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Conserved domains on  [gi|639237400|ref|WP_024568077|]
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DoxX family protein [Elizabethkingia anophelis]

Protein Classification

DoxX family protein( domain architecture ID 10006227)

DoxX family protein, an inner membrane protein, similar to Bacillus subtilis putative oxidoreductases MhqP and CatD, and Escherichia coli inner membrane proteins YphA and YqjF

Gene Ontology:  GO:0005886
PubMed:  15306018|26067605

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DoxX COG2259
Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown];
6-92 2.46e-05

Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown];


:

Pssm-ID: 441860  Cd Length: 134  Bit Score: 41.74  E-value: 2.46e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639237400   6 LNKAGNVFYVICRISIGLFFFITGLNKLFHPvfqGYMLNTMIKIGFSDPQLMAHFVAFNEALWGLLLLLGLLTRLSSFSL 85
Cdd:COG2259    3 LSTLADLGLLLLRLLLGLLFLAHGLQKLFGF---DGTAGFFASLGLPLPALLAYLAGLAELVGGLLLILGLFTRLAALLL 79


                 ....*..
gi 639237400  86 IIIMVVA 92
Cdd:COG2259   80 AGFMLVA 86
 
Name Accession Description Interval E-value
DoxX COG2259
Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown];
6-92 2.46e-05

Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown];


Pssm-ID: 441860  Cd Length: 134  Bit Score: 41.74  E-value: 2.46e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639237400   6 LNKAGNVFYVICRISIGLFFFITGLNKLFHPvfqGYMLNTMIKIGFSDPQLMAHFVAFNEALWGLLLLLGLLTRLSSFSL 85
Cdd:COG2259    3 LSTLADLGLLLLRLLLGLLFLAHGLQKLFGF---DGTAGFFASLGLPLPALLAYLAGLAELVGGLLLILGLFTRLAALLL 79


                 ....*..
gi 639237400  86 IIIMVVA 92
Cdd:COG2259   80 AGFMLVA 86
DoxX pfam07681
DoxX; These proteins appear to have some sequence similarity with pfam04173 but their function ...
 16-92 2.95e-05

DoxX; These proteins appear to have some sequence similarity with pfam04173 but their function is unknown.


Pssm-ID: 429591  Cd Length: 84  Bit Score: 40.63  E-value: 2.95e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 639237400   16 ICRISIGLFFFITGLNKLFHPvFQGYMlNTMIKIGFSDPQLMAHFVAFNEALWGLLLLLGLLTRLSSFSLIIIMVVA 92
Cdd:pfam07681   4 LLRLALGVLFIAHGLQKLFGG-FAGTA-GYFASLGLPPPALLAYLAILAELVGGLLLLLGLLTRLAALLLAVFMLVA 78
 
Name Accession Description Interval E-value
DoxX COG2259
Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown];
6-92 2.46e-05

Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown];


Pssm-ID: 441860  Cd Length: 134  Bit Score: 41.74  E-value: 2.46e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639237400   6 LNKAGNVFYVICRISIGLFFFITGLNKLFHPvfqGYMLNTMIKIGFSDPQLMAHFVAFNEALWGLLLLLGLLTRLSSFSL 85
Cdd:COG2259    3 LSTLADLGLLLLRLLLGLLFLAHGLQKLFGF---DGTAGFFASLGLPLPALLAYLAGLAELVGGLLLILGLFTRLAALLL 79


                 ....*..
gi 639237400  86 IIIMVVA 92
Cdd:COG2259   80 AGFMLVA 86
DoxX pfam07681
DoxX; These proteins appear to have some sequence similarity with pfam04173 but their function ...
 16-92 2.95e-05

DoxX; These proteins appear to have some sequence similarity with pfam04173 but their function is unknown.


Pssm-ID: 429591  Cd Length: 84  Bit Score: 40.63  E-value: 2.95e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 639237400   16 ICRISIGLFFFITGLNKLFHPvFQGYMlNTMIKIGFSDPQLMAHFVAFNEALWGLLLLLGLLTRLSSFSLIIIMVVA 92
Cdd:pfam07681   4 LLRLALGVLFIAHGLQKLFGG-FAGTA-GYFASLGLPPPALLAYLAILAELVGGLLLLLGLLTRLAALLLAVFMLVA 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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