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Conserved domains on  [gi|565850514|ref|WP_023933193|]
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DUF2956 domain-containing protein [Photobacterium leiognathi]

Protein Classification

DUF2956 domain-containing protein( domain architecture ID 10567703)

DUF2956 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2956 pfam11169
Protein of unknown function (DUF2956); This family of proteins with unknown function appears ...
 10-109 7.75e-43

Protein of unknown function (DUF2956); This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.


:

Pssm-ID: 431698  Cd Length: 101  Bit Score: 135.53  E-value: 7.75e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 565850514   10 SPETQAEAMRIAKGTQKEGQTKEQTRLIALGIQKGIEQYKKQQKAKAREHDKLKKKIARTKASNDADNAPEVVTETI-YQ 88
Cdd:pfam11169   1 SPETQQEALKIAKATQKPGQTKEQTKLIAQGIEKGIAEYKKQQKEKAREADKARKKQQAQQKEQTDDEADTSEEESQvNR 80

                          90       100
                  ....*....|....*....|.
gi 565850514   89 QSKLAWGLLVASWIGFIAYLL 109
Cdd:pfam11169  81 QHWLPWGLLVLSWLGFAAYLF 101
 
Name Accession Description Interval E-value
DUF2956 pfam11169
Protein of unknown function (DUF2956); This family of proteins with unknown function appears ...
 10-109 7.75e-43

Protein of unknown function (DUF2956); This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.


Pssm-ID: 431698  Cd Length: 101  Bit Score: 135.53  E-value: 7.75e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 565850514   10 SPETQAEAMRIAKGTQKEGQTKEQTRLIALGIQKGIEQYKKQQKAKAREHDKLKKKIARTKASNDADNAPEVVTETI-YQ 88
Cdd:pfam11169   1 SPETQQEALKIAKATQKPGQTKEQTKLIAQGIEKGIAEYKKQQKEKAREADKARKKQQAQQKEQTDDEADTSEEESQvNR 80

                          90       100
                  ....*....|....*....|.
gi 565850514   89 QSKLAWGLLVASWIGFIAYLL 109
Cdd:pfam11169  81 QHWLPWGLLVLSWLGFAAYLF 101
 
Name Accession Description Interval E-value
DUF2956 pfam11169
Protein of unknown function (DUF2956); This family of proteins with unknown function appears ...
 10-109 7.75e-43

Protein of unknown function (DUF2956); This family of proteins with unknown function appears to be restricted to Gammaproteobacteria.


Pssm-ID: 431698  Cd Length: 101  Bit Score: 135.53  E-value: 7.75e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 565850514   10 SPETQAEAMRIAKGTQKEGQTKEQTRLIALGIQKGIEQYKKQQKAKAREHDKLKKKIARTKASNDADNAPEVVTETI-YQ 88
Cdd:pfam11169   1 SPETQQEALKIAKATQKPGQTKEQTKLIAQGIEKGIAEYKKQQKEKAREADKARKKQQAQQKEQTDDEADTSEEESQvNR 80

                          90       100
                  ....*....|....*....|.
gi 565850514   89 QSKLAWGLLVASWIGFIAYLL 109
Cdd:pfam11169  81 QHWLPWGLLVLSWLGFAAYLF 101
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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