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preprotein translocase subunit SecY [Oligella urethralis]
Protein Classification
preprotein translocase subunit SecY ( domain architecture ID 11415179 )
preprotein translocase subunit SecY plays an essential role to facilitate protein translocation; it is a component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA
List of domain hits
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
13-431
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 668.32
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 13 A K YGD L M KRILF LVTA L V V F RLG T HIPVPGI N P NVMKD LFA T Q AD G I LG FF NMFSGGALSRFS V FALGIMPYI SS SIIMQ 92
Cdd:COG0201 9 F K IPE L R KRILF TLGI L I V Y RLG S HIPVPGI D P AALAQ LFA Q Q SG G L LG LL NMFSGGALSRFS I FALGIMPYI TA SIIMQ 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 93 L M T A V V P S LE A L K KEGE S GR R KITQYTRY G TV L LAL F Q S FGIA SFIQN --- FE GLV FT PG AM F VFT TV VS L VT GT V FLMW 169
Cdd:COG0201 89 L L T V V I P K LE E L Q KEGE E GR K KITQYTRY L TV V LAL L Q A FGIA LGLRS gpp GG GLV ID PG IL F YLL TV IT L TA GT M FLMW 168
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 170 LGEQITERG L GNGIS IL IFAGIVA EM P T A VSNM F D LV SNNQI S TIAA L AIFAIVVVIT AFVVFVE R AQRRI T V N YAKR Q V 249
Cdd:COG0201 169 LGEQITERG I GNGIS LI IFAGIVA RL P S A LAQI F E LV RTGEL S ILLL L LLLVLALAVI AFVVFVE Q AQRRI P V Q YAKR V V 248
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 250 G NKI YGGQS SH LPLK L NMAGVIP A IFASS II LFPATIA S FF SQANE ir WL SDLSAA L Q PG Q PLYI TVFTA LIIFF CF FYT 329
Cdd:COG0201 249 G RRM YGGQS TY LPLK V NMAGVIP I IFASS LL LFPATIA Q FF GGSSG -- WL QWIANY L S PG S PLYI VLYAL LIIFF TY FYT 326
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 330 A LV FN SR E T ADNLK R SG A FIPGIRPG RQ T SQ Y I DK I L M RLTLVGAI YIT L VCLV PE F L RMQW q NI PFYFGGTSLLI I V V V 409
Cdd:COG0201 327 A IT FN PE E I ADNLK K SG G FIPGIRPG KP T AE Y L DK V L T RLTLVGAI FLA L IAIL PE I L GAIT - GV PFYFGGTSLLI V V G V 405
410 420
....*....|....*....|..
gi 648464965 410 SM D F M A Q VQTY L MSQQ Y DSL LK 431
Cdd:COG0201 406 AL D T M K Q IESQ L LMRH Y EGF LK 427
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
13-431
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 668.32
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 13 A K YGD L M KRILF LVTA L V V F RLG T HIPVPGI N P NVMKD LFA T Q AD G I LG FF NMFSGGALSRFS V FALGIMPYI SS SIIMQ 92
Cdd:COG0201 9 F K IPE L R KRILF TLGI L I V Y RLG S HIPVPGI D P AALAQ LFA Q Q SG G L LG LL NMFSGGALSRFS I FALGIMPYI TA SIIMQ 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 93 L M T A V V P S LE A L K KEGE S GR R KITQYTRY G TV L LAL F Q S FGIA SFIQN --- FE GLV FT PG AM F VFT TV VS L VT GT V FLMW 169
Cdd:COG0201 89 L L T V V I P K LE E L Q KEGE E GR K KITQYTRY L TV V LAL L Q A FGIA LGLRS gpp GG GLV ID PG IL F YLL TV IT L TA GT M FLMW 168
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 170 LGEQITERG L GNGIS IL IFAGIVA EM P T A VSNM F D LV SNNQI S TIAA L AIFAIVVVIT AFVVFVE R AQRRI T V N YAKR Q V 249
Cdd:COG0201 169 LGEQITERG I GNGIS LI IFAGIVA RL P S A LAQI F E LV RTGEL S ILLL L LLLVLALAVI AFVVFVE Q AQRRI P V Q YAKR V V 248
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 250 G NKI YGGQS SH LPLK L NMAGVIP A IFASS II LFPATIA S FF SQANE ir WL SDLSAA L Q PG Q PLYI TVFTA LIIFF CF FYT 329
Cdd:COG0201 249 G RRM YGGQS TY LPLK V NMAGVIP I IFASS LL LFPATIA Q FF GGSSG -- WL QWIANY L S PG S PLYI VLYAL LIIFF TY FYT 326
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 330 A LV FN SR E T ADNLK R SG A FIPGIRPG RQ T SQ Y I DK I L M RLTLVGAI YIT L VCLV PE F L RMQW q NI PFYFGGTSLLI I V V V 409
Cdd:COG0201 327 A IT FN PE E I ADNLK K SG G FIPGIRPG KP T AE Y L DK V L T RLTLVGAI FLA L IAIL PE I L GAIT - GV PFYFGGTSLLI V V G V 405
410 420
....*....|....*....|..
