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Conserved domains on  [gi|639490374|ref|WP_024661931|]
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MULTISPECIES: 5,6-dimethylbenzimidazole synthase [Pseudomonas]

Protein Classification

nitroreductase family protein( domain architecture ID 104)

nitroreductase family protein may catalyze the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles, requiring NAD(P)H as an electron donor in an obligatory two-electron transfer and using FMN as cofactor

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Nitro_FMN_reductase super family cl00514
nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or ...
6-208 3.78e-79

nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are described as NAD(P)H:FMN oxidoreductases, oxygen-insensitive nitroreductase, flavin reductase P, dihydropteridine reductase, NADH oxidase or NADH dehydrogenase.


The actual alignment was detected with superfamily member TIGR02476:

Pssm-ID: 444950  Cd Length: 205  Bit Score: 235.41  E-value: 3.78e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374    6 FSPEERAAVYRAIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMQAQVEEERVRTAEAL 85
Cdd:TIGR02476   1 FSDAERAAVYRLIRERRDVRHFRSDPVPEAVLERLLDAAHHAPSVGFSQPWRFVRVESPATREAVHALFTRANQAAAAIY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374   86 -GERTDEFMKLKVEGINDCAEVLVAALMEGR-EQHIFGRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLFDPEALA 163
Cdd:TIGR02476  81 dGERASQYHRLKLEGIREAPVQLAVFCDDARgEGHGLGRHTMPEMLRYSVACAIQNLWLAARAEGLGVGWVSILDPDAVR 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 639490374  164 ELLGMPDGAKPLAIICLGPVKEFYPAPMLVMEGWAQARPLHELLY 208
Cdd:TIGR02476 161 RLLGVPEGWRLVAYLCLGWPDAFYDEPELERAGWQERRPLEWRRY 205
 
Name Accession Description Interval E-value
BluB TIGR02476
5,6-dimethylbenzimidazole synthase; A previously published hypothesis that BluB, involved in ...
6-208 3.78e-79

5,6-dimethylbenzimidazole synthase; A previously published hypothesis that BluB, involved in cobalamin biosynthesis, is EC 1.16.8.1 (cob(II)yrinic acid a,c-diamide reductase) is now contradicted by newer work ascribing a role in 5,6-dimethylbenzimidazole (DMB) biosynthesis. The BluB protein is related to the nitroreductase family (pfam0881). [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 162875  Cd Length: 205  Bit Score: 235.41  E-value: 3.78e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374    6 FSPEERAAVYRAIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMQAQVEEERVRTAEAL 85
Cdd:TIGR02476   1 FSDAERAAVYRLIRERRDVRHFRSDPVPEAVLERLLDAAHHAPSVGFSQPWRFVRVESPATREAVHALFTRANQAAAAIY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374   86 -GERTDEFMKLKVEGINDCAEVLVAALMEGR-EQHIFGRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLFDPEALA 163
Cdd:TIGR02476  81 dGERASQYHRLKLEGIREAPVQLAVFCDDARgEGHGLGRHTMPEMLRYSVACAIQNLWLAARAEGLGVGWVSILDPDAVR 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 639490374  164 ELLGMPDGAKPLAIICLGPVKEFYPAPMLVMEGWAQARPLHELLY 208
Cdd:TIGR02476 161 RLLGVPEGWRLVAYLCLGWPDAFYDEPELERAGWQERRPLEWRRY 205
BluB cd02145
5,6-dimethylbenzimidazole synthase; BluB catalyzes the O2-dependent conversion of FMNH2 to 5, ...
15-206 2.88e-71

5,6-dimethylbenzimidazole synthase; BluB catalyzes the O2-dependent conversion of FMNH2 to 5,6-dimethylbenzimidazole (DMB), a component of vitamin B12; is is a subfamily of the nitroreductase family; nitroreductases typically reduce their substrates by using NAD(P)H as electron donor and often use FMN as a cofactor.


Pssm-ID: 380321  Cd Length: 196  Bit Score: 215.30  E-value: 2.88e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  15 YRAIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMQAQVEEERVRTAEAL-GERTDEFM 93
Cdd:cd02145    1 YRVIRWRRDVRHFRPDPVPEEVLERLLQAAHLAPSVGLMQPWRFVRVRSAATRKAVHELFQRANAEAAEMYtGERAAQYR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  94 KLKVEGINDCAEVLVAALMEGREQ-HIFGRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLFDPEALAELLGMPDGA 172
Cdd:cd02145   81 TLKLEGIEEAPLQLAVFCDRARAGgHGLGRTTMPEMDLYSSVCAVQNLWLAARAEGLGVGWVSILDPDEVKRLLGIPEHW 160
                        170       180       190
                 ....*....|....*....|....*....|....
gi 639490374 173 KPLAIICLGPVKEFYPAPMLVMEGWAQARPLHEL 206
Cdd:cd02145  161 EPVAYLCIGYPEFFYDEPELEQAGWEQRRPLEWV 194
NfnB COG0778
Nitroreductase [Energy production and conversion]; Nitroreductase is part of the Pathway ...
14-190 5.46e-41

