVHIDTEWRSDWKWDRVLPHLSPLKGRTILDVGCGNGYHMWRMLGEGAAMVVGIDPSELFLCQFEAVRK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 167 LLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVSGGELVLETLVIEGDEHAVLVPGDRYAQM 246
Cdd:pfam08003 160 LLGNDQRAHLLPLGIEQLPALAAFDTVFSMGVLYHRRSPLDHLLQLKDQLVKGGELVLETLVIDGDENTVLVPGDRYAQM 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556393314 247 RNVYFIPSALALKNWLEKCGFVDVRIADVCVTSVEEQRRTDWMITESLEQFLDPDDHSKTIEGYPAPMRAVLIATK 322
Cdd:pfam08003 240 RNVYFIPSAAALINWLEKCGFVDVRIVDVSVTTLEEQRRTEWMENESLKDFLDPEDPSKTIEGYPAPKRAVLIARK 315
|
|
| TIGR00452 |
TIGR00452 |
tRNA (mo5U34)-methyltransferase; This model describes CmoB, the enzyme tRNA (mo5U34) ... |
7-321 |
0e+00 |
|
tRNA (mo5U34)-methyltransferase; This model describes CmoB, the enzyme tRNA (mo5U34)-methyltransferase involved in tRNA wobble base modification. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 273084 Cd Length: 316 Bit Score: 577.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 7 FYQLIAKNHLSHWLETLPAQIAAWQRDQQHGLLKQWSNAVEFLPELTPHRLDLLHS-VTAESEEPLPAGQINRIETLMRN 85
Cdd:TIGR00452 1 LYQALADTPLAHWLETLPAQLEAWLQPPRHGDLPRWQKALAQLPELPPSQVDLDSDaVTIGSAGDLSEGQRAQLENALRA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 86 LMPWRKGPFSLYGVNINTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPMQLFLCQFEAVR 165
Cdd:TIGR00452 81 LMPWRKGPFELFGIHIDTEWRSDWKWDRLAPHISPLKGRRVLDVGCGNGYHMWRMLGAGAKLVVGIDPSLLFLMQFLAIK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 166 KLLGNDqRAHLLPLGIEQLPA-LKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVSGGELVLETLVIEGDEHAVLVPGDRYA 244
Cdd:TIGR00452 161 HLLGDA-PVHFLPLGIEDLPPnLKAFDTVFSMGVLYHRRSPLDHLLQLKDQLRPGGELVLETLVIDGDEGTVLVPEDRYA 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 556393314 245 QMRNVYFIPSALALKNWLEKCGFVDVRIADVCVTSVEEQRRTDWMITESLEQFLDPDDHSKTIEGYPAPMRAVLIAT 321
Cdd:TIGR00452 240 QMRNVWFLPSVAALKNWLERCGFKDVRCVDVSVTSTEEQRSTDWMTFESLADFLDPEDPSLTIEGYPAPKRAVLIAR 316
|
|
| UbiG |
COG2227 |
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ... |
102-226 |
2.23e-22 |
|
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 441829 [Multi-domain] Cd Length: 126 Bit Score: 90.46 E-value: 2.23e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 102 NTEWRSDWkWDRVLPHLSD---LTGRTILDVGCGSGYHMWRMIGAGAHlAVGIDPMQLFLcqfeAVRKLLGNDQRAHLLP 178
Cdd:COG2227 2 SDPDARDF-WDRRLAALLArllPAGGRVLDVGCGTGRLALALARRGAD-VTGVDISPEAL----EIARERAAELNVDFVQ 75
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 556393314 179 LGIEQLP-ALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVSGGELVLET 226
Cdd:COG2227 76 GDLEDLPlEDGSFDLVICSEVLEHLPDPAALLRELARLLKPGGLLLLST 124
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
125-229 |
5.87e-05 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 41.65 E-value: 5.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 125 TILDVGCGSGYHMWRMIGAGAHLAVGIDPMQLFLcQFEAVRKLLGNDQRAHLLPLGIEQLP--ALKAFDTVFSMGVLYHR 202
Cdd:cd02440 1 RVLDLGCGTGALALALASGPGARVTGVDISPVAL-ELARKAAAALLADNVEVLKGDAEELPpeADESFDVIISDPPLHHL 79
|
90 100
....*....|....*....|....*...