gi 648464965 410 SM D F M A Q VQTY L MSQQ Y DSL LK 431
Cdd:COG0201 406 AL D T M K Q IESQ L LMRH Y EGF LK 427
SecY
pfam00344 SecY;
75-414
6.39e-147
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 421.08
E-value: 6.39e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 75 S V FALGIMPYI SS SIIMQL MT a VV P SLE A LKKEGE S GR R KI T QYTRY G TV L LAL F Q SF GI ASFI qnfeg L V FTP G AM F VF 154
Cdd:pfam00344 1 S L FALGIMPYI TA SIIMQL LG - VV I SLE E LKKEGE E GR K KI N QYTRY L TV V LAL I Q AI GI VLSL ----- G V YGG G GG F YL 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 155 TT V VS L VT GT V FLMWLGEQIT ER G L GNGIS IL IFAGIVA EM P T A V S NM - FD L VSNNQI S TIAA L AIFA I VVVIT A F VV FV 233
Cdd:pfam00344 75 LI V LQ L TA GT M FLMWLGEQIT KY G I GNGIS LI IFAGIVA RL P S A F S GA l IA L FRLGAR S ILPN L LLLI I TLAVI A L VV YL 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 234 ER A Q RRI T V N YAKR Q VG nkiyg GQSS H LPLKLN M AGVIP A IFASS IIL FPATIA S FF S qaneirw L SDLS AAL Q PG Q PLY 313
Cdd:pfam00344 155 QQ A E RRI P V Q YAKR V VG ----- GQSS Y LPLKLN Y AGVIP I IFASS LLS FPATIA Q FF G ------- L QFIA AAL D PG S PLY 222
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 314 ITVFTA LIIFF CF FYTA LV FN SRET A D NLK RS G A FIPGIRPG RQ T SQ Y I D KILM R L TL V GA IYITLVCLV P EF L RMQW q N 393
Cdd:pfam00344 223 TVLYAL LIIFF AY FYTA IT FN PKDI A E NLK KQ G G FIPGIRPG KP T AK Y L D RVIP R I TL L GA LFLGIIAVL P DL L GALT - G 301
330 340
....*....|....*....|.