Nitroreductase [Energy production and conversion]; Nitroreductase is part of the Pathway/BioSystem: Pyrimidine degradation


Pssm-ID: 440541 [Multi-domain]  Cd Length: 163  Bit Score: 136.91  E-value: 5.46e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  14 VYRAIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMqaqveeervrtAEALGERTDEFM 93
Cdd:COG0778    1 LLELLLTRRSVRKFTDKPVSDEELEELLEAARLAPSAGNLQPWRFVVVRDPELRERL-----------AEALAEANQEWV 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  94 KlkveginDCAEVLVAALMEGReqhifGRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLFDPEALAELLGMPDGAK 173
Cdd:COG0778   70 A-------DAPVLIVVCADPDR-----SEKVPERYALLDAGIAAQNLLLAARALGLGTCWIGGFDPEKVRELLGLPEGEE 137
                        170
                 ....*....|....*...
gi 639490374 174 PLAIICLG-PVKEFYPAP 190
Cdd:COG0778  138 PVALLALGyPAEELNPRP 155
Nitroreductase pfam00881
Nitroreductase family; The nitroreductase family comprises a group of FMN- or FAD-dependent ...
18-181 8.68e-31

Nitroreductase family; The nitroreductase family comprises a group of FMN- or FAD-dependent and NAD(P)H-dependent enzymes able to metabolize nitrosubstituted compounds.


Pssm-ID: 425926 [Multi-domain]  Cd Length: 168  Bit Score: 110.94  E-value: 8.68e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374   18 IAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMQA----QVEEERVRTAEALGERTDEFM 93
Cdd:pfam00881   1 IRQRRSVRKFDPEPVPKEVLEEILEAARRAPSAGNLQPWRFYVVTDGELRYRLAEaaleLLLVEPAAALLLLLRRDANLK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374   94 KLKVEGINDCAEVLVAALMEGReQHIFGRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLFDPEALAELLGMPDGAK 173
Cdd:pfam00881  81 LLLQDFLRGAPVLIVITASLST-YLRKAAERAYREALLDAGAAAQNLLLAATSLGLGSCPIGGFDAAAVRELLGLPDDER 159

                  ....*...
gi 639490374  174 PLAIICLG 181
Cdd:pfam00881 160 LVGLIAVG 167
PRK13294 PRK13294
F420-0--gamma-glutamyl ligase; Provisional
2-189 4.35e-13

F420-0--gamma-glutamyl ligase; Provisional


Pssm-ID: 183957 [Multi-domain]  Cd Length: 448  Bit Score: 67.35  E-value: 4.35e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374   2 TEQAFSPEERAAVYRaiaeRRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMQaqveeERVRT 81
Cdd:PRK13294 245 TAEALELGRREAVLL----RRSVREFSDDPVDPEAVRRAVAAALTAPAPHHTRPVRFVWLRSAAVRTRLL-----DAMRD 315
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  82 AEALGERTDEFMKLKVEG-------INDCAEVLVAAL-MEGREQHIFGRRTLPEMDM--ASLSCAIQNLWLASRAEGLGM 151
Cdd:PRK13294 316 AWRADLRADGLSEESIARrvrrgdiLYDAPELVVPFLvPDGAHSYPDARRTAAERTMftVAVGAAVQNLLVALAVEGLGS 395
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 639490374 152 GWVS--LFDPEALAELLGMPDGAKPLAIICLGpvkefYPA 189
Cdd:PRK13294 396 CWIGstIFAADVVRAVLDLPADWEPLGAVAIG-----HPA 430
 
Name Accession Description Interval E-value
BluB TIGR02476
5,6-dimethylbenzimidazole synthase; A previously published hypothesis that BluB, involved in ...
6-208 3.78e-79

5,6-dimethylbenzimidazole synthase; A previously published hypothesis that BluB, involved in cobalamin biosynthesis, is EC 1.16.8.1 (cob(II)yrinic acid a,c-diamide reductase) is now contradicted by newer work ascribing a role in 5,6-dimethylbenzimidazole (DMB) biosynthesis. The BluB protein is related to the nitroreductase family (pfam0881). [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]


