|
Name |
Accession |
Description |
Interval |
E-value |
| AcrA |
COG0845 |
Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope ... |
37-369 |
3.13e-92 |
|
Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms];
Pssm-ID: 440606 [Multi-domain] Cd Length: 324 Bit Score: 279.91 E-value: 3.13e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 37 KPVVRDVVDNDEFIGRFEPVDQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTALNEANAALEVAKSTLVYAE 116
Cdd:COG0845 2 KVERGDVPETVEATGTVEARREVEVRARVSGRVEEVLVDEGDRVKKGQVLARLDPPDLQAALAQAQAQLAAAQAQLELAK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 117 AQFKRAESLATSGSQSISILDDRRREWVSAQANVRGAQATADRAALDLEYTKITAPISGRIDRRLISVGNLVQADQSiLT 196
Cdd:COG0845 82 AELERYKALLKKGAVSQQELDQAKAALDQAQAALAAAQAALEQARANLAYTTIRAPFDGVVGERNVEPGQLVSAGTP-LF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 197 TIVSVDPIDFYFDVDERRLLNFAQtardrgvdlqqgggGVEVEVRITDSTEKPFKGKLDFAENRIDSETGTKRIRARFDN 276
Cdd:COG0845 161 TIADLDPLEVEFDVPESDLARLKV--------------GQPVTVTLDAGPGKTFEGKVTFIDPAVDPATRTVRVRAELPN 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 277 PNYVLQPGLFGRVSVEASNVYKAILVPDEAIGSDQNQRVVYVVGEDGTVTAKPVRPGPRLYGYRVIREGMDGNETIVING 356
Cdd:COG0845 227 PDGLLRPGMFVRVRIVLGERENALLVPASAVVRDGGGAYVFVVDADGKVERRPVTLGRRDGDQVEVLSGLKAGDRVVVSG 306
|
330
....*....|...
gi 647183917 357 LLRARPGSKVTPQ 369
Cdd:COG0845 307 LQRLRDGAKVRVV 319
|
|
| RND_mfp |
TIGR01730 |
RND family efflux transporter, MFP subunit; This model represents the MFP (membrane fusion ... |
33-369 |
1.43e-85 |
|
RND family efflux transporter, MFP subunit; This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273776 [Multi-domain] Cd Length: 322 Bit Score: 263.02 E-value: 1.43e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 33 VSVAKPVVRDVVDNDEFIGRFEPVDQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTALNEANAALEVAKSTL 112
Cdd:TIGR01730 1 VTVATVESETLANTLTFPGSLEAVDEADLAAEVAGKITKISVREGQKVKKGQVLARLDDDDYQLALQAALAQLAAAEAQL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 113 VYAEAQFKRAESLATSGSQSISILDDRRREWVSAQANVRGAQATADRAALDLEYTKITAPISGRIDRRLISVGNLVQADQ 192
Cdd:TIGR01730 81 ELAQRSFERAERLVKRNAVSQADLDDAKAAVEAAQADLEAAKASLASAQLNLRYTEIRAPFDGTIGRRLVEVGAYVTAGQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 193 SILtTIVSVDPIDFYFDVDERRLLNFAQtardrgvdlqqgggGVEVEVRITDSTEKPFKGKLDFAENRIDSETGTKRIRA 272
Cdd:TIGR01730 161 TLA-TIVDLDPLEADFSVPERDLPQLRR--------------GQTLTVELDALPGEEFKGKLRFIDPRVDSGTGTVRVRA 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 273 RFDNPNYVLQPGLFGRVSVEASNVYKAILVPDEAIGSDQNQRVVYVVGEDGTVTAKPVRPGPRLYGYRVIREGMDGNETI 352
Cdd:TIGR01730 226 TFPNPDGRLLPGMFGRVTISLKVRSSAIVVPTQAVIEDLNGKYVYVVKNDGKVSKRPVEVGLRNGGYVEIESGLKAGDQI 305
|
330
....*....|....*..
