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Conserved domains on  [gi|642985028|ref|WP_025198091|]
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glycosyltransferase, partial [Brucella suis]

Protein Classification

glycosyltransferase family protein( domain architecture ID 56)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Glycosyltransferase_GTB-type super family cl10013
glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases ...
 33-318 6.31e-41

glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


The actual alignment was detected with superfamily member cd03809:

Pssm-ID: 471961 [Multi-domain]  Cd Length: 362  Bit Score: 146.35  E-value: 6.31e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  33 KIVMAAPDIVFFDYPgNFRGIREHNSYDRMLK-SLRSADHLVCYSENAKqKHFVERCDVPAEKITVIRHGFvdlgasgaa 111
Cdd:cd03809  103 PQVVTIHDLIPLRYP-EFFPKRFRLYYRLLLPiSLRRADAIITVSEATR-DDIIKFYGVPPEKIVVIPLGV--------- 171

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 112 ilrqdaldtlHAFIKKNDGrmPEYLKGFRFDDVPFFFYSSQLRPHKNIEGLIRAYAKVLKEHQRPAKLILTAQFQYDKRI 191
Cdd:cd03809  172 ----------DPSFFPPES--AAVLIAKYLLPEPYFLYVGTLEPRKNHERLLKAFALLKKQGGDLKLVIVGGKGWEDEEL 239

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 192 QTFIDDNGLHADVLSLHSVPNKVLAALYHLASLSVTPTNFEgGFPFTFSEAYSVGTPSIMSRIPVVQEVIDDPELQdlmt 271
Cdd:cd03809  240 LDLVKKLGLGGRVRFLGYVSDEDLPALYRGARAFVFPSLYE-GFGLPVLEAMACGTPVIASNISVLPEVAGDAALY---- 314

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 642985028 272 FNPLDVDDIANKMIFGLDNRQRLFEAQSSLYAKLSARTWQVAANDYL 318
Cdd:cd03809  315 FDPLDPESIADAILRLLEDPSLREELIRKGLERAKKFSWEKTAEKTL 361
 
Name Accession Description Interval E-value
GT4_MtfB-like cd03809
glycosyltransferases MtfB, WbpX, and similar proteins; This family is most closely related to ...
 33-318 6.31e-41

glycosyltransferases MtfB, WbpX, and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.


Pssm-ID: 340838 [Multi-domain]  Cd Length: 362  Bit Score: 146.35  E-value: 6.31e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  33 KIVMAAPDIVFFDYPgNFRGIREHNSYDRMLK-SLRSADHLVCYSENAKqKHFVERCDVPAEKITVIRHGFvdlgasgaa 111
Cdd:cd03809  103 PQVVTIHDLIPLRYP-EFFPKRFRLYYRLLLPiSLRRADAIITVSEATR-DDIIKFYGVPPEKIVVIPLGV--------- 171

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 112 ilrqdaldtlHAFIKKNDGrmPEYLKGFRFDDVPFFFYSSQLRPHKNIEGLIRAYAKVLKEHQRPAKLILTAQFQYDKRI 191
Cdd:cd03809  172 ----------DPSFFPPES--AAVLIAKYLLPEPYFLYVGTLEPRKNHERLLKAFALLKKQGGDLKLVIVGGKGWEDEEL 239

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 192 QTFIDDNGLHADVLSLHSVPNKVLAALYHLASLSVTPTNFEgGFPFTFSEAYSVGTPSIMSRIPVVQEVIDDPELQdlmt 271
Cdd:cd03809  240 LDLVKKLGLGGRVRFLGYVSDEDLPALYRGARAFVFPSLYE-GFGLPVLEAMACGTPVIASNISVLPEVAGDAALY---- 314

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 642985028 272 FNPLDVDDIANKMIFGLDNRQRLFEAQSSLYAKLSARTWQVAANDYL 318
Cdd:cd03809  315 FDPLDPESIADAILRLLEDPSLREELIRKGLERAKKFSWEKTAEKTL 361
Glycos_transf_1 pfam00534
Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease ...
 143-291 3.54e-16

Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family.


