|
Name |
Accession |
Description |
Interval |
E-value |
| MenH |
COG0596 |
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ... |
3-266 |
1.83e-45 |
|
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis
Pssm-ID: 440361 [Multi-domain] Cd Length: 221 Bit Score: 152.08 E-value: 1.83e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 3 QFMEIAGRQMAYLDEG-QGPVLLFGHSYLWDSAMWAPQIEALKGQYRCIVPELWGHGDSDAlPEGACTLATLARDHLALL 81
Cdd:COG0596 5 RFVTVDGVRLHYREAGpDGPPVVLLHGLPGSSYEWRPLIPALAAGYRVIAPDLRGHGRSDK-PAGGYTLDDLADDLAALL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 82 DALGIDEFVLVGLSIGGMWGVELARMAPARLKGLVLMDSFVglepqitcERYLGMLAMieqlgtipapiveqvaplffad 161
Cdd:COG0596 84 DALGLERVVLVGHSMGGMVALELAARHPERVAGLVLVDEVL--------AALAEPLRR---------------------- 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 162 qpDADLMSGFKARLAAwpadkvaamvavgrsfVTREDRIEWLEAISVPALVMTGSQDKARPVLEGYLMAEVL-GCPFKEV 240
Cdd:COG0596 134 --PGLAPEALAALLRA----------------LARTDLRERLARITVPTLVIWGEKDPIVPPALARRLAELLpNAELVVL 195
|
250 260
....*....|....*....|....*.
gi 640507330 241 PAAGHIASLENPAFVNDQLGAFLAAL 266
Cdd:COG0596 196 PGAGHFPPLEQPEAFAAALRDFLARL 221
|
|
| protocat_pcaD |
TIGR02427 |
3-oxoadipate enol-lactonase; Members of this family are 3-oxoadipate enol-lactonase. Note that ... |
16-264 |
3.54e-38 |
|
3-oxoadipate enol-lactonase; Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other]
Pssm-ID: 131480 [Multi-domain] Cd Length: 251 Bit Score: 134.41 E-value: 3.54e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 16 DEGQGPVLLFGHSYLWDSAMWAPQIEALKGQYRCIVPELWGHGDSDAlPEGACTLATLARDHLALLDALGIDEFVLVGLS 95
Cdd:TIGR02427 9 AADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDA-PEGPYSIEDLADDVLALLDHLGIERAVFCGLS 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 96 IGGMWGVELARMAPARLKGLVLMDSfvglEPQI-TCERYLGMLAMIEQLGTipAPIVEQVAPLFFAD---QPDADLMSGF 171
Cdd:TIGR02427 88 LGGLIAQGLAARRPDRVRALVLSNT----AAKIgTPESWNARIAAVRAEGL--AALADAVLERWFTPgfrEAHPARLDLY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 172 KARLAAWPADKVAAMVAVGRSFvtreDRIEWLEAISVPALVMTGSQDKARPVLEGYLMAE-VLGCPFKEVPAAGHIASLE 250
Cdd:TIGR02427 162 RNMLVRQPPDGYAGCCAAIRDA----DFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADlVPGARFAEIRGAGHIPCVE 237
|
250
....*....|....
gi 640507330 251 NPAFVNDQLGAFLA 264
Cdd:TIGR02427 238 QPEAFNAALRDFLR 251
|
|
| Abhydrolase_1 |
pfam00561 |
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes. |
21-252 |
4.44e-22 |
|
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
Pssm-ID: 395444 [Multi-domain] Cd Length: 245 Bit Score: 91.80 E-value: 4.44e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 21 PVLLFGHSYLWDSAMWAPQIEAL-KGQYRCIVPELWGHGDSDALPE-GACTLATLARDHLALLDALGIDEFVLVGLSIGG 98
Cdd:pfam00561 1 PPVLLLHGLPGSSDLWRKLAPALaRDGFRVIALDLRGFGKSSRPKAqDDYRTDDLAEDLEYILEALGLEKVNLVGHSMGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 99 MWGVELARMAPARLKGLVLMDSFVGLEPQITCERYLGMLaMIEQLGTIPAPIVEQVAPLFFADQ-----------PDADL 167
Cdd:pfam00561 81 LIALAYAAKYPDRVKALVLLGALDPPHELDEADRFILAL-FPGFFDGFVADFAPNPLGRLVAKLlallllrlrllKALPL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 168 MSGFKARLAAWPADKVAAMVAVGRSFVTREDRIEWLEAISVPALVMTGSQDKARPVLEGYLMAEVLGCPFKEV-PAAGHI 246
Cdd:pfam00561 160 LNKRFPSGDYALAKSLVTGALLFIETWSTELRAKFLGRLDEPTLIIWGDQDPLVPPQALEKLAQLFPNARLVViPDAGHF 239
|
....*.