gi 556393314 203 -RSPLEHLWQLKDQLVSGGELVLETLVI 229
Cdd:cd02440 80 vEDLARFLEEARRLLKPGGVLVLTLVLA 107
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PRK15068 |
PRK15068 |
tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB; |
1-322 |
0e+00 |
|
tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB;
Pssm-ID: 237898 Cd Length: 322 Bit Score: 662.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 1 MIEFGNFYQLIAKNHLSHWLETLPAQIAAWQRDQQHGLLKQWSNAVEFLPELTPHRLDLLHSVTAESEEPLPAGQINRIE 80
Cdd:PRK15068 1 MIDFSNFYQLIAKNPLSHWLETLPAQLAAWQREQLHGDFKKWEKALEQLPELTPDRLDLLDSVTIGSEEPLSEGQRKRIE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 81 TLMRNLMPWRKGPFSLYGVNINTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPMQLFLCQ 160
Cdd:PRK15068 81 NLLRALMPWRKGPFSLFGIHIDTEWRSDWKWDRVLPHLSPLKGRTVLDVGCGNGYHMWRMLGAGAKLVVGIDPSQLFLCQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 161 FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVSGGELVLETLVIEGDEHAVLVPG 240
Cdd:PRK15068 161 FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLDHLKQLKDQLVPGGELVLETLVIDGDENTVLVPG 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 241 DRYAQMRNVYFIPSALALKNWLEKCGFVDVRIADVCVTSVEEQRRTDWMITESLEQFLDPDDHSKTIEGYPAPMRAVLIA 320
Cdd:PRK15068 241 DRYAKMRNVYFIPSVPALKNWLERAGFKDVRIVDVSVTTTEEQRKTEWMTTESLADFLDPNDPSKTIEGYPAPKRAVLIA 320
|
..
gi 556393314 321 TK 322
Cdd:PRK15068 321 RK 322
|
|
| Methyltransf_9 |
pfam08003 |
Protein of unknown function (DUF1698); This family contains many hypothetical proteins. It ... |
7-322 |
0e+00 |
|
Protein of unknown function (DUF1698); This family contains many hypothetical proteins. It also includes two putative methyltransferase proteins, Swiss:Q8EEE6 and Swiss:Q88MX8.
Pssm-ID: 429781 [Multi-domain] Cd Length: 315 Bit Score: 619.04 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 7 FYQLIAKNHLSHWLETLPAQIAAWQrDQQHGLLKQWSNAVEFLPELTPHRLDLLHSVTAESEEPLPAGQINRIETLMRNL 86
Cdd:pfam08003 1 FYQQIADTNLSHWLNTLPAQLQTWQ-EQEHGDFKRWRKALEKLPRLKPDSIDLKNSVTAETEEPLSHGEQKRLEKLLRAL 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 87 MPWRKGPFSLYGVNINTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPMQLFLCQFEAVRK 166
Cdd:pfam08003 80 MPWRKGPFHLFGVHIDTEWRSDWKWDRVLPHLSPLKGRTILDVGCGNGYHMWRMLGEGAAMVVGIDPSELFLCQFEAVRK 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 167 LLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVSGGELVLETLVIEGDEHAVLVPGDRYAQM 246
Cdd:pfam08003 160 LLGNDQRAHLLPLGIEQLPALAAFDTVFSMGVLYHRRSPLDHLLQLKDQLVKGGELVLETLVIDGDENTVLVPGDRYAQM 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 556393314 247 RNVYFIPSALALKNWLEKCGFVDVRIADVCVTSVEEQRRTDWMITESLEQFLDPDDHSKTIEGYPAPMRAVLIATK 322
Cdd:pfam08003 240 RNVYFIPSAAALINWLEKCGFVDVRIVDVSVTTLEEQRRTEWMENESLKDFLDPEDPSKTIEGYPAPKRAVLIARK 315
|
|
| TIGR00452 |
TIGR00452 |
tRNA (mo5U34)-methyltransferase; This model describes CmoB, the enzyme tRNA (mo5U34) ... |
7-321 |
0e+00 |
|
tRNA (mo5U34)-methyltransferase; This model describes CmoB, the enzyme tRNA (mo5U34)-methyltransferase involved in tRNA wobble base modification. [Unknown function, Enzymes of unknown specificity]