Pssm-ID: 162875  Cd Length: 205  Bit Score: 235.41  E-value: 3.78e-79
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374    6 FSPEERAAVYRAIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMQAQVEEERVRTAEAL 85
Cdd:TIGR02476   1 FSDAERAAVYRLIRERRDVRHFRSDPVPEAVLERLLDAAHHAPSVGFSQPWRFVRVESPATREAVHALFTRANQAAAAIY 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374   86 -GERTDEFMKLKVEGINDCAEVLVAALMEGR-EQHIFGRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLFDPEALA 163
Cdd:TIGR02476  81 dGERASQYHRLKLEGIREAPVQLAVFCDDARgEGHGLGRHTMPEMLRYSVACAIQNLWLAARAEGLGVGWVSILDPDAVR 160
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 639490374  164 ELLGMPDGAKPLAIICLGPVKEFYPAPMLVMEGWAQARPLHELLY 208
Cdd:TIGR02476 161 RLLGVPEGWRLVAYLCLGWPDAFYDEPELERAGWQERRPLEWRRY 205
BluB cd02145
5,6-dimethylbenzimidazole synthase; BluB catalyzes the O2-dependent conversion of FMNH2 to 5, ...
15-206 2.88e-71

5,6-dimethylbenzimidazole synthase; BluB catalyzes the O2-dependent conversion of FMNH2 to 5,6-dimethylbenzimidazole (DMB), a component of vitamin B12; is is a subfamily of the nitroreductase family; nitroreductases typically reduce their substrates by using NAD(P)H as electron donor and often use FMN as a cofactor.


Pssm-ID: 380321  Cd Length: 196  Bit Score: 215.30  E-value: 2.88e-71
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  15 YRAIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMQAQVEEERVRTAEAL-GERTDEFM 93
Cdd:cd02145    1 YRVIRWRRDVRHFRPDPVPEEVLERLLQAAHLAPSVGLMQPWRFVRVRSAATRKAVHELFQRANAEAAEMYtGERAAQYR 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  94 KLKVEGINDCAEVLVAALMEGREQ-HIFGRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLFDPEALAELLGMPDGA 172
Cdd:cd02145   81 TLKLEGIEEAPLQLAVFCDRARAGgHGLGRTTMPEMDLYSSVCAVQNLWLAARAEGLGVGWVSILDPDEVKRLLGIPEHW 160
                        170       180       190
                 ....*....|....*....|....*....|....
gi 639490374 173 KPLAIICLGPVKEFYPAPMLVMEGWAQARPLHEL 206
Cdd:cd02145  161 EPVAYLCIGYPEFFYDEPELEQAGWEQRRPLEWV 194
NfnB COG0778
Nitroreductase [Energy production and conversion]; Nitroreductase is part of the Pathway ...
14-190 5.46e-41

Nitroreductase [Energy production and conversion]; Nitroreductase is part of the Pathway/BioSystem: Pyrimidine degradation


Pssm-ID: 440541 [Multi-domain]  Cd Length: 163  Bit Score: 136.91  E-value: 5.46e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  14 VYRAIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMqaqveeervrtAEALGERTDEFM 93
Cdd:COG0778    1 LLELLLTRRSVRKFTDKPVSDEELEELLEAARLAPSAGNLQPWRFVVVRDPELRERL-----------AEALAEANQEWV 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  94 KlkveginDCAEVLVAALMEGReqhifGRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLFDPEALAELLGMPDGAK 173
Cdd:COG0778   70 A-------DAPVLIVVCADPDR-----SEKVPERYALLDAGIAAQNLLLAARALGLGTCWIGGFDPEKVRELLGLPEGEE 137
                        170
                 ....*....|....*...
gi 639490374 174 PLAIICLG-PVKEFYPAP 190
Cdd:COG0778  138 PVALLALGyPAEELNPRP 155
Nitroreductase pfam00881
Nitroreductase family; The nitroreductase family comprises a group of FMN- or FAD-dependent ...
18-181 8.68e-31

Nitroreductase family; The nitroreductase family comprises a group of FMN- or FAD-dependent and NAD(P)H-dependent enzymes able to metabolize nitrosubstituted compounds.


Pssm-ID: 425926 [Multi-domain]  Cd Length: 168  Bit Score: 110.94  E-value: 8.68e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374   18 IAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMQA----QVEEERVRTAEALGERTDEFM 93
Cdd:pfam00881   1 IRQRRSVRKFDPEPVPKEVLEEILEAARRAPSAGNLQPWRFYVVTDGELRYRLAEaaleLLLVEPAAALLLLLRRDANLK 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374   94 KLKVEGINDCAEVLVAALMEGReQHIFGRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLFDPEALAELLGMPDGAK 173
Cdd:pfam00881  81 LLLQDFLRGAPVLIVITASLST-YLRKAAERAYREALLDAGAAAQNLLLAATSLGLGSCPIGGFDAAAVRELLGLPDDER 159

                  ....*...
gi 639490374  174 PLAIICLG 181
Cdd:pfam00881 160 LVGLIAVG 167
Nitro_FMN_reductase cd02062
nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or ...
18-181 8.80e-24

nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are described as NAD(P)H:FMN oxidoreductases, oxygen-insensitive nitroreductase, flavin reductase P, dihydropteridine reductase, NADH oxidase or NADH dehydrogenase.