gi 648464965 394 I PF Y FGGTSLLI I V V V SM D FM 414
Cdd:pfam00344 302 V PF G FGGTSLLI V V G V AL D TY 322
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
19-426
1.27e-137
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 400.90
E-value: 1.27e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 19 MKRI LF LVTA LV V FR L GT H IP V PGI NPNVMKD L F at Q ADG I L G FF N M FSGGAL SRF S V FALGI M PYI SS SII M QL M T - A V 97
Cdd:TIGR00967 1 REKL LF TLGL LV L FR I GT F IP I PGI DASAFQN L I -- Q QNP I F G LL N T FSGGAL GQI S I FALGI S PYI TA SII I QL L T g D V 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 98 V P S L EAL KKEGE S GRRKI T Q Y TRY G T VL LA LF QS F GI ASF iq NFE G L V FT PGA M F VFTT V VS L V TG TVFL MWLGEQIT ER 177
Cdd:TIGR00967 79 P P L L QLQ KKEGE I GRRKI N Q L TRY L T LI LA FI QS L GI VMT -- GMY G Y V GD PGA F F YLLI V IQ L T TG SMIV MWLGEQIT KY 156
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 178 G L GNGIS I LIFAGI V A EM P ------ T A V SNMFDLVSNNQISTIAA L AIFAIVVVIT A F VVFV ER A Q R R I TVNY AKRQ V G N 251
Cdd:TIGR00967 157 G I GNGIS L LIFAGI A A TI P sgllqp T E V RQSKVRDLISFLQNLPF L LYLIATIIVF A V VVFV QQ A R R K I PIQS AKRQ G G R 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 252 K iy G G QS SH LPLKLN M AGVIP A IFAS SIILF PATI AS F FSQANEIR W LSDLSAA L QPGQ P LYITVFTA LIIFF C FFY TA L 331
Cdd:TIGR00967 237 R -- G S QS TY LPLKLN Y AGVIP V IFAS ALLSN PATI SQ F LNSNQGGA W FLNPILS L SLSD P IGAILYLI LIIFF S FFY VE L 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 332 VF N SRET A D NLK RS G A FIPGIRPG RQ T SQ Y IDKILM RLT L VG AIYIT L VC L V P E FL RMQWQ - NIPFYF GGTSLLI I V V V S 410
Cdd:TIGR00967 315 QL N PEDM A K NLK KQ G M FIPGIRPG KM T EK Y LKRVIP RLT F VG SLFLG L IA L L P N FL GAIGG l PTSKGL GGTSLLI V V G V A 394
410
....*....|....*.
gi 648464965 411 M D FMA Q VQTY L M S QQ Y 426
Cdd:TIGR00967 395 I D TYK Q LESE L I S RN Y 410
secY
CHL00161 preprotein translocase subunit SecY; Validated
17-429
1.78e-101
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 308.85
E-value: 1.78e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 17 D L MK R I LF LVTA L VVF RLGT H IPVPGI NPN vm KDLFATQADGI L GFF N M FSGG ALSRFSV FALGI M PYI SS SII M QL M T A 96
Cdd:CHL00161 9 E L LN R L LF TLGL L LLI RLGT F IPVPGI DHT -- QLYPSLSNNPL L NLL N T FSGG GFFVIGL FALGI L PYI NA SII I QL L T S 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 97 VV PSLE A L K KE - GE S GRRKI T QYTRY G T VLL A LF QS F GI ASFIQNF egl V F TPGAMFVFTT V VS L VT G TVFLM WL G E Q IT 175
Cdd:CHL00161 87 II PSLE K L Q KE e GE A GRRKI N QYTRY L T LGW A II QS I GI SFWLKPY --- L F NWNLLLALEI V LA L TS G SMIVL WL S E L IT 163
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 176 E R GLGNG I S I LIF AG IV AEM P TAVSNMF d LVSNNQ I STIAA L AIFAIVVVITAFVV F VER A Q R R I TVNY AK r Q V G NKIYG 255
Cdd:CHL00161 164 E K GLGNG S S L LIF FN IV SNL P KLLQSLL - FSLSAN I TILSI L LLLFLFFITLIGII F LQE A I R K I PLIS AK - Q L G KSSRL 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 256 GQS S H LPL K LN M AGV I P A IFAS SIILF P ATIA s FFSQANEIRW L SD L SAA L QPGQP LY ITVFTA LI I FF CF FY TAL V F N S 335
Cdd:CHL00161 242 ASN S Y LPL R LN Q AGV M P I IFAS ALLVL P GYLT - NILLNQFLLP L LS L FLQ L ASFKI LY LVLYFV LI L FF SY FY STI V L N P 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 336 RETAD NL KRSGAF IPGIRPG RQ T SQ Y ID K I L M RLTL V GA IYITLVC L V P EFLR -- MQWQNIPF y F G G TSLLI I V V V SM D F 413
Cdd:CHL00161 321 KDISE NL QKMAVS IPGIRPG KA T TK Y LK K T L N RLTL L GA LFLAFIA L L P NLIE sv LNLSVFKG - L G T TSLLI L V G V AI D T 399
410
....*....|....*.
gi 648464965 414 MA Q V QTYL M S QQ Y DSL 429
Cdd:CHL00161 400 SR Q I QTYL I S NN Y ENM 415
Name
Accession
Description
Interval
E-value
SecY
COG0201 Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular ...
