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Conserved domains on  [gi|556485530|ref|WP_023333814|]
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MULTISPECIES: amino acid permease [Enterobacter]

Protein Classification

amino acid permease( domain architecture ID 11484921)

amino acid permease facilitates the transport of amino acids; similar to Escherichia coli transport protein YifK, which is a probable amino-acid or metabolite transport protein

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
PRK10746 PRK10746
putative transport protein YifK; Provisional
1-461 0e+00

putative transport protein YifK; Provisional


:

Pssm-ID: 182694  Cd Length: 461  Bit Score: 812.13  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   1 MAEKQPELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYA 80
Cdd:PRK10746   1 MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  81 HRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTT 160
Cdd:PRK10746  81 HRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 161 IIVMIVVGLGVIFFGFGNGGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV 240
Cdd:PRK10746 161 IIVMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 241 LWRILIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLP 320
Cdd:PRK10746 241 LWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLP 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 321 AAMSKVSRAGVPVAGVAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKAIESHPFRS 400
Cdd:PRK10746 321 AAMAKVSRHGVPVAGVAVSILILLVGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRS 400
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556485530 401 ILFPYANYLTMAFLICVLIGMYFNEDTRMSLFVGMIFLAAVTAAYKLFGLGRRATTQKVEE 461
Cdd:PRK10746 401 ILFPWANYLTMAFLICVLIGMYFNEDTRMSLFVGIIFLLAVTLIYKVFGLNRHGKAHKLEE 461
 
Name Accession Description Interval E-value
PRK10746 PRK10746
putative transport protein YifK; Provisional
1-461 0e+00

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 812.13  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   1 MAEKQPELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYA 80
Cdd:PRK10746   1 MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  81 HRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTT 160
Cdd:PRK10746  81 HRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 161 IIVMIVVGLGVIFFGFGNGGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV 240
Cdd:PRK10746 161 IIVMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 241 LWRILIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLP 320
Cdd:PRK10746 241 LWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLP 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 321 AAMSKVSRAGVPVAGVAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKAIESHPFRS 400
Cdd:PRK10746 321 AAMAKVSRHGVPVAGVAVSILILLVGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRS 400
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556485530 401 ILFPYANYLTMAFLICVLIGMYFNEDTRMSLFVGMIFLAAVTAAYKLFGLGRRATTQKVEE 461
Cdd:PRK10746 401 ILFPWANYLTMAFLICVLIGMYFNEDTRMSLFVGIIFLLAVTLIYKVFGLNRHGKAHKLEE 461
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-453 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 609.43  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   2 AEKQPELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAH 81
Cdd:COG1113    7 ASEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAR 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  82 RYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTI 161
Cdd:COG1113   87 EYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAI 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 162 IVMIVVGLGVIFFGFG-NGGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV 240
Cdd:COG1113  167 VAFIVVGLLLIFFGFGlPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSV 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 241 LWRILIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLP 320
Cdd:COG1113  247 IWRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAP 326
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 321 AAMSKVSRAGVPVAGVAVSIAILLIGSCLNYIIpnPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKA-IESHPFR 399
Cdd:COG1113  327 KFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLL--PEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREgAAALKFK 404
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....
gi 556485530 400 SILFPYANYLTMAFLICVLIGMYFNEDTRMSLFVGMIFLAAVTAAYKLFGLGRR 453
Cdd:COG1113  405 MPGFPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
7-448 2.47e-98

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 302.56  E-value: 2.47e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530    7 ELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSP 86
Cdd:TIGR01773   9 KLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGR 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   87 FFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTIIVMIV 166
Cdd:TIGR01773  89 WAGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFII 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  167 VGLGVIfFGFGNGGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILI 246
Cdd:TIGR01773 169 LGAVAI-FGFAPGSEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRIIV 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  247 FYVGAIFVIVTIFPWNEIGTTGS-PFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLPAAMSK 325
Cdd:TIGR01773 248 FYLGSIFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVFMK 327
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  326 VSRAGVPVAGVAVSIAILLIGSCLNYIipNPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKAIESHPFRSILFPY 405
Cdd:TIGR01773 328 LNKKGVPVQAVLASTFFSFLTVVVNYF--APDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANGEAIKIRMWLYPW 405
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 556485530  406 ANYLTMAFLICVLIGMYFNEDTRMSLFVGMIFLAAVTAAYKLF 448
Cdd:TIGR01773 406 LTWLVIIFICGILVSMLFIPSMRDEVLLTGLLTIIVLCSYLVF 448
AA_permease pfam00324
Amino acid permease;
16-423 1.28e-87