gi 640507330 247 ASLENP 252
Cdd:pfam00561 240 AFLEGP 245
|
|
| PRK03592 |
PRK03592 |
haloalkane dehalogenase; Provisional |
2-122 |
9.46e-20 |
|
haloalkane dehalogenase; Provisional
Pssm-ID: 235135 Cd Length: 295 Bit Score: 86.20 E-value: 9.46e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 2 KQFMEIAGRQMAYLDEGQGPVLLFGH-----SYLWDSAMwaPQIEalkGQYRCIVPELWGHGDSDAlPEGACTLATLARD 76
Cdd:PRK03592 9 MRRVEVLGSRMAYIETGEGDPIVFLHgnptsSYLWRNII--PHLA---GLGRCLAPDLIGMGASDK-PDIDYTFADHARY 82
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 640507330 77 HLALLDALGIDEFVLVGLSIGGMWGVELARMAPARLKGLVLMDSFV 122
Cdd:PRK03592 83 LDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128
|
|
| Esterase_713 |
cd12807 |
Novel bacterial esterase 713 that cleaves esters on halogenated cyclic compounds; This family ... |
19-194 |
6.11e-03 |
|
Novel bacterial esterase 713 that cleaves esters on halogenated cyclic compounds; This family contains proteins similar to a novel bacterial esterase (esterase 713) with the alpha/beta hydrolase fold that cleaves esters on halogenated cyclic compounds. This Alcaligenes esterase, however, does not contain the GXSXXG pentapeptide around the active site serine residue as seen in other esterase families. This enzyme is active as a dimer though its natural substrate is unknown. It has two distinct disulfide bridges; one formed between adjacent cysteines appears to facilitate the correct formation of the oxyanion cleft in the catalytic site. Esterase 713 also resembles human pancreatic lipase in its location of the acidic residue of the catalytic triad. It is possibly exported from the cytosol to the periplasmic space. A large majority of sequences in this family have yet to be characterized.
Pssm-ID: 214006 Cd Length: 315 Bit Score: 37.30 E-value: 6.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 19 QGPVLLFGHSYLWDSAMWAPQ-----------IEALKGQYRCIVPELwghgdSDALPEGACTLATLArdhlALLDALGid 87
Cdd:cd12807 121 LPAIFRAGDEFAWTNFRFGPTygvpfpdtqfpVEAVAEFYKQVVPDL-----NATLPTPNPTPNALA----ALADKLG-- 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 88 EFVLVGLSIGGMWGVELARMAPARLKGLvlmdsfVGLEPQITCERYlgmLAMIEQLGTIPAPIVeqvaplfFADQPDADL 167
Cdd:cd12807 190 GAVLLGHSQSGPFPLEAALLRPAGVKGI------VSVEPGCCPAPT---ADQIKTLAKIPILVV-------FGDHLDAAS 253
|
170 180
....*....|....*....|....*..