Pssm-ID: 425737 [Multi-domain]  Cd Length: 158  Bit Score: 74.62  E-value: 3.54e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  143 DVPFFFYSSQLRPHKNIEGLIRAYAKVLKEHQrPAKLILTAQFQYDKRIQTFIDDNGLHADVLSLHSVPNKVLAALYHLA 222
Cdd:pfam00534   1 KKKIILFVGRLEPEKGLDLLIKAFALLKEKNP-NLKLVIAGDGEEEKRLKKLAEKLGLGDNVIFLGFVSDEDLPELLKIA 79

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 642985028  223 SLSVTPTNFEgGFPFTFSEAYSVGTPSIMSRIPVVQEVIDDPELQDLMTFNplDVDDIANKMIFGLDNR 291
Cdd:pfam00534  80 DVFVLPSRYE-GFGIVLLEAMACGLPVIASDVGGPPEVVKDGETGFLVKPN--NAEALAEAIDKLLEDE 145
RfaB COG0438
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
 214-324 2.12e-11

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440207 [Multi-domain]  Cd Length: 123  Bit Score: 60.39  E-value: 2.12e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 214 VLAALYHLASLSVTPTNFEGgFPFTFSEAYSVGTPSIMSRIPVVQEVIDDPElqDLMTFNPLDVDDIANKMIFGLDNRQR 293
Cdd:COG0438   13 LLEALLAAADVFVLPSRSEG-FGLVLLEAMAAGLPVIATDVGGLPEVIEDGE--TGLLVPPGDPEALAEAILRLLEDPEL 89

                         90       100       110
                 ....*....|....*....|....*....|..
gi 642985028 294 LFEAQSSLYAKLSAR-TWQVAANDYLSLLKSV 324
Cdd:COG0438   90 RRRLGEAARERAEERfSWEAIAERLLALYEEL 121
PRK15484 PRK15484
lipopolysaccharide N-acetylglucosaminyltransferase;
148-323 4.84e-04

lipopolysaccharide N-acetylglucosaminyltransferase;


Pssm-ID: 185381 [Multi-domain]  Cd Length: 380  Bit Score: 41.31  E-value: 4.84e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 148 FYSSQLRPHKNIEGLIRAYAKVLKEHQRpAKLILTAQF---------QYDKRIQTFIDDNGLHADVLSlhSVPNKVLAAL 218
Cdd:PRK15484 197 LYAGRISPDKGILLLMQAFEKLATAHSN-LKLVVVGDPtasskgekaAYQKKVLEAAKRIGDRCIMLG--GQPPEKMHNY 273

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 219 YHLASLSVTPTNFEGGFPFTFSEAYSVGTPSIMSRIPVVQEVIDDPE----LQDLMTfnpldVDDIANKMIFGLDNRQRL 294
Cdd:PRK15484 274 YPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGItgyhLAEPMT-----SDSIISDINRTLADPELT 348

                        170       180
                 ....*....|....*....|....*....
gi 642985028 295 FEAQSSLYAKLSARTWQVAANDYLSLLKS 323
Cdd:PRK15484 349 QIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377
 
Name Accession Description Interval E-value
GT4_MtfB-like cd03809
glycosyltransferases MtfB, WbpX, and similar proteins; This family is most closely related to ...
 33-318 6.31e-41

glycosyltransferases MtfB, WbpX, and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. MtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.


Pssm-ID: 340838 [Multi-domain]  Cd Length: 362  Bit Score: 146.35  E-value: 6.31e-41
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  33 KIVMAAPDIVFFDYPgNFRGIREHNSYDRMLK-SLRSADHLVCYSENAKqKHFVERCDVPAEKITVIRHGFvdlgasgaa 111
Cdd:cd03809  103 PQVVTIHDLIPLRYP-EFFPKRFRLYYRLLLPiSLRRADAIITVSEATR-DDIIKFYGVPPEKIVVIPLGV--------- 171

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 112 ilrqdaldtlHAFIKKNDGrmPEYLKGFRFDDVPFFFYSSQLRPHKNIEGLIRAYAKVLKEHQRPAKLILTAQFQYDKRI 191
Cdd:cd03809  172 ----------DPSFFPPES--AAVLIAKYLLPEPYFLYVGTLEPRKNHERLLKAFALLKKQGGDLKLVIVGGKGWEDEEL 239

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 192 QTFIDDNGLHADVLSLHSVPNKVLAALYHLASLSVTPTNFEgGFPFTFSEAYSVGTPSIMSRIPVVQEVIDDPELQdlmt 271
Cdd:cd03809  240 LDLVKKLGLGGRVRFLGYVSDEDLPALYRGARAFVFPSLYE-GFGLPVLEAMACGTPVIASNISVLPEVAGDAALY---- 314

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 642985028 272 FNPLDVDDIANKMIFGLDNRQRLFEAQSSLYAKLSARTWQVAANDYL 318
Cdd:cd03809  315 FDPLDPESIADAILRLLEDPSLREELIRKGLERAKKFSWEKTAEKTL 361
GT4_PimA-like cd03801
phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 ...
 14-322 5.98e-25

phosphatidyl-myo-inositol mannosyltransferase; This family is most closely related to the GT4 family of glycosyltransferases and named after PimA in Propionibacterium freudenreichii, which is involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM), and catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea.