gi 647183917 353 VINGLLRARPGSKVTPQ 369
Cdd:TIGR01730 306 VTAGVVKLRDGAKVKVV 322
|
|
| PRK11556 |
PRK11556 |
MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit; |
18-385 |
5.69e-50 |
|
MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;
Pssm-ID: 183194 [Multi-domain] Cd Length: 415 Bit Score: 173.44 E-value: 5.69e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 18 PFASAVAQQPGSPPPVSVAKPVVRDVVDNDEFIGRFEPVDQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTA 97
Cdd:PRK11556 47 PAGGRRGMRSGPLAPVQAATATEQAVPRYLTGLGTVTAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPRPFKVA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 98 LNEANAALEVAKSTLVYAEAQFKRAESLATSGSQSISILDDRRREWVSAQANVRGAQATADRAALDLEYTKITAPISGRI 177
Cdd:PRK11556 127 LAQAQGQLAKDQATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEASVASAQLQLDYSRITAPISGRV 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 178 DRRLISVGNLVQA-DQSILTTIVSVDPIDFYFDVDERRLLNFAQTardrgvdlQQGGGGVEVEVRITDSTEKPFKGKLDF 256
Cdd:PRK11556 207 GLKQVDVGNQISSgDTTGIVVITQTHPIDLVFTLPESDIATVVQA--------QKAGKPLVVEAWDRTNSKKLSEGTLLS 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 257 AENRIDSETGTKRIRARFDNPNYVLQPGLFGRVSVEASNVYKAILVPDEAIGSDQNQRVVYVVGEDGTVTAKPVRPGPRL 336
Cdd:PRK11556 279 LDNQIDATTGTIKLKARFNNQDDALFPNQFVNARMLVDTLQNAVVIPTAALQMGNEGHFVWVLNDENKVSKHLVTPGIQD 358
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 647183917 337 YGYRVIREGMDGNETIVINGLLRARPGSKVtpQVVElPQSREEIAPEAA 385
Cdd:PRK11556 359 SQKVVISAGLSAGDRVVTDGIDRLTEGAKV--EVVE-PQSATTPEEKAT 404
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
48-353 |
8.91e-35 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 130.62 E-value: 8.91e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 48 EFIGRFEPV-DQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTALNEANAALEVAKSTLVYAEAQFKRAESLA 126
Cdd:pfam00529 9 EAPGRVVVSgNAKAVQPQVSGIVTRVLVKEGDRVKAGDVLFQLDPTDYQAALDSAEAQLAKAQAQVARLQAELDRLQALE 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 127 TSGSQSISILDDRRREWVSAQANVRGAQATADRAALDLEYTKITAPISGRIDRRLISVGNLVQADQ-SILTTIVSVDPId 205
Cdd:pfam00529 89 SELAISRQDYDGATAQLRAAQAAVKAAQAQLAQAQIDLARRRVLAPIGGISRESLVTAGALVAQAQaNLLATVAQLDQI- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 206 fYFDVDERRLLNFAQTARDR-GVDLQQGGGGVEVE---VRITDSTEK-PFKGKLDFAENRIDSETGTKRIRARFDNP-NY 279
Cdd:pfam00529 168 -YVQITQSAAENQAEVRSELsGAQLQIAEAEAELKlakLDLERTEIRaPVDGTVAFLSVTVDGGTVSAGLRLMFVVPeDN 246
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 647183917 280 VLQPGLFGRVSVEASNVYKAILVPDEAIGSDQNQRV-VYVVGEDGTVTAKPVRPGPRLYGYRVIREGMDGNETIV 353
Cdd:pfam00529 247 LLVPGMFVETQLDQVRVGQPVLIPFDAFPQTKTGRFtGVVVGISPDTGPVRVVVDKAQGPYYPLRIGLSAGALVR 321
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| AcrA |
COG0845 |
Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope ... |
37-369 |
3.13e-92 |
|
Multidrug efflux pump subunit AcrA (membrane-fusion protein) [Cell wall/membrane/envelope biogenesis, Defense mechanisms];
Pssm-ID: 440606 [Multi-domain] Cd Length: 324 Bit Score: 279.91 E-value: 3.13e-92
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 37 KPVVRDVVDNDEFIGRFEPVDQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTALNEANAALEVAKSTLVYAE 116
Cdd:COG0845 2 KVERGDVPETVEATGTVEARREVEVRARVSGRVEEVLVDEGDRVKKGQVLARLDPPDLQAALAQAQAQLAAAQAQLELAK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 117 AQFKRAESLATSGSQSISILDDRRREWVSAQANVRGAQATADRAALDLEYTKITAPISGRIDRRLISVGNLVQADQSiLT 196
Cdd:COG0845 82 AELERYKALLKKGAVSQQELDQAKAALDQAQAALAAAQAALEQARANLAYTTIRAPFDGVVGERNVEPGQLVSAGTP-LF 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 197 TIVSVDPIDFYFDVDERRLLNFAQtardrgvdlqqgggGVEVEVRITDSTEKPFKGKLDFAENRIDSETGTKRIRARFDN 276
Cdd:COG0845 161 TIADLDPLEVEFDVPESDLARLKV--------------GQPVTVTLDAGPGKTFEGKVTFIDPAVDPATRTVRVRAELPN 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 277 PNYVLQPGLFGRVSVEASNVYKAILVPDEAIGSDQNQRVVYVVGEDGTVTAKPVRPGPRLYGYRVIREGMDGNETIVING 356
Cdd:COG0845 227 PDGLLRPGMFVRVRIVLGERENALLVPASAVVRDGGGAYVFVVDADGKVERRPVTLGRRDGDQVEVLSGLKAGDRVVVSG 306
|
330
....*....|...