gi 640507330 168 MSGFKARLAAWPADKVAAMVAVGRSFV 194
Cdd:cd12807 254 GPTWQQRLQACQAFVDRINAAGGDAKL 280
|
|
|
|
Name |
Accession |
Description |
Interval |
E-value |
| MenH |
COG0596 |
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, ... |
3-266 |
1.83e-45 |
|
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold [Coenzyme transport and metabolism, General function prediction only]; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold is part of the Pathway/BioSystem: Menaquinone biosynthesis
Pssm-ID: 440361 [Multi-domain] Cd Length: 221 Bit Score: 152.08 E-value: 1.83e-45
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 3 QFMEIAGRQMAYLDEG-QGPVLLFGHSYLWDSAMWAPQIEALKGQYRCIVPELWGHGDSDAlPEGACTLATLARDHLALL 81
Cdd:COG0596 5 RFVTVDGVRLHYREAGpDGPPVVLLHGLPGSSYEWRPLIPALAAGYRVIAPDLRGHGRSDK-PAGGYTLDDLADDLAALL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 82 DALGIDEFVLVGLSIGGMWGVELARMAPARLKGLVLMDSFVglepqitcERYLGMLAMieqlgtipapiveqvaplffad 161
Cdd:COG0596 84 DALGLERVVLVGHSMGGMVALELAARHPERVAGLVLVDEVL--------AALAEPLRR---------------------- 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 162 qpDADLMSGFKARLAAwpadkvaamvavgrsfVTREDRIEWLEAISVPALVMTGSQDKARPVLEGYLMAEVL-GCPFKEV 240
Cdd:COG0596 134 --PGLAPEALAALLRA----------------LARTDLRERLARITVPTLVIWGEKDPIVPPALARRLAELLpNAELVVL 195
|
250 260
....*....|....*....|....*.
gi 640507330 241 PAAGHIASLENPAFVNDQLGAFLAAL 266
Cdd:COG0596 196 PGAGHFPPLEQPEAFAAALRDFLARL 221
|
|
| protocat_pcaD |
TIGR02427 |
3-oxoadipate enol-lactonase; Members of this family are 3-oxoadipate enol-lactonase. Note that ... |
16-264 |
3.54e-38 |
|
3-oxoadipate enol-lactonase; Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate. [Energy metabolism, Other]
Pssm-ID: 131480 [Multi-domain] Cd Length: 251 Bit Score: 134.41 E-value: 3.54e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 16 DEGQGPVLLFGHSYLWDSAMWAPQIEALKGQYRCIVPELWGHGDSDAlPEGACTLATLARDHLALLDALGIDEFVLVGLS 95
Cdd:TIGR02427 9 AADGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDA-PEGPYSIEDLADDVLALLDHLGIERAVFCGLS 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 96 IGGMWGVELARMAPARLKGLVLMDSfvglEPQI-TCERYLGMLAMIEQLGTipAPIVEQVAPLFFAD---QPDADLMSGF 171
Cdd:TIGR02427 88 LGGLIAQGLAARRPDRVRALVLSNT----AAKIgTPESWNARIAAVRAEGL--AALADAVLERWFTPgfrEAHPARLDLY 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 172 KARLAAWPADKVAAMVAVGRSFvtreDRIEWLEAISVPALVMTGSQDKARPVLEGYLMAE-VLGCPFKEVPAAGHIASLE 250
Cdd:TIGR02427 162 RNMLVRQPPDGYAGCCAAIRDA----DFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADlVPGARFAEIRGAGHIPCVE 237
|
250
....*....|....
gi 640507330 251 NPAFVNDQLGAFLA 264
Cdd:TIGR02427 238 QPEAFNAALRDFLR 251
|
|
| Abhydrolase_1 |
pfam00561 |
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes. |
21-252 |
4.44e-22 |
|
alpha/beta hydrolase fold; This catalytic domain is found in a very wide range of enzymes.
Pssm-ID: 395444 [Multi-domain] Cd Length: 245 Bit Score: 91.80 E-value: 4.44e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 21 PVLLFGHSYLWDSAMWAPQIEAL-KGQYRCIVPELWGHGDSDALPE-GACTLATLARDHLALLDALGIDEFVLVGLSIGG 98
Cdd:pfam00561 1 PPVLLLHGLPGSSDLWRKLAPALaRDGFRVIALDLRGFGKSSRPKAqDDYRTDDLAEDLEYILEALGLEKVNLVGHSMGG 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 99 MWGVELARMAPARLKGLVLMDSFVGLEPQITCERYLGMLaMIEQLGTIPAPIVEQVAPLFFADQ-----------PDADL 167
Cdd:pfam00561 81 LIALAYAAKYPDRVKALVLLGALDPPHELDEADRFILAL-FPGFFDGFVADFAPNPLGRLVAKLlallllrlrllKALPL 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 168 MSGFKARLAAWPADKVAAMVAVGRSFVTREDRIEWLEAISVPALVMTGSQDKARPVLEGYLMAEVLGCPFKEV-PAAGHI 246
Cdd:pfam00561 160 LNKRFPSGDYALAKSLVTGALLFIETWSTELRAKFLGRLDEPTLIIWGDQDPLVPPQALEKLAQLFPNARLVViPDAGHF 239
|
....*.
