|
Name |
Accession |
Description |
Interval |
E-value |
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
8-319 |
2.62e-99 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 295.11 E-value: 2.62e-99
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 8 YDVTIIGGGPIGLFTAFYCGMRELKTKVIEFlPKLGGKVSLFfpeKIIRDIGGIP-GIAGKQLIEQLKEQAATFDPDIVM 86
Cdd:COG0492 1 YDVVIIGAGPAGLTAAIYAARAGLKTLVIEG-GEPGGQLATT---KEIENYPGFPeGISGPELAERLREQAERFGAEILL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 87 nQRVTGFERlDDGIIVLTGSEGEKHYTRTVILACGMG--TLEVnefdsEDAARYAGKNLHYGVeKLDA--FKGKHVVISG 162
Cdd:COG0492 77 -EEVTSVDK-DDGPFRVTTDDGTEYEAKAVIIATGAGprKLGL-----PGEEEFEGRGVSYCA-TCDGffFRGKDVVVVG 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 163 GGDTAVDWANELEPIAASVTVVHRRQEFGGMESSVTKMKQSS-VRVLTPYCLERLSGDeERIKSVTICHTESGQREDIEV 241
Cdd:COG0492 149 GGDSALEEALYLTKFASKVTLIHRRDELRASKILVERLRANPkIEVLWNTEVTEIEGD-GRVEGVTLKNVKTGEEKELEV 227
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 639241821 242 DELIINHGFKIDLGPMMEWGLEI-EEGRVKADRHMRTNLPGVFVAGDAAFYesKLRLIAGGFTEGPTAVNSAKAYLDPK 319
Cdd:COG0492 228 DGVFVAIGLKPNTELLKGLGLELdEDGYIVVDEDMETSVPGVFAAGDVRDY--KYRQAATAAGEGAIAALSAARYLEPL 304
|
|
| TRX_reduct |
TIGR01292 |
thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a ... |
9-316 |
2.50e-39 |
|
thioredoxin-disulfide reductase; This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (pfam00070). [Energy metabolism, Electron transport]
Pssm-ID: 273540 [Multi-domain] Cd Length: 299 Bit Score: 140.84 E-value: 2.50e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 9 DVTIIGGGPIGLFTAFYCGMRELKTKVIEfLPKLGGKVSLffpEKIIRDIGGIP-GIAGKQLIEQLKEQAATFDPDIVMN 87
Cdd:TIGR01292 1 DVIIIGAGPAGLTAAIYAARANLKPLLIE-GMEPGGQLTT---TTEVENYPGFPeGISGPELMEKMKEQAVKFGAEIIYE 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 88 QrVTGFERLDDGIIVLTGSEGEkHYTRTVILACGMGTLEvNEFDSEDAarYAGKNLHYgVEKLDA--FKGKHVVISGGGD 165
Cdd:TIGR01292 77 E-VIKVDKSDRPFKVYTGDGKE-YTAKAVIIATGASARK-LGIPGEDE--FWGRGVSY-CATCDGpfFKNKEVAVVGGGD 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 166 TAVDWANELEPIAASVTVVHRRQEFGGMESSVTK-MKQSSVRVLTPYCLERLSGDeERIKSVTICHTESGQREDIEVDEL 244
Cdd:TIGR01292 151 SAIEEALYLTRIAKKVTLVHRRDKFRAEKILLDRlKKNPKIEFLWNSTVEEIVGD-NKVEGVKIKNTVTGEEEELEVDGV 229
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 639241821 245 IINHGFKIDLGPMMEWGLEIEEGRVKADRHMRTNLPGVFVAGDAAfyESKLRLIAGGFTEGPTAVNSAKAYL 316
Cdd:TIGR01292 230 FIAIGHEPNTELLKGLLELDENGYIVTDEGMRTSVPGVFAAGDVR--DKGYRQAVTAAGDGCIAALSAERYL 299
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
8-287 |
3.79e-21 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 91.61 E-value: 3.79e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 8 YDVTIIGGGPIGLFTAFYCGMRELKTKVIEFlpklgGKVSLFF---PEKIIRDIGGIPGIA--GKQLIEQLKEQAATFDP 82
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGGKVTLIED-----EGTCPYGgcvLSKALLGAAEAPEIAslWADLYKRKEEVVKKLNN 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 83 DI--VMNQRVTGFERlDDGIIVLTGSEGEKHYT---RTVILACGMgtlEVNEFDSEDAARYAGKNLHY--GVEKL-DAFK 154
Cdd:pfam07992 76 GIevLLGTEVVSIDP-GAKKVVLEELVDGDGETityDRLVIATGA---RPRLPPIPGVELNVGFLVRTldSAEALrLKLL 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 155 GKHVVISGGGDTAVDWANELEPIAASVTVVHRRQEFG-GMESSVTK-----MKQSSVRVLTPYCLERLSGDEERIKsvti 228
Cdd:pfam07992 152 PKRVVVVGGGYIGVELAAALAKLGKEVTLIEALDRLLrAFDEEISAalekaLEKNGVEVRLGTSVKEIIGDGDGVE---- 227
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 229 CHTESGQRedIEVDELIINHGFKIDLGPMMEWGLEIEE-GRVKADRHMRTNLPGVFVAGD 287
Cdd:pfam07992 228 VILKDGTE--IDADLVVVAIGRRPNTELLEAAGLELDErGGIVVDEYLRTSVPGIYAAGD 285
|
|
| PRK15317 |
PRK15317 |
alkyl hydroperoxide reductase subunit F; Provisional |
3-316 |
1.08e-19 |
|
alkyl hydroperoxide reductase subunit F; Provisional
Pssm-ID: 237942 [Multi-domain] Cd Length: 517 Bit Score: 89.45 E-value: 1.08e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 3 ENQEVYDVTIIGGGPIGLFTAFYCGMRELKTKVI-EflpKLGGKVSlffpekiirDIGGI------PGIAGKQLIEQLKE 75
Cdd:PRK15317 207 NAKDPYDVLVVGGGPAGAAAAIYAARKGIRTGIVaE---RFGGQVL---------DTMGIenfisvPETEGPKLAAALEE 274
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 76 QAATFDPDIVMNQRVTGFERlDDGIIVLTGSEGEKHYTRTVILACGMGTLEVN---EfdsedaARYAGKNLHY-----Gv 147
Cdd:PRK15317 275 HVKEYDVDIMNLQRASKLEP-AAGLIEVELANGAVLKAKTVILATGARWRNMNvpgE------DEYRNKGVAYcphcdG- 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 148 eklDAFKGKHVVISGGGDTAVDWANELEPIAASVTVVhrrqEFGgmessvTKMKQ-----------SSVRVLTPYCLERL 216
Cdd:PRK15317 347 ---PLFKGKRVAVIGGGNSGVEAAIDLAGIVKHVTVL----EFA------PELKAdqvlqdklrslPNVTIITNAQTTEV 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 217 SGDEERIKSVTICHTESGQREDIEVDELIInhgfKIDLGPMMEWgLE--IE---EGRVKADRHMRTNLPGVFVAGDAAFY 291
Cdd:PRK15317 414 TGDGDKVTGLTYKDRTTGEEHHLELEGVFV----QIGLVPNTEW-LKgtVElnrRGEIIVDARGATSVPGVFAAGDCTTV 488
|
330 340
....*....|....*....|....*