13-431
0e+00
Preprotein translocase subunit SecY [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 439971
Cd Length: 427
Bit Score: 668.32
E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 13 A K YGD L M KRILF LVTA L V V F RLG T HIPVPGI N P NVMKD LFA T Q AD G I LG FF NMFSGGALSRFS V FALGIMPYI SS SIIMQ 92
Cdd:COG0201 9 F K IPE L R KRILF TLGI L I V Y RLG S HIPVPGI D P AALAQ LFA Q Q SG G L LG LL NMFSGGALSRFS I FALGIMPYI TA SIIMQ 88
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 93 L M T A V V P S LE A L K KEGE S GR R KITQYTRY G TV L LAL F Q S FGIA SFIQN --- FE GLV FT PG AM F VFT TV VS L VT GT V FLMW 169
Cdd:COG0201 89 L L T V V I P K LE E L Q KEGE E GR K KITQYTRY L TV V LAL L Q A FGIA LGLRS gpp GG GLV ID PG IL F YLL TV IT L TA GT M FLMW 168
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 170 LGEQITERG L GNGIS IL IFAGIVA EM P T A VSNM F D LV SNNQI S TIAA L AIFAIVVVIT AFVVFVE R AQRRI T V N YAKR Q V 249
Cdd:COG0201 169 LGEQITERG I GNGIS LI IFAGIVA RL P S A LAQI F E LV RTGEL S ILLL L LLLVLALAVI AFVVFVE Q AQRRI P V Q YAKR V V 248
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 250 G NKI YGGQS SH LPLK L NMAGVIP A IFASS II LFPATIA S FF SQANE ir WL SDLSAA L Q PG Q PLYI TVFTA LIIFF CF FYT 329
Cdd:COG0201 249 G RRM YGGQS TY LPLK V NMAGVIP I IFASS LL LFPATIA Q FF GGSSG -- WL QWIANY L S PG S PLYI VLYAL LIIFF TY FYT 326
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 330 A LV FN SR E T ADNLK R SG A FIPGIRPG RQ T SQ Y I DK I L M RLTLVGAI YIT L VCLV PE F L RMQW q NI PFYFGGTSLLI I V V V 409
Cdd:COG0201 327 A IT FN PE E I ADNLK K SG G FIPGIRPG KP T AE Y L DK V L T RLTLVGAI FLA L IAIL PE I L GAIT - GV PFYFGGTSLLI V V G V 405
410 420
....*....|....*....|..
gi 648464965 410 SM D F M A Q VQTY L MSQQ Y DSL LK 431
Cdd:COG0201 406 AL D T M K Q IESQ L LMRH Y EGF LK 427
SecY
pfam00344 SecY;
75-414
6.39e-147
SecY;
Pssm-ID: 459771
Cd Length: 322
Bit Score: 421.08
E-value: 6.39e-147
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 75 S V FALGIMPYI SS SIIMQL MT a VV P SLE A LKKEGE S GR R KI T QYTRY G TV L LAL F Q SF GI ASFI qnfeg L V FTP G AM F VF 154
Cdd:pfam00344 1 S L FALGIMPYI TA SIIMQL LG - VV I SLE E LKKEGE E GR K KI N QYTRY L TV V LAL I Q AI GI VLSL ----- G V YGG G GG F YL 74
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 155 TT V VS L VT GT V FLMWLGEQIT ER G L GNGIS IL IFAGIVA EM P T A V S NM - FD L VSNNQI S TIAA L AIFA I VVVIT A F VV FV 233
Cdd:pfam00344 75 LI V LQ L TA GT M FLMWLGEQIT KY G I GNGIS LI IFAGIVA RL P S A F S GA l IA L FRLGAR S ILPN L LLLI I TLAVI A L VV YL 154
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 234 ER A Q RRI T V N YAKR Q VG nkiyg GQSS H LPLKLN M AGVIP A IFASS IIL FPATIA S FF S qaneirw L SDLS AAL Q PG Q PLY 313
Cdd:pfam00344 155 QQ A E RRI P V Q YAKR V VG ----- GQSS Y LPLKLN Y AGVIP I IFASS LLS FPATIA Q FF G ------- L QFIA AAL D PG S PLY 222
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 314 ITVFTA LIIFF CF FYTA LV FN SRET A D NLK RS G A FIPGIRPG RQ T SQ Y I D KILM R L TL V GA IYITLVCLV P EF L RMQW q N 393
Cdd:pfam00344 223 TVLYAL LIIFF AY FYTA IT FN PKDI A E NLK KQ G G FIPGIRPG KP T AK Y L D RVIP R I TL L GA LFLGIIAVL P DL L GALT - G 301
330 340
....*....|....*....|.