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 275.35  E-value: 1.28e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   16 HIELIALGGTIGVGLFMGSASTLKWAGP-SVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAW 94
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   95 SYWFMWMAVGISEITAIGVYVQFW--FPDM-VQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTIIVMIVVglGV 171
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIpYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIV--GI 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  172 IFFGFGNGGHAIGFGNLTENGG---FFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILIFY 248
Cdd:pfam00324 159 ILLSGGNPNDGAIFRYLGDNGGknnFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFY 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  249 VGAIFVIVTIFPWNEIG------TTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLPAA 322
Cdd:pfam00324 239 ILSLLAIGLLVPWNDPGllndsaSAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKF 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  323 MSKVSRAGVPVAGVAVSIAILLIGSCLNYIipNPQRVFVYVYSASVLPGMVPWFVILISQLRFR---HAHKKAIESHPFR 399
Cdd:pfam00324 319 LKKVDKRGVPLRAILVSMVISLLALLLASL--NPAIVFNFLLAISGLSGLIVWGLISLSHLRFRkafKYQGRSIDELPFK 396
                         410       420
                  ....*....|....*....|....
gi 556485530  400 SILFPYANYLTMAFLICVLIGMYF 423
Cdd:pfam00324 397 APLGPLGVILGLAAIIIILIIQFL 420
 
Name Accession Description Interval E-value
PRK10746 PRK10746
putative transport protein YifK; Provisional
1-461 0e+00

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 812.13  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   1 MAEKQPELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYA 80
Cdd:PRK10746   1 MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  81 HRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTT 160
Cdd:PRK10746  81 HRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTT 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 161 IIVMIVVGLGVIFFGFGNGGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV 240
Cdd:PRK10746 161 IIVMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 241 LWRILIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLP 320
Cdd:PRK10746 241 LWRILIFYVGAIFVIVTIFPWNEIGSNGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLP 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 321 AAMSKVSRAGVPVAGVAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKAIESHPFRS 400
Cdd:PRK10746 321 AAMAKVSRHGVPVAGVAVSILILLVGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAAIASHPFRS 400
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556485530 401 ILFPYANYLTMAFLICVLIGMYFNEDTRMSLFVGMIFLAAVTAAYKLFGLGRRATTQKVEE 461
Cdd:PRK10746 401 ILFPWANYLTMAFLICVLIGMYFNEDTRMSLFVGIIFLLAVTLIYKVFGLNRHGKAHKLEE 461
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
2-453 0e+00

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 609.43  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   2 AEKQPELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAH 81
Cdd:COG1113    7 ASEEEGLKRGLKNRHIQMIALGGAIGTGLFLGSGKAIALAGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAR 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  82 RYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTI 161
Cdd:COG1113   87 EYLGPWAGFVTGWLYWFFWVLVGMAEATAVGIYLQFWFPDVPQWVWALVFLVLLTAINLLSVKLFGEFEFWFALIKVVAI 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 162 IVMIVVGLGVIFFGFG-NGGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV 240
Cdd:COG1113  167 VAFIVVGLLLIFFGFGlPGGPPAGLSNLWDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPEKTIPKAINSV 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 241 LWRILIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLP 320
Cdd:COG1113  247 IWRILLFYVGSLFVILALVPWNQIGAGGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTSRMLYSLAERGDAP 326
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 321 AAMSKVSRAGVPVAGVAVSIAILLIGSCLNYIIpnPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKA-IESHPFR 399
Cdd:COG1113  327 KFFGKLSKRGVPVRAILLSAVVLLIGVVLNYLL--PEKAFTFLLSISGFGALFVWLMILVSQLKFRRRLPREgAAALKFK 404
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....
gi 556485530 400 SILFPYANYLTMAFLICVLIGMYFNEDTRMSLFVGMIFLAAVTAAYKLFGLGRR 453
Cdd:COG1113  405 MPGFPYTSYLTLAFLAAVLVLMAFDPDTRIALIVGPVWLALLVVGYFLVRRRRA 458
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
2-448 1.90e-154

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 446.54  E-value: 1.90e-154
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   2 AEKQPELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGP-SVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYA 80
Cdd:COG0833    4 SEKQNKLKRGLKSRHLSMIALGGVIGTGLFLASGYTISQAGPgGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYA 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  81 HRYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTT 160
Cdd:COG0833   84 TRFIDPAFGFAVGWNYWLNWAITVAAELTAAGIIMQYWFPDVPVWIWSLLFLALIFLLNALSVKAFGESEFWFSLIKVIT 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 161 IIVMIVVGLGVIFfGFgNGGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV 240
Cdd:COG0833  164 VIAFIIVGLLMIF-GI-IGGHAPGFSNFTTGDGPFPGGFLAILGVMMIVGFSFQGTELIGIAAGESENPEKTIPKAIRQV 241
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 241 LWRILIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLP 320
Cdd:COG0833  242 FWRILLFYILAIFVIAALIPYTDAGVAESPFTLVFERAGIPYAADIMNAVILTAVLSAGNSGLYASTRMLWSLAKEGMAP 321
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 321 AAMSKVSRAGVPVAGVAVSIAILLIgsCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKA---IESHP 397
Cdd:COG0833  322 KIFAKLNKRGVPLNALLATMAVGLL--ALLSSFFGAGTVYLWLLSISGLTGFIAWLGIAISHYRFRRAYVAQggdLEDLK 399
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|.
gi 556485530 398 FRSILFPYANYLTMAFLICVLIGMYFNEDTRMSLFVGMIFLAAVTAAYKLF 448
Cdd:COG0833  400 YKAPLFPFGPIFAFILCLIVIIGQAFDPEQRIALYIGIPFFLACYLGYKLK 450
proY PRK10580
putative proline-specific permease; Provisional
2-447 2.14e-125

