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Conserved domains on  [gi|648622498|ref|WP_026314249|]
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protein kinase [Actinomadura flavalba]

Protein Classification

protein kinase family protein( domain architecture ID 229378)

protein kinase family protein may catalyze the transfer of the gamma-phosphoryl group from ATP to substrates such as serine/threonine and/or tyrosine residues on proteins, or may be a pseudokinase

CATH:  1.10.510.10
PubMed:  16244704
SCOP:  4003661

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PKc_like super family cl21453
Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the ...
25-259 3.02e-16

Protein Kinases, catalytic domain; The protein kinase superfamily is mainly composed of the catalytic domains of serine/threonine-specific and tyrosine-specific protein kinases. It also includes RIO kinases, which are atypical serine protein kinases, aminoglycoside phosphotransferases, and choline kinases. These proteins catalyze the transfer of the gamma-phosphoryl group from ATP to hydroxyl groups in specific substrates such as serine, threonine, or tyrosine residues of proteins.


The actual alignment was detected with superfamily member cd14014:

Pssm-ID: 473864 [Multi-domain]  Cd Length: 260  Bit Score: 76.47  E-value: 3.02e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  25 TVLERLGAD-----YLARDADGG-LVVLSVL--PWVRGPRSRAVAQARLEAAAQASSRHLARVVHSDVGGDKPHVVGEYV 96
Cdd:cd14014    3 RLVRLLGRGgmgevYRARDTLLGrPVAIKVLrpELAEDEEFRERFLREARALARLSHPNIVRVYDVGEDDGRPYIVMEYV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  97 DGPSLRDVVGADGPLPAAELAATARRTAAALAALHRAGTTHGAFEPGRVLY-PRGGAKVT--G-AGTADPDAREVAH--- 169
Cdd:cd14014   83 EGGSLADLLRERGPLPPREALRILAQIADALAAAHRAGIVHRDIKPANILLtEDGRVKLTdfGiARALGDSGLTQTGsvl 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 170 --PAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPF-GFGAGDVLARRITSRPPDLG----DLDGPLRDLLLRCLDK 242
Cdd:cd14014  163 gtPAYMAPEQARGGPVDPRSDIYSLGVVLYELLTGRPPFdGDSPAAVLAKHLQEAPPPPSplnpDVPPALDAIILRALAK 242
                        250
                 ....*....|....*...
gi 648622498 243 DPEARPTTSR-LVRVLRD 259
Cdd:cd14014  243 DPEERPQSAAeLLAALRA 260
 
Name Accession Description Interval E-value
STKc_PknB_like cd14014
Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs ...
25-259 3.02e-16

Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270916 [Multi-domain]  Cd Length: 260  Bit Score: 76.47  E-value: 3.02e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  25 TVLERLGAD-----YLARDADGG-LVVLSVL--PWVRGPRSRAVAQARLEAAAQASSRHLARVVHSDVGGDKPHVVGEYV 96
Cdd:cd14014    3 RLVRLLGRGgmgevYRARDTLLGrPVAIKVLrpELAEDEEFRERFLREARALARLSHPNIVRVYDVGEDDGRPYIVMEYV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  97 DGPSLRDVVGADGPLPAAELAATARRTAAALAALHRAGTTHGAFEPGRVLY-PRGGAKVT--G-AGTADPDAREVAH--- 169
Cdd:cd14014   83 EGGSLADLLRERGPLPPREALRILAQIADALAAAHRAGIVHRDIKPANILLtEDGRVKLTdfGiARALGDSGLTQTGsvl 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 170 --PAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPF-GFGAGDVLARRITSRPPDLG----DLDGPLRDLLLRCLDK 242
Cdd:cd14014  163 gtPAYMAPEQARGGPVDPRSDIYSLGVVLYELLTGRPPFdGDSPAAVLAKHLQEAPPPPSplnpDVPPALDAIILRALAK 242
                        250
                 ....*....|....*...
gi 648622498 243 DPEARPTTSR-LVRVLRD 259
Cdd:cd14014  243 DPEERPQSAAeLLAALRA 260
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
18-229 3.11e-13