gi 647183917 357 LLRARPGSKVTPQ 369
Cdd:COG0845 307 LQRLRDGAKVRVV 319
|
|
| RND_mfp |
TIGR01730 |
RND family efflux transporter, MFP subunit; This model represents the MFP (membrane fusion ... |
33-369 |
1.43e-85 |
|
RND family efflux transporter, MFP subunit; This model represents the MFP (membrane fusion protein) component of the RND family of transporters. RND refers to Resistance, Nodulation, and cell Division. It is, in part, a subfamily of pfam00529 (Pfam release 7.5) but hits substantial numbers of proteins missed by that model. The related HlyD secretion protein, for which pfam00529 is named, is outside the scope of this model. Attributed functions imply outward transport. These functions include nodulation, acriflavin resistance, heavy metal efflux, and multidrug resistance proteins. Most members of this family are found in Gram-negative bacteria. The proposed function of MFP proteins is to bring the inner and outer membranes together and enable transport to the outside of the outer membrane. Note, however, that a few members of this family are found in Gram-positive bacteria, where there is no outer membrane. [Transport and binding proteins, Unknown substrate]
Pssm-ID: 273776 [Multi-domain] Cd Length: 322 Bit Score: 263.02 E-value: 1.43e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 33 VSVAKPVVRDVVDNDEFIGRFEPVDQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTALNEANAALEVAKSTL 112
Cdd:TIGR01730 1 VTVATVESETLANTLTFPGSLEAVDEADLAAEVAGKITKISVREGQKVKKGQVLARLDDDDYQLALQAALAQLAAAEAQL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 113 VYAEAQFKRAESLATSGSQSISILDDRRREWVSAQANVRGAQATADRAALDLEYTKITAPISGRIDRRLISVGNLVQADQ 192
Cdd:TIGR01730 81 ELAQRSFERAERLVKRNAVSQADLDDAKAAVEAAQADLEAAKASLASAQLNLRYTEIRAPFDGTIGRRLVEVGAYVTAGQ 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 193 SILtTIVSVDPIDFYFDVDERRLLNFAQtardrgvdlqqgggGVEVEVRITDSTEKPFKGKLDFAENRIDSETGTKRIRA 272
Cdd:TIGR01730 161 TLA-TIVDLDPLEADFSVPERDLPQLRR--------------GQTLTVELDALPGEEFKGKLRFIDPRVDSGTGTVRVRA 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 273 RFDNPNYVLQPGLFGRVSVEASNVYKAILVPDEAIGSDQNQRVVYVVGEDGTVTAKPVRPGPRLYGYRVIREGMDGNETI 352
Cdd:TIGR01730 226 TFPNPDGRLLPGMFGRVTISLKVRSSAIVVPTQAVIEDLNGKYVYVVKNDGKVSKRPVEVGLRNGGYVEIESGLKAGDQI 305
|
330
....*....|....*..