gi 640507330 247 ASLENP 252
Cdd:pfam00561 240 AFLEGP 245
|
|
| menH_SHCHC |
TIGR03695 |
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; This protein catalyzes the ... |
20-263 |
2.41e-21 |
|
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Pssm-ID: 274729 [Multi-domain] Cd Length: 252 Bit Score: 89.97 E-value: 2.41e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 20 GPVLLFGHSYLWDSAMWAPQIEALKGQYRCIVPELWGHGDSDALPEGAC-TLATLARDHLA-LLDALGIDEFVLVGLSIG 97
Cdd:TIGR03695 2 KPVLVFLHGFLGSGADWQALIEALGPHFRCLAIDLPGHGSSQSPSDIERyDFEEAAQLLLAtLLDQLGIEPFFLVGYSMG 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 98 GMWGVELARMAPARLKGLVLMDSFVGLE-PQITCERYL--GMLA-MIEQLGtipapiVEQVA------PLFfADQ---PD 164
Cdd:TIGR03695 82 GRIALYYALQYPERVQGLILESGSPGLQtEEERAARRQndEQLAqRFEQEG------LEAFLddwyqqPLF-ASQknlPP 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 165 ADLMSGFKARLAAWPAdKVAAM-----VAVGRSFvtredrIEWLEAISVPALVMTGSQDKARPVLEGYLMAEVLGCPFKE 239
Cdd:TIGR03695 155 EQRQALRAERLANNPE-GLAKMlratgLGKQPSL------WPKLQALKIPVLYLCGERDEKFVQIAKEMQKLIPNLTLHI 227
|
250 260
....*....|....*....|....
gi 640507330 240 VPAAGHIASLENPAFVNDQLGAFL 263
Cdd:TIGR03695 228 IPNAGHNIHLENPEAFAKILLAFL 251
|
|
| PRK03592 |
PRK03592 |
haloalkane dehalogenase; Provisional |
2-122 |
9.46e-20 |
|
haloalkane dehalogenase; Provisional
Pssm-ID: 235135 Cd Length: 295 Bit Score: 86.20 E-value: 9.46e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 2 KQFMEIAGRQMAYLDEGQGPVLLFGH-----SYLWDSAMwaPQIEalkGQYRCIVPELWGHGDSDAlPEGACTLATLARD 76
Cdd:PRK03592 9 MRRVEVLGSRMAYIETGEGDPIVFLHgnptsSYLWRNII--PHLA---GLGRCLAPDLIGMGASDK-PDIDYTFADHARY 82
|
90 100 110 120
....*....|....*....|....*....|....*....|....*.
gi 640507330 77 HLALLDALGIDEFVLVGLSIGGMWGVELARMAPARLKGLVLMDSFV 122
Cdd:PRK03592 83 LDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIV 128
|
|
| PRK14875 |
PRK14875 |
acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional |
3-265 |
3.31e-18 |
|
acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Pssm-ID: 184875 [Multi-domain] Cd Length: 371 Bit Score: 83.07 E-value: 3.31e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 3 QFMEIAGRQMAYLDEGQG---PVLLFgHSYLWDSAMWAPQIEALKGQYRCIVPELWGHGDSDALPEGAcTLATLARDHLA 79
Cdd:PRK14875 112 RKARIGGRTVRYLRLGEGdgtPVVLI-HGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGAG-SLDELAAAVLA 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 80 LLDALGIDEFVLVGLSIGGMWGVELARMAPARLKGLVLMDSfVGLEPQITCErYLGmlamieqlGTIPAPIVEQVAP--- 156
Cdd:PRK14875 190 FLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAP-AGLGPEINGD-YID--------GFVAAESRRELKPvle 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 157 LFFADQpdaDLMSG--FKARLAAWPADKV-AAMVAVGRSF----VTREDRIEWLEAISVPALVMTGSQDKARPV-----L 224
Cdd:PRK14875 260 LLFADP---ALVTRqmVEDLLKYKRLDGVdDALRALADALfaggRQRVDLRDRLASLAIPVLVIWGEQDRIIPAahaqgL 336
|
250 260 270 280
....*....|....*....|....*....|....*....|.
