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Conserved domains on  [gi|567929591|ref|WP_024031991|]
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MULTISPECIES: DUF4124 domain-containing protein [Pseudoalteromonas]

Protein Classification

DUF4124 domain-containing protein( domain architecture ID 10607508)

DUF4124 domain-containing protein may have an Ig-like fold

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4124 pfam13511
Domain of unknown function (DUF4124); This presumed domain is found in a variety of bacterial ...
 83-124 9.61e-07

Domain of unknown function (DUF4124); This presumed domain is found in a variety of bacterial proteins. It is found associated at the N-terminus associated with other domains such as the SLT domain and glutaredoxin domains in some proteins. The function of this domain is unknown, but it may have an Ig-like fold.


:

Pssm-ID: 433269  Cd Length: 53  Bit Score: 43.76  E-value: 9.61e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 567929591   83 GSKIYKWQDKNGQWHFSDTPNADGKSIEVKLDARDVTVVAAE 124
Cdd:pfam13511  11 AAEVYKWVDANGVVHYSDQPPPAGQKAEQVETAPPPAAAAPA 52
 
Name Accession Description Interval E-value
DUF4124 pfam13511
Domain of unknown function (DUF4124); This presumed domain is found in a variety of bacterial ...
 83-124 9.61e-07

Domain of unknown function (DUF4124); This presumed domain is found in a variety of bacterial proteins. It is found associated at the N-terminus associated with other domains such as the SLT domain and glutaredoxin domains in some proteins. The function of this domain is unknown, but it may have an Ig-like fold.


Pssm-ID: 433269  Cd Length: 53  Bit Score: 43.76  E-value: 9.61e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 567929591   83 GSKIYKWQDKNGQWHFSDTPNADGKSIEVKLDARDVTVVAAE 124
Cdd:pfam13511  11 AAEVYKWVDANGVVHYSDQPPPAGQKAEQVETAPPPAAAAPA 52
 
Name Accession Description Interval E-value
DUF4124 pfam13511
Domain of unknown function (DUF4124); This presumed domain is found in a variety of bacterial ...
 83-124 9.61e-07

Domain of unknown function (DUF4124); This presumed domain is found in a variety of bacterial proteins. It is found associated at the N-terminus associated with other domains such as the SLT domain and glutaredoxin domains in some proteins. The function of this domain is unknown, but it may have an Ig-like fold.


Pssm-ID: 433269  Cd Length: 53  Bit Score: 43.76  E-value: 9.61e-07
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|..
gi 567929591   83 GSKIYKWQDKNGQWHFSDTPNADGKSIEVKLDARDVTVVAAE 124
Cdd:pfam13511  11 AAEVYKWVDANGVVHYSDQPPPAGQKAEQVETAPPPAAAAPA 52
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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