Pssm-ID: 273084 Cd Length: 316 Bit Score: 577.60 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 7 FYQLIAKNHLSHWLETLPAQIAAWQRDQQHGLLKQWSNAVEFLPELTPHRLDLLHS-VTAESEEPLPAGQINRIETLMRN 85
Cdd:TIGR00452 1 LYQALADTPLAHWLETLPAQLEAWLQPPRHGDLPRWQKALAQLPELPPSQVDLDSDaVTIGSAGDLSEGQRAQLENALRA 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 86 LMPWRKGPFSLYGVNINTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPMQLFLCQFEAVR 165
Cdd:TIGR00452 81 LMPWRKGPFELFGIHIDTEWRSDWKWDRLAPHISPLKGRRVLDVGCGNGYHMWRMLGAGAKLVVGIDPSLLFLMQFLAIK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 166 KLLGNDqRAHLLPLGIEQLPA-LKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVSGGELVLETLVIEGDEHAVLVPGDRYA 244
Cdd:TIGR00452 161 HLLGDA-PVHFLPLGIEDLPPnLKAFDTVFSMGVLYHRRSPLDHLLQLKDQLRPGGELVLETLVIDGDEGTVLVPEDRYA 239
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 556393314 245 QMRNVYFIPSALALKNWLEKCGFVDVRIADVCVTSVEEQRRTDWMITESLEQFLDPDDHSKTIEGYPAPMRAVLIAT 321
Cdd:TIGR00452 240 QMRNVWFLPSVAALKNWLERCGFKDVRCVDVSVTSTEEQRSTDWMTFESLADFLDPEDPSLTIEGYPAPKRAVLIAR 316
|
|
| UbiG |
COG2227 |
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and ... |
102-226 |
2.23e-22 |
|
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme transport and metabolism]; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase is part of the Pathway/BioSystem: Ubiquinone biosynthesis
Pssm-ID: 441829 [Multi-domain] Cd Length: 126 Bit Score: 90.46 E-value: 2.23e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 102 NTEWRSDWkWDRVLPHLSD---LTGRTILDVGCGSGYHMWRMIGAGAHlAVGIDPMQLFLcqfeAVRKLLGNDQRAHLLP 178
Cdd:COG2227 2 SDPDARDF-WDRRLAALLArllPAGGRVLDVGCGTGRLALALARRGAD-VTGVDISPEAL----EIARERAAELNVDFVQ 75
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 556393314 179 LGIEQLP-ALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVSGGELVLET 226
Cdd:COG2227 76 GDLEDLPlEDGSFDLVICSEVLEHLPDPAALLRELARLLKPGGLLLLST 124
|
|
| UbiE |
COG2226 |
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; ... |
111-267 |
2.48e-14 |
|
Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG [Coenzyme transport and metabolism]; Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG is part of the Pathway/BioSystem: Biotin biosynthesis
Pssm-ID: 441828 [Multi-domain] Cd Length: 143 Bit Score: 68.87 E-value: 2.48e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 111 WDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLaVGIDPMQLFLCQfeAVRKLLGNDQRAHLLPLGIEQLP-ALKA 189
Cdd:COG2226 11 REALLAALGLRPGARVLDLGCGTGRLALALAERGARV-TGVDISPEMLEL--ARERAAEAGLNVEFVVGDAEDLPfPDGS 87
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 556393314 190 FDTVFSMGVLYHRRSPLEHLWQLKDQLVSGGELVLETlviegdehavlvpgdryaqmrnvYFIPSALALKNWLEKCGF 267
Cdd:COG2226 88 FDLVISSFVLHHLPDPERALAEIARVLKPGGRLVVVD-----------------------FSPPDLAELEELLAEAGF 142
|
|
| Methyltransf_25 |
pfam13649 |
Methyltransferase domain; This family appears to be a methyltransferase domain. |
126-201 |
5.81e-09 |
|
Methyltransferase domain; This family appears to be a methyltransferase domain.