gi 647183917 353 VINGLLRARPGSKVTPQ 369
Cdd:TIGR01730 306 VTAGVVKLRDGAKVKVV 322
|
|
| PRK11556 |
PRK11556 |
MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit; |
18-385 |
5.69e-50 |
|
MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit;
Pssm-ID: 183194 [Multi-domain] Cd Length: 415 Bit Score: 173.44 E-value: 5.69e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 18 PFASAVAQQPGSPPPVSVAKPVVRDVVDNDEFIGRFEPVDQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTA 97
Cdd:PRK11556 47 PAGGRRGMRSGPLAPVQAATATEQAVPRYLTGLGTVTAANTVTVRSRVDGQLMALHFQEGQQVKAGDLLAEIDPRPFKVA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 98 LNEANAALEVAKSTLVYAEAQFKRAESLATSGSQSISILDDRRREWVSAQANVRGAQATADRAALDLEYTKITAPISGRI 177
Cdd:PRK11556 127 LAQAQGQLAKDQATLANARRDLARYQQLAKTNLVSRQELDAQQALVSETEGTIKADEASVASAQLQLDYSRITAPISGRV 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 178 DRRLISVGNLVQA-DQSILTTIVSVDPIDFYFDVDERRLLNFAQTardrgvdlQQGGGGVEVEVRITDSTEKPFKGKLDF 256
Cdd:PRK11556 207 GLKQVDVGNQISSgDTTGIVVITQTHPIDLVFTLPESDIATVVQA--------QKAGKPLVVEAWDRTNSKKLSEGTLLS 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 257 AENRIDSETGTKRIRARFDNPNYVLQPGLFGRVSVEASNVYKAILVPDEAIGSDQNQRVVYVVGEDGTVTAKPVRPGPRL 336
Cdd:PRK11556 279 LDNQIDATTGTIKLKARFNNQDDALFPNQFVNARMLVDTLQNAVVIPTAALQMGNEGHFVWVLNDENKVSKHLVTPGIQD 358
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 647183917 337 YGYRVIREGMDGNETIVINGLLRARPGSKVtpQVVElPQSREEIAPEAA 385
Cdd:PRK11556 359 SQKVVISAGLSAGDRVVTDGIDRLTEGAKV--EVVE-PQSATTPEEKAT 404
|
|
| PRK09578 |
PRK09578 |
MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit; |
27-376 |
2.78e-43 |
|
MexX/AxyX family multidrug efflux RND transporter periplasmic adaptor subunit;
Pssm-ID: 169982 [Multi-domain] Cd Length: 385 Bit Score: 154.95 E-value: 2.78e-43
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 27 PGSPPPVSVAKPVVRDVVDNDEFIGRFEPVDQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTALNEANAALE 106
Cdd:PRK09578 32 AAAPREATVVTVRPTSVPMTVELPGRLDAYRQAEVRARVAGIVTARTYEEGQEVKQGAVLFRIDPAPLKAARDAAAGALA 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 107 VAKSTLVYAEAQFKRAESLATSGSQSISILDDRRREWVSAQANVRGAQATADRAALDLEYTKITAPISGRIDRRLISVGN 186
Cdd:PRK09578 112 KAEAAHLAALDKRRRYDDLVRDRAVSERDYTEAVADERQAKAAVASAKAELARAQLQLDYATVTAPIDGRARRALVTEGA 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 187 LVQADQSI-LTTIVSVDPIdfyfdvderrLLNFAQTARD-----RGVDLQQGGG----GVEVEVRITDSTEKPFKGKLDF 256
Cdd:PRK09578 192 LVGQDQATpLTTVEQLDPI----------YVNFSQPAADvealrRAVKSGRATGiaqqDVAVTLVRADGSEYPLKGKLLF 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 257 AENRIDSETGTKRIRARFDNPNYVLQPGLFGRVSVEASNVYKAILVPDEAIGSDQNQRVVYVVGEDGTVTAKPVRPGPRL 336
Cdd:PRK09578 262 SDLAVDPTTDTVAMRALFPNPERELLPGAYVRIALDRAVNPRAILVPRDALLRTADSASVKVVGQNGKVRDVEVEADQMS 341
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 647183917 337 YGYRVIREGMDGNETIVINGLLRARPGSKVTPqVVELPQS 376
Cdd:PRK09578 342 GRDWIVTRGLAGGERVIVDNAAQFAPGTAVKA-VERAPAA 380
|
|
| PRK09859 |
PRK09859 |
multidrug transporter subunit MdtE; |
13-365 |
6.83e-41 |
|
multidrug transporter subunit MdtE;
Pssm-ID: 137559 [Multi-domain] Cd Length: 385 Bit Score: 148.71 E-value: 6.83e-41
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 13 TLTFLPFASAVAQQPGSpppVSVAKpvvrdvvdndEFIGRFEPVDQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQR 92
Cdd:PRK09859 29 AAAMTPEVGVVTLSPGS---VNVLS----------ELPGRTVPYEVAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPA 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 93 PFVTALNEANAALEVAKSTLVYAEAQFKRAESLATSGSQSISILDDRRREWVSAQANVRGAQATADRAALDLEYTKITAP 172
Cdd:PRK09859 96 PLQAELNSAKGSLAKALSTASNARITFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAVEQATINLQYANVTSP 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 173 ISGRIDRRLISVGNLVQADQS-ILTTIVSVDPIdfYFDVDErRLLNFAQTARDRGV-DLQQGGGGVEVEVRITDSTEKPF 250
Cdd:PRK09859 176 ITGVSGKSSVTVGALVTANQAdSLVTVQRLDPI--YVDLTQ-SVQDFLRMKEEVASgQIKQVQGSTPVQLNLENGKRYSQ 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 251 KGKLDFAENRIDSETGTKRIRARFDNPNYVLQPGLFGRVSVEASNVYKAILVPDEAIGSD-QNQRVVYVVGEDGTVTAKP 329
Cdd:PRK09859 253 TGTLKFSDPTVDETTGSVTLRAIFPNPNGDLLPGMYVTALVDEGSRQNVLLVPQEGVTHNaQGKATALILDKDDVVQLRE 332
|
330 340 350
....*....|....*....|....*....|....*.