Pssm-ID: 340831 [Multi-domain]  Cd Length: 366  Bit Score: 103.39  E-value: 5.98e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  14 IKVWYVPAMFWPEVANIKSKIVMAAPDIVFFDYPGNFRGIREHNSYDRMLKSLRSADHLVCYSENAKQkHFVERCDVPAE 93
Cdd:cd03801   86 VHAHGLLAALLAALLALLLGAPLVVTLHGAEPGRLLLLLAAERRLLARAEALLRRADAVIAVSEALRD-ELRALGGIPPE 164

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  94 KITVIRHGfVDLgasgaailrqdaldtlhafikkNDGRMPEYLKGFRFDDVPFFFYSSQLRPHKNIEGLIRAYAKVLKEH 173
Cdd:cd03801  165 KIVVIPNG-VDL----------------------ERFSPPLRRKLGIPPDRPVLLFVGRLSPRKGVDLLLEALAKLLRRG 221

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 174 QRPAKLILTAQFQYDKRIQTFidDNGLHADVLSLHSVPNKVLAALYHLASLSVTPTNFEGgFPFTFSEAYSVGTPSIMSR 253
Cdd:cd03801  222 PDVRLVIVGGDGPLRAELEEL--ELGLGDRVRFLGFVPDEELPALYAAADVFVLPSRYEG-FGLVVLEAMAAGLPVVATD 298

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 254 IPVVQEVIDDPElqDLMTFNPLDVDDIANKMIFGLDNRQRLFEAQSSLYAKLSAR-TWQVAANDYLSLLK 322
Cdd:cd03801  299 VGGLPEVVEDGE--GGLVVPPDDVEALADALLRLLADPELRARLGRAARERVAERfSWERVAERLLDLYR 366
Glycos_transf_1 pfam00534
Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease ...
 143-291 3.54e-16

Glycosyl transferases group 1; Mutations in this domain of Swiss:P37287 lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family.


Pssm-ID: 425737 [Multi-domain]  Cd Length: 158  Bit Score: 74.62  E-value: 3.54e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  143 DVPFFFYSSQLRPHKNIEGLIRAYAKVLKEHQrPAKLILTAQFQYDKRIQTFIDDNGLHADVLSLHSVPNKVLAALYHLA 222
Cdd:pfam00534   1 KKKIILFVGRLEPEKGLDLLIKAFALLKEKNP-NLKLVIAGDGEEEKRLKKLAEKLGLGDNVIFLGFVSDEDLPELLKIA 79

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 642985028  223 SLSVTPTNFEgGFPFTFSEAYSVGTPSIMSRIPVVQEVIDDPELQDLMTFNplDVDDIANKMIFGLDNR 291
Cdd:pfam00534  80 DVFVLPSRYE-GFGIVLLEAMACGLPVIASDVGGPPEVVKDGETGFLVKPN--NAEALAEAIDKLLEDE 145
RfaB COG0438
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
 214-324 2.12e-11

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440207 [Multi-domain]  Cd Length: 123  Bit Score: 60.39  E-value: 2.12e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 214 VLAALYHLASLSVTPTNFEGgFPFTFSEAYSVGTPSIMSRIPVVQEVIDDPElqDLMTFNPLDVDDIANKMIFGLDNRQR 293
Cdd:COG0438   13 LLEALLAAADVFVLPSRSEG-FGLVLLEAMAAGLPVIATDVGGLPEVIEDGE--TGLLVPPGDPEALAEAILRLLEDPEL 89

                         90       100       110
                 ....*....|....*....|....*....|..
gi 642985028 294 LFEAQSSLYAKLSAR-TWQVAANDYLSLLKSV 324
Cdd:COG0438   90 RRRLGEAARERAEERfSWEAIAERLLALYEEL 121
GT4_GT28_WabH-like cd03811
family 4 and family 28 glycosyltransferases similar to Klebsiella WabH; This family is most ...
 53-263 1.49e-10

family 4 and family 28 glycosyltransferases similar to Klebsiella WabH; This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.