Pssm-ID: 380311 [Multi-domain]  Cd Length: 139  Bit Score: 91.97  E-value: 8.80e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  18 IAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPllrgrmqaqveeERVRTAEALGERTDEFMKlkv 97
Cdd:cd02062    1 IKTRRSIRKFTDKPVPEEKLRKILEAARLAPSAGNLQPWRFIVVRDR------------EKKEKLAKLAAPNQKFIA--- 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  98 egindCAEVLVAALMEgreqhifgRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLFD--PEALAELLGMPDGAKPL 175
Cdd:cd02062   66 -----GAPVVIVVVAD--------PDKSRPWALEDAGAAAQNLLLAAAALGLGSCWIGGFDfrEDKVRELLGIPENLRPV 132

                 ....*.
gi 639490374 176 AIICLG 181
Cdd:cd02062  133 ALIAIG 138
YdjA-like cd02135
nitroreductase family protein similar to Escherichia coli YdjA; A subfamily of the ...
17-181 5.00e-23

nitroreductase family protein similar to Escherichia coli YdjA; A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to nitroreductase YdjA from Escherichia coli. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer. Members of this family are also called NADH dehydrogenase, oxygen-insensitive NAD(P)H nitrogenase or dihydropteridine reductase.


Pssm-ID: 380312 [Multi-domain]  Cd Length: 162  Bit Score: 90.74  E-value: 5.00e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  17 AIAERRDMRHFI-GGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDP----LLRGRMQAQVEEERVRTAEALGERTDE 91
Cdd:cd02135    3 LIKTRRSIRKFKlTGAPPEEQLEELLEAAMWAPNHGKLEPWRFIVVTGEgrerLAELLAAAAAARAPGADPEKLEKAREK 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  92 FMKlkvegindcAEVLVAALMEGREQHifgrrTLPEM-DMASLSCAIQNLWLASRAEGLGMGWVS---LFDPEaLAELLG 167
Cdd:cd02135   83 ALR---------APVVIAVVAKPDEDP-----KVPEWeQYAAVGAAVQNLLLAAHALGLGAVWRTgpvTYDPA-VREALG 147
                        170
                 ....*....|....
gi 639490374 168 MPDGAKPLAIICLG 181
Cdd:cd02135  148 LPEDERIVGFLYLG 161
nitroreductase cd02139
nitroreductase family protein; A subfamily of the nitroreductase family containing ...
14-189 2.40e-21

nitroreductase family protein; A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.


Pssm-ID: 380316 [Multi-domain]  Cd Length: 165  Bit Score: 86.37  E-value: 2.40e-21
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  14 VYRAIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMQaqveeERVRTAEALGErtdefm 93
Cdd:cd02139    1 VYEAIKKRRSIRKYKPTPVEEEKLLRILEAARLAPSAKNRQPWRFIVVKDKELKEKLA-----EAANGQKFIAE------ 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  94 klkvegindcAEVLVAALMEGREqhiFGRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLFDPEALAELLGMPDGAK 173
Cdd:cd02139   70 ----------APVVIVACADPSE---SGMGCGKPYYLVDVAIAMEHLVLAATEEGLGTCWIGAFDEDKVKEILGIPEEYR 136
                        170
                 ....*....|....*.
gi 639490374 174 PLAIICLGpvkefYPA 189
Cdd:cd02139  137 VVALTPLG-----YPA 147
nitroreductase cd20608
nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or ...
17-181 2.01e-19

nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are described as NAD(P)H:FMN oxidoreductases, oxygen-insensitive nitroreductase, flavin reductase P, dihydropteridine reductase, NADH oxidase or NADH dehydrogenase.


Pssm-ID: 380329 [Multi-domain]  Cd Length: 145  Bit Score: 80.84  E-value: 2.01e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  17 AIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPllrgrmqaqveeervRTAEALGERTDEFMKLK 96
Cdd:cd20608    3 AIKTRRSVRRFSDKPVEEEKLEKILEAARLAPSWANKQCWRFIVVTDK---------------ETLSELAKKESPSNGWL 67
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  97 VEG---INDCAEVLVAALMEGREQHIFgrrtlpemdmaSLSCAIQNLWLASRAEGLGMGWVSLFDPEALAELLGMPDGAK 173
Cdd:cd20608   68 KDApviIVVCADPKDSGWLNGQNYYLV-----------DAAIAMQNLMLAATDLGLGTCWIGAFDEKKVKEILGIPENIR 136

                 ....*...
gi 639490374 174 PLAIICLG 181
Cdd:cd20608  137 VVALTPLG 144
nitroreductase cd20610
nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or ...
18-181 2.18e-15

nitroreductase family protein; Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Enzymes of this family are described as NAD(P)H:FMN oxidoreductases, oxygen-insensitive nitroreductase, flavin reductase P, dihydropteridine reductase, NADH oxidase or NADH dehydrogenase.