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 372.23  E-value: 2.14e-125
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   2 AEKQPELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAH 81
Cdd:PRK10580   1 MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSVLLAYIIGGVAAYIIMRALGEMSVHNPAASSFSRYAQ 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  82 RYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTI 161
Cdd:PRK10580  81 ENLGPLAGYITGWTYCFEILIVAIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 162 IVMIVVGLGVIFFGFGNGGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVL 241
Cdd:PRK10580 161 IIMIVAGIGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVP 240
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 242 WRILIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLPA 321
Cdd:PRK10580 241 MRILVFYVGTLFVIMSIYPWNQVGTNGSPFVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPK 320
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 322 AMSKVSRAGVPVAGVAVSIAILLIGSCLNYIIpnPQRVFVYVYSASVLPGMVPWFVILISQLRFRH----AHKKAIEsHP 397
Cdd:PRK10580 321 IFSKTSRRGIPWVTVLVMTTALLFAVYLNYIM--PENVFLVIASLATFATVWVWIMILLSQIAFRRrlppEEVKALK-FK 397
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|
gi 556485530 398 FRSILFPYANYLTMAFLICVLIGMYfnEDTRMSLFVGMIFLAAVTAAYKL 447
Cdd:PRK10580 398 VPGGVATTIGGLIFLVFIIGLIGYH--PDTRISLYVGFAWIVLLLIGWMF 445
PRK10249 PRK10249
phenylalanine transporter; Provisional
2-447 9.68e-125

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 370.47  E-value: 9.68e-125
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   2 AEKQPELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAH 81
Cdd:PRK10249  13 SNQEPTLHRGLHNRHIQLIALGGAIGTGLFLGIGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAY 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  82 RYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTI 161
Cdd:PRK10249  93 KYWGPFAGFLSGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAI 172
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 162 IVMIVVGLGVIFfgFGNGGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVL 241
Cdd:PRK10249 173 IGMIGFGLWLLF--SGHGGEKASIDNLWRYGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVV 250
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 242 WRILIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLPA 321
Cdd:PRK10249 251 YRILLFYIGSLVVLLALYPWVEVKSNSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPK 330
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 322 AMSKVSRAGVPVAGVAVSIAILLIGSCLNYIIpnPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKAIESHPFRSI 401
Cdd:PRK10249 331 FLTRVSRRGVPINSLMLSGAITSLVVLINYLL--PQKAFGLLMALVVATLLLNWIMICLAHLRFRAAMRRQGRETQFKAL 408
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*.
gi 556485530 402 LFPYANYLTMAFLICVLIGMYFNEDTRMSLFVGMIFLAAVTAAYKL 447
Cdd:PRK10249 409 LYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFVAFKT 454
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
2-458 1.74e-123

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 367.52  E-value: 1.74e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   2 AEKQPELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAH 81
Cdd:PRK11049  12 APAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFAS 91
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  82 RYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTI 161
Cdd:PRK11049  92 DLLGPWAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVASLAVVLLLLSLNLATVKMFGEMEFWFAMIKIVAI 171
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 162 IVMIVVGLGVIFFGFGN-GGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKV 240
Cdd:PRK11049 172 VALIVVGLVMVAMHFQSpTGVEASFAHLWNDGGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSI 251
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 241 LWRILIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLP 320
Cdd:PRK11049 252 PIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAP 331
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 321 AAMSKVSRAGVPVAGVAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFR----HAHKKAIESH 396
Cdd:PRK11049 332 KAFAKLSKRAVPAKGLTFSCICLLGGVVLLYVNPSVIGAFTLVTTVSAILFMFVWTIILCSYLVYRkqrpHLHEKSIYKM 411
                        410       420       430       440       450       460
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 556485530 397 PFRSILfpyaNYLTMAFLICVLIGMYFNEDTRMSLFVGMIFLAAVTAAYKLFGLGRRATTQK 458
Cdd:PRK11049 412 PLGKLM----CWVCMAFFAFVLVLLTLEDDTRQALIVTPLWFIALGLGYLFIGKKRAAELRK 469
PRK10238 PRK10238
aromatic amino acid transporter AroP;
7-445 1.50e-110