Pssm-ID: 340839 [Multi-domain]  Cd Length: 351  Bit Score: 61.61  E-value: 1.49e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  53 IREHNSYD----------RMLKSLRSADHLVCYSEnAKQKHFVERCDVPAEKITVIrHGFVDLgasgaailrqdaldtlh 122
Cdd:cd03811  110 AWIHSSLSklyylkkkllLKLKLYKKADKIVCVSK-GIKEDLIRLGPSPPEKIEVI-YNPIDI----------------- 170

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 123 AFIKKndgrMPEYLKGFRFDDVPFFFYSSQLRPHKNIEGLIRAYAKvLKEHQRPAKLILTAQFQYDKRIQTFIDDNGLHA 202
Cdd:cd03811  171 DRIRA----LAKEPILNEPEDGPVILAVGRLDPQKGHDLLIEAFAK-LRKKYPDVKLVILGDGPLREELEKLAKELGLAE 245

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 642985028 203 DVLSLHSVPNkvLAALYHLASLSVTPTNFEGgFPFTFSEAYSVGTPSIMSRIPVVQEVIDD 263
Cdd:cd03811  246 RVIFLGFQSN--PYPYLKKADLFVLSSRYEG-FPNVLLEAMALGTPVVSTDCPGPREILDD 303
GT4_sucrose_synthase cd03800
sucrose-phosphate synthase and similar proteins; This family is most closely related to the ...
 66-319 3.62e-10

sucrose-phosphate synthase and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.


Pssm-ID: 340830 [Multi-domain]  Cd Length: 398  Bit Score: 60.33  E-value: 3.62e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  66 LRSADHLV--CYSENAKQKHFVercDVPAEKITVIRHGfVDLgasgaailrqdalDTLHAFIKKNDGRMPeylkgFRFD- 142
Cdd:cd03800  161 LEAADRVIasTPQEADELISLY---GADPSRINVVPPG-VDL-------------ERFFPVDRAEARRAR-----LLLPp 218

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 143 DVPFFFYSSQLRPHKNIEGLIRAYAKvLKEHQRPAKLILTAQFQYDK------RIQTFIDDNGLHADVLSLHSVPNKVLA 216
Cdd:cd03800  219 DKPVVLALGRLDPRKGIDTLVRAFAQ-LPELRELANLVLVGGPSDDPlsmdreELAELAEELGLIDRVRFPGRVSRDDLP 297

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 217 ALYHLASLSVTPTNFEggfPF--TFSEAYSVGTPSIMSRIPVVQEVIddpelQDLMT---FNPLDVDDIANKMifgldnr 291
Cdd:cd03800  298 ELYRAADVFVVPSLYE---PFglTAIEAMACGTPVVATAVGGLQDIV-----RDGRTgllVDPHDPEALAAAL------- 362

                        250       260       270
                 ....*....|....*....|....*....|....*..
gi 642985028 292 QRLFeAQSSLYAKLSAR---------TWQVAANDYLS 319
Cdd:cd03800  363 RRLL-DDPALWQRLSRAglerarahyTWESVADQLLT 398
Glyco_trans_1_4 pfam13692
Glycosyl transferases group 1;
154-290 1.33e-08

Glycosyl transferases group 1;


Pssm-ID: 463957 [Multi-domain]  Cd Length: 138  Bit Score: 52.90  E-value: 1.33e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  154 RPHKNIEGLIRAYAKVLKEhQRPAKLILT---AQFQYDKRIqtfiddNGLHADVLSLHSVPNkvLAALYHLASLSVTPTN 230
Cdd:pfam13692  12 PNVKGVDYLLEAVPLLRKR-DNDVRLVIVgdgPEEELEELA------AGLEDRVIFTGFVED--LAELLAAADVFVLPSL 82

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  231 FEGgFPFTFSEAYSVGTPSIMSRIPVVQEVIDDpelQDLMTFNPLDVDDIANKMIFGLDN 290
Cdd:pfam13692  83 YEG-FGLKLLEAMAAGLPVVATDVGGIPELVDG---ENGLLVPPGDPEALAEAILRLLED 138
GT4_UGDG-like cd03817
UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins; This family is most ...
 142-313 1.57e-08

UDP-Glc:1,2-diacylglycerol 3-a-glucosyltransferase and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (EC 2.4.1.337, UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.