gi 640507330 225 EGYLMAEVLgcpfkevPAAGHIASLENPAFVNDQLGAFLAA 265
Cdd:PRK14875 337 PDGVAVHVL-------PGAGHMPQMEAAADVNRLLAEFLGK 370
|
|
| PldB |
COG2267 |
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism]; |
6-150 |
1.81e-11 |
|
Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism];
Pssm-ID: 441868 [Multi-domain] Cd Length: 221 Bit Score: 61.94 E-value: 1.81e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 6 EIAGRQMAYLDEGQGPVLLFgHSYLWDSAMWAPQIEALKGQ-YRCIVPELWGHGDSDALPEGACTLATLARDHLALLDAL 84
Cdd:COG2267 15 RLRGRRWRPAGSPRGTVVLV-HGLGEHSGRYAELAEALAAAgYAVLAFDLRGHGRSDGPRGHVDSFDDYVDDLRAALDAL 93
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 85 ---GIDEFVLVGLSIGGMWGVELARMAPARLKGLVLMDSFVGLEPQITC-ERYLGMLAMIEQLGTIPAPI 150
Cdd:COG2267 94 rarPGLPVVLLGHSMGGLIALLYAARYPDRVAGLVLLAPAYRADPLLGPsARWLRALRLAEALARIDVPV 163
|
|
| PRK03204 |
PRK03204 |
haloalkane dehalogenase; Provisional |
4-117 |
9.77e-10 |
|
haloalkane dehalogenase; Provisional
Pssm-ID: 179554 [Multi-domain] Cd Length: 286 Bit Score: 57.94 E-value: 9.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 4 FMEIAGRqMAYLDEGQGPVLLFGHSYLWDSAMWAPQIEALKGQYRCIVPELWGHGDSDALPEGACTLATLARDHLALLDA 83
Cdd:PRK03204 19 FDSSRGR-IHYIDEGTGPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDH 97
|
90 100 110
....*....|....*....|....*....|....
gi 640507330 84 LGIDEFVLVGLSIGGMWGVELARMAPARLKGLVL 117
Cdd:PRK03204 98 LGLDRYLSMGQDWGGPISMAVAVERADRVRGVVL 131
|
|
| YvaK |
COG1647 |
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism]; |
5-266 |
1.61e-09 |
|
Esterase/lipase [Secondary metabolites biosynthesis, transport and catabolism];
Pssm-ID: 441253 [Multi-domain] Cd Length: 246 Bit Score: 56.87 E-value: 1.61e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 5 MEIAGRQMAYLDEGQGPVLLFgHSYL---WDSAMWAPQIEAlKGqYRCIVPELWGHGDSdalPEgacTLATL-------- 73
Cdd:COG1647 1 MKILGAEPFFLEGGRKGVLLL-HGFTgspAEMRPLAEALAK-AG-YTVYAPRLPGHGTS---PE---DLLKTtwedwled 71
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 74 ARDHLALLDALGiDEFVLVGLSIGGMWGVELARMAPArLKGLVLMDSFVglepqitceRYLGMLAMIeqlgtipAPIVEQ 153
Cdd:COG1647 72 VEEAYEILKAGY-DKVIVIGLSMGGLLALLLAARYPD-VAGLVLLSPAL---------KIDDPSAPL-------LPLLKY 133
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 154 VAPLFFADQPDADLMSGFKARLAAWPADKVAAMVAVGRSfvTREDriewLEAISVPALVMTGSQDKARPVLEGYLMAEVL 233
Cdd:COG1647 134 LARSLRGIGSDIEDPEVAEYAYDRTPLRALAELQRLIRE--VRRD----LPKITAPTLIIQSRKDEVVPPESARYIYERL 207
|
250 260 270
....*....|....*....|....*....|....*..
gi 640507330 234 GCPFKEV---PAAGHIASLENPA-FVNDQLGAFLAAL 266
Cdd:COG1647 208 GSPDKELvwlEDSGHVITLDKDReEVAEEILDFLERL 244
|
|
| Abhydrolase_6 |
pfam12697 |
Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse ... |
41-257 |
3.24e-08 |
|
Alpha/beta hydrolase family; This family contains alpha/beta hydrolase enzymes of diverse specificity.