Pssm-ID: 380331 [Multi-domain]  Cd Length: 167  Bit Score: 70.77  E-value: 2.18e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  18 IAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDpllrGRMQAQVEEERVRTAEALGERTDEFMKLKV 97
Cdd:cd20610    1 IKKRRSIRKFKPDPVPKEDIEKILEAANWAPSGMNRQNWEFVVVKG----GEKIEKIGISIKKKNEEIARLLEKVFAEKP 76
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  98 EGI---------NDCAEVLVAALMEgREQHIFGRRTlpemDMASLSCAIQNLWLASRAEGLGMGWVS--LFDPEALAELL 166
Cdd:cd20610   77 IRFrkfrrfftlFGGAPVLVVVYTE-PYKPPEERKP----DLQSVSAAIQNLLLAAHALGLGTCWMTgpLYAEDEIEEIL 151
                        170
                 ....*....|....*
gi 639490374 167 GMPDGAKPLAIICLG 181
Cdd:cd20610  152 EIPDDKELVAVTPLG 166
PnbA_NfnB-like cd02136
nitroreductase similar to Mycobacterium smegmatis NfnB; Members of this family utilize FMN as ...
17-190 4.00e-15

nitroreductase similar to Mycobacterium smegmatis NfnB; Members of this family utilize FMN as a cofactor and catalyze reduction of a variety of nitroaromatic compounds, including nitrofurans, nitrobenzens, nitrophenol, nitrobenzoate and quinones by using either NADH or NADPH as a source of reducing equivalents in an obligatory two-election transfer mechanism. The enzyme is typically a homodimer. Mycobacterium smegmatis nitroreductase NfnB plays a role in resistance to benzothiazinone.


Pssm-ID: 380313 [Multi-domain]  Cd Length: 152  Bit Score: 69.54  E-value: 4.00e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  17 AIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLrgrmqaqveeERVRTAealgertdEFMklk 96
Cdd:cd02136    1 AIKSRRSVRAFKDKPVPKETIEKILEAARRAPSGKNTQPWRVYVVTGKAR----------ERLKKA--------FFG--- 59
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  97 vegindcAEVLVAalmegreqhIFGRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLF--DPEALAELLGMPDGAKP 174
Cdd:cd02136   60 -------APVALF---------LTMDKVLGPWSWFDLGAFLQNLMLAAHALGLGTCPQGALagYPDVVRKELGIPDDEEL 123
                        170
                 ....*....|....*.
gi 639490374 175 LAIICLGpvkefYPAP 190
Cdd:cd02136  124 VCGIALG-----YPDP 134
nitroreductase cd20609
nitroreductase family protein; A subfamily of the nitroreductase family containing ...
18-181 7.91e-15

nitroreductase family protein; A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.often found to be homodimers.


Pssm-ID: 380330 [Multi-domain]  Cd Length: 145  Bit Score: 68.57  E-value: 7.91e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  18 IAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIrisdpllrgrmqaqVeeerVRTAEALgertdefmklkv 97
Cdd:cd20609    6 AKKRYSVRKFSDKPVEKEKLDKILEAGRLAPTAVNYQPQRIL--------------V----VRSEEAL------------ 55
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  98 EGINDCAE--------VLVAALMEGREQHIFGRRTLPEMDmasLSCAIQNLWLASRAEGLGMGWVSLFDPEALAELLGMP 169
Cdd:cd20609   56 EKLAKATPrffgaplvIVVCYDKDESWKRPYDGKDSGDID---AAIVATHMMLAATELGLGTCWVGNFDPEKVREAFNLP 132
                        170
                 ....*....|..
gi 639490374 170 DGAKPLAIICLG 181
Cdd:cd20609  133 ENLEPVAILPLG 144
nitroreductase cd02150
nitroreductase family protein; A subfamily of the nitroreductase family containing ...
18-189 2.21e-14

nitroreductase family protein; A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.often found to be homodimers.


Pssm-ID: 380325 [Multi-domain]  Cd Length: 156  Bit Score: 67.63  E-value: 2.21e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  18 IAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMqaqveeervrtAEALgertdEFMKLkv 97
Cdd:cd02150    1 ILTRRSIRKYTDKPVEEEDIEKLLRAAMAAPSAGNQQPWHFIVVTDREKLDKI-----------AEAH-----PYGKM-- 62
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  98 egindCAEVLVAALMEGREQhifgRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLF----DPEALAELLGMPDGAK 173
Cdd:cd02150   63 -----LKEAPLAIVVCGDPS----KEKAPGYWVQDCSAATENILLAAHALGLGAVWLGVYpfeeRVKAIREILNIPENII 133
                        170
                 ....*....|....*.
gi 639490374 174 PLAIICLGpvkefYPA 189
Cdd:cd02150  134 PFCVIALG-----YPA 144
NfsA-like cd02146
nitroreductase similar to Escherichia coli NfsA; This family contains NADPH-dependent flavin ...
21-212 2.33e-13

nitroreductase similar to Escherichia coli NfsA; This family contains NADPH-dependent flavin reductase and oxygen-insensitive nitroreductase. These enzymes are homodimeric flavoproteins that contain one FMN per monomer as a cofactor. Flavin reductase catalyzes the reduction of flavin by using NADPH as an electron donor. Oxygen-insensitive nitroreductase, such as NfsA protein in Escherichia coli, catalyzes reduction of nitrocompounds using NADPH as electron donor.