Pssm-ID: 340844 [Multi-domain]  Cd Length: 372  Bit Score: 55.36  E-value: 1.57e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 142 DDVPFFFYSSQLRPHKNIEGLIRAYAKVLKEhqRPAKLILTAQFQYDKRIQTFIDDNGLHADVLSLHSVPNKVLAALYHL 221
Cdd:cd03817  199 PDEPILLYVGRLAKEKNIDFLLRAFAELKKE--PNIKLVIVGDGPEREELKELARELGLADKVIFTGFVPREELPEYYKA 276

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 222 ASLSVTPTNFEgGFPFTFSEAYSVGTPSIMSRIPVVQEVIDDPElqDLMTFNPlDVDDIANKMIFGLDNRQRLfeAQSSL 301
Cdd:cd03817  277 ADLFVFASTTE-TQGLVYLEAMAAGLPVVAAKDPAASELVEDGE--NGFLFEP-NDETLAEKLLHLRENLELL--RKLSK 350

                        170
                 ....*....|..
gi 642985028 302 YAKLSARTWQVA 313
Cdd:cd03817  351 NAEISAREFAFA 362
GT4_WlbH-like cd03798
Bordetella parapertussis WlbH and similar proteins; This family is most closely related to the ...
 142-324 6.48e-08

Bordetella parapertussis WlbH and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Staphylococcus aureus CapJ may be involved in capsule polysaccharide biosynthesis. WlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.


Pssm-ID: 340828 [Multi-domain]  Cd Length: 376  Bit Score: 53.54  E-value: 6.48e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 142 DDVPFFFYSSQLRPHKNIEGLIRAYAKVLKEHQRpAKLILTAQFQYDKRIQTFIDDNGLHADVLSLHSVPNKVLAALYHL 221
Cdd:cd03798  198 LDAFVILFVGRLIPRKGIDLLLEAFARLAKARPD-VVLLIVGDGPLREALRALAEDLGLGDRVTFTGRLPHEQVPAYYRA 276

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 222 ASLSVTPTNFEgGFPFTFSEAYSVGTPSIMSRIPVVQEVIDDPELQDLMtfNPLDVDDIANKMIFGLDNRQRLFEAQsSL 301
Cdd:cd03798  277 CDVFVLPSRHE-GFGLVLLEAMACGLPVVATDVGGIPEVVGDPETGLLV--PPGDADALAAALRRALAEPYLRELGE-AA 352

                        170       180
                 ....*....|....*....|....
gi 642985028 302 YAKLSAR-TWQVAANDYLSLLKSV 324
Cdd:cd03798  353 RARVAERfSWVKAADRIAAAYRDV 376
GT4_mannosyltransferase-like cd03822
mannosyltransferases of glycosyltransferase family 4 and similar proteins; This family is most ...
 89-322 4.14e-07

mannosyltransferases of glycosyltransferase family 4 and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.


Pssm-ID: 340849 [Multi-domain]  Cd Length: 370  Bit Score: 50.85  E-value: 4.14e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  89 DVPAEKITVIRHGfvdlgasgaailrqdaldTLHAFIKKNDGRMPEYLkgfrFDDVPFFFYSSQLRPHKNIEGLIRAYAK 168
Cdd:cd03822  154 LIPAVNIEVIPHG------------------VPEVPQDPTTALKRLLL----PEGKKVILTFGFIGPGKGLEILLEALPE 211

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 169 VLKEHQRPAKLIL------TAQFQYDKRIQTFIDDNGLHADV-LSLHSVPNKVLAALYHLASLSVTP-TNFEGGFPFTFS 240
Cdd:cd03822  212 LKAEFPDVRLVIAgelhpsLARYEGERYRKAAIEELGLQDHVdFHNNFLPEEEVPRYISAADVVVLPyLNTEQSSSGTLS 291

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 241 EAYSVGTPSIMSRIPVVQEVIDDPELQDLMTFNPLDVDDIANKmIFGLDNRQRLFEAQSSLYAKlsARTWQVAANDYLSL 320
Cdd:cd03822  292 YAIACGKPVISTPLRHAEELLADGRGVLVPFDDPSAIAEAILR-LLEDDERRQAIAERAYAYAR--AMTWESIADRYLRL 368


                 ..
gi 642985028 321 LK 322
Cdd:cd03822  369 FN 370
GT4_WbnK-like cd03807
Shigella dysenteriae WbnK and similar proteins; This family is most closely related to the GT4 ...
 72-297 8.59e-07

Shigella dysenteriae WbnK and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.


