NCBI Conserved Domain Search

Conserved domains on [gi|640581318|ref|WP_025011517|]

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MULTISPECIES: hypothetical protein [Shewanella]

Protein Classification

lipase family protein( domain architecture ID 1903390)

lipase family protein such as triacylglycerol lipase, which is an alpha/beta hydrolase that catalyzes the hydrolysis of a triacylglycerol to form the corresponding diacylglycerol and a carboxylate

CATH: 3.40.50.1820

EC: 3.1.1.-

Gene Ontology: GO:0006629|GO:0016787|GO:0016298

PubMed: 7946464|1290943

SCOP: 3000102

Graphical summary

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List of domain hits

Name

Accession

Description

Interval

E-value

EstA super family

cl43327

Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and ...

25-136

2.73e-06

Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and metabolism];

The actual alignment was detected with superfamily member COG1075:

Pssm-ID: 440693 [Multi-domain] Cd Length: 106 Bit Score: 45.21 E-value: 2.73e-06

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640581318  25 VAFVHGTGkQTDALNDYWTREFVDSvrqgistpsNYQVINCDFEQYMWD-EAAAGCLVDQLQSFINARNLDQLILITHSN 103
Cdd:COG1075    8 VVLVHGLG-GSAASWAPLAPRLRAA---------GYPVYALNYPSTNGSiEDSAEQLAAFVDAVLAATGAEKVDLVGHSM 77

                         90       100       110
                 ....*....|....*....|....*....|...
gi 640581318 104 GGNIVRWVLSNPTWDGRypavinsISRVIALAP 136
Cdd:COG1075   78 GGLVARYYLKRLGGAAK-------VARVVTLGT 103

Name

Accession

Description

Interval

E-value

EstA

COG1075

Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and ...

25-136

2.73e-06

Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and metabolism];

Pssm-ID: 440693 [Multi-domain] Cd Length: 106 Bit Score: 45.21 E-value: 2.73e-06

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640581318  25 VAFVHGTGkQTDALNDYWTREFVDSvrqgistpsNYQVINCDFEQYMWD-EAAAGCLVDQLQSFINARNLDQLILITHSN 103
Cdd:COG1075    8 VVLVHGLG-GSAASWAPLAPRLRAA---------GYPVYALNYPSTNGSiEDSAEQLAAFVDAVLAATGAEKVDLVGHSM 77

                         90       100       110
                 ....*....|....*....|....*....|...
gi 640581318 104 GGNIVRWVLSNPTWDGRypavinsISRVIALAP 136
Cdd:COG1075   78 GGLVARYYLKRLGGAAK-------VARVVTLGT 103

Name

Accession

Description

Interval

E-value

EstA

COG1075

Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and ...

25-136

2.73e-06

Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold [Lipid transport and metabolism];

Pssm-ID: 440693 [Multi-domain] Cd Length: 106 Bit Score: 45.21 E-value: 2.73e-06

                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 640581318  25 VAFVHGTGkQTDALNDYWTREFVDSvrqgistpsNYQVINCDFEQYMWD-EAAAGCLVDQLQSFINARNLDQLILITHSN 103
Cdd:COG1075    8 VVLVHGLG-GSAASWAPLAPRLRAA---------GYPVYALNYPSTNGSiEDSAEQLAAFVDAVLAATGAEKVDLVGHSM 77

                         90       100       110
                 ....*....|....*....|....*....|...
gi 640581318 104 GGNIVRWVLSNPTWDGRypavinsISRVIALAP 136
Cdd:COG1075   78 GGLVARYYLKRLGGAAK-------VARVVTLGT 103

Blast search parameters

Data Source:	Precalculated data, version = cdd.v.3.21
Preset Options:	Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01