Pssm-ID: 380322 [Multi-domain]  Cd Length: 229  Bit Score: 66.49  E-value: 2.33e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  21 RRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGR------MQAQVEEERV---------RTAEAL 85
Cdd:cd02146    8 HRSVRKFTDEPLTDETLETLIAAAQSASTSSNLQAYSVIVVTDPELREKlaelagNQPYVAQAPVflvfcadlyRHQKIA 87
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  86 GERtdefmKLKVEGINDCAEVLVAAlmegreqhifgrrtlpeMDmASLscAIQNLWLAsrAEGLGMGWVSL----FDPEA 161
Cdd:cd02146   88 EEA-----GGKDVGLDYLESFLVGV-----------------VD-AAL--AAQNALVA--AESLGLGIVYIggirNNPEE 140
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....
gi 639490374 162 LAELLGMPDGAKPLAIICLGpvkefYPAPMlvmegwAQARP---LHELLYENQW 212
Cdd:cd02146  141 VIELLGLPEYVFPLFGLTVG-----HPDPT------PEVKPrlpLEAVVHEETY 183
PRK13294 PRK13294
F420-0--gamma-glutamyl ligase; Provisional
2-189 4.35e-13

F420-0--gamma-glutamyl ligase; Provisional


Pssm-ID: 183957 [Multi-domain]  Cd Length: 448  Bit Score: 67.35  E-value: 4.35e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374   2 TEQAFSPEERAAVYRaiaeRRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMQaqveeERVRT 81
Cdd:PRK13294 245 TAEALELGRREAVLL----RRSVREFSDDPVDPEAVRRAVAAALTAPAPHHTRPVRFVWLRSAAVRTRLL-----DAMRD 315
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  82 AEALGERTDEFMKLKVEG-------INDCAEVLVAAL-MEGREQHIFGRRTLPEMDM--ASLSCAIQNLWLASRAEGLGM 151
Cdd:PRK13294 316 AWRADLRADGLSEESIARrvrrgdiLYDAPELVVPFLvPDGAHSYPDARRTAAERTMftVAVGAAVQNLLVALAVEGLGS 395
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|
gi 639490374 152 GWVS--LFDPEALAELLGMPDGAKPLAIICLGpvkefYPA 189
Cdd:PRK13294 396 CWIGstIFAADVVRAVLDLPADWEPLGAVAIG-----HPA 430
MhqN-like cd02137
nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN; A diverse subfamily ...
17-181 2.01e-12

nitroreductase family protein similar to the NAD(P)H nitroreductase MhqN; A diverse subfamily of the nitroreductase family containing uncharacterized proteins; includes nitroreductases MhqN, YodC, YdgI, DrgA. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.


Pssm-ID: 380314 [Multi-domain]  Cd Length: 147  Bit Score: 62.26  E-value: 2.01e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  17 AIAERRDMRHFIGGAVAP-ELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRM------QAQVEeervrTAEALgert 89
Cdd:cd02137    3 VIKSRRSVRNFDPDHKIPkEELKEILELATLAPSSFNLQPWRFVVVRDPELKAKLaeaaynQPQVT-----TASAV---- 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  90 defmklkvegindcaeVLVAALMegreqhifgrrtlpemdmaSLSCAIQNLWLASRAEGLGMGWVSLFDPEALAELLGMP 169
Cdd:cd02137   74 ----------------ILVLGDL-------------------NAGLAAMNLMLAAKAKGYDTCPMGGFDKEKVAELLNLP 118
                        170
                 ....*....|..
gi 639490374 170 DGAKPLAIICLG 181
Cdd:cd02137  119 DRYVPVLLIAIG 130
nitroreductase cd03370
uncharacterized nitroreductase family proteins; Nitroreductase family containing Thermus ...
17-188 5.02e-11

uncharacterized nitroreductase family proteins; Nitroreductase family containing Thermus thermophilus NADH oxidase and other, uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.