Pssm-ID: 340836 [Multi-domain]  Cd Length: 362  Bit Score: 50.01  E-value: 8.59e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  72 LVCYSENAKQKHFveRCDVPAEKITVIRHGF----VDLGASGAAILRQDALDTLHAFIKKNDGRmpeylkgfrfddvpff 147
Cdd:cd03807  137 TVANSSAVAEFHQ--EQGYAKNKIVVIYNGIdlfkLSPDDASRARARRRLGLAEDRRVIGIVGR---------------- 198

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 148 fyssqLRPHKNIEGLIRAYAKVLKEHQRpAKLILTAQFQYDKRIQTFIDDNGLHADVLSLHSVPNkvLAALYHLASLSVT 227
Cdd:cd03807  199 -----LHPVKDHSDLLRAAALLVETHPD-LRLLLVGRGPERPNLERLLLELGLEDRVHLLGERSD--VPALLPAMDIFVL 270

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 642985028 228 PTNFEgGFPFTFSEAYSVGTPSIMSRIPVVQEVIDDpelQDLMTFNPLDVDDIAN---KMIFGLDNRQRLFEA 297
Cdd:cd03807  271 SSRTE-GFPNALLEAMACGLPVVATDVGGAAELVDD---GTGFLVPAGDPQALADairALLEDPEKRARLGRA 339
Glycosyltransferase_GTB-type cd01635
glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases ...
 41-265 1.78e-06

glycosyltransferase family 1 and related proteins with GTB topology; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.


Pssm-ID: 340816 [Multi-domain]  Cd Length: 235  Bit Score: 48.17  E-value: 1.78e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  41 IVFFDYPGNFRGIREHNSydRMLKSLRSADHLVCYSENAKQKHFVERCDVPAEKITVIrHGFVDLGASGAAILRQDALD- 119
Cdd:cd01635    3 LVTGEYPPLRGGLELHVR--ALARALAALGHEVTVLALLLLALRRILKKLLELKPDVV-HAHSPHAAALAALLAARLLGi 79

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 120 ----TLHAFI--KKNDGRMPEYLKGFRFDDVPFFFYSSQLRPHKNIEGLIRAYAKVLKEHQrPAKLILTAQFQYDKRIQT 193
Cdd:cd01635   80 pivvTVHGPDslESTRSELLALARLLVSLPLADKVSVGRLVPEKGIDLLLEALALLKARLP-DLVLVLVGGGGEREEEEA 158

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 642985028 194 FIDDNGLHADVLSL-HSVPNKVLAALYHLASLSVTPTNFEgGFPFTFSEAYSVGTPSIMSRIPVVQEVIDDPE 265
Cdd:cd01635  159 LAAALGLLERVVIIgGLVDDEVLELLLAAADVFVLPSRSE-GFGLVLLEAMAAGKPVIATDVGGIPEFVVDGE 230
GT4_Bme6-like cd03821
Brucella melitensis Bme6 and similar proteins; This family is most closely related to the GT4 ...
 90-253 2.05e-06

Brucella melitensis Bme6 and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.


Pssm-ID: 340848 [Multi-domain]  Cd Length: 377  Bit Score: 48.90  E-value: 2.05e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  90 VPAEKITVIRHGfVDLgasgaailrqDALDTLHAFIKKndGRMPEylkgfrfdDVPFFFYSSQLRPHKNIEGLIRAYAKv 169
Cdd:cd03821  171 GLEPPIAVIPNG-VDI----------PEFDPGLRDRRK--HNGLE--------DRRIILFLGRIHPKKGLDLLIRAARK- 228

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 170 LKEHQRPAKLILTAQ-FQYDKRIQTFIDDNGLHADVLSLHSVPNKVLAALYHLASLSVTPTNFEgGFPFTFSEAYSVGTP 248
Cdd:cd03821  229 LAEQGRDWHLVIAGPdDGAYPAFLQLQSSLGLGDRVTFTGPLYGEAKWALYASADLFVLPSYSE-NFGNVVAEALACGLP 307


                 ....*
gi 642985028 249 SIMSR 253
Cdd:cd03821  308 VVITD 312
GT4_BshA-like cd04962
N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA and similar proteins; This family is most ...
 91-317 2.21e-06

N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA and similar proteins; This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes.