gi 647183917 330 VRPGPRLYGYRVIREGMDGNETIVINGLLRARPGSK 365
Cdd:PRK09859 333 IEASKAIGDQWVVTSGLQAGDRVIVSGLQRIRPGIK 368
|
|
| PRK15030 |
PRK15030 |
multidrug efflux RND transporter periplasmic adaptor subunit AcrA; |
8-391 |
2.87e-40 |
|
multidrug efflux RND transporter periplasmic adaptor subunit AcrA;
Pssm-ID: 184990 [Multi-domain] Cd Length: 397 Bit Score: 147.17 E-value: 2.87e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 8 LLTIGTLTFLPFASAVAQQPGSP-PPVSVAKPVVRDVVDNDEFIGRFEPVDQVSVRSRIGGYLQEVHFTDGALVKQGDLL 86
Cdd:PRK15030 14 LMLSGSLALTGCDDKQAQQGGQQmPAVGVVTVKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSL 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 87 FVIDQRPFVTALNEANAALEVAKSTLVYAEAQFKRAESLAtsGSQSISILDDRRREWVSAQAN--VRGAQATADRAALDL 164
Cdd:PRK15030 94 YQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLL--GTQYISKQEYDQALADAQQANaaVTAAKAAVETARINL 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 165 EYTKITAPISGRIDRRLISVGNLVQADQ-SILTTIVSVDPIdfYFDVDERR--LLNFAQTARDRgvDLQQGGGGVEVEVR 241
Cdd:PRK15030 172 AYTKVTSPISGRIGKSNVTEGALVQNGQaTALATVQQLDPI--YVDVTQSSndFLRLKQELANG--TLKQENGKAKVSLI 247
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 242 ITDSTEKPFKGKLDFAENRIDSETGTKRIRARFDNPNYVLQPGLFGRVSVEASNVYKAILVPDEAIG-SDQNQRVVYVVG 320
Cdd:PRK15030 248 TSDGIKFPQDGTLEFSDVTVDQTTGSITLRAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTrTPRGDATVLVVG 327
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 647183917 321 EDGTVTAKPVRPGPRLYGYRVIREGMDGNETIVINGLLRARPGSKVTPQvvELPQSREEIAPEAAGLELSR 391
Cdd:PRK15030 328 ADDKVETRPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQ--EVTADNNQQAASGAQPEQSK 396
|
|
| CusB_dom_1 |
pfam00529 |
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli ... |
48-353 |
8.91e-35 |
|
Cation efflux system protein CusB domain 1; The cation efflux system protein CusB from E. coli can be divided into four different domains, the first three domains of the protein are mostly beta-strands and the fourth forms an all alpha-helical domain. This entry represents the first beta-domain (domain 1) of CusB and it is formed by the N and C-terminal ends of the polypeptide (residues 89-102 and 324-385). CusB is part of the copper-transporting efflux system CusCFBA. This domain can also be found in other membrane-fusion proteins, such as HlyD, MdtN, MdtE and AaeA. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
Pssm-ID: 425733 [Multi-domain] Cd Length: 322 Bit Score: 130.62 E-value: 8.91e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 48 EFIGRFEPV-DQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTALNEANAALEVAKSTLVYAEAQFKRAESLA 126
Cdd:pfam00529 9 EAPGRVVVSgNAKAVQPQVSGIVTRVLVKEGDRVKAGDVLFQLDPTDYQAALDSAEAQLAKAQAQVARLQAELDRLQALE 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 127 TSGSQSISILDDRRREWVSAQANVRGAQATADRAALDLEYTKITAPISGRIDRRLISVGNLVQADQ-SILTTIVSVDPId 205
Cdd:pfam00529 89 SELAISRQDYDGATAQLRAAQAAVKAAQAQLAQAQIDLARRRVLAPIGGISRESLVTAGALVAQAQaNLLATVAQLDQI- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 206 fYFDVDERRLLNFAQTARDR-GVDLQQGGGGVEVE---VRITDSTEK-PFKGKLDFAENRIDSETGTKRIRARFDNP-NY 279
Cdd:pfam00529 168 -YVQITQSAAENQAEVRSELsGAQLQIAEAEAELKlakLDLERTEIRaPVDGTVAFLSVTVDGGTVSAGLRLMFVVPeDN 246
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 647183917 280 VLQPGLFGRVSVEASNVYKAILVPDEAIGSDQNQRV-VYVVGEDGTVTAKPVRPGPRLYGYRVIREGMDGNETIV 353