Pssm-ID: 463673 [Multi-domain] Cd Length: 211 Bit Score: 52.48 E-value: 3.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 41 EALKGQYRCIVPELWGHGDSDALPEGActlaTLARDHLALLDALGIDE-FVLVGLSIGGMWGVELARMAPARlkgLVLMD 119
Cdd:pfam12697 16 ALLAAGVAVLAPDLPGHGSSSPPPLDL----ADLADLAALLDELGAARpVVLVGHSLGGAVALAAAAAALVV---GVLVA 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 120 SFVGLEPQITcerylgmlamiEQLGTIPAPIVEQVAPLFFADQPDADLMSGFKARLAAWPADKVAAMVAVGRSFVTREDR 199
Cdd:pfam12697 89 PLAAPPGLLA-----------ALLALLARLGAALAAPAWLAAESLARGFLDDLPADAEWAAALARLAALLAALALLPLAA 157
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 640507330 200 iewLEAISVPALVMtGSQDKARPVLEGYLMAEVLGCPFKEVPAAGHiASLENPAFVND 257
Cdd:pfam12697 158 ---WRDLPVPVLVL-AEEDRLVPELAQRLLAALAGARLVVLPGAGH-LPLDDPEEVAE 210
|
|
| PRK11126 |
PRK11126 |
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional |
20-264 |
7.36e-07 |
|
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Pssm-ID: 236855 [Multi-domain] Cd Length: 242 Bit Score: 49.07 E-value: 7.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 20 GPVLLFGHSYLWDSAMWAPQIEALKgQYRCIVPELWGHGDSDALP----EGACTLATlardhlALLDALGIDEFVLVGLS 95
Cdd:PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAISvdgfADVSRLLS------QTLQSYNILPYWLVGYS 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 96 IGGmwgvelaRMA--------PARLKGLVLMDSFVGLEPQITCE-RYLGMLAMIEQLGTIPApivEQVaplfFAD---QP 163
Cdd:PRK11126 75 LGG-------RIAmyyacqglAGGLCGLIVEGGNPGLQNAEERQaRWQNDRQWAQRFRQEPL---EQV----LADwyqQP 140
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 164 D-ADLMSGFKARLAAWPADK----VAAMVaVGRSFVTREDRIEWLEAISVPALVMTGSQD-KARPvlegylMAEVLGCPF 237
Cdd:PRK11126 141 VfASLNAEQRQQLVAKRSNNngaaVAAML-EATSLAKQPDLRPALQALTFPFYYLCGERDsKFQA------LAQQLALPL 213
|
250 260
....*....|....*....|....*..
gi 640507330 238 KEVPAAGHIASLENPAFVNDQLGAFLA 264
Cdd:PRK11126 214 HVIPNAGHNAHRENPAAFAASLAQILR 240
|
|
| PRK10673 |
PRK10673 |
esterase; |
57-119 |
1.17e-05 |
|
esterase;
Pssm-ID: 182637 [Multi-domain] Cd Length: 255 Bit Score: 45.49 E-value: 1.17e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 640507330 57 HGDSDALPEgaCTLATLARDHLALLDALGIDEFVLVGLSIGGMWGVELARMAPARLKGLVLMD 119
Cdd:PRK10673 53 HGLSPRDPV--MNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAID 113
|
|
| PLN02824 |
PLN02824 |
hydrolase, alpha/beta fold family protein |
18-119 |
7.73e-05 |
|
hydrolase, alpha/beta fold family protein
Pssm-ID: 178419 [Multi-domain] Cd Length: 294 Bit Score: 43.19 E-value: 7.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 18 GQGPVLLFGHSYLWDSAMWAPQIEALKGQYRCIVPELWGHGDSD------ALPEGACTLATLARDHLALLDALGIDEFVL 91
Cdd:PLN02824 27 TSGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDkpnprsAPPNSFYTFETWGEQLNDFCSDVVGDPAFV 106
|
90 100
....*....|....*....|....*...