Pssm-ID: 340859 [Multi-domain]  Cd Length: 370  Bit Score: 48.89  E-value: 2.21e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  91 PAEKITVIrHGFVDLgasgAAILRQDALDTLHAFIKKNDGRMpeylkgfrfddvpfFFYSSQLRPHKNIEGLIRAYAKVL 170
Cdd:cd04962  162 VDKDIEVI-HNFIDE----DVFKRKPAGALKRRLLAPPDEKV--------------VIHVSNFRPVKRIDDVVRVFARVR 222

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 171 KEhqRPAKLILTAQFQYDKRIQTFIDDNGLHADVLSLHSVPNkvLAALYHLASLSVTPTNFEGgFPFTFSEAYSVGTPSI 250
Cdd:cd04962  223 RK--IPAKLLLVGDGPERVPAEELARELGVEDRVLFLGKQDD--VEELLSIADLFLLPSEKES-FGLAALEAMACGVPVV 297

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 642985028 251 MSRIPVVQEVIDDPElqDLMTFNPLDVDDIANKMIFGLDNRQrlfeaqssLYAKLSARTWQVAANDY 317
Cdd:cd04962  298 SSNAGGIPEVVKHGE--TGFLSDVGDVDAMAKSALSILEDDE--------LYNRMGRAARKRAAERF 354
GT4_CapM-like cd03808
capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins; This ...
 65-291 2.35e-06

capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. CapM in Staphylococcus aureus is required for the synthesis of type 1 capsular polysaccharides.


Pssm-ID: 340837 [Multi-domain]  Cd Length: 358  Bit Score: 48.75  E-value: 2.35e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028  65 SLRSADHLVCYSENAKQKhFVERCDVPAEKITVIRHGFVDLgasgaailrqdaldtlhafikKNDGRMPEYLKgfrfDDV 144
Cdd:cd03808  136 ALLFTDKVIFVNEDDRDL-AIKKGIIKKKKTVLIPGSGVDL---------------------DRFQYSPESLP----SEK 189

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 145 PFFFYSSQLRPHKNIEGLIRAyAKVLKEHQRPAKLILTAQFQYDKRIQTFIDDNGLHADVLSLHSVPNkvLAALYHLASL 224
Cdd:cd03808  190 VVFLFVARLLKDKGIDELIEA-AKILKKKGPNVRFLLVGDGELENPSEILIEKLGLEGRIEFLGFRSD--VPELLAESDV 266

                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 642985028 225 SVTPTNFEGgFPFTFSEAYSVGTPSIMSRIPVVQEVIDDPElqDLMTFNPLDVDDIANKMIFGLDNR 291
Cdd:cd03808  267 FVLPSYREG-LPRSLLEAMAAGRPVITTDVPGCRELVIDGV--NGFLVPPGDVEALADAIEKLIEDP 330
GT4_AmsD-like cd03820
amylovoran biosynthesis glycosyltransferase AmsD and similar proteins; This family is most ...
 153-286 1.16e-04

amylovoran biosynthesis glycosyltransferase AmsD and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.


Pssm-ID: 340847 [Multi-domain]  Cd Length: 351  Bit Score: 43.38  E-value: 1.16e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 153 LRPHKNIEGLIRAYAKVLKEHqrPA-KLILTAQFQYDKRIQTFIDDNGLHADVLSLHSVPNkvLAALYHLASLSVTPTNF 231
Cdd:cd03820  190 LTYQKGFDLLIEAWALIAKKH--PDwKLRIYGDGPEREELEKLIDKLGLEDRVKLLGPTKN--IAEEYANSSIFVLSSRY 265

                         90       100       110       120       130
                 ....*....|....*....|....*....|....*....|....*....|....*.
gi 642985028 232 EgGFPFTFSEAYSVGTPSIMSRIPV-VQEVIDDPElqDLMTFNPLDVDDIANKMIF 286
Cdd:cd03820  266 E-GFPMVLLEAMAYGLPIISFDCPTgPSEIIEDGE--NGLLVPNGDVDALAEALLR 318
PRK15484 PRK15484
lipopolysaccharide N-acetylglucosaminyltransferase;
148-323 4.84e-04

lipopolysaccharide N-acetylglucosaminyltransferase;


Pssm-ID: 185381 [Multi-domain]  Cd Length: 380  Bit Score: 41.31  E-value: 4.84e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 148 FYSSQLRPHKNIEGLIRAYAKVLKEHQRpAKLILTAQF---------QYDKRIQTFIDDNGLHADVLSlhSVPNKVLAAL 218
Cdd:PRK15484 197 LYAGRISPDKGILLLMQAFEKLATAHSN-LKLVVVGDPtasskgekaAYQKKVLEAAKRIGDRCIMLG--GQPPEKMHNY 273