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 334.23  E-value: 1.50e-110
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   7 ELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSP 86
Cdd:PRK10238   9 QLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGS 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  87 FFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTIIVMIV 166
Cdd:PRK10238  89 FAGFASGWNYWVLYVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIKVIAVVAMII 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 167 VGLGVIFfgFGNGGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILI 246
Cdd:PRK10238 169 FGGWLLF--SGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQVIYRILI 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 247 FYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLPAAMSKV 326
Cdd:PRK10238 247 FYIGSLAVLLSLMPWTRVTADTSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASV 326
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 327 SRAGVPVAGVAVSIAILLIGSCLNYIIpnPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKAIESHPFRSILFPYA 406
Cdd:PRK10238 327 DKRGVPVNTILVSALVTALCVLINYLA--PESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQGVVTRFPALLYPLG 404
                        410       420       430
                 ....*....|....*....|....*....|....*....
gi 556485530 407 NYLTMAFLICVLIGMYFNEDTRMSLFVGMIFLAAVTAAY 445
Cdd:PRK10238 405 NWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGY 443
GABAperm TIGR01773
gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of ...
7-448 2.47e-98

gamma-aminobutyrate permease; GABA permease (gabP) catalyzes the translocation of 4-aminobutyrate (GABA) across the plasma membrane, with homologues expressed in Gram-negative and Gram-positive organisms. This permease is a highly hydrophobic transmembrane protein consisting of 12 transmembrane domains with hydrophilic N- and C-terminal ends. Induced by nitrogen-limited culture conditions in both Escherichia coli and Bacillus subtilis, gabP is an energy dependent transport system stimulated by membrane potential and has been observed adjacent and distant from other GABA degradation proteins. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity. [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273797  Cd Length: 452  Bit Score: 302.56  E-value: 2.47e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530    7 ELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSP 86
Cdd:TIGR01773   9 KLPNGLKTRHVTMLSIAGVIGAGLFVGSGSAIASAGPAALLAYLLAGLLVVFIMRMLGEMAVANPDTGSFSTYADDAIGR 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   87 FFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTIIVMIV 166
Cdd:TIGR01773  89 WAGFTIGWLYWWFWVLVIPLEAIAAAGILQYWFPDIPLWLFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFII 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  167 VGLGVIfFGFGNGGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILI 246
Cdd:TIGR01773 169 LGAVAI-FGFAPGSEVSGFSNLTGKGGFFPNGIGAVLLAILVTMFSFMGTEIVTIAAAESSNPIKSITRATNSVIWRIIV 247
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  247 FYVGAIFVIVTIFPWNEIGTTGS-PFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLPAAMSK 325
Cdd:TIGR01773 248 FYLGSIFIVVALLPWNSPNLLEVgSYVAVLELLGIPHAKLIMDFVVLTAVLSCLNSALYTTSRMLYSLAERGDAPRVFMK 327
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  326 VSRAGVPVAGVAVSIAILLIGSCLNYIipNPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKAIESHPFRSILFPY 405
Cdd:TIGR01773 328 LNKKGVPVQAVLASTFFSFLTVVVNYF--APDKVFLFLVNSSGAIALLVYLVIAVSQLRMRKKLKANGEAIKIRMWLYPW 405
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|...
gi 556485530  406 ANYLTMAFLICVLIGMYFNEDTRMSLFVGMIFLAAVTAAYKLF 448
Cdd:TIGR01773 406 LTWLVIIFICGILVSMLFIPSMRDEVLLTGLLTIIVLCSYLVF 448
PRK10836 PRK10836
lysine transporter; Provisional
4-419 5.39e-94

lysine transporter; Provisional


Pssm-ID: 182767  Cd Length: 489  Bit Score: 292.49  E-value: 5.39e-94
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   4 KQPELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPS-VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHR 82
Cdd:PRK10836   9 EAPGLRRELKARHLTMIAIGGSIGTGLFVASGATISQAGPGgALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQN 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  83 YMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTII 162
Cdd:PRK10836  89 YVEEGFGFALGWNYWYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFSLIKVTTVI 168
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 163 VMIVVGLGVIfFGFGNGGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLW 242
Cdd:PRK10836 169 VFIIVGVLMI-IGIFKGAEPAGWSNWTIGDAPFAGGFAAMIGVAMIVGFSFQGTELIGIAAGESEDPAKNIPRAVRQVFW 247
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 243 RILIFYVGAIFVIVTIFPW-------NEIG-TTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALS 314
Cdd:PRK10836 248 RILLFYVFAILIISLIIPYtdpsllrNDVKdISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLA 327
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 315 KNNQLPAAMSKVSRAGVPVAgvAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRH---AHKK 391
Cdd:PRK10836 328 CDGKAPRIFAKLSRGGVPRN--ALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRgyvLQGH 405
                        410       420
                 ....*....|....*....|....*...
gi 556485530 392 AIESHPFRSILFPYANYLtmAFLICVLI 419
Cdd:PRK10836 406 DLNDLPYRSGFFPLGPIF--AFVLCLII 431
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
9-449 1.02e-89