gi 639241821 292 ESKLRLIAGGftEGPTAVNSAKAYL 316
Cdd:PRK15317 489 PYKQIIIAMG--EGAKAALSAFDYL 511
|
|
| Pyr_redox_3 |
pfam13738 |
Pyridine nucleotide-disulphide oxidoreductase; |
64-286 |
5.86e-18 |
|
Pyridine nucleotide-disulphide oxidoreductase;
Pssm-ID: 404603 [Multi-domain] Cd Length: 296 Bit Score: 82.66 E-value: 5.86e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 64 IAGKQLIEQLKEQAATFDPDIVMNQRVTGFERLDDGIIVLTgsEGEKHYTRTVILACGmgtlevnEFDSEDAARYAGKNL 143
Cdd:pfam13738 72 PSGNEYAEYLRRVADHFELPINLFEEVTSVKKEDDGFVVTT--SKGTYQARYVIIATG-------EFDFPNKLGVPELPK 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 144 HYG-VEKLDAFKGKHVVISGGGDTAVDWANELEPIAASVTVVHRRQEFGGMESSVtkmkqsSVRvLTPYCLERLSG--DE 220
Cdd:pfam13738 143 HYSyVKDFHPYAGQKVVVIGGYNSAVDAALELVRKGARVTVLYRGSEWEDRDSDP------SYS-LSPDTLNRLEElvKN 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 221 ERIK----SVTICHTESGQREDIEVDE---LIINH------GFKIDLGPMMEWGLEIEE-GRVKADRH-MRTNLPGVFVA 285
Cdd:pfam13738 216 GKIKahfnAEVKEITEVDVSYKVHTEDgrkVTSNDdpilatGYHPDLSFLKKGLFELDEdGRPVLTEEtESTNVPGLFLA 295
|
.
gi 639241821 286 G 286
Cdd:pfam13738 296 G 296
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
10-293 |
1.84e-16 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 79.79 E-value: 1.84e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 10 VTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGKVSLFFPE-KIIRDIggipgIAgkQLIEQLKEQAATFdpdiVMNQ 88
Cdd:COG0493 124 VAVVGSGPAGLAAAYQLARAGHEVTVFEALDKPGGLLRYGIPEfRLPKDV-----LD--REIELIEALGVEF----RTNV 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 89 RVTG---FERLddgiivltgsegEKHYTRtVILACGMGT---LEVnefDSEDAaryagKNLHYGVEKLDAF--------- 153
Cdd:COG0493 193 EVGKditLDEL------------LEEFDA-VFLATGAGKprdLGI---PGEDL-----KGVHSAMDFLTAVnlgeapdti 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 154 --KGKHVVISGGGDTAVD---WANELEpiAASVTVVHRRQEfggmessvTKMKQSSVRV-------------LTPyclER 215
Cdd:COG0493 252 laVGKRVVVIGGGNTAMDcarTALRLG--AESVTIVYRRTR--------EEMPASKEEVeealeegveflflVAP---VE 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 216 LSGDEE-RIKSVTICHTE------SGQR---------EDIEVDELIINHGFKIDLGPMME-WGLEIEE-GRVKAD-RHMR 276
Cdd:COG0493 319 IIGDENgRVTGLECVRMElgepdeSGRRrpvpiegseFTLPADLVILAIGQTPDPSGLEEeLGLELDKrGTIVVDeETYQ 398
|
330
....*....|....*..
gi 639241821 277 TNLPGVFVAGDAAFYES 293
Cdd:COG0493 399 TSLPGVFAGGDAVRGPS 415
|
|
| PRK10262 |
PRK10262 |
thioredoxin reductase; Provisional |
12-321 |
1.26e-15 |
|
thioredoxin reductase; Provisional
Pssm-ID: 182343 [Multi-domain] Cd Length: 321 Bit Score: 76.25 E-value: 1.26e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 12 IIGGGPIGLFTAFYCGMRELKTKVIEFLPKlGGKVSlffpekIIRDIGGIPG----IAGKQLIEQLKEQAATFDPDIVMN 87
Cdd:PRK10262 11 ILGSGPAGYTAAVYAARANLQPVLITGMEK-GGQLT------TTTEVENWPGdpndLTGPLLMERMHEHATKFETEIIFD 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 88 QrvTGFERLDDGIIVLTGSEGEkHYTRTVILACGMGTLEVNeFDSEDAARYAGKNlhyGVEKLDAF--KGKHVVISGGGD 165
Cdd:PRK10262 84 H--INKVDLQNRPFRLTGDSGE-YTCDALIIATGASARYLG-LPSEEAFKGRGVS---ACATCDGFfyRNQKVAVIGGGN 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 166 TAVDWANELEPIAASVTVVHRRQEFGG----MESSVTKMKQSSVRVLTPYCLERLSGDEERIKSVTICHTESGQR-EDIE 240
Cdd:PRK10262 157 TAVEEALYLSNIASEVHLIHRRDGFRAekilIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNiESLD 236
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 241 VDELIINHGFKIDLGpMMEWGLEIEEGRVKADRHM-----RTNLPGVFVAGDAAFYESKLRLIAGGftEGPTAVNSAKAY 315
Cdd:PRK10262 237 VAGLFVAIGHSPNTA-IFEGQLELENGYIKVQSGIhgnatQTSIPGVFAAGDVMDHIYRQAITSAG--TGCMAALDAERY 313
|
....*.
gi 639241821 316 LDPKAE 321
Cdd:PRK10262 314 LDGLAD 319
|
|
| PRK11749 |
PRK11749 |
dihydropyrimidine dehydrogenase subunit A; Provisional |
10-289 |
3.43e-14 |
|
dihydropyrimidine dehydrogenase subunit A; Provisional
Pssm-ID: 236967 [Multi-domain] Cd Length: 457 Bit Score: 72.90 E-value: 3.43e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 10 VTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGkVSLFfpekiirdigGIPG------IAgKQLIEQLKEQAATFDPD 83
Cdd:PRK11749 143 VAVIGAGPAGLTAAHRLARKGYDVTIFEARDKAGG-LLRY----------GIPEfrlpkdIV-DREVERLLKLGVEIRTN 210
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 84 IVMNQRVTgFERLDDGiivltgsegekhYtRTVILACGMG---TLEVnefDSEDAAryagkNLHYGVE----------KL 150
Cdd:PRK11749 211 TEVGRDIT-LDELRAG------------Y-DAVFIGTGAGlprFLGI---PGENLG-----GVYSAVDfltrvnqavaDY 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 151 DAFKGKHVVISGGGDTAVDWANELepI---AASVTVVHRR--QEFGGMESSVTKMKQSSVRVLTPYCLERLSGDEERIKS 225
Cdd:PRK11749 269 DLPVGKRVVVIGGGNTAMDAARTA--KrlgAESVTIVYRRgrEEMPASEEEVEHAKEEGVEFEWLAAPVEILGDEGRVTG 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 226 VTICHTESGQRED--------------IEVDELIINHGFKIDLgPMMEW--GLEIEE--GRVKADRHMRTNLPGVFVAGD 287
Cdd:PRK11749 347 VEFVRMELGEPDAsgrrrvpiegseftLPADLVIKAIGQTPNP-LILSTtpGLELNRwgTIIADDETGRTSLPGVFAGGD 425
|
..