Pssm-ID: 380327 [Multi-domain]  Cd Length: 191  Bit Score: 59.25  E-value: 5.02e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  17 AIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRM------QAQVEEERVrtaeALGERTD 90
Cdd:cd03370    4 AIESRRSIRKYTQEPVPDEDLREILRLAGLAPSAWNIQPWRFVVVRDAELKEQLqaaaygQAQVTSAPA----VIVIYSD 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  91 efMKlkvEGINDCAEVLVAALMEGREQHIFG--RRTLPEMDMASLS--------CAIQNLWLASRAEGLGMGWVSLFDPE 160
Cdd:cd03370   80 --ME---DALANLEETIHPGLSEERRQREAAglRGAFGKMSVEQRGqwglaqanIALGFLLLAAQSLGYDTSPMLGFDPE 154
                        170       180
                 ....*....|....*....|....*....
gi 639490374 161 ALAELLGMPDGAKPLAIICLG-PVKEFYP 188
Cdd:cd03370  155 KVKALLGLPEHVTIAALVALGkPAEEGYP 183
TdsD-like cd02138
nitroreductase similar to Burkholderia pseudomallei TdsD; A subfamily of the nitroreductase ...
17-181 3.23e-10

nitroreductase similar to Burkholderia pseudomallei TdsD; A subfamily of the nitroreductase family containing uncharacterized proteins that are similar to Burkholderia pseudomallei TdsD, may be involved in the processing of organosulfur compounds. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.


Pssm-ID: 380315 [Multi-domain]  Cd Length: 174  Bit Score: 56.78  E-value: 3.23e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  17 AIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIrisdpllrgrmqaqveeervrtaeaLGERTDEFMKLK 96
Cdd:cd02138    1 LIAERWSPRAFSPEPISEEDLLSLFEAARWAPSCFNEQPWRFV-------------------------VARRDTEAFEKL 55
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  97 VEGINDC-------AEVLVAAL-MEGREQHIFGRRTlpemdmASLSC--AIQNLWLASRAEGL---GMGwvsLFDPEALA 163
Cdd:cd02138   56 LDLLAEGnqswaknAPVLIVVLaKTEFDHNGKPNRY------ALFDTgaAVANLALQATALGLvvhQMA---GFDPEKAK 126
                        170
                 ....*....|....*...
gi 639490374 164 ELLGMPDGAKPLAIICLG 181
Cdd:cd02138  127 EALGIPDEYEPITMIAIG 144
PRK10765 PRK10765
oxygen-insensitive NADPH nitroreductase;
18-203 4.67e-10

oxygen-insensitive NADPH nitroreductase;


Pssm-ID: 182710  Cd Length: 240  Bit Score: 57.29  E-value: 4.67e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  18 IAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRM------QAQVEEervrtaealgertde 91
Cdd:PRK10765   8 ILSHRSIRHFTDEPISEAQREAIINAARAASSSSFLQCSSIIRITDKALREALveltggQKYVAQ--------------- 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  92 fmklkvegindCAEVLVAALMEGREQHIFgrrtlPE--MDMASLS------CAI--QNLWLAsrAEGLGMGWVSL----F 157
Cdd:PRK10765  73 -----------AAEFWVFCADFNRHLQIC-----PDaqLGLAEQLligavdTAImaQNALLA--AESLGLGGVYIgglrN 134
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|..
gi 639490374 158 DPEALAELLGMPDGAKPLAIICLG------PVKEFYPAPMLVMEGwaQARPL 203
Cdd:PRK10765 135 NIEAVTELLKLPQHVLPLFGLCLGwpaqnpDLKPRLPASLLVHEN--QYQPL 184
iodotyrosine_dehalogenase cd02144
iodotyrosine dehalogenase; Iodotyrosine dehalogenase catalyzes the removal of iodine from the ...
14-190 1.11e-09

iodotyrosine dehalogenase; Iodotyrosine dehalogenase catalyzes the removal of iodine from the 3, 5 positions of L-tyosine in thyroid, liver and kidney, using NADPH as electron donor. This enzyme is a homolog of the nitroreductase family. These enzymes are usually homodimers.


Pssm-ID: 380320  Cd Length: 192  Bit Score: 55.62  E-value: 1.11e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  14 VYRAIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPLLRGRMQAQVE-EERVRTAEALGE--RTD 90
Cdd:cd02144    1 FYELMKKRRSVRDFSSEPVPREVIENAIRTAGTAPSGANTQPWTFVVVSDPEIKRKIREAAEeEEKEFYEKRMGEewVWD 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  91 efmkLKVEGIN------DCAEVLVAalmegreqhIFGRRTLPEMDM-----------ASLSCAIqnLWLASRAEGLgmgw 153
Cdd:cd02144   81 ----LKPLGTNwekpylTEAPYLIV---------VFKQKYGVLPDGkkkkhyyneesVGIAVGI--LLAALHNAGL---- 141
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|.
gi 639490374 154 VSL----FDPEALAELLGMPDGAKPLAIICLGpvkefYPAP 190
Cdd:cd02144  142 VTLthtpSPMPFLRDLLGRPKNEKPLLLLPVG-----YPAE 177
nitroreductase cd02151
nitroreductase family protein; A subfamily of the nitroreductase family containing ...
17-189 3.05e-09

nitroreductase family protein; A subfamily of the nitroreductase family containing uncharacterized proteins. Nitroreductase catalyzes the reduction of nitroaromatic compounds such as nitrotoluenes, nitrofurans and nitroimidazoles. This process requires NAD(P)H as electron donor in an obligatory two-electron transfer and uses FMN as cofactor. The enzyme is typically a homodimer.often found to be homodimers..