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 281.09  E-value: 1.02e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530    9 QRGLEARHIELIALGGTIGVGLFMGSASTLKWAGP-SVLLAYIIAGLFVFFIMRSMGEM-LFLEPVTGSFAVYAHRYMSP 86
Cdd:TIGR00913   1 KKSLKQRHIQMIALGGTIGTGLLVGSGTALATGGPaGLLIGYAIMGSIIYCVMQSLGEMaTFYPVVSGSFATYASRFVDP 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   87 FFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTIIVMIV 166
Cdd:TIGR00913  81 AFGFAVGWNYWLQWLIVLPLELVTASMTIQYWTDKVNPAVWIAIFYVFIVIINLFGVKGYGEAEFWFSSIKILAIIGFII 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  167 VGLgVIFFGFGNGGHAIGFGNLTENGGF----FAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLW 242
Cdd:TIGR00913 161 LSI-ILNCGGGPNHGYIGFRYWHDPGAFaggtIGGRFKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFW 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  243 RILIFYVGAIFVIVTIFPWNE---------IGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYAL 313
Cdd:TIGR00913 240 RILVFYILTLFLIGFLVPYNDprllsssssSDSAASPFVIAIQNHGIKVLPHIFNAVILISVLSAANSSLYASSRTLYAL 319
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  314 SKNNQLPAAMSKVSRAGVPVAGVAVSIAILLIGSCLnyIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHK--- 390
Cdd:TIGR00913 320 AHQGLAPKIFAYVDRRGVPYVAVIVSSLFGLLAFLA--VSKKEAEVFTWLLNISGLSGFFTWMCICLSHIRFRKAMKaqg 397
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 556485530  391 KAIESHPFRSILFPYANYLTMAFLICVLIGM--------YFNEDTRMSLFVGMIFLAAVTAAYKLFG 449
Cdd:TIGR00913 398 RSLDELPYKSQTGPYGSYYALFFNILILIAQgyvafapvKFSAKSFFEAYLSLPIFIALYIGHKVYK 464
PRK15049 PRK15049
L-asparagine permease;
9-424 7.45e-89

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 279.58  E-value: 7.45e-89
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   9 QRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFF 88
Cdd:PRK15049  27 HKAMGNRQVQMIAIGGAIGTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKA 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  89 GYLTAWSYWFMWMAVGISEITAIGVYVQFW--FPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTIIVMIV 166
Cdd:PRK15049 107 AYVAGWMYFINWAMTGIVDITAVALYMHYWgaFGGVPQWVFALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLV 186
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 167 VGlgVIFFGFGN--GGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRI 244
Cdd:PRK15049 187 VG--TVFLGSGQplDGNTTGFHLITDNGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRI 264
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 245 LIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLPAAMS 324
Cdd:PRK15049 265 GLFYVGSVVLLVMLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSFMA 344
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 325 KVSRAGVPVAGVAVSIAILLIGSCLNYIIPNpqRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKAIESH-PFRSILF 403
Cdd:PRK15049 345 KMSRQHVPYAGILATLVVYVVGVFLNYLVPS--RVFEIVLNFASLGIIASWAFIIVCQMRLRKAIKEGKAADvSFKLPGA 422
                        410       420
                 ....*....|....*....|.
gi 556485530 404 PYANYLTMAFLICVLIGMYFN 424
Cdd:PRK15049 423 PFTSWLTLLFLLSVLVLMAFD 443
AA_permease pfam00324
Amino acid permease;
16-423 1.28e-87

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 275.35  E-value: 1.28e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   16 HIELIALGGTIGVGLFMGSASTLKWAGP-SVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAW 94
Cdd:pfam00324   1 HVQMIALGGVIGTGLFVGSGSVLGQAGPaGALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGW 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   95 SYWFMWMAVGISEITAIGVYVQFW--FPDM-VQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTIIVMIVVglGV 171
Cdd:pfam00324  81 NYWLSWITVLALELTAASILIQFWelVPDIpYLWVWGAVFLVLLTIINLVGVKWYGEAEFWFALIKIIAIIGFIIV--GI 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  172 IFFGFGNGGHAIGFGNLTENGG---FFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILIFY 248
Cdd:pfam00324 159 ILLSGGNPNDGAIFRYLGDNGGknnFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWRITIFY 238
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  249 VGAIFVIVTIFPWNEIG------TTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLPAA 322
Cdd:pfam00324 239 ILSLLAIGLLVPWNDPGllndsaSAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDGLAPKF 318
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  323 MSKVSRAGVPVAGVAVSIAILLIGSCLNYIipNPQRVFVYVYSASVLPGMVPWFVILISQLRFR---HAHKKAIESHPFR 399
Cdd:pfam00324 319 LKKVDKRGVPLRAILVSMVISLLALLLASL--NPAIVFNFLLAISGLSGLIVWGLISLSHLRFRkafKYQGRSIDELPFK 396
                         410       420
                  ....*....|....*....|....
gi 556485530  400 SILFPYANYLTMAFLICVLIGMYF 423
Cdd:pfam00324 397 APLGPLGVILGLAAIIIILIIQFL 420
PRK11387 PRK11387
S-methylmethionine permease;
3-447 4.79e-87