Cdd:pfam00529 247 LLVPGMFVETQLDQVRVGQPVLIPFDAFPQTKTGRFtGVVVGISPDTGPVRVVVDKAQGPYYPLRIGLSAGALVR 321
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
55-292 |
2.10e-28 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 113.60 E-value: 2.10e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 55 PVDQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTALNEANAALEV--------------------------- 107
Cdd:COG1566 42 EARVVTVAAKVSGRVTEVLVKEGDRVKKGQVLARLDPTDLQAALAQAEAQLAAaeaqlarleaelgaeaeiaaaeaqlaa 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 108 AKSTLVYAEAQFKRAESLATSGSQSISILDDRRREWVSAQAN---------------------------VRGAQATADRA 160
Cdd:COG1566 122 AQAQLDLAQRELERYQALYKKGAVSQQELDEARAALDAAQAQleaaqaqlaqaqaglreeeelaaaqaqVAQAEAALAQA 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 161 ALDLEYTKITAPISGRIDRRLISVGNLVQADQSILtTIVSVDPIDFYFDVDERRLLNFAQtardrgvdlqqgggGVEVEV 240
Cdd:COG1566 202 ELNLARTTIRAPVDGVVTNLNVEPGEVVSAGQPLL-TIVPLDDLWVEAYVPETDLGRVKP--------------GQPVEV 266
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 647183917 241 RITDSTEKPFKGKLDFAENRIDSETGTK----------RIRARFDNPN-YVLQPGLFGRVSVE 292
Cdd:COG1566 267 RVDAYPDRVFEGKVTSISPGAGFTSPPKnatgnvvqryPVRIRLDNPDpEPLRPGMSATVEID 329
|
|
| PRK03598 |
PRK03598 |
putative efflux pump membrane fusion protein; Provisional |
56-256 |
4.91e-15 |
|
putative efflux pump membrane fusion protein; Provisional
Pssm-ID: 235136 [Multi-domain] Cd Length: 331 Bit Score: 75.38 E-value: 4.91e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 56 VD--QVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTALNEANAALEVAKSTL--------------------- 112
Cdd:PRK03598 39 VDirTVNLGFRVGGRLASLAVDEGDAVKAGQVLGELDAAPYENALMQAKANVSVAQAQLdlmlagyrdeeiaqaraavkq 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 113 -----VYAEAQFKRAESLATSGSQSISILDD--------------------------RRREWVSAQANVRGAQATADRAA 161
Cdd:PRK03598 119 aqaayDYAQNFYNRQQGLWKSRTISANDLENarssrdqaqatlksaqdklsqyregnRPQDIAQAKASLAQAQAALAQAE 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 162 LDLEYTKITAPISGRIDRRLISVGNLVQADQSILTtiVSVD-PIDFYFDVDERrllnfaqtardrgvDLQQGGGGVEVEV 240
Cdd:PRK03598 199 LNLQDTELIAPSDGTILTRAVEPGTMLNAGSTVFT--LSLTrPVWVRAYVDER--------------NLGQAQPGRKVLL 262
|
250
....*....|....*..
gi 647183917 241 RiTDST-EKPFKGKLDF 256
Cdd:PRK03598 263 Y-TDGRpDKPYHGQIGF 278
|
|
| PRK10476 |
PRK10476 |
multidrug transporter subunit MdtN; |
57-255 |
1.02e-12 |
|
multidrug transporter subunit MdtN;
Pssm-ID: 182488 [Multi-domain] Cd Length: 346 Bit Score: 68.51 E-value: 1.02e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 57 DQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTALNEANAALEVAKSTL--------------VYAEAQFKRA 122
Cdd:PRK10476 47 DVVHVASEVGGRIVELAVTENQAVKKGDLLFRIDPRPYELTVAQAQADLALADAQImttqrsvdaersnaASANEQVERA 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 123 --------------ESLATSGSQSISILDDRR--------------REWVSAQ----------ANVRGAQATADRAALDL 164
Cdd:PRK10476 127 ranaklatrtlerlEPLLAKGYVSAQQVDQARtaqrdaevslnqalLQAQAAAaavggvdalvAQRAAREAALAIAELHL 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 165 EYTKITAPISGRIDRRLISVGNLVQADQSILTTIvsvdpidfyfDVDERrllnFAqTARDRGVDLQQGGGGVEVEVRITD 244
Cdd:PRK10476 207 EDTTVRAPFDGRVVGLKVSVGEFAAPMQPIFTLI----------DTDHW----YA-IANFRETDLKNIRVGDCATVYSMI 271
|
250
....*....|.