gi 639241821 288 AA 289
Cdd:PRK11749 426 IV 427
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
154-288 |
4.35e-12 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 66.73 E-value: 4.35e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 154 KGKHVVISGGGDTAVDW---ANELEpiAASVTVVH-------RRQEFGGMESSVTKMKQSSVR---VLTPYCL--ERLSG 218
Cdd:PRK12810 280 KGKHVVVIGGGDTGMDCvgtAIRQG--AKSVTQRDimpmppsRRNKNNPWPYWPMKLEVSNAHeegVEREFNVqtKEFEG 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 219 DEERIKSVTICHTESGQR---------EDIEVDELIINHGFkidLGPMMEW----GLEIEE-GRVKA-DRHMRTNLPGVF 283
Cdd:PRK12810 358 ENGKVTGVKVVRTELGEGdfepvegseFVLPADLVLLAMGF---TGPEAGLlaqfGVELDErGRVAApDNAYQTSNPKVF 434
|
....*
gi 639241821 284 VAGDA 288
Cdd:PRK12810 435 AAGDM 439
|
|
| PRK12771 |
PRK12771 |
putative glutamate synthase (NADPH) small subunit; Provisional |
10-289 |
6.82e-12 |
|
putative glutamate synthase (NADPH) small subunit; Provisional
Pssm-ID: 237198 [Multi-domain] Cd Length: 564 Bit Score: 66.05 E-value: 6.82e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 10 VTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGKVsLF------FPEKII-RDIGGI--PGIagkqlieqlkeqaatf 80
Cdd:PRK12771 140 VAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMM-RYgipayrLPREVLdAEIQRIldLGV---------------- 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 81 dpDIVMNQRVTgferlDDgiivLTGSEGEKHYTrTVILACG--MG-TLEVnefDSEDAARY--AGKNLH-YGVEKLDaFK 154
Cdd:PRK12771 203 --EVRLGVRVG-----ED----ITLEQLEGEFD-AVFVAIGaqLGkRLPI---PGEDAAGVldAVDFLRaVGEGEPP-FL 266
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 155 GKHVVISGGGDTAVDWANELEPI-AASVTVVHRR---------QEFGGMESSVTKMK--------------QSSVRVLTP 210
Cdd:PRK12771 267 GKRVVVIGGGNTAMDAARTARRLgAEEVTIVYRRtredmpahdEEIEEALREGVEINwlrtpveiegdengATGLRVITV 346
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 211 yclERLSGDEE-RIKSVTichtesGQREDIEVDELIINHGFKIDLGPMMEW-GLEIEEGRVKADRH-MRTNLPGVFVAGD 287
Cdd:PRK12771 347 ---EKMELDEDgRPSPVT------GEEETLEADLVVLAIGQDIDSAGLESVpGVEVGRGVVQVDPNfMMTGRPGVFAGGD 417
|
..
gi 639241821 288 AA 289
Cdd:PRK12771 418 MV 419
|
|
| FadH2 |
COG0446 |
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase ... |
59-289 |
2.58e-10 |
|
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase [Lipid transport and metabolism];
Pssm-ID: 440215 [Multi-domain] Cd Length: 322 Bit Score: 60.60 E-value: 2.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 59 GGIPGIagKQLIEQLKEQAATFDPDIVMNQRVTGFERlDDGIIVLTGseGEK-HYTRtVILACGmGTLEVNEFDSEDAAR 137
Cdd:COG0446 30 GGIKDP--EDLLVRTPESFERKGIDVRTGTEVTAIDP-EAKTVTLRD--GETlSYDK-LVLATG-ARPRPPPIPGLDLPG 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 138 -YAGKNLHYGV---EKLDAFKGKHVVISGGGdtavdwanelePIA-----------ASVTVVHRRQE-FGGMESSVTK-- 199
Cdd:COG0446 103 vFTLRTLDDADalrEALKEFKGKRAVVIGGG-----------PIGlelaealrkrgLKVTLVERAPRlLGVLDPEMAAll 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 200 ---MKQSSVRVLTPYCLERLSGDEEriksVTIcHTESGqrEDIEVDELIINHGFKIDLGPMMEWGLEI-EEGRVKADRHM 275
Cdd:COG0446 172 eeeLREHGVELRLGETVVAIDGDDK----VAV-TLTDG--EEIPADLVVVAPGVRPNTELAKDAGLALgERGWIKVDETL 244
|
250
....*....|....
gi 639241821 276 RTNLPGVFVAGDAA 289
Cdd:COG0446 245 QTSDPDVYAAGDCA 258
|
|
| lipoamide_DH |
TIGR01350 |
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a ... |
8-288 |
2.65e-10 |
|
dihydrolipoamide dehydrogenase; This model describes dihydrolipoamide dehydrogenase, a flavoprotein that acts in a number of ways. It is the E3 component of dehydrogenase complexes for pyruvate, 2-oxoglutarate, 2-oxoisovalerate, and acetoin. It can also serve as the L protein of the glycine cleavage system. This family includes a few members known to have distinct functions (ferric leghemoglobin reductase and NADH:ferredoxin oxidoreductase) but that may be predicted by homology to act as dihydrolipoamide dehydrogenase as well. The motif GGXCXXXGCXP near the N-terminus contains a redox-active disulfide.