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 274.04  E-value: 4.79e-87
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   3 EKQPELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPS-VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAH 81
Cdd:PRK11387   7 QQAGQFKRTMKVRHLVMLSLGGVIGTGLFFNTGYIISTTGAAgTLLAYLIGALVVYLVMQCLGELSVAMPETGAFHVYAA 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  82 RYMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTI 161
Cdd:PRK11387  87 RYLGPATGYTVAWLYWLTWTVALGSSLTAAGFCMQYWFPQVPVWPWCLLFCALIFGLNVVSTRFFAEGEFWFSLIKVVTI 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 162 IVMIVVGlGVIFFGF---GNGGHAIGFGNLTENGGFFAGGWKGFLTALCIVVAsYQGVELIGITAGEAKNPQVTLRSAVG 238
Cdd:PRK11387 167 LAFIVLG-GAAIFGFipmQDGSPAPGLRNLTAEGWFPHGGLPILMTMVAVNFA-FSGTELIGIAAGETENPAKVIPVAIR 244
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 239 KVLWRILIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQ 318
Cdd:PRK11387 245 TTIARLVIFFVGTVLVLAALIPMQQAGVEKSPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNEGT 324
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 319 LPAAMSKVSRAGVPVAGVAVSiailLIGSCLNYI--IPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAH---KKAI 393
Cdd:PRK11387 325 LPACFARLTKRGIPLTALSVS----MLGGLLALFssVVAPDTVFVALSAISGFAVVAVWLSICASHFMFRRRHlrdGKAL 400
                        410       420       430       440       450
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 556485530 394 ESHPFRSILFPYANYLtmAFLICVL--IGMYFNEDTRMSLFVGMIFLAAVTAAYKL 447
Cdd:PRK11387 401 SELAYRAPWYPLTPIL--GFVLCLLacVGLAFDPSQRIALWCGIPFVALCYGAYYL 454
PRK10197 PRK10197
GABA permease;
19-423 1.82e-63

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 211.79  E-value: 1.82e-63
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  19 LIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWF 98
Cdd:PRK10197   1 MLSIAGVIGASLFVGSSVAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWW 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  99 MWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTIIVMIVVGlGVIFFGFGN 178
Cdd:PRK10197  81 FWVLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLG-AVAISGFYP 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 179 GGHAIGFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTI 258
Cdd:PRK10197 160 YAEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVAL 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 259 FPWNEIGTTG-SPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLPAAMSKVSRAGVPVAGVA 337
Cdd:PRK10197 240 IPWNMPGLKAvGSYRSVLELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTPYVAVL 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 338 VSIAILLIGSCLNYIIpnPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKAIESHPFRSILFPYANYLTMAFLICV 417
Cdd:PRK10197 320 LSTGAAFLTVVVNYYA--PAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAEGSEIRLRMWLYPWLTWLVIGFITFV 397

                 ....*.
gi 556485530 418 LIGMYF 423
Cdd:PRK10197 398 LVVMLF 403
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
3-445 9.75e-43

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 156.60  E-value: 9.75e-43
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   3 EKQPELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHR 82
Cdd:COG0531    4 GESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGLAGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYARR 83
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  83 YMSPFFGYLTAWSYWFMWMAVGISEITAIGVYVQFWFPDMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTII 162
Cdd:COG0531   84 ALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVLILLLTLLNLRGVKESAKVNNILTVLKLLVLL 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 163 VMIVVGLgviffGFGNGGHAIGFGNltenggfFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLW 242
Cdd:COG0531  164 LFIVVGL-----FAFDPANFTPFLP-------AGGGLSGVLAALALAFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLL 231
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 243 RILIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLPAA 322
Cdd:COG0531  232 IVGVLYILVSLALTGVVPYDELAASGAPLADAAEAVFGPWGAILIALGALLSLLGALNASILGASRLLYAMARDGLLPKV 311
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 323 MSKVS-RAGVPVAGVAVSIAILLIGSCLnyiipnPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHKKAieSHPFRSI 401
Cdd:COG0531  312 FAKVHpRFGTPVNAILLTGVIALLLLLL------GAASFTALASLASVGVLLAYLLVALAVIVLRRRRPDL--PRPFRVP 383
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....
gi 556485530 402 LfpyaNYLTMAFLICVLIGMYFNEDTRMSLFVGMIFLAAVTAAY 445
Cdd:COG0531  384 L----PLIPILGILLCLFLLYLLGPGALLIGLVLLAIGLLLYLL 423
AA_permease_2 pfam13520
Amino acid permease;
20-441 1.40e-23

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 102.39  E-value: 1.40e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   20 IALGGTIGVGLFMGSASTLkwAGPSVLLAYIIAGLFVFFIMR-SMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWF 98
Cdd:pfam13520   9 LVIGSVIGSGIFVAPLVAS--GGPALIVWGWIAAIIFSLAVGlVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWF 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   99 MWMAVG-ISEITAIGVYVQFWFPDMVQWIP-----ALIAVGLVALANLAAVRLYGEIEFWFAMIKV-TTIIVMIVVGLGV 171
Cdd:pfam13520  87 AYVLGLaSSASVAASYLLSALGPDLVPTTWltygiAIAILIIFAIINIRGVRESAKIQNILGILKLlLPLILIIILGLVT 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  172 IFFGFGNGGHaigfgnlTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPqvTLRSAVGKVLWRILIFYVGA 251
Cdd:pfam13520 167 ADGGGFNLLS-------GEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEVKKR--NVPKAIFIGVIIVGVLYILV 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  252 IFVIVTIFPWNEI---GTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLPAA--MSKV 326
Cdd:pfam13520 238 NIAFFGVVPDDEIalsSGLGQVAALLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLPFSrfFAKV 317
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  327 SRAGVPVAGVAVSIAILLIGSCLNYIIPnpqRVFVYVYSASVLPGMVPWFVILISqlRFRHAHKKAIESHPFRSILFPYA 406
Cdd:pfam13520 318 NKFGSPIRAIILTAILSLILLLLFLLSP---AAYNALLSLSAYGYLLSYLLPIIG--LLILRKKRPDLGRIPGRWPVAIF 392
                         410       420       430
                  ....*....|....*....|....*....|....*
gi 556485530  407 NYLTMAFLICVLIGMYFNEDTRMSLFVGMIFLAAV 441
Cdd:pfam13520 393 GILFSLFLIVALFFPPVGPATGSSLNYAIILIVAF 427
frlA PRK11357
amino acid permease;
7-326 1.06e-14