Pssm-ID: 463945 [Multi-domain] Cd Length: 96 Bit Score: 52.57 E-value: 5.81e-09
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 556393314 126 ILDVGCGSGYHMWRMIGAGAHLAVGIDPMQLFLCQfeAVRKLLGNDQRAHLLPLGIEQLPALKA-FDTVFSMGVLYH 201
Cdd:pfam13649 1 VLDLGCGTGRLTLALARRGGARVTGVDLSPEMLER--ARERAAEAGLNVEFVQGDAEDLPFPDGsFDLVVSSGVLHH 75
|
|
| SmtA |
COG0500 |
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, ... |
115-225 |
2.17e-08 |
|
SAM-dependent methyltransferase [Secondary metabolites biosynthesis, transport and catabolism, General function prediction only];
Pssm-ID: 440266 [Multi-domain] Cd Length: 199 Bit Score: 53.38 E-value: 2.17e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 115 LPHLSDltGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPMQLFL--CQFEAVRKLLGNdqrAHLLPLGIEQLPALKA--F 190
Cdd:COG0500 21 LERLPK--GGRVLDLGCGTGRNLLALAARFGGRVIGIDLSPEAIalARARAAKAGLGN---VEFLVADLAELDPLPAesF 95
|
90 100 110
....*....|....*....|....*....|....*..
gi 556393314 191 DTVFSMGVLYH-RRSPLEHLWQ-LKDQLVSGGELVLE 225
Cdd:COG0500 96 DLVVAFGVLHHlPPEEREALLReLARALKPGGVLLLS 132
|
|
| Tam |
COG4106 |
Trans-aconitate methyltransferase [Energy production and conversion]; |
123-226 |
1.02e-07 |
|
Trans-aconitate methyltransferase [Energy production and conversion];
Pssm-ID: 443282 [Multi-domain] Cd Length: 100 Bit Score: 49.05 E-value: 1.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 123 GRTILDVGCGSGYHMWRMIGA--GAHLaVGIDPMQLFLcqfEAVRKLLGNdqrAHLLPLGIEQLPALKAFDTVFSMGVLY 200
Cdd:COG4106 2 PRRVLDLGCGTGRLTALLAERfpGARV-TGVDLSPEML---ARARARLPN---VRFVVADLRDLDPPEPFDLVVSNAALH 74
|
90 100
....*....|....*....|....*.
gi 556393314 201 HRRSPLEHLWQLKDQLVSGGELVLET 226
Cdd:COG4106 75 WLPDHAALLARLAAALAPGGVLAVQV 100
|
|
| Methyltransf_23 |
pfam13489 |
Methyltransferase domain; This family appears to be a methyltransferase domain. |
122-270 |
1.38e-07 |
|
Methyltransferase domain; This family appears to be a methyltransferase domain.