gi 640507330 92 VGLSIGGMWGVELARMAPARLKGLVLMD 119
Cdd:PLN02824 107 ICNSVGGVVGLQAAVDAPELVRGVMLIN 134
|
|
| PLN02980 |
PLN02980 |
2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate ... |
16-125 |
9.27e-05 |
|
2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Pssm-ID: 215530 [Multi-domain] Cd Length: 1655 Bit Score: 43.69 E-value: 9.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 16 DEGQGPVLLFGHSYLWDSAMWAPQIEALKGQYRCIVPELWGHGDSDAL-------PEGACTLATLARDHLALLDALGIDE 88
Cdd:PLN02980 1367 QNAEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQnhaketqTEPTLSVELVADLLYKLIEHITPGK 1446
|
90 100 110
....*....|....*....|....*....|....*..
gi 640507330 89 FVLVGLSIGGMWGVELARMAPARLKGLVLMDSFVGLE 125
Cdd:PLN02980 1447 VTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLK 1483
|
|
| PRK00870 |
PRK00870 |
haloalkane dehalogenase; Provisional |
12-121 |
1.15e-04 |
|
haloalkane dehalogenase; Provisional
Pssm-ID: 179147 [Multi-domain] Cd Length: 302 Bit Score: 42.65 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 12 MAYLDEGQ--GPVLLFGH-----SYLWdSAMWAPQIEAlkgQYRCIVPELWGHGDSDAlPEGACTLaTLARdHL----AL 80
Cdd:PRK00870 36 MHYVDEGPadGPPVLLLHgepswSYLY-RKMIPILAAA---GHRVIAPDLIGFGRSDK-PTRREDY-TYAR-HVewmrSW 108
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 640507330 81 LDALGIDEFVLVGLSIGGMWGVELARMAPARLKGLVLMDSF 121
Cdd:PRK00870 109 FEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTG 149
|
|
| PRK10349 |
PRK10349 |
pimeloyl-ACP methyl ester esterase BioH; |
18-243 |
2.74e-04 |
|
pimeloyl-ACP methyl ester esterase BioH;
Pssm-ID: 137836 [Multi-domain] Cd Length: 256 Bit Score: 41.54 E-value: 2.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 18 GQGPV-LLFGHSYLWDSAMWAPQIEALKGQYRCIVPELWGHGDSDALpeGACTLATLArdhlALLDALGIDEFVLVGLSI 96
Cdd:PRK10349 10 GQGNVhLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGF--GALSLADMA----EAVLQQAPDKAIWLGWSL 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 97 GGMWGVELARMAPARLKGLVLM---------DSFVGLEPQI--------------TCERYLGMLAMIEQLGTIPAPIVEQ 153
Cdd:PRK10349 84 GGLVASQIALTHPERVQALVTVasspcfsarDEWPGIKPDVlagfqqqlsddfqrTVERFLALQTMGTETARQDARALKK 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 154 VapLFFADQPDADLMSGfkarlaawpadkvaamvavGRSFVTREDRIEWLEAISVPALVMTGSQD-----KARPVL---- 224
Cdd:PRK10349 164 T--VLALPMPEVDVLNG-------------------GLEILKTVDLRQPLQNVSMPFLRLYGYLDglvprKVVPMLdklw 222
|
250 260
....*....|....*....|..
gi 640507330 225 ---EGYLMAEVLGCPFKEVPAA 243
Cdd:PRK10349 223 phsESYIFAKAAHAPFISHPAE 244
|
|
| PRK05855 |
PRK05855 |
SDR family oxidoreductase; |
20-101 |
3.18e-04 |
|
SDR family oxidoreductase;
Pssm-ID: 235628 [Multi-domain] Cd Length: 582 Bit Score: 41.89 E-value: 3.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 20 GPVLLFGHSYLWDSAMWAPQIEALKGQYRCIVPELWGHGDSDA-LPEGACTLATLARDHLALLDALGIDEFVLVglsIGG 98
Cdd:PRK05855 25 RPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSApKRTAAYTLARLADDFAAVIDAVSPDRPVHL---LAH 101
|
...