gi 648464965 394 I PF Y FGGTSLLI I V V V SM D FM 414
Cdd:pfam00344 302 V PF G FGGTSLLI V V G V AL D TY 322
3a0501s007
TIGR00967 preprotein translocase, SecY subunit; Members of this protein family are the SecY component of ...
19-426
1.27e-137
preprotein translocase, SecY subunit; Members of this protein family are the SecY component of the SecYEG translocon, or protein translocation pore, which is driven by the ATPase SecA. This model does not discriminate bacterial from archaeal forms. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 273369
Cd Length: 410
Bit Score: 400.90
E-value: 1.27e-137
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 19 MKRI LF LVTA LV V FR L GT H IP V PGI NPNVMKD L F at Q ADG I L G FF N M FSGGAL SRF S V FALGI M PYI SS SII M QL M T - A V 97
Cdd:TIGR00967 1 REKL LF TLGL LV L FR I GT F IP I PGI DASAFQN L I -- Q QNP I F G LL N T FSGGAL GQI S I FALGI S PYI TA SII I QL L T g D V 78
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 98 V P S L EAL KKEGE S GRRKI T Q Y TRY G T VL LA LF QS F GI ASF iq NFE G L V FT PGA M F VFTT V VS L V TG TVFL MWLGEQIT ER 177
Cdd:TIGR00967 79 P P L L QLQ KKEGE I GRRKI N Q L TRY L T LI LA FI QS L GI VMT -- GMY G Y V GD PGA F F YLLI V IQ L T TG SMIV MWLGEQIT KY 156
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 178 G L GNGIS I LIFAGI V A EM P ------ T A V SNMFDLVSNNQISTIAA L AIFAIVVVIT A F VVFV ER A Q R R I TVNY AKRQ V G N 251
Cdd:TIGR00967 157 G I GNGIS L LIFAGI A A TI P sgllqp T E V RQSKVRDLISFLQNLPF L LYLIATIIVF A V VVFV QQ A R R K I PIQS AKRQ G G R 236
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 252 K iy G G QS SH LPLKLN M AGVIP A IFAS SIILF PATI AS F FSQANEIR W LSDLSAA L QPGQ P LYITVFTA LIIFF C FFY TA L 331
Cdd:TIGR00967 237 R -- G S QS TY LPLKLN Y AGVIP V IFAS ALLSN PATI SQ F LNSNQGGA W FLNPILS L SLSD P IGAILYLI LIIFF S FFY VE L 314
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 332 VF N SRET A D NLK RS G A FIPGIRPG RQ T SQ Y IDKILM RLT L VG AIYIT L VC L V P E FL RMQWQ - NIPFYF GGTSLLI I V V V S 410
Cdd:TIGR00967 315 QL N PEDM A K NLK KQ G M FIPGIRPG KM T EK Y LKRVIP RLT F VG SLFLG L IA L L P N FL GAIGG l PTSKGL GGTSLLI V V G V A 394
410
....*....|....*.