Pssm-ID: 404385 [Multi-domain] Cd Length: 162 Bit Score: 50.50 E-value: 1.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 122 TGRTILDVGCGSGyHMWRMIGAGAHLAVGIDPMqlflcqFEAVRKLLGNDQRAHLLPlgIEQLPALKAFDTVFSMGVLYH 201
Cdd:pfam13489 22 SPGRVLDFGCGTG-IFLRLLRAQGFSVTGVDPS------PIAIERALLNVRFDQFDE--QEAAVPAGKFDVIVAREVLEH 92
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 556393314 202 RRSPLEHLWQLKDQLVSGGELVLETLvieGDEHAVLVPGDRYAQMRNVY---FIPSALALKNWLEKCGFVDV 270
Cdd:pfam13489 93 VPDPPALLRQIAALLKPGGLLLLSTP---LASDEADRLLLEWPYLRPRNghiSLFSARSLKRLLEEAGFEVV 161
|
|
| Cfa |
COG2230 |
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport ... |
104-226 |
6.15e-07 |
|
Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases [Lipid transport and metabolism];
Pssm-ID: 441831 [Multi-domain] Cd Length: 158 Bit Score: 48.39 E-value: 6.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 104 EWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPMQLFLCQFEAVRKLLGNDQRAHLLPLGIEQ 183
Cdd:COG2230 33 EEAQEAKLDLILRKLGLKPGMRVLDIGCGWGGLALYLARRYGVRVTGVTLSPEQLEYARERAAEAGLADRVEVRLADYRD 112
|
90 100 110 120
....*....|....*....|....*....|....*....|....*
gi 556393314 184 LPALKAFDTVFSMGVLYH--RRSPLEHLWQLKDQLVSGGELVLET 226
Cdd:COG2230 113 LPADGQFDAIVSIGMFEHvgPENYPAYFAKVARLLKPGGRLLLHT 157
|
|
| Methyltransf_31 |
pfam13847 |
Methyltransferase domain; This family appears to have methyltransferase activity. |
125-232 |
4.24e-06 |
|
Methyltransferase domain; This family appears to have methyltransferase activity.
Pssm-ID: 463998 [Multi-domain] Cd Length: 150 Bit Score: 45.87 E-value: 4.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 125 TILDVGCGSGYHMWRM---IGAGAHLaVGID--PMQLFLCQFEAVRKLLGNdqrAHLLPLGIEQLP---ALKAFDTVFSM 196
Cdd:pfam13847 6 RVLDLGCGTGHLSFELaeeLGPNAEV-VGIDisEEAIEKARENAQKLGFDN---VEFEQGDIEELPellEDDKFDVVISN 81
|
90 100 110
....*....|....*....|....*....|....*.
gi 556393314 197 GVLYHRRSPLEHLWQLKDQLVSGGELVLETLVIEGD 232
Cdd:pfam13847 82 CVLNHIPDPDKVLQEILRVLKPGGRLIISDPDSLAE 117
|
|
| Methyltransf_11 |
pfam08241 |
Methyltransferase domain; Members of this family are SAM dependent methyltransferases. |
127-224 |
2.73e-05 |
|
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
Pssm-ID: 462406 [Multi-domain] Cd Length: 94 Bit Score: 42.27 E-value: 2.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 127 LDVGCGSGYHMWRMIGAGAHLaVGIDPMQLFLcqfeAVRKLLGNDQRAHLLPLGIEQLP-ALKAFDTVFSMGVLYHRRSP 205
Cdd:pfam08241 1 LDVGCGTGLLTELLARLGARV-TGVDISPEML----ELAREKAPREGLTFVVGDAEDLPfPDNSFDLVLSSEVLHHVEDP 75
|
90
....*....|....*....
gi 556393314 206 LEHLWQLKDQLVSGGELVL 224
Cdd:pfam08241 76 ERALREIARVLKPGGILII 94
|
|
| AdoMet_MTases |
cd02440 |
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; ... |
125-229 |
5.87e-05 |
|
S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). There are at least five structurally distinct families of AdoMet-MTases, class I being the largest and most diverse. Within this class enzymes can be classified by different substrate specificities (small molecules, lipids, nucleic acids, etc.) and different target atoms for methylation (nitrogen, oxygen, carbon, sulfur, etc.).