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 219 YHLASLSVTPTNFEGGFPFTFSEAYSVGTPSIMSRIPVVQEVIDDPE----LQDLMTfnpldVDDIANKMIFGLDNRQRL 294
Cdd:PRK15484 274 YPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGItgyhLAEPMT-----SDSIISDINRTLADPELT 348

                        170       180
                 ....*....|....*....|....*....
gi 642985028 295 FEAQSSLYAKLSARTWQVAANDYLSLLKS 323
Cdd:PRK15484 349 QIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377
GT4_GtfA-like cd04949
accessory Sec system glycosyltransferase GtfA and similar proteins; This family is most ...
 149-304 7.19e-04

accessory Sec system glycosyltransferase GtfA and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria.


Pssm-ID: 340855 [Multi-domain]  Cd Length: 328  Bit Score: 40.75  E-value: 7.19e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 149 YSSQLRPHKNIEGLIRAYAKVLKehQRP-AKLILTAQFQYDKRIQTFIDDNGLhADVLSLHSVPNKvLAALYHLASLSVT 227
Cdd:cd04949  165 TISRLAPEKQLDHLIEAVAKAVK--KVPeITLDIYGYGEEREKLKKLIEELHL-EDNVFLKGYHSN-LDQEYQDAYLSLL 240

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 642985028 228 PTNFEgGFPFTFSEAYSVGTPSIMSRIPV-VQEVIDDPELQDLMTFNplDVDDIANKMIFGLDNRQRLFEAQSSLYAK 304
Cdd:cd04949  241 TSQME-GFGLTLMEAIGHGLPVVSYDVKYgPSELIEDGENGYLIEKN--NIDALADKIIELLNDPEKLQQFSEESYKI 315
Glyco_transf_4 pfam13439
Glycosyltransferase Family 4;
62-105 7.70e-03

Glycosyltransferase Family 4;


Pssm-ID: 463877 [Multi-domain]  Cd Length: 169  Bit Score: 36.74  E-value: 7.70e-03
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....
gi 642985028   62 MLKSLRSADHLVCYSENAKQkHFVERCDVPAEKITVIRHGfVDL 105
Cdd:pfam13439 127 ERRLLRRADRVIAVSEAVAD-ELRRLYGVPPEKIRVIPNG-VDL 168
GT4_ExpE7-like cd03823
glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 ...
 147-323 7.71e-03

glycosyltransferase ExpE7 and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).


Pssm-ID: 340850 [Multi-domain]  Cd Length: 357  Bit Score: 37.69  E-value: 7.71e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 147 FFYSSQLRPHKNIEGLIRAYAKVLKEhqrPAKLILTAQFQyDKRIQTFIDDNGLHAdvlsLHSVPNKVLAALYHLASLSV 226
Cdd:cd03823  194 FGYIGRLTEEKGIDLLVEAFKRLPRE---DIELVIAGHGP-LSDERQIEGGRRIAF----LGRVPTDDIKDFYEKIDVLV 265

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 227 TPTNFEGGFPFTFSEAYSVGTPSIMSRIPVVQEVIdDPELQDLmTFNPLDVDDIANKMIFGLDNRQRLFEAQSSLYAKLS 306
Cdd:cd03823  266 VPSIWPEPFGLVVREAIAAGLPVIASDLGGIAELI-QPGVNGL-LFAPGDAEDLAAAMRRLLTDPALLERLRAGAEPPRS 343

                        170
                 ....*....|....*..
gi 642985028 307 ARTwqvAANDYLSLLKS 323
Cdd:cd03823  344 TES---QAEEYLKLYRD 357
GT4_ExpC-like cd03818
Rhizobium meliloti ExpC and similar proteins; This family is most closely related to the GT4 ...
 210-293 9.39e-03

Rhizobium meliloti ExpC and similar proteins; This family is most closely related to the GT4 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).


Pssm-ID: 340845 [Multi-domain]  Cd Length: 396  Bit Score: 37.34  E-value: 9.39e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 642985028 210 VPNKVLAALYHLASLSVTPTnfeggFPFTFS----EAYSVGTPSIMSRIPVVQEVIDDPELQDLMTFnpLDVDDIANKMI 285
Cdd:cd03818  289 VPYDQYVRLLQLSDAHVYLT-----YPFVLSwsllEAMACGCPVIGSDTAPVREVIRDGRNGLLVDF--FDPDALAAAVL 361


                 ....*...
gi 642985028 286 FGLDNRQR 293
Cdd:cd03818  362 ELLEDPDR 369
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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