Pssm-ID: 273568 [Multi-domain] Cd Length: 460 Bit Score: 61.12 E-value: 2.65e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 8 YDVTIIGGGPIGLFTAFYCGMRELKTKVIEfLPKLGGkVSLffpekiirDIGGIPG---IAGKQLIEQLKEQA------- 77
Cdd:TIGR01350 2 YDVIVIGGGPGGYVAAIRAAQLGLKVALVE-KEYLGG-TCL--------NVGCIPTkalLHSAEVYDEIKHAKdlgieve 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 78 -ATFD-------PDIVMNQRVTGFERL----------------DDGIIVLTGSEGEKHYT-RTVILACGMgtlEVNEFDS 132
Cdd:TIGR01350 72 nVSVDwekmqkrKNKVVKKLVGGVSGLlkknkvtvikgeakflDPGTVSVTGENGEETLEaKNIIIATGS---RPRSLPG 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 133 EDAarYAGKNLHYGVEKLdAFKG--KHVVISGGGDTAVDWANELEPIAASVTVVhrrqEF-----GGMESSVTK-----M 200
Cdd:TIGR01350 149 PFD--FDGKVVITSTGAL-NLEEvpESLVIIGGGVIGIEFASIFASLGSKVTVI----EMldrilPGEDAEVSKvlqkaL 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 201 KQSSVRVLTPYCLERLSGDEERIksvtICHTESGQREDIEVDELIINHGFKIDLGP--MMEWGLEIEE-GRVKADRHMRT 277
Cdd:TIGR01350 222 KKKGVKILTNTKVTAVEKNDDQV----TYENKGGETETLTGEKVLVAVGRKPNTEGlgLEKLGVELDErGRIVVDEYMRT 297
|
330
....*....|.
gi 639241821 278 NLPGVFVAGDA 288
Cdd:TIGR01350 298 NVPGIYAIGDV 308
|
|
| Lpd |
COG1249 |
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex ... |
8-289 |
3.39e-10 |
|
Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase [Energy production and conversion]; Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase is part of the Pathway/BioSystem: Glycine cleavagePyruvate oxidation
Pssm-ID: 440861 [Multi-domain] Cd Length: 456 Bit Score: 60.87 E-value: 3.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 8 YDVTIIGGGPIGLFTAFYCGMRELKTKVIEFlPKLGG----------KVsLFFPEKIIRDI---------GGIPGIAGKQ 68
Cdd:COG1249 4 YDLVVIGAGPGGYVAAIRAAQLGLKVALVEK-GRLGGtclnvgcipsKA-LLHAAEVAHEArhaaefgisAGAPSVDWAA 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 69 LIEQLKEQAATFDPDIVMN------QRVTGFERLDDG--IIVltgsEGEKHYT-RTVILACG--------MGTLEVNEFD 131
Cdd:COG1249 82 LMARKDKVVDRLRGGVEELlkkngvDVIRGRARFVDPhtVEV----TGGETLTaDHIVIATGsrprvppiPGLDEVRVLT 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 132 SEDAaryagknlhYGVEKLdafkGKHVVISGGGDTAVdwanELEPIAAS----VTVVHRRQEF-GGMESSVTK-----MK 201
Cdd:COG1249 158 SDEA---------LELEEL----PKSLVVIGGGYIGL----EFAQIFARlgseVTLVERGDRLlPGEDPEISEalekaLE 220
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 202 QSSVRVLTPYCLERLSGDEERIKsvtiCHTESGQRED-IEVDELIINHGFK-----IDLGpmmEWGLEIEE-GRVKADRH 274
Cdd:COG1249 221 KEGIDILTGAKVTSVEKTGDGVT----VTLEDGGGEEaVEADKVLVATGRRpntdgLGLE---AAGVELDErGGIKVDEY 293
|
330
....*....|....*
gi 639241821 275 MRTNLPGVFVAGDAA 289
Cdd:COG1249 294 LRTSVPGIYAIGDVT 308
|
|
| PRK12770 |
PRK12770 |
putative glutamate synthase subunit beta; Provisional |
10-319 |
1.98e-09 |
|
putative glutamate synthase subunit beta; Provisional
Pssm-ID: 237197 [Multi-domain] Cd Length: 352 Bit Score: 58.08 E-value: 1.98e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 10 VTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGKVSLFFPEKIIRdiggIPGIagKQLIEQLKEQAATFDPDI----- 84
Cdd:PRK12770 21 VAIIGAGPAGLAAAGYLACLGYEVHVYDKLPEPGGLMLFGIPEFRIP----IERV--REGVKELEEAGVVFHTRTkvccg 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 85 ---------VMNQRVTGFERL---DDGIIVLTGS--------EGEKhytrtviLACGMGTLE-VNEFDsedAARYAgknl 143
Cdd:PRK12770 95 eplheeegdEFVERIVSLEELvkkYDAVLIATGTwksrklgiPGED-------LPGVYSALEyLFRIR---AAKLG---- 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 144 HYGVEKLDAFKGKHVVISGGGDTAVDWANE-LEPIAASVTVVHRR--QEFGGMESSVTKMKQSSVRVL---TPyclERLS 217
Cdd:PRK12770 161 YLPWEKVPPVEGKKVVVVGAGLTAVDAALEaVLLGAEKVYLAYRRtiNEAPAGKYEIERLIARGVEFLelvTP---VRII 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 218 GdEERIKSVTICHTE---------------SGQREDIEVDELIINHGfKIDLGPMMEWGLEIE---EGRVKADRHMRTNL 279
Cdd:PRK12770 238 G-EGRVEGVELAKMRlgepdesgrprpvpiPGSEFVLEADTVVFAIG-EIPTPPFAKECLGIElnrKGEIVVDEKHMTSR 315
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 639241821 280 PGVFVAGDAAFYESKlrlIAGGFTEGPTAVNSAKAYLDPK 319
Cdd:PRK12770 316 EGVFAAGDVVTGPSK---IGKAIKSGLRAAQSIHEWLDLK 352
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
6-187 |
1.29e-08 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 56.02 E-value: 1.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 6 EVYDVTIIGGGPIGLFTAFYcgmreLKTKVIEFL-----PKLGG----------------KVS--LFFPEKiirdiGGIP 62
Cdd:COG2072 5 EHVDVVVIGAGQAGLAAAYH-----LRRAGIDFVvlekaDDVGGtwrdnrypglrldtpsHLYslPFFPNW-----SDDP 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 63 GIAGKQLIEQ-LKEQAATFD--PDIVMNQRVTGFE-RLDDGIIVLTGSEGEKHYTRTVILAcgMGTLE---VNEFDSEDa 135
Cdd:COG2072 75 DFPTGDEILAyLEAYADKFGlrRPIRFGTEVTSARwDEADGRWTVTTDDGETLTARFVVVA--TGPLSrpkIPDIPGLE- 151
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 639241821 136 aRYAGKNLH-----YGVEkldaFKGKHVVISGGGDTAVDWANELEPIAASVTVVHRR 187
Cdd:COG2072 152 -DFAGEQLHsadwrNPVD----LAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRT 203
|
|
| PRK12779 |
PRK12779 |
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; ... |
10-289 |
1.21e-07 |
|
putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Pssm-ID: 183740 [Multi-domain] Cd Length: 944 Bit Score: 53.30 E-value: 1.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 10 VTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGKVSLFFPE-----KIIRDI-GGIPGIAGKQLIEQLKEQAATFDpd 83
Cdd:PRK12779 309 IAVVGSGPSGLINAYLLAVEGFPVTVFEAFHDLGGVLRYGIPEfrlpnQLIDDVvEKIKLLGGRFVKNFVVGKTATLE-- 386
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 84 ivmNQRVTGFERlddgIIVLTGS--------EGEkHYtrtvilacgMGTLEVNEFDSEdaaryagKNLHYGVEK-----L 150
Cdd:PRK12779 387 ---DLKAAGFWK----IFVGTGAglptfmnvPGE-HL---------LGVMSANEFLTR-------VNLMRGLDDdyetpL 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 151 DAFKGKHVVISGGGDTAVDWANELEPIAASVTVVHRRQEfGGMESSVTKMKQSSVRVLTpycLERLSGDEERI---KSVT 227
Cdd:PRK12779 443 PEVKGKEVFVIGGGNTAMDAARTAKRLGGNVTIVYRRTK-SEMPARVEELHHALEEGIN---LAVLRAPREFIgddHTHF 518
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 228 ICHT-----------ESGQR--------EDIEVDELIINHGFkiDLGPMM----------EWG-LEIEEGRvkadrhMRT 277
Cdd:PRK12779 519 VTHAlldvnelgepdKSGRRspkptgeiERVPVDLVIMALGN--TANPIMkdaepglktnKWGtIEVEKGS------QRT 590
|
330
....*....|..