Pssm-ID: 380326 [Multi-domain]  Cd Length: 157  Bit Score: 53.69  E-value: 3.05e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  17 AIAERRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPllrgrmqaqveeervRTAEALGErTDEFMKLK 96
Cdd:cd02151    2 LLKKRRSIRKYTDEPIEEEKLEEILEAALLAPSSRNSRPVEFIVVDDK---------------ETLKKLSE-CKPHGSAF 65
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  97 VEGindcAEVLVAalmegreqhIFGRRTLPEMDMASLSCAIQNLWLASRAEGLGMGWVSLFD---------PEALAELLG 167
Cdd:cd02151   66 LKG----APAAIV---------VLADTEKSDTWIEDASIAATYIQLAAESLGLGSCWIQIRNretqdgktaEEYVRELLG 132
                        170       180
                 ....*....|....*....|..
gi 639490374 168 MPDGAKPLAIICLGpvkefYPA 189
Cdd:cd02151  133 IPENYRVLCIIALG-----YPD 149
FbiB_C-like cd20607
nitroreductase family domain similar to the C-terminal domain of F420:gamma-glutamyl ligase ...
54-189 5.83e-09

nitroreductase family domain similar to the C-terminal domain of F420:gamma-glutamyl ligase FbiB; Proteins of this family catalyze the reduction of flavin or nitrocompounds using NAD(P)H as electron donor in a obligatory two-electron transfer, utilizing FMN or FAD as cofactor. They are often found to be homodimers. Mycobacterium tuberculosis FbiB, is a two-domain protein and produces F420 with predominantly 5 to 7 L-glutamate residues in the poly-gamma-glutamate tail, its C-terminal domain is homologous to FMN-dependent nitroreductases.


Pssm-ID: 380328 [Multi-domain]  Cd Length: 155  Bit Score: 53.24  E-value: 5.83e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  54 QPWRFIRISDPLLRGRMQAQVEEERVR-------TAEALGERTDEFMKLKveginDCAEVLVAALM-EGREQHIFGRRTL 125
Cdd:cd20607    5 RPWRFVWLQDPAIRKELLDRMADRWEAdltgdglTPEAIARRVSRGQILY-----DAPEVVIPFLVpDGAHTYPDARRTD 79
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 639490374 126 PEMDMASLS--CAIQNLWLASRAEGLGMGWVS--LFDPEALAELLGMPDGAKPLAIICLGpvkefYPA 189
Cdd:cd20607   80 AEHTMFTVAvgAAVQALLVALAVRGLGSCWIGstIFAPDVVRDELDLPDDWEPLGAIAIG-----YPL 142
nitroreductase_FeS-like cd02143
nitroreductases with an N-terminal iron-sulfur cluster-binding domain; Members of this family ...
21-189 1.41e-07

nitroreductases with an N-terminal iron-sulfur cluster-binding domain; Members of this family utilize FMN as a cofactor. This family may be involved in the reduction of flavin or nitroaromatic compounds via an obligatory two-electron transfer. Nitroreductase is homodimer. Each subunit contains one FMN molecule.


Pssm-ID: 380319 [Multi-domain]  Cd Length: 187  Bit Score: 49.78  E-value: 1.41e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374  21 RRDMRHFIGGAVAPELLARVLEAAHQAPSVGLMQPWRFIRISDPllrgrmqaqveeERVRtaeALGERTDEFMKLKVEGI 100
Cdd:cd02143    5 RRSIRRYKDKPVPRETLEKLLDIARYAPTGHNSQPVHWLVVDDP------------EKVR---RLAELVIDWMRELIKED 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 639490374 101 NDCA-----EVLVAALMEGREqHIFgrRTLP---------EMDMASLSCAI--QNLWLASRAEGLGMGWVSLF------D 158
Cdd:cd02143   70 PELAgklflDGIVAAWEKGID-VIL--RGAPhlvvahapkDAPTPPVDCAIalTYLELAAPSLGLGTCWAGFFtaaannY 146
                        170       180       190
                 ....*....|....*....|....*....|.
gi 639490374 159 PEaLAELLGMPDGAKPLAIICLGpvkefYPA 189
Cdd:cd02143  147 PP-LREALGLPEGHKVGGAMMLG-----YPK 171
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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