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 75.66  E-value: 1.06e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   7 ELQRGLEARHIELIALGGTIGVGLFMGSASTLKWAGPSVL--LAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYM 84
Cdd:PRK11357   5 ELQRKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLtvLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAG 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  85 SPFFGYLTAWSYWFMWMAVGISEIT-AIGVYVQFWFPdMVQWIPALIAVGLVALANLAAVRLYGEIEFWFAMIKVTTII- 162
Cdd:PRK11357  85 SRPLAFLSGWASFWANDAPSLSIMAlAIVSNLGFLTP-IDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIp 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 163 VMIVVGLGVIFFGFGNgghaigFGNLTENGGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLW 242
Cdd:PRK11357 164 FTIVIGLGIFWFKAEN------FAAPTTTAIGATGSFMALLAGISATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCL 237
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 243 RILIFYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKI-GITAAAGII----NFVVLTAALSGCNsgMYScGRMLYALSKNN 317
Cdd:PRK11357 238 LVLVLYTLLALVISGLMPFDKLANSETPISDALTWIpALGSTAGIFvaitAMIVILGSLSSCV--MYQ-PRLEYAMAKDN 314

                 ....*....
gi 556485530 318 QLPAAMSKV 326
Cdd:PRK11357 315 LFFKCFGHV 323
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
7-342 5.35e-14

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 74.08  E-value: 5.35e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530    7 ELQRGLEARHIELIALGGTIGVGLFMGSASTLK-WAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMS 85
Cdd:TIGR00906  25 KMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARnDSGPAIVLSFLISGLAAVLSGFCYAEFGARVPKAGSAYLYSYVTVG 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530   86 PFFGYLTAWSYWFMWMaVGISEI---------TAIGVYVQFWFPDMVQ-------WIPALIAVGLVAL-ANLAAVRLYGE 148
Cdd:TIGR00906 105 ELWAFITGWNLILEYV-IGTAAVarswsayfdELLNKQIGQFRRTYFKlnydglaEYPDFFAVCLILLlAVLLSFGVKES 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  149 iefwfAMIKVTTIIVMIVVGLGVIFFGFGNGGhaIGFGNLTEN---GGFFAGGWKGFLTALCIVVASYQGVELIGITAGE 225
Cdd:TIGR00906 184 -----AWVNKIFTAINILVLLFVIIAGFTKAD--VANWSITEEkgaGGFMPYGFTGVLSGAATCFFAFIGFDAIATTGEE 256
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  226 AKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNEIGTTgSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYS 305
Cdd:TIGR00906 257 VKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPD-APFPVAFEYVGWDPAKYIVAVGALCGMSTSLLGGMFP 335
                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 556485530  306 CGRMLYALSKNNQLPAAMSKV-SRAGVPVAGVAVSIAI 342
Cdd:TIGR00906 336 LPRVIYAMARDGLLFKWLAQInSKTKTPINATVVSGAI 373
PRK10644 PRK10644
arginine/agmatine antiporter;
19-448 5.95e-14

arginine/agmatine antiporter;


Pssm-ID: 182613 [Multi-domain]  Cd Length: 445  Bit Score: 73.67  E-value: 5.95e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  19 LIALGGTIGVGLFMGSASTLKWAGPSVL--LAYIIAGLFVFFIMRSMGemlFLEPVTGSFAVYAHRYMSPFFGYLTAWSY 96
Cdd:PRK10644  17 LMVAGNIMGSGVFLLPANLASTGGIAIYgwLVTIIGALGLSMVYAKMS---SLDPSPGGSYAYARRCFGPFLGYQTNVLY 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  97 WFM-WmaVGISEITAIGV-YVQFWFP----DMVQWIPALIAVGLVALANLAAVRLYGEIEfwfamiKVTTIIVMI-VVGL 169
Cdd:PRK10644  94 WLAcW--IGNIAMVVIGVgYLSYFFPilkdPLVLTITCVVVLWIFVLLNIVGPKMITRVQ------AVATVLALIpIVGI 165
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 170 GVIFFGFGNGGHAIGFGNLTENGGFFAGGwkgflTALCIVVASYQGVELIGITAGEAKNPQVTL-RSAVGKVLWRIlIFY 248
Cdd:PRK10644 166 AVFGWFWFRGETYMAAWNVSGLGTFGAIQ-----STLNVTLWSFIGVESASVAAGVVKNPKRNVpIATIGGVLIAA-VCY 239
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 249 VGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALSKNNQLPAAMSKVSR 328
Cdd:PRK10644 240 VLSSTAIMGMIPNAALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNK 319
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 329 AGVPVAGVAVsIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRHAHkkaiesHPFRSILFPYANY 408
Cdd:PRK10644 320 AGTPVAGLLI-VGVLMTIFQLSSISPNASKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGH------FGKARPAYLAVTL 392
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|
gi 556485530 409 LTMAFLICVLIGMYfNEDTRMSLfvgmIFLAAVTAAYKLF 448
Cdd:PRK10644 393 IAFVYCIWAVVGSG-AKEVMWSF----VTLMVITAFYALN 427
cadB PRK10435
cadaverine/lysine antiporter;
71-423 2.32e-07