gi 639241821 278 NLPGVFVAGDAA 289
Cdd:PRK12779 591 SIKGVYSGGDAA 602
|
|
| PRK12814 |
PRK12814 |
putative NADPH-dependent glutamate synthase small subunit; Provisional |
10-287 |
1.27e-07 |
|
putative NADPH-dependent glutamate synthase small subunit; Provisional
Pssm-ID: 139246 [Multi-domain] Cd Length: 652 Bit Score: 53.19 E-value: 1.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 10 VTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGG----KVSLF-FPEKII-RDIggipgiagkqliEQLKEQAATFDPD 83
Cdd:PRK12814 196 VAIIGAGPAGLTAAYYLLRKGHDVTIFDANEQAGGmmryGIPRFrLPESVIdADI------------APLRAMGAEFRFN 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 84 IVMNQRVTgFERLD---DGIIVLTGSE--------GEKhyTRTVIlaCGMGTLEvnefdseDAAryAGKNLHygveklda 152
Cdd:PRK12814 264 TVFGRDIT-LEELQkefDAVLLAVGAQkaskmgipGEE--LPGVI--SGIDFLR-------NVA--LGTALH-------- 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 153 fKGKHVVISGGGDTAVDWA-NELEPIAASVTVVHRR--QEfggMESSVTKMKQS-----SVRVLT-PYCLERLSG----- 218
Cdd:PRK12814 322 -PGKKVVVIGGGNTAIDAArTALRLGAESVTILYRRtrEE---MPANRAEIEEAlaegvSLRELAaPVSIERSEGglelt 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 219 ---------DEE-RIKSVTICHTESgqreDIEVDELIINHGFKIDLGPMMEWGLEIEE-GRVKADRH-MRTNLPGVFVAG 286
Cdd:PRK12814 398 aikmqqgepDESgRRRPVPVEGSEF----TLQADTVISAIGQQVDPPIAEAAGIGTSRnGTVKVDPEtLQTSVAGVFAGG 473
|
.
gi 639241821 287 D 287
Cdd:PRK12814 474 D 474
|
|
| YdhS |
COG4529 |
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only]; |
8-171 |
2.29e-07 |
|
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
Pssm-ID: 443597 [Multi-domain] Cd Length: 466 Bit Score: 52.26 E-value: 2.29e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 8 YDVTIIGGGPIGLFTAFYCgMRELKTK----VIEFLPKLG------------------GKVSLFFPEKI-------IRDI 58
Cdd:COG4529 6 KRIAIIGGGASGTALAIHL-LRRAPEPlritLFEPRPELGrgvaystdspehllnvpaGRMSAFPDDPDhflrwlrENGA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 59 GGIPGIAGKQLI----------EQLKEQAATFDPDI---VMNQRVTGFERLDDGIIVLTGSeGEKHYTRTVILACGMGTL 125
Cdd:COG4529 85 RAAPAIDPDAFVprrlfgeylrERLAEALARAPAGVrlrHIRAEVVDLERDDGGYRVTLAD-GETLRADAVVLATGHPPP 163
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 639241821 126 EVNEFDSEDAARYagknLH--YGVEKLDAFK-GKHVVISGGGDTAVDWA 171
Cdd:COG4529 164 APPPGLAAGSPRY----IAdpWPPGALARIPpDARVLIIGTGLTAIDVV 208
|
|
| PRK12778 |
PRK12778 |
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate ... |
10-288 |
3.67e-07 |
|
bifunctional dihydroorotate dehydrogenase B NAD binding subunit/NADPH-dependent glutamate synthase;
Pssm-ID: 237200 [Multi-domain] Cd Length: 752 Bit Score: 51.67 E-value: 3.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 10 VTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGKVSLFFPEkiIRdiggIPGIAGKQLIEQLKEQAATFDPDIVMNQR 89
Cdd:PRK12778 434 VAVIGSGPAGLSFAGDLAKRGYDVTVFEALHEIGGVLKYGIPE--FR----LPKKIVDVEIENLKKLGVKFETDVIVGKT 507
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 90 VT-------GFerldDGIIVLTGS--------EGEKhytrtvilacGMGTLEVNEFDSEdaaryagknlhygVEKLDAFK 154
Cdd:PRK12778 508 ITieeleeeGF----KGIFIASGAglpnfmniPGEN----------SNGVMSSNEYLTR-------------VNLMDAAS 560
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 155 ---------GKHVVISGGGDTAVDWANELEPIAA-SVTVVHRR--QEFGGMESSVTKMKQSSVRVLTPYCLERLSGDEE- 221
Cdd:PRK12778 561 pdsdtpikfGKKVAVVGGGNTAMDSARTAKRLGAeRVTIVYRRseEEMPARLEEVKHAKEEGIEFLTLHNPIEYLADEKg 640
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 222 RIKSVTICHTE------SGQR---------EDIEVDELIINHGFKID-LGPMMEWGLEI-EEGRVKADRHMRTNLPGVFV 284
Cdd:PRK12778 641 WVKQVVLQKMElgepdaSGRRrpvaipgstFTVDVDLVIVSVGVSPNpLVPSSIPGLELnRKGTIVVDEEMQSSIPGIYA 720
|
....