gi 647183917 245 STEKPFKGKLD 255
Cdd:PRK10476 272 DRGRPFEGKVD 282
|
|
| PRK11578 |
PRK11578 |
macrolide transporter subunit MacA; Provisional |
8-364 |
6.32e-11 |
|
macrolide transporter subunit MacA; Provisional
Pssm-ID: 183211 [Multi-domain] Cd Length: 370 Bit Score: 63.25 E-value: 6.32e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 8 LLTIGTLTFLPFASAVAqqpgspPPVSVAKPVVRDVVDNDEFIGRFEPVDQVSVRSRIGGYLQEVHFTDGALVKQGDLLF 87
Cdd:PRK11578 17 IVLAGGITLWRILNAPV------PTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLG 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 88 VIDQRP-------FVTALNEANAALEVAKSTLVYAEAQFKRAESLATSGSQSISILDDRRREWVSAQANV-------RGA 153
Cdd:PRK11578 91 VIDPEQaenqikeVEATLMELRAQRQQAEAELKLARVTLSRQQRLAKTQAVSQQDLDTAATELAVKQAQIgtidaqiKRN 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 154 QATADRAALDLEYTKITAPISGRIDRRLISVGNLVQADQ---SILTTivsvdpidfyfdVDERRLLNFAQTARDRGVDLQ 230
Cdd:PRK11578 171 QASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQqapNILTL------------ADMSTMLVKAQVSEADVIHLK 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 231 QgggGVEVEVRITDSTEKPFKGKLDFAENRIDSETGTKRIRARFD--NPNYVLQPGLFGRVSVEASNVYKAILVPDEAIG 308
Cdd:PRK11578 239 P---GQKAWFTVLGDPLTRYEGVLKDILPTPEKVNDAIFYYARFEvpNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALG 315
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 647183917 309 S--DQNQRVVYVVgEDGTVTAKPVRPGPRLYGYRVIREGMDGNETIVINgllRARPGS 364
Cdd:PRK11578 316 DpvGDNRYKVKLL-RNGETREREVTIGARNDTDVEIVKGLEAGDEVIIG---EAKPGA 369
|
|
| PRK10559 |
PRK10559 |
p-hydroxybenzoic acid efflux pump subunit AaeA; |
57-175 |
3.61e-10 |
|
p-hydroxybenzoic acid efflux pump subunit AaeA;
Pssm-ID: 182548 [Multi-domain] Cd Length: 310 Bit Score: 60.52 E-value: 3.61e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 57 DQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTALNEANAalEVAKSTLVYAEaqfKRAES--LATSGSQSIS 134
Cdd:PRK10559 46 DVVAIAPDVSGLITQVNVHDNQLVKKGQVLFTIDQPRYQKALAEAEA--DVAYYQVLAQE---KRREAgrRNRLGVQAMS 120
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 647183917 135 --ILDDRRREWVSAQANVRGAQATADRAALDLEYTKITAPISG 175
Cdd:PRK10559 121 reEIDQANNVLQTVLHQLAKAQATRDLAKLDLERTVIRAPADG 163
|
|
| HlyD_D23 |
pfam16576 |
Barrel-sandwich domain of CusB or HlyD membrane-fusion; HlyD_D23 is the combined domains 2 and ... |
57-286 |
5.39e-10 |
|
Barrel-sandwich domain of CusB or HlyD membrane-fusion; HlyD_D23 is the combined domains 2 and 3 of the membrane-fusion proteins CusB and HlyD, which forms a barrel-sandwich. CusB and HlyD proteins are membrane fusion proteins of the CusCFBA copper efflux system in E.coli and related bacteria. The whole molecule hinges between D2 and D3. Efflux systems of this resistance-nodulation-division group - RND - have been developed to excrete poisonous metal ions, and in E.coli the only one that deals with silver and copper is the CusA transporter. The transporter CusA works in conjunction with a periplasmic component that is a membrane fusion protein, eg CusB, and an outer-membrane channel component CusC in a CusABC complex driven by import of protons.
