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Conserved domains on  [gi|564862204|ref|WP_023869463|]
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MULTISPECIES: DoxX family protein [Mycobacterium avium complex (MAC)]

Protein Classification

DoxX family protein( domain architecture ID 10611814)

DoxX family protein, an inner membrane protein, similar to Bacillus subtilis uncharacterized membrane protein YdgD

Gene Ontology:  GO:0005886
PubMed:  26067605

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DoxX_2 pfam13564
DoxX-like family; This family of uncharacterized proteins are related to DoxX pfam07681.
 11-99 4.97e-06

DoxX-like family; This family of uncharacterized proteins are related to DoxX pfam07681.


:

Pssm-ID: 433313  Cd Length: 103  Bit Score: 41.79  E-value: 4.97e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564862204   11 AALGVFHAVDAVACGVQVAPIRKTLDNLGVPDNIRPVLPVVKAAAAVGLLS-VTRFPGLARLTTAMLTLYFVLAVGAHVR 89
Cdd:pfam13564   4 GLLAAFFLASGVAKLARPPEVVAGMAWLGFPLGFVRILGVLELAGALGLLLpLVGAPRLTPLAAAGLALLMIGAIATHLR 83

                          90
                  ....*....|
gi 564862204   90 VRDKVVNGLP 99
Cdd:pfam13564  84 RGDPPHVAFP 93
 
Name Accession Description Interval E-value
DoxX_2 pfam13564
DoxX-like family; This family of uncharacterized proteins are related to DoxX pfam07681.
 11-99 4.97e-06

DoxX-like family; This family of uncharacterized proteins are related to DoxX pfam07681.


Pssm-ID: 433313  Cd Length: 103  Bit Score: 41.79  E-value: 4.97e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564862204   11 AALGVFHAVDAVACGVQVAPIRKTLDNLGVPDNIRPVLPVVKAAAAVGLLS-VTRFPGLARLTTAMLTLYFVLAVGAHVR 89
Cdd:pfam13564   4 GLLAAFFLASGVAKLARPPEVVAGMAWLGFPLGFVRILGVLELAGALGLLLpLVGAPRLTPLAAAGLALLMIGAIATHLR 83

                          90
                  ....*....|
gi 564862204   90 VRDKVVNGLP 99
Cdd:pfam13564  84 RGDPPHVAFP 93
 
Name Accession Description Interval E-value
DoxX_2 pfam13564
DoxX-like family; This family of uncharacterized proteins are related to DoxX pfam07681.
 11-99 4.97e-06

DoxX-like family; This family of uncharacterized proteins are related to DoxX pfam07681.


Pssm-ID: 433313  Cd Length: 103  Bit Score: 41.79  E-value: 4.97e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564862204   11 AALGVFHAVDAVACGVQVAPIRKTLDNLGVPDNIRPVLPVVKAAAAVGLLS-VTRFPGLARLTTAMLTLYFVLAVGAHVR 89
Cdd:pfam13564   4 GLLAAFFLASGVAKLARPPEVVAGMAWLGFPLGFVRILGVLELAGALGLLLpLVGAPRLTPLAAAGLALLMIGAIATHLR 83

                          90
                  ....*....|
gi 564862204   90 VRDKVVNGLP 99
Cdd:pfam13564  84 RGDPPHVAFP 93
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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