gi 639241821 285 AGDA 288
Cdd:PRK12778 721 GGDI 724
|
|
| Pyr_redox |
pfam00070 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
157-227 |
4.79e-07 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 425450 [Multi-domain] Cd Length: 80 Bit Score: 46.81 E-value: 4.79e-07
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 639241821 157 HVVISGGGDTAVDWANELEPIAASVTVVHRRQEFGGMESS------VTKMKQSSVRVLTPYCLERLSGDEERIKSVT 227
Cdd:pfam00070 1 RVVVVGGGYIGLELAGALARLGSKVTVVERRDRLLPGFDPeiakilQEKLEKNGIEFLLNTTVEAIEGNGDGVVVVL 77
|
|
| PRK12809 |
PRK12809 |
putative oxidoreductase Fe-S binding subunit; Reviewed |
10-288 |
1.34e-06 |
|
putative oxidoreductase Fe-S binding subunit; Reviewed
Pssm-ID: 183762 [Multi-domain] Cd Length: 639 Bit Score: 50.02 E-value: 1.34e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 10 VTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGKVSLFFPekiirdiggiPGIAGKQLIEQLKEQAATFDPDIVMNQR 89
Cdd:PRK12809 313 VAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIP----------PFKLDKTVLSQRREIFTAMGIDFHLNCE 382
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 90 V---TGFERLD---DGIIVLTGSEG------EKHYTRTVILACGMGTLEVNEFDS-EDAARYAgknlhygvekLDAFKGK 156
Cdd:PRK12809 383 IgrdITFSDLTseyDAVFIGVGTYGmmradlPHEDAPGVIQALPFLTAHTRQLMGlPESEEYP----------LTDVEGK 452
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 157 HVVISGGGDTAVD-WANELEPIAASVTVVHRRQEFG--GMESSVTKMKQSSVRVLTPYCLERLSGDEE-RIKSVTICHTE 232
Cdd:PRK12809 453 RVVVLGGGDTTMDcLRTSIRLNAASVTCAYRRDEVSmpGSRKEVVNAREEGVEFQFNVQPQYIACDEDgRLTAVGLIRTA 532
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 639241821 233 ---------------SGQREDIEVDELIINHGFKIDLGPMME--------WGLeIEEGRvKADRHMRTNLPGVFVAGDA 288
Cdd:PRK12809 533 mgepgpdgrrrprpvAGSEFELPADVLIMAFGFQAHAMPWLQgsgikldkWGL-IQTGD-VGYLPTQTHLKKVFAGGDA 609
|
|
| PRK12831 |
PRK12831 |
putative oxidoreductase; Provisional |
10-288 |
5.20e-06 |
|
putative oxidoreductase; Provisional
Pssm-ID: 183780 [Multi-domain] Cd Length: 464 Bit Score: 47.71 E-value: 5.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 10 VTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGKVSLFFPE------KIIrdiggipgiagKQLIEQLKEQAATFDPD 83
Cdd:PRK12831 143 VAVIGSGPAGLTCAGDLAKMGYDVTIFEALHEPGGVLVYGIPEfrlpkeTVV-----------KKEIENIKKLGVKIETN 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 84 IVMNQRVTGFERLD----DGIIVLTGSEGEKHYTRTVILAcgMGTLEVNEFDSEdaaryagKNLhygvekLDAFK----- 154
Cdd:PRK12831 212 VVVGKTVTIDELLEeegfDAVFIGSGAGLPKFMGIPGENL--NGVFSANEFLTR-------VNL------MKAYKpeydt 276
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 155 ----GKHVVISGGGDTAVDWANELEPIAASVTVVHRR--QEFGGMESSVTKMKQSSVRVLTPYCLERLSGDEE-RIKSVT 227
Cdd:PRK12831 277 pikvGKKVAVVGGGNVAMDAARTALRLGAEVHIVYRRseEELPARVEEVHHAKEEGVIFDLLTNPVEILGDENgWVKGMK 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 228 ICHTE------SGQRE---------DIEVDELIINHGfkidLGP-----MMEWGLEIEE-GRVKADRHM-RTNLPGVFVA 285
Cdd:PRK12831 357 CIKMElgepdaSGRRRpveiegsefVLEVDTVIMSLG----TSPnplisSTTKGLKINKrGCIVADEETgLTSKEGVFAG 432
|
...
gi 639241821 286 GDA 288
Cdd:PRK12831 433 GDA 435
|
|
| HI0933_like |
pfam03486 |
HI0933-like protein; |
8-121 |
5.25e-06 |
|
HI0933-like protein;
Pssm-ID: 427330 [Multi-domain] Cd Length: 406 Bit Score: 47.58 E-value: 5.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 8 YDVTIIGGGPIGLFTAFYCGMRELKTKVIEFLPKLGGKV-----------------------------------SLFFPE 52
Cdd:pfam03486 1 FDVIVIGGGAAGLMAAISAAKRGRRVLLIEKGKKLGRKIlisgggrcnvtnlseepdnflsrypgnpkflksalSRFTPW 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 53 KIIRDIG--GIPGIAG------------KQLIEQLKEQAATFDPDIVMNQRVTGFERLDDGIIVLTgSEGEKHYTRTVIL 118
Cdd:pfam03486 81 DFIAFFEslGVPLKEEdhgrlfpdsdkaSDIVDALLNELKELGVKIRLRTRVLSVEKDDDGRFRVK-TGGEELEADSLVL 159
|
...
gi 639241821 119 ACG 121
Cdd:pfam03486 160 ATG 162
|
|
| NirB |
COG1251 |
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion]; |
154-314 |
5.51e-06 |
|
NAD(P)H-nitrite reductase, large subunit [Energy production and conversion];
Pssm-ID: 440863 [Multi-domain] Cd Length: 402 Bit Score: 47.83 E-value: 5.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 154 KGKHVVISGGGDTAVDWANELEPIAASVTVVHR------RQ---EFGGM-ESSVTKMKqssVRVLTPYCLERLSGDEeRI 223
Cdd:COG1251 141 PGKRVVVIGGGLIGLEAAAALRKRGLEVTVVERaprllpRQldeEAGALlQRLLEALG---VEVRLGTGVTEIEGDD-RV 216
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 224 KSVTichTESGQRedIEVDELIINHGFKidlgPMMEW----GLEIEEGrVKADRHMRTNLPGVFVAGDAAFYESKlrlIA 299
Cdd:COG1251 217 TGVR---LADGEE--LPADLVVVAIGVR----PNTELaraaGLAVDRG-IVVDDYLRTSDPDIYAAGDCAEHPGP---VY 283
|
170
....*....|....*..