gi 648464965 411 M D FMA Q VQTY L M S QQ Y 426
Cdd:TIGR00967 395 I D TYK Q LESE L I S RN Y 410
secY
CHL00161 preprotein translocase subunit SecY; Validated
17-429
1.78e-101
preprotein translocase subunit SecY; Validated
Pssm-ID: 214379
Cd Length: 417
Bit Score: 308.85
E-value: 1.78e-101
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 17 D L MK R I LF LVTA L VVF RLGT H IPVPGI NPN vm KDLFATQADGI L GFF N M FSGG ALSRFSV FALGI M PYI SS SII M QL M T A 96
Cdd:CHL00161 9 E L LN R L LF TLGL L LLI RLGT F IPVPGI DHT -- QLYPSLSNNPL L NLL N T FSGG GFFVIGL FALGI L PYI NA SII I QL L T S 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 97 VV PSLE A L K KE - GE S GRRKI T QYTRY G T VLL A LF QS F GI ASFIQNF egl V F TPGAMFVFTT V VS L VT G TVFLM WL G E Q IT 175
Cdd:CHL00161 87 II PSLE K L Q KE e GE A GRRKI N QYTRY L T LGW A II QS I GI SFWLKPY --- L F NWNLLLALEI V LA L TS G SMIVL WL S E L IT 163
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 176 E R GLGNG I S I LIF AG IV AEM P TAVSNMF d LVSNNQ I STIAA L AIFAIVVVITAFVV F VER A Q R R I TVNY AK r Q V G NKIYG 255
Cdd:CHL00161 164 E K GLGNG S S L LIF FN IV SNL P KLLQSLL - FSLSAN I TILSI L LLLFLFFITLIGII F LQE A I R K I PLIS AK - Q L G KSSRL 241
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 256 GQS S H LPL K LN M AGV I P A IFAS SIILF P ATIA s FFSQANEIRW L SD L SAA L QPGQP LY ITVFTA LI I FF CF FY TAL V F N S 335
Cdd:CHL00161 242 ASN S Y LPL R LN Q AGV M P I IFAS ALLVL P GYLT - NILLNQFLLP L LS L FLQ L ASFKI LY LVLYFV LI L FF SY FY STI V L N P 320
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 336 RETAD NL KRSGAF IPGIRPG RQ T SQ Y ID K I L M RLTL V GA IYITLVC L V P EFLR -- MQWQNIPF y F G G TSLLI I V V V SM D F 413
Cdd:CHL00161 321 KDISE NL QKMAVS IPGIRPG KA T TK Y LK K T L N RLTL L GA LFLAFIA L L P NLIE sv LNLSVFKG - L G T TSLLI L V G V AI D T 399
410
....*....|....*.
gi 648464965 414 MA Q V QTYL M S QQ Y DSL 429
Cdd:CHL00161 400 SR Q I QTYL I S NN Y ENM 415
secY
PRK12417 preprotein translocase subunit SecY; Reviewed
18-432
1.26e-44
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 237095
Cd Length: 404
Bit Score: 160.16
E-value: 1.26e-44
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 18 LM K R ILF LVTA L VVFR LG TH I PV P GINP N V M KD lfat QADGI L GFFNMFS GG A L SRFSV F A LG IM P YIS S S II M QL MT a V 97
Cdd:PRK12417 12 IY K K ILF TCFI L FIYI LG SN I SI P FVSY N D M LG ---- GHESF L KIAAANT GG D L RTLNI F S LG LG P WMT S M II L QL FS - Y 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 98 VPSLEAL K KEG E SGRRK itqy T R YG T VLL A LF QS FGIASFIQNF E GL vftp GAMFVFTTVVS LVTGT V FL M WL GEQITER 177
Cdd:PRK12417 87 RKRDGLM K QTI E EQHYR ---- E R IL T LII A VI QS LAVILSLPSK E RI ---- SQTNILLNTLI LVTGT M FL V WL SDLNARY 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 178 G L G n G ISILIFAGIVAEM P TA V SNMF D LV snn Q I ST I aala IFAIV V V IT A F V - V F V E RAQR RI TV N YAKRQVGN K I Y gg 256
Cdd:PRK12417 159 G I G - G PMPIVLVSMIKSI P QD V IEYI D AS --- H I VI I ---- LLILL V I IT L F F l Y F I E LVEY RI PY N DIMNHNRF K M Y -- 228
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 257 qs S H L PL KLN M AG VI P AIFAS S IIL FP AT I ASFFSQ - ANEIRWL S DLSAA L QP G Q PL YI TV FTA L IIFFCF F YTALVF N S 335
Cdd:PRK12417 229 -- S Y L SI KLN P AG GM P IMYSM S LLV FP QY I IILILS i FPNNSGI S ADMDM L SF G S PL GV TV YLI L QFLLSY F FSFVNI N T 306
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 336 RET A DNLKR SG AF IPG IR PG RQ T SQ Y IDK I LM R LTLV GA IYI T LVCLV P EFLRMQWQNIPFY f GGT S LLIIVV V S M D F MA 415
Cdd:PRK12417 307 KQI A KDMLK SG NY IPG VY PG KD T ER Y LNY I AR R FSWF GA LFV T VIAGI P LYFTLFDPHLSTE - IYF S GQFMMF V G M S F NI 385
410
....*....|....*....