Pssm-ID: 100107 [Multi-domain] Cd Length: 107 Bit Score: 41.65 E-value: 5.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 125 TILDVGCGSGYHMWRMIGAGAHLAVGIDPMQLFLcQFEAVRKLLGNDQRAHLLPLGIEQLP--ALKAFDTVFSMGVLYHR 202
Cdd:cd02440 1 RVLDLGCGTGALALALASGPGARVTGVDISPVAL-ELARKAAAALLADNVEVLKGDAEELPpeADESFDVIISDPPLHHL 79
|
90 100
....*....|....*....|....*...
gi 556393314 203 -RSPLEHLWQLKDQLVSGGELVLETLVI 229
Cdd:cd02440 80 vEDLARFLEEARRLLKPGGVLVLTLVLA 107
|
|
| PRK07580 |
PRK07580 |
Mg-protoporphyrin IX methyl transferase; Validated |
115-209 |
2.88e-04 |
|
Mg-protoporphyrin IX methyl transferase; Validated
Pssm-ID: 236059 [Multi-domain] Cd Length: 230 Bit Score: 41.36 E-value: 2.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 115 LPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHL-AVGIDPmQLFLcqfEAVRKL--LGNDQRAHLLPLGIEQLpaLKAFD 191
Cdd:PRK07580 56 LPADGDLTGLRILDAGCGVGSLSIPLARRGAKVvASDISP-QMVE---EARERApeAGLAGNITFEVGDLESL--LGRFD 129
|
90 100
....*....|....*....|...
gi 556393314 192 TVFSMGVLYHRRSP-----LEHL 209
Cdd:PRK07580 130 TVVCLDVLIHYPQEdaarmLAHL 152
|
|
| COG4976 |
COG4976 |
Predicted methyltransferase, contains TPR repeat [General function prediction only]; |
112-234 |
4.65e-04 |
|
Predicted methyltransferase, contains TPR repeat [General function prediction only];
Pssm-ID: 444001 [Multi-domain] Cd Length: 181 Bit Score: 40.37 E-value: 4.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 112 DRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLaVGIDPMQlflcqfEAVRKLLGNDQRAHLLPLGIEQLPAL-KAF 190
Cdd:COG4976 36 EELLARLPPGPFGRVLDLGCGTGLLGEALRPRGYRL-TGVDLSE------EMLAKAREKGVYDRLLVADLADLAEPdGRF 108
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 556393314 191 DTVFSMGVLYHRRSPLEHLWQLKDQLVSGGELVLETLVIEGDEH 234
Cdd:COG4976 109 DLIVAADVLTYLGDLAAVFAGVARALKPGGLFIFSVEDADGSGR 152
|
|
| COG2263 |
COG2263 |
Predicted RNA methylase [General function prediction only]; |
120-195 |
9.40e-04 |
|
Predicted RNA methylase [General function prediction only];
Pssm-ID: 441864 [Multi-domain] Cd Length: 199 Bit Score: 39.89 E-value: 9.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 120 DLTGRTILDVGCGSGyhmwrMIGAGAHLA-------VGIDPMQLFLcqfeAVRKLLGNDQRAHLLPLGIEQLPALKAFDT 192
Cdd:COG2263 43 DIEGKTVLDLGCGTG-----MLAIGAALLgakkvvgVDIDPEALEI----ARENAERLGVRVDFIRADVTRIPLGGSVDT 113
|
...
gi 556393314 193 VFS 195
Cdd:COG2263 114 VVM 116
|
|
| Methyltransf_12 |
pfam08242 |
Methyltransferase domain; Members of this family are SAM dependent methyltransferases. |
127-222 |
3.17e-03 |
|
Methyltransferase domain; Members of this family are SAM dependent methyltransferases.
Pssm-ID: 400515 [Multi-domain] Cd Length: 98 Bit Score: 36.58 E-value: 3.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556393314 127 LDVGCGSGYHMWRMIGAGAHLA-VGID--PMQLFLCQFEAVRKLLGNDQRAHLLPLGIEQLPaLKAFDTVFSMGVLYH-- 201
Cdd:pfam08242 1 LEIGCGTGTLLRALLEALPGLEyTGLDisPAALEAARERLAALGLLNAVRVELFQLDLGELD-PGSFDVVVASNVLHHla 79
|
90 100
....*....|....*....|..
gi 556393314 202 -RRSPLEHLWQLkdqLVSGGEL 222
Cdd:pfam08242 80 dPRAVLRNIRRL---LKPGGVL 98
|
|
| |