gi 639241821 300 GGFTEG--PTAVNSAKA 314
Cdd:COG1251 284 GRRVLElvAPAYEQARV 300
|
|
| PRK06292 |
PRK06292 |
dihydrolipoamide dehydrogenase; Validated |
8-300 |
1.10e-05 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235774 [Multi-domain] Cd Length: 460 Bit Score: 46.71 E-value: 1.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 8 YDVTIIGGGPIGLFTAFYCGMRELKTKVIEFLPkLGG----------KVsLFFPEKIIRDI---------GGIPGIAGKQ 68
Cdd:PRK06292 4 YDVIVIGAGPAGYVAARRAAKLGKKVALIEKGP-LGGtclnvgcipsKA-LIAAAEAFHEAkhaeefgihADGPKIDFKK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 69 LIEQLKEQAATF----------DPDIvmnQRVTGFER-LDDGIIVLtgsEGEKHYTRTVILACGMGTLEVNEFDSEDAAR 137
Cdd:PRK06292 82 VMARVRRERDRFvggvveglekKPKI---DKIKGTARfVDPNTVEV---NGERIEAKNIVIATGSRVPPIPGVWLILGDR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 138 YAGKNlhygveklDAFK----GKHVVISGGGDTAVDWANELEPIAASVTVVHRRQEFGGMESsvTKMKQSSVRVLTPYC- 212
Cdd:PRK06292 156 LLTSD--------DAFEldklPKSLAVIGGGVIGLELGQALSRLGVKVTVFERGDRILPLED--PEVSKQAQKILSKEFk 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 213 -------LERLSGDEERIKSvticHTESGQREDIEVDELIINHGFK--ID-LGPMmEWGLEIEE-GRVKADRHMRTNLPG 281
Cdd:PRK06292 226 iklgakvTSVEKSGDEKVEE----LEKGGKTETIEADYVLVATGRRpnTDgLGLE-NTGIELDErGRPVVDEHTQTSVPG 300
|
330 340
....*....|....*....|....*...
gi 639241821 282 VFVAGDA---------AFYESKlrlIAG 300
Cdd:PRK06292 301 IYAAGDVngkppllheAADEGR---IAA 325
|
|
| Ndh |
COG1252 |
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]; |
130-292 |
1.42e-05 |
|
NADH dehydrogenase, FAD-containing subunit [Energy production and conversion];
Pssm-ID: 440864 [Multi-domain] Cd Length: 386 Bit Score: 46.28 E-value: 1.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 130 FDSEDAARYAGKNLHYGVEKLDAFKGKHVVISGGGDTAV-------DWANELEPIA------ASVTVVHRRQEFGGM--E 194
Cdd:COG1252 124 LKTLEDALALRERLLAAFERAERRRLLTIVVVGGGPTGVelagelaELLRKLLRYPgidpdkVRITLVEAGPRILPGlgE 203
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 195 SSVTKMKQS----SVRVLTpyclerlsgdEERIKSVT--ICHTESGQRedIEVDELIINHGFKidlGP--MMEWGLEIEE 266
Cdd:COG1252 204 KLSEAAEKElekrGVEVHT----------GTRVTEVDadGVTLEDGEE--IPADTVIWAAGVK---APplLADLGLPTDR 268
|
170 180
....*....|....*....|....*...
gi 639241821 267 -GRVKADRHMRT-NLPGVFVAGDAAFYE 292
Cdd:COG1252 269 rGRVLVDPTLQVpGHPNVFAIGDCAAVP 296
|
|
| PTZ00058 |
PTZ00058 |
glutathione reductase; Provisional |
19-288 |
6.18e-05 |
|
glutathione reductase; Provisional
Pssm-ID: 185420 [Multi-domain] Cd Length: 561 Bit Score: 44.61 E-value: 6.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 19 GLFTAFYCGMRELKTKVIEFLPKLGGKVSLFFPEKIIRDIGGIPGIAGKQLIEQLKEQAATFDPDIVMNQRVTGFERLDD 98
Cdd:PTZ00058 114 GFDTQFSFNLPLLVERRDKYIRRLNDIYRQNLKKDNVEYFEGKGSLLSENQVLIKKVSQVDGEADESDDDEVTIVSAGVS 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 99 GIivltgSEGEKHYTRTVILACGmgtlevNEFDSEDAaryagKNLHYGVEKLDAFK---GKHVVISGGGDTAVDWANELE 175
Cdd:PTZ00058 194 QL-----DDGQVIEGKNILIAVG------NKPIFPDV-----KGKEFTISSDDFFKikeAKRIGIAGSGYIAVELINVVN 257
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 176 PIAASVTVVHRRQE-FGGMESSVT-----KMKQSSVRVLTPYCLERLSGDEEriKSVTICHTESGQreDIEVDELIINHG 249
Cdd:PTZ00058 258 RLGAESYIFARGNRlLRKFDETIInelenDMKKNNINIITHANVEEIEKVKE--KNLTIYLSDGRK--YEHFDYVIYCVG 333
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 639241821 250 FKIDLGPMMEWGLEI--EEGRVKADRHMRTNLPGVFVAGDA 288
Cdd:PTZ00058 334 RSPNTEDLNLKALNIktPKGYIKVDDNQRTSVKHIYAVGDC 374
|
|
| PRK07846 |
PRK07846 |
mycothione reductase; Reviewed |
156-288 |
9.05e-05 |
|
mycothione reductase; Reviewed
Pssm-ID: 181142 [Multi-domain] Cd Length: 451 Bit Score: 43.79 E-value: 9.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 156 KHVVISGGGDTAVDWANELEPIAASVTVVHR-----RQEFGGMESSVTKMKQSSVRVLtpyCLERLSGDEERIKSVTIcH 230
Cdd:PRK07846 167 ESLVIVGGGFIAAEFAHVFSALGVRVTVVNRsgrllRHLDDDISERFTELASKRWDVR---LGRNVVGVSQDGSGVTL-R 242
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 639241821 231 TESGqrEDIEVDELI-----INHGFKIDLGPMmewGLEI-EEGRVKADRHMRTNLPGVFVAGDA 288
Cdd:PRK07846 243 LDDG--STVEADVLLvatgrVPNGDLLDAAAA---GVDVdEDGRVVVDEYQRTSAEGVFALGDV 301
|
|
| Amino_oxidase |
pfam01593 |
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, ... |
68-288 |
3.16e-04 |
|
Flavin containing amine oxidoreductase; This family consists of various amine oxidases, including maze polyamine oxidase (PAO)and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. The family also contains phytoene dehydrogenases and related enzymes. In vertebrates MAO plays an important role regulating the intracellular levels of amines via there oxidation; these include various neurotransmitters, neurotoxins and trace amines. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium. PAOs in plants, bacteria and protozoa oxidase spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.