gi 648464965 416 -- QVQTY L MSQQ Y DS LL KK 432
Cdd:PRK12417 386 ad EIRAL L YFDK Y KP LL NQ 404
acc_sec_Y2
TIGR02920 accessory Sec system translocase SecY2; Members of this family are restricted to the ...
18-430
1.24e-38
accessory Sec system translocase SecY2; Members of this family are restricted to the Firmicutes lineage (low-GC Gram-positive bacteria) and appear to be paralogous to, and much more divergent than, the preprotein translocase SecY. Members include the SecY2 protein of the accessory Sec system in Streptococcus gordonii, involved in export of the highly glycosylated platelet-binding protein GspB. [Protein fate, Protein and peptide secretion and trafficking]
Pssm-ID: 131966
Cd Length: 395
Bit Score: 143.72
E-value: 1.24e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 18 LM K R ILF LVTA L VVFR LG TH IP V P GIN pn V M K DLFATQADGILGFFNMFS GG A L SRF S V F A LG IM P YIS S S II M QL MTAV 97
Cdd:TIGR02920 2 IY K K ILF TCFI L IIYV LG SY IP I P FVE -- V S K QDMEGVKNSFFKIAIANT GG N L TTL S I F S LG LG P WMT S M II L QL FSFT 79
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 98 vpsl EALKKEGE S gr R K IT QY - T R YG T VLL A LF Q SFG I ASFIQ N FE GL vftp GAMFVFTTVVS LVTGT VF L M WL GEQITE 176
Cdd:TIGR02920 80 ---- KSDGFDAQ S -- P K EQ QY r E R FL T LII A II Q GLA I IHSFT N KN GL ---- SDFNMLLATLI LVTGT CL L V WL ADLNAK 149
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 177 R G L G n G ISILIFAGIVAEM P tav SN M F D L VSNNQ I ST IA A L AI fa IVV V ITAFVV F V ERA QR RI T VN YAKRQVGNKIY gg 256
Cdd:TIGR02920 150 Y G I G - G SMPIVLVSMLKNI P --- SN V F E L FQMSY I WL IA L L IL -- LTL V ALFLLA F I ERA EY RI P VN DISLHNRSNLM -- 221
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 257 qs S H LP L KLN M AG VIPAIFAS S IILF P AT ---- IASF F SQANE I rwl SDLSAALQPGQ P LY I TVFTA L IIFFCF F Y T ALV 332
Cdd:TIGR02920 222 -- S Y LP I KLN P AG GMMYMYVM S LLML P QY iiil LGRI F PNSSL I --- NNWVFQFSFSS P VG I LIYLI L QMLLSY F F T FVN 296
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 333 F N SR E TADNLKR SG AF IPGI R PG RQ T SQ Y IDKILM R LTLV G AIYITLVCLV P EFLRMQWQNI - PFYFGGTSLLI I VVV S M 411
Cdd:TIGR02920 297 I N PK E ISKSFRK SG NY IPGI A PG KD T QR Y LNRLAR R FCWF G GVFNAFQLGI P LYFALFVPHL l TEAYIPGQFMM I TGM S F 376
410
....*....|....*....