Pssm-ID: 435440 [Multi-domain] Cd Length: 214 Bit Score: 58.67 E-value: 5.39e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 57 DQVSVRSRIGGYLQEVHF-TDGALVKQGDLLFVID-------QRPFVTALNEANAAlevAKSTLVYAEAQfkRAESLATS 128
Cdd:pfam16576 18 RLAHVHARVEGWIEKLYVnATGDPVKKGQPLAELYspelvaaQQEYLLALRSGDAL---SKSELLRAARQ--RLRLLGMP 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 129 GSQsISILDDRRRewvsAQANVRgaqatadraaldleytkITAPISGRIDRRLISVGNLVQADQSILTtIVSVDPIDFYF 208
Cdd:pfam16576 93 EAQ-IAELERTGK----VQPTVT-----------------VYAPISGVVTELNVREGMYVQPGDTLFT-IADLSTVWVEA 149
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 647183917 209 DVDERrllnfaqtardrgvDLQQGGGGVEVEVRITDSTEKPFKGKLDFAENRIDSETGTKRIRARFDNPNYVLQPGLF 286
Cdd:pfam16576 150 DVPEQ--------------DLALVKVGQPAEVTLPALPGKTFEGKVDYIYPTLDPKTRTVRVRIELPNPDGRLKPGMF 213
|
|
| Biotin_lipoyl_2 |
pfam13533 |
Biotin-lipoyl like; |
57-106 |
5.42e-08 |
|
Biotin-lipoyl like;
Pssm-ID: 433286 Cd Length: 50 Bit Score: 48.98 E-value: 5.42e-08
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|
gi 647183917 57 DQVSVRSRIGGYLQEVHFTDGALVKQGDLLFVIDQRPFVTALNEANAALE 106
Cdd:pfam13533 1 PVVKIASPVSGKVVAVNVKEGQQVKKGDVLATLDSPELQLQLQQAEAQLA 50
|
|
| HlyD_3 |
pfam13437 |
HlyD family secretion protein; This is a family of largely bacterial haemolysin translocator ... |
168-278 |
2.79e-04 |
|
HlyD family secretion protein; This is a family of largely bacterial haemolysin translocator HlyD proteins.
Pssm-ID: 433206 [Multi-domain] Cd Length: 104 Bit Score: 40.04 E-value: 2.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 168 KITAPISGRIDRRLISVGNLVQADQSILtTIVSVDPIDFYFDVDERrllnfaqtardrgvDLQQGGGGVEVEVRITDSTE 247
Cdd:pfam13437 1 TIRAPVDGVVAELNVEEGQVVQAGDPLA-TIVPPDRLLVEAFVPAA--------------DLGSLKKGQKVTLKLDPGSD 65
|
90 100 110
....*....|....*....|....*....|.
gi 647183917 248 KPFKGKLDFAENRIDSETGTKRIRARFDNPN 278
Cdd:pfam13437 66 YTLEGKVVRISPTVDPDTGVIPVRVSIENPK 96
|
|
| PRK09783 |
PRK09783 |
copper/silver efflux system membrane fusion protein CusB; Provisional |
142-357 |
3.60e-04 |
|
copper/silver efflux system membrane fusion protein CusB; Provisional
Pssm-ID: 236625 [Multi-domain] Cd Length: 409 Bit Score: 42.55 E-value: 3.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 142 EWVSAQAN---VRGAQATADRAALDLEYTKITAPISGRIdRRLISVgnlvQADQSILTTIVSVDPIDFYFDVdeRRLLNF 218
Cdd:PRK09783 159 DWVEAQSEyllLRETGGTATQTEGILERLRLAGMPEADI-RRLIAT----RKIQTRFTLKAPIDGVITAFDL--RAGMNI 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 647183917 219 AqtaRDRGVDLQQGGGGVEVEVRITDSTEKPFKGKLDFAEN------------------RIDSETGTKRIRARFDNPNYV 280
Cdd:PRK09783 232 A---KDNVVAKIQGMDPVWVTAAIPESIAWLVKDASQFTLTvparpdktftirkwtllpSVDAATRTLQLRLEVDNADEA 308
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 647183917 281 LQPGLFGRVSVEASNvYKAILVPDEA-IGSDQNQRVVyVVGEDGTVTAKPVRPGPRLYGYRVIREGMDGNETIVINGL 357
Cdd:PRK09783 309 LKPGMNAWLQLNTAS-EPMLLIPSQAlIDTGSEQRVI-TVDADGRFVPKRVAVFQESQGVTAIRSGLAEGEKVVSSGL 384
|
|
| |