Pssm-ID: 396255 [Multi-domain] Cd Length: 446 Bit Score: 42.09 E-value: 3.16e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 68 QLIEQLKEQAAtfDPDIVMNQRVTGFERLDDGIIVLTGSEGEKHYtRTVILACGMGTLEVNEFD---SEDAARYAgKNLH 144
Cdd:pfam01593 207 ALPDALAAQLL--GGDVRLNTRVRSIDREGDGVTVTLTDGEVIEA-DAVIVTVPLGVLKRILFTpplPPEKARAI-RNLG 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 145 YG-VEKL-DAFKGKHVVISGGGDTAVDWANELEPIAASVTVVHRRQEFGGMESSVTKMKQSSVRVLTPYclerlsGDEER 222
Cdd:pfam01593 283 YGpVNKVhLEFDRKFWPDLGLLGLLSELLTGLGTAFSWLTFPNRAPPGKGLLLLVYVGPGDRARELEGL------SDEEL 356
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 639241821 223 IKSVTICHTESGQREDIEvDELIINHGFKIDLGPMMEWGLEIE-EGRVKADRHMRTNLPGVFVAGDA 288
Cdd:pfam01593 357 LQAVLRDLRKLFGEEAPE-PLRVLVSDWHTDPWPRGSYSLPQYgPGHDDYRPLARTPDPGLFFAGEH 422
|
|
| PRK06327 |
PRK06327 |
dihydrolipoamide dehydrogenase; Validated |
224-287 |
4.32e-04 |
|
dihydrolipoamide dehydrogenase; Validated
Pssm-ID: 235779 [Multi-domain] Cd Length: 475 Bit Score: 41.83 E-value: 4.32e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 639241821 224 KSVTICHTES-GQREDIEVDELIINHGFK---IDLGPMmEWGLEIEE-GRVKADRHMRTNLPGVFVAGD 287
Cdd:PRK06327 255 KGVSVAYTDAdGEAQTLEVDKLIVSIGRVpntDGLGLE-AVGLKLDErGFIPVDDHCRTNVPNVYAIGD 322
|
|
| trypano_reduc |
TIGR01423 |
trypanothione-disulfide reductase; Trypanothione, a glutathione-modified derivative of ... |
156-317 |
5.20e-04 |
|
trypanothione-disulfide reductase; Trypanothione, a glutathione-modified derivative of spermidine, is (in its reduced form) an important antioxidant found in trypanosomatids (Crithidia, Leishmania, Trypanosoma). This model describes trypanothione reductase, a possible antitrypanosomal drug target closely related to some forms of glutathione reductase.
Pssm-ID: 200098 [Multi-domain] Cd Length: 486 Bit Score: 41.50 E-value: 5.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 156 KHVVISGGGDTAVDWA---NELEPIAASVTVVHRRQE-FGGMESSVTK-----MKQSSVRVLTPYCLERLSGDEERIKSV 226
Cdd:TIGR01423 188 RRVLTVGGGFISVEFAgifNAYKPRGGKVTLCYRNNMiLRGFDSTLRKeltkqLRANGINIMTNENPAKVTLNADGSKHV 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 227 TIchtESGQREDIEVDELIINHGFKIDLGPMMEWGLEI-EEGRVKADRHMRTNLPGVFVAGDaafyesklrlIAGGFTEG 305
Cdd:TIGR01423 268 TF---ESGKTLDVDVVMMAIGRVPRTQTLQLDKVGVELtKKGAIQVDEFSRTNVPNIYAIGD----------VTDRVMLT 334
|
170
....*....|..
gi 639241821 306 PTAVNSAKAYLD 317
Cdd:TIGR01423 335 PVAINEGAAFVD 346
|
|
| COG2509 |
COG2509 |
FAD-dependent dehydrogenase [General function prediction only]; |
8-121 |
3.90e-03 |
|
FAD-dependent dehydrogenase [General function prediction only];
Pssm-ID: 441999 [Multi-domain] Cd Length: 466 Bit Score: 38.94 E-value: 3.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 8 YDVTIIGGGPIGLFTAFYCGMRELKTKVIE-------------------------------------------FLPK--- 41
Cdd:COG2509 31 YDVVIVGAGPAGLFAALELAEAGLKPLVLErgkdveertcpvaefwrkgkcnpesniqfgeggagtfsdgklnTRSKdpq 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 42 -LGGKV-SLF----FPEKIIRD----IG--GIPGIAgKQLIEQLKEQAAtfdpDIVMNQRVTGFERLDDGIIVLTGSEGE 109
Cdd:COG2509 111 gLIRYVlEIFvkfgAPEEILYAakphIGtdKLPKVV-KNIREYIEELGG----EIRFNTRVTDILIEDGRVKGVVTNDGE 185
|
170
....*....|..
gi 639241821 110 KHYTRTVILACG 121
Cdd:COG2509 186 EIEADAVILAPG 197
|
|
| PRK06370 |
PRK06370 |
FAD-containing oxidoreductase; |
156-287 |
4.13e-03 |
|
FAD-containing oxidoreductase;
Pssm-ID: 235787 [Multi-domain] Cd Length: 463 Bit Score: 38.64 E-value: 4.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 156 KHVVISGGGDTAVDWANELEPIAASVTVVHRRQEFGGMESS-VTK-----MKQSSVRVLTPYCLERLSGDEERIksvTIC 229
Cdd:PRK06370 172 EHLVIIGGGYIGLEFAQMFRRFGSEVTVIERGPRLLPREDEdVAAavreiLEREGIDVRLNAECIRVERDGDGI---AVG 248
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 639241821 230 HTESGQREDIEVDELIINHGFKI---DLGPMmEWGLEIEE-GRVKADRHMRTNLPGVFVAGD 287
Cdd:PRK06370 249 LDCNGGAPEITGSHILVAVGRVPntdDLGLE-AAGVETDArGYIKVDDQLRTTNPGIYAAGD 309
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
68-150 |
6.22e-03 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 38.36 E-value: 6.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 68 QLIEQLkeqAATFDPDIVMNQRVTGFERLDDGIIVlTGSEGEKHYTRTVILACGMGTLEVNEFDSEDAARY--AGKNLHY 145
Cdd:COG1231 203 QLPRAL---AAELGDRIRLGAPVTRIRQDGDGVTV-TTDDGGTVRADAVIVTVPPSVLRRIEFDPPLPAAKraAIQRLPY 278
|
....*.
gi 639241821 146 G-VEKL 150
Cdd:COG1231 279 GaAIKV 284
|
|
| PRK06416 |
PRK06416 |
dihydrolipoamide dehydrogenase; Reviewed |
220-300 |
6.72e-03 |
|
dihydrolipoamide dehydrogenase; Reviewed
Pssm-ID: 235798 [Multi-domain] Cd Length: 462 Bit Score: 38.20 E-value: 6.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639241821 220 EERIKSVTIcHTESGQRED-IEVDELII---------NHGFKidlgpmmEWGLEIEEGRVKADRHMRTNLPGVFVAGD-- 287
Cdd:PRK06416 240 EQTDDGVTV-TLEDGGKEEtLEADYVLVavgrrpnteNLGLE-------ELGVKTDRGFIEVDEQLRTNVPNIYAIGDiv 311
|
90 100
....*....|....*....|..
gi 639241821 288 -------AAFYESKL--RLIAG 300
Cdd:PRK06416 312 ggpmlahKASAEGIIaaEAIAG 333
|
|
| PRK08244 |
PRK08244 |
monooxygenase; |
8-41 |
7.52e-03 |
|
monooxygenase;
Pssm-ID: 236199 [Multi-domain] Cd Length: 493 Bit Score: 37.80 E-value: 7.52e-03
10 20 30
....*....|....*....|....*....|....
gi 639241821 8 YDVTIIGGGPIGLFTAFYCGMRELKTKVIEFLPK 41
Cdd:PRK08244 3 YEVIIIGGGPVGLMLASELALAGVKTCVIERLKE 36
|
|
|