cadaverine/lysine antiporter;


Pssm-ID: 182458  Cd Length: 435  Bit Score: 52.83  E-value: 2.32e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  71 PVTGSFAVYAHRyMSPFFGYLTAWSY----WFMWMAVGISEITaigvYVQFWFPDMVQWIPAliavglvALANLAAVRLY 146
Cdd:PRK10435  65 PQQGGPIAYAGE-ISPAFGFQTGVLYyhanWIGNLAIGITAVS----YLSTFFPVLNDPIPA-------GIACIAIVWVF 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 147 GEIEF----WFAMIKVTTIIVMIVVGLGVIFFGFGNGGHAIGFGNLTENGGffaGGWKGFLTALCIVVASYQGVELIGIT 222
Cdd:PRK10435 133 TFVNMlggtWVSRLTTIGLVLVLIPVVGTAIVGWHWFDAATYAANWNTSDT---TDGHAIIKSILLCLWAFVGVESAAVS 209
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 223 AGEAKNPQ--VTLRSAVGKVLWRILifYVGAIFVIVTIFPWNEIGTTGSPFVLTFAKIGITAAAGIINFVVLTAALSGCN 300
Cdd:PRK10435 210 TGMVKNPKrtVPLATMLGTGLAGII--YIAATQVISGMFPASVMAASGAPFAISASTILGNWAAPLVSAFTAFACLTSLG 287
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 301 SGMYSCGRMLYALSKNNQLPAAMSKVSRAGVPVAGV---AVSIAILLIG-SCLNYIIPNPQRVFVYVYSASVLPGMVPWF 376
Cdd:PRK10435 288 SWMMLVGQAGVRAANDGNFPKVYGEVDKNGIPKKGLllaAVKMTALMILiTLMNSSGGKASDLFGELTGIAVLLTMLPYF 367
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 556485530 377 VILISQLRFRHAHKKAIESHPFRSI--LFPYANY-------LTMAFLICVLIGMYF 423
Cdd:PRK10435 368 YSCVDLIRFEGVNIRNFVSLICSVLgcVFCFIALmgassfeLAGTFIVSLIILMFY 423
PRK11021 PRK11021
putative transporter; Provisional
27-371 2.49e-03

putative transporter; Provisional


Pssm-ID: 236823 [Multi-domain]  Cd Length: 410  Bit Score: 39.89  E-value: 2.49e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530  27 GVGLFMGSASTLKWAGPSVLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMwmaVGIS 106
Cdd:PRK11021  16 GTGVFAVPALAALVAGNNSLWAWPLLILLIFPIAIVFARLGRHFPHAGGPAHFVGMAFGPRLGRVTGWLFLSV---IPVG 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 107 EITAIGVYVQFW-----FPDMVQWIPALIAVGLVALANLAAVRLYGeiefwfamiKVTTIIVMIVVGLGVIFFGFGNGGH 181
Cdd:PRK11021  93 LPAALQIAAGFGqalfgWSSWQLLLAELLTLALLWLLNLRGASSSA---------NLQTVIALLIVALVVAIWWAGDIKP 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 182 A-IGFGNLTEnggffaGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSA--VGKVLwrilifyVGAIF----V 254
Cdd:PRK11021 164 AdIPFPAPGS------IEWSGLFAALGVMFWCFVGIEAFAHLASEFKNPERDFPRAlmIGLLL-------AGLVYwactV 230
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556485530 255 IVTIFP-WNEIGTTGSPFVLTFAK-IGITAA--AGIINFVvltAALSGCNSGMYSCGRMLYALSKNNQLPAAMSKVSRAG 330
Cdd:PRK11021 231 VVLHFPaYGDKQAAAASLPGIFVQlFGGYALwvICVIGYL---ACFASVNIYTQSFARLVWSQAREGRPPSYLARLSARG 307
                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 556485530 331 VPVAGVAVSIAILLIGSCLNYIIPNP--------QRVFVYVYSASVLPG 371
Cdd:PRK11021 308 VPVNALNAVLGCCAVSILLIYALGLNlealiayaNGIFVLIYLLCMLAA 356
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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