gi 640507330 99 MWG 101
Cdd:PRK05855 102 DWG 104
|
|
| PLN02578 |
PLN02578 |
hydrolase |
4-120 |
8.59e-04 |
|
hydrolase
Pssm-ID: 215315 [Multi-domain] Cd Length: 354 Bit Score: 40.21 E-value: 8.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 4 FMEIAGRQMAYLDEGQGPVLLFGHSYLWDSAMWAPQIEALKGQYRCIVPELWGHGDSD-ALPEGActlATLARDHLA-LL 81
Cdd:PLN02578 70 FWTWRGHKIHYVVQGEGLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDkALIEYD---AMVWRDQVAdFV 146
|
90 100 110
....*....|....*....|....*....|....*....
gi 640507330 82 DALGIDEFVLVGLSIGGMWGVELARMAPARLKGLVLMDS 120
Cdd:PLN02578 147 KEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNS 185
|
|
| PRK08775 |
PRK08775 |
homoserine O-succinyltransferase; |
74-117 |
3.93e-03 |
|
homoserine O-succinyltransferase;
Pssm-ID: 181553 [Multi-domain] Cd Length: 343 Bit Score: 38.23 E-value: 3.93e-03
10 20 30 40
....*....|....*....|....*....|....*....|....*
gi 640507330 74 ARDHLALLDALGIDE-FVLVGLSIGGMWGVELARMAPARLKGLVL 117
Cdd:PRK08775 124 ADAIALLLDALGIARlHAFVGYSYGALVGLQFASRHPARVRTLVV 168
|
|
| Esterase_713 |
cd12807 |
Novel bacterial esterase 713 that cleaves esters on halogenated cyclic compounds; This family ... |
19-194 |
6.11e-03 |
|
Novel bacterial esterase 713 that cleaves esters on halogenated cyclic compounds; This family contains proteins similar to a novel bacterial esterase (esterase 713) with the alpha/beta hydrolase fold that cleaves esters on halogenated cyclic compounds. This Alcaligenes esterase, however, does not contain the GXSXXG pentapeptide around the active site serine residue as seen in other esterase families. This enzyme is active as a dimer though its natural substrate is unknown. It has two distinct disulfide bridges; one formed between adjacent cysteines appears to facilitate the correct formation of the oxyanion cleft in the catalytic site. Esterase 713 also resembles human pancreatic lipase in its location of the acidic residue of the catalytic triad. It is possibly exported from the cytosol to the periplasmic space. A large majority of sequences in this family have yet to be characterized.
Pssm-ID: 214006 Cd Length: 315 Bit Score: 37.30 E-value: 6.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 19 QGPVLLFGHSYLWDSAMWAPQ-----------IEALKGQYRCIVPELwghgdSDALPEGACTLATLArdhlALLDALGid 87
Cdd:cd12807 121 LPAIFRAGDEFAWTNFRFGPTygvpfpdtqfpVEAVAEFYKQVVPDL-----NATLPTPNPTPNALA----ALADKLG-- 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 88 EFVLVGLSIGGMWGVELARMAPARLKGLvlmdsfVGLEPQITCERYlgmLAMIEQLGTIPAPIVeqvaplfFADQPDADL 167
Cdd:cd12807 190 GAVLLGHSQSGPFPLEAALLRPAGVKGI------VSVEPGCCPAPT---ADQIKTLAKIPILVV-------FGDHLDAAS 253
|
170 180
....*....|....*....|....*..
gi 640507330 168 MSGFKARLAAWPADKVAAMVAVGRSFV 194
Cdd:cd12807 254 GPTWQQRLQACQAFVDRINAAGGDAKL 280
|
|
| EstA |
COG1075 |
Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and ... |
16-124 |
6.32e-03 |
|
Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and metabolism];
Pssm-ID: 440693 [Multi-domain] Cd Length: 106 Bit Score: 35.58 E-value: 6.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640507330 16 DEGQGPVLLFgHSYLWDSAMWAPQIEALKGQ-YRCIVPEL-WGHGDSDALpegACTLATLARdhlALLDALGIDEFVLVG 93
Cdd:COG1075 2 AATRYPVVLV-HGLGGSAASWAPLAPRLRAAgYPVYALNYpSTNGSIEDS---AEQLAAFVD---AVLAATGAEKVDLVG 74
|
90 100 110
....*....|....*....|....*....|.
gi 640507330 94 LSIGGMwgveLARMAPARLKGLVLMDSFVGL 124
Cdd:COG1075 75 HSMGGL----VARYYLKRLGGAAKVARVVTL 101
|
|
|