gi 648464965 412 DFMAQVQ T Y L MSQQ Y DS LL 430
Cdd:TIGR02920 377 NIADEIR T I L YFDR Y KP LL 395
PRK08568
PRK08568 preprotein translocase subunit SecY; Reviewed
28-417
1.47e-10
preprotein translocase subunit SecY; Reviewed
Pssm-ID: 236293
Cd Length: 462
Bit Score: 62.93
E-value: 1.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 28 A L VVFRLG T H IP VP GI NP nvmkdlfat QADGILGFFNMFSG G al S RFSVFA LGI M P YISSS II M QL M ta V VPS L EA L KKE 107
Cdd:PRK08568 36 V L ILYFIL T N IP LY GI SQ --------- SSQDLFELLRIIFA G -- S FGTLLQ LGI G P IVTAG II L QL L -- V GSK L IN L DLS 102
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 108 GESG R RKITQYTRYGTVLLALFQS -- F GI A SFIQNFE GL VF TP GAMFVF tt VVS L VT G TVFLMW L G E QITER G L G N GIS I 185
Cdd:PRK08568 103 DPED R ALFQGLQKLLAIVMIALEA ap F VL A GAFGPAT GL AS TP LLALLI -- FLQ L FL G GILIIL L D E LVSKW G I G S GIS L 180
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 186 L I F AG I vae MP T AVSNM F DLVSNN Q ---------- I S T I AA ---------------- L AIFAIV V VI t AF VV FV E RAQRR 239
Cdd:PRK08568 181 F I L AG V --- SQ T IFVGL F NWLTGG Q glpvgfipal F S A I TS gnltlalllttrglll L GLITTI V IF - LI VV YL E SMRVE 256
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 240 I TVNYAK rqvgnki YG G QSSHL PLK LNMAG V I P A I FA --------------------------------- S SIILFPATI 286
Cdd:PRK08568 257 I PLSHGR ------- VR G ARGRY PLK FIYVS V L P V I LV ralqaniqlfgqllqrlgipilgtydssgaspi S GLAYYLSPP 329
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 287 A S FFS qaneir W LS D LSA A L qpgqp L Y ITVFTA L I I F F CF F YTALV - FNSRET A DN L KR SG AF IPG I rpg R QTSQY I D K I 365
Cdd:PRK08568 330 H S PYD ------ W IQ D PLR A I ----- I Y ALFMIV L S I L F AI F WVETT g LDPKTQ A RQ L QN SG MQ IPG F --- R RNPKV I E K V 395
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 648464965 366 L M R ---- L T LV G AIYIT L VCLVPEF L RM qwqnipf YF GGT S LL II V VVSMDFMAQV 417
Cdd:PRK08568 396 L E R yipp V T VI G GAIVG L LAVLADL L GA ------- LG GGT G LL LT V SIVYQLYEEI 444
PTZ00219
PTZ00219 Sec61 alpha subunit; Provisional
21-293
2.92e-03
Sec61 alpha subunit; Provisional
Pssm-ID: 185519 [Multi-domain]
Cd Length: 474
Bit Score: 39.99
E-value: 2.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 21 RI L FLVT AL V VF RLGTH IP VP GI NPNVMK D lfatqadgil G F FN M FSGG A LS R FSVFA LGI M P YIS SS II MQL M -- TAVV 98
Cdd:PTZ00219 33 KV L WTAI AL F VF LVCCQ IP LY GI RSSSSS D ---------- P F YW M RVIL A SN R GTLME LGI S P IVT SS MV MQL L ag SKII 102
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 99 PSLEAL K KEGE -- S G RR K itqytrygtv LL A L FQSF G -- I A SFIQNFE G LVFTP GA MFVFTTVVS L VTGTVFLMW L G E QI 174
Cdd:PTZ00219 103 DVDQNN K EDRA lf E G AQ K ---------- LL G L LITL G ea V A YVWSGMY G DISEI GA GNAILIILQ L FFAGIVVIL L D E LL 172
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648464965 175 TE - R GLG N GIS IL I FAG I V ------------------ A E MPT A VSNM F D L V --- S N --------------- N QISTI A AL 217
Cdd:PTZ00219 173 QK g Y GLG S GIS LF I ATN I C etiiwkafspttintgrg T E FEG A IIAL F H L L ftr S D klralkeafyrphlp N LTNLL A TV 252
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 648464965 218 AI F AI V VVITA F vvfvera QRRITVNYA K rqvgnki YG GQ SSHL P L KL NMAGV IP A I FASSII lfpa TIAS FFSQ A 293
Cdd:PTZ00219 253 LV F LV V IYFQG F ------- RVDLPLKSQ K ------- VR GQ QQSY P I KL FYTSN IP I I LQTALV ---- SNLY FFSQ I 310
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