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 69.66  E-value: 3.11e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  18 PSRLGEHTVLERLGAD-----YLARDADGG-LVVLSVLPWVRGPRSRAVAQARLEA--AAQASSRHLARVVHSDVGGDKP 89
Cdd:COG0515    3 ALLLGRYRILRLLGRGgmgvvYLARDLRLGrPVALKVLRPELAADPEARERFRREAraLARLNHPNIVRVYDVGEEDGRP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  90 HVVGEYVDGPSLRDVVGADGPLPAAELAATARRTAAALAALHRAGTTHGAFEPGRVLYPRGG---------AKVTGAGTA 160
Cdd:COG0515   83 YLVMEYVEGESLADLLRRRGPLPPAEALRILAQLAEALAAAHAAGIVHRDIKPANILLTPDGrvklidfgiARALGGATL 162
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 161 DPDAREVAHPAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPF-GFGAGDVLARRITSRPPDLGDLD 229
Cdd:COG0515  163 TQTGTVVGTPGYMAPEQARGEPVDPRSDVYSLGVTLYELLTGRPPFdGDSPAELLRAHLREPPPPPSELR 232
Pkinase pfam00069
Protein kinase domain;
34-229 5.65e-07

Protein kinase domain;


Pssm-ID: 459660 [Multi-domain]  Cd Length: 217  Bit Score: 49.16  E-value: 5.65e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498   34 YLARDAD-GGLVVLSVLPwVRGPRSRAVAQARLEAAAQASSRH-----LARVVHSDvggDKPHVVGEYVDGPSLRDVVGA 107
Cdd:pfam00069  16 YKAKHRDtGKIVAIKKIK-KEKIKKKKDKNILREIKILKKLNHpnivrLYDAFEDK---DNLYLVLEYVEGGSLFDLLSE 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  108 DGPLPAAELAatarrtaaalaalhragttHGAFEPGRVLYPrGGAKVTGAGTadpdarevahPAYQAPEHIEDEPVGAPA 187
Cdd:pfam00069  92 KGAFSEREAK-------------------FIMKQILEGLES-GSSLTTFVGT----------PWYMAPEVLGGNPYGPKV 141
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 648622498  188 DVWAWAATLVYAATGHPPFGFGAGDVLARRITSRPPDLGDLD 229
Cdd:pfam00069 142 DVWSLGCILYELLTGKPPFPGINGNEIYELIIDQPYAFPELP 183
S_TKc smart00220
Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or ...
170-255 8.26e-04

Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-specific kinase subfamily.


Pssm-ID: 214567 [Multi-domain]  Cd Length: 254  Bit Score: 40.21  E-value: 8.26e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498   170 PAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPF-GFGAGDVLARRITSRPPDLgdldgPLRDLLLRCLDK------ 242
Cdd:smart00220 160 PEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFpGDDQLLELFKKIGKPKPPF-----PPPEWDISPEAKdlirkl 234
                           90
                   ....*....|....*.
gi 648622498   243 ---DPEARPTTSRLVR 255
Cdd:smart00220 235 lvkDPEKRLTAEEALQ 250
PknB_PASTA_kin NF033483
Stk1 family PASTA domain-containing Ser/Thr kinase;
61-115 9.06e-04

Stk1 family PASTA domain-containing Ser/Thr kinase;


Pssm-ID: 468045 [Multi-domain]  Cd Length: 563  Bit Score: 40.55  E-value: 9.06e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 648622498  61 AQARLEAAAQASsrhlARVVHS------DVG--GDKPHVVGEYVDGPSLRDVVGADGPLPAAE 115
Cdd:NF033483  50 FVARFRREAQSA----ASLSHPnivsvyDVGedGGIPYIVMEYVDGRTLKDYIREHGPLSPEE 108
 
Name Accession Description Interval E-value
STKc_PknB_like cd14014
Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs ...
25-259 3.02e-16

Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily includes many bacterial eukaryotic-type STKs including Staphylococcus aureus PknB (also called PrkC or Stk1), Bacillus subtilis PrkC, and Mycobacterium tuberculosis Pkn proteins (PknB, PknD, PknE, PknF, PknL, and PknH), among others. S. aureus PknB is the only eukaryotic-type STK present in this species, although many microorganisms encode for several such proteins. It is important for the survival and pathogenesis of S. aureus as it is involved in the regulation of purine and pyrimidine biosynthesis, cell wall metabolism, autolysis, virulence, and antibiotic resistance. M. tuberculosis PknB is essential for growth and it acts on diverse substrates including proteins involved in peptidoglycan synthesis, cell division, transcription, stress responses, and metabolic regulation. B. subtilis PrkC is located at the inner membrane of endospores and functions to trigger spore germination. Bacterial STKs in this subfamily show varied domain architectures. The well-characterized members such as S. aureus and M. tuberculosis PknB, and B. subtilis PrkC, contain an N-terminal cytosolic kinase domain, a transmembrane (TM) segment, and mutliple C-terminal extracellular PASTA domains. The PknB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270916 [Multi-domain]  Cd Length: 260  Bit Score: 76.47  E-value: 3.02e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  25 TVLERLGAD-----YLARDADGG-LVVLSVL--PWVRGPRSRAVAQARLEAAAQASSRHLARVVHSDVGGDKPHVVGEYV 96
Cdd:cd14014    3 RLVRLLGRGgmgevYRARDTLLGrPVAIKVLrpELAEDEEFRERFLREARALARLSHPNIVRVYDVGEDDGRPYIVMEYV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  97 DGPSLRDVVGADGPLPAAELAATARRTAAALAALHRAGTTHGAFEPGRVLY-PRGGAKVT--G-AGTADPDAREVAH--- 169
Cdd:cd14014   83 EGGSLADLLRERGPLPPREALRILAQIADALAAAHRAGIVHRDIKPANILLtEDGRVKLTdfGiARALGDSGLTQTGsvl 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 170 --PAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPF-GFGAGDVLARRITSRPPDLG----DLDGPLRDLLLRCLDK 242
Cdd:cd14014  163 gtPAYMAPEQARGGPVDPRSDIYSLGVVLYELLTGRPPFdGDSPAAVLAKHLQEAPPPPSplnpDVPPALDAIILRALAK 242
                        250
                 ....*....|....*...
gi 648622498 243 DPEARPTTSR-LVRVLRD 259
Cdd:cd14014  243 DPEERPQSAAeLLAALRA 260
SPS1 COG0515
Serine/threonine protein kinase [Signal transduction mechanisms];
18-229 3.11e-13

Serine/threonine protein kinase [Signal transduction mechanisms];


Pssm-ID: 440281 [Multi-domain]  Cd Length: 482  Bit Score: 69.66  E-value: 3.11e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  18 PSRLGEHTVLERLGAD-----YLARDADGG-LVVLSVLPWVRGPRSRAVAQARLEA--AAQASSRHLARVVHSDVGGDKP 89
Cdd:COG0515    3 ALLLGRYRILRLLGRGgmgvvYLARDLRLGrPVALKVLRPELAADPEARERFRREAraLARLNHPNIVRVYDVGEEDGRP 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  90 HVVGEYVDGPSLRDVVGADGPLPAAELAATARRTAAALAALHRAGTTHGAFEPGRVLYPRGG---------AKVTGAGTA 160
Cdd:COG0515   83 YLVMEYVEGESLADLLRRRGPLPPAEALRILAQLAEALAAAHAAGIVHRDIKPANILLTPDGrvklidfgiARALGGATL 162
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 161 DPDAREVAHPAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPF-GFGAGDVLARRITSRPPDLGDLD 229
Cdd:COG0515  163 TQTGTVVGTPGYMAPEQARGEPVDPRSDVYSLGVTLYELLTGRPPFdGDSPAELLRAHLREPPPPPSELR 232
Pkinase pfam00069
Protein kinase domain;
34-229 5.65e-07

Protein kinase domain;


Pssm-ID: 459660 [Multi-domain]  Cd Length: 217  Bit Score: 49.16  E-value: 5.65e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498   34 YLARDAD-GGLVVLSVLPwVRGPRSRAVAQARLEAAAQASSRH-----LARVVHSDvggDKPHVVGEYVDGPSLRDVVGA 107
Cdd:pfam00069  16 YKAKHRDtGKIVAIKKIK-KEKIKKKKDKNILREIKILKKLNHpnivrLYDAFEDK---DNLYLVLEYVEGGSLFDLLSE 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  108 DGPLPAAELAatarrtaaalaalhragttHGAFEPGRVLYPrGGAKVTGAGTadpdarevahPAYQAPEHIEDEPVGAPA 187
Cdd:pfam00069  92 KGAFSEREAK-------------------FIMKQILEGLES-GSSLTTFVGT----------PWYMAPEVLGGNPYGPKV 141
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 648622498  188 DVWAWAATLVYAATGHPPFGFGAGDVLARRITSRPPDLGDLD 229
Cdd:pfam00069 142 DVWSLGCILYELLTGKPPFPGINGNEIYELIIDQPYAFPELP 183
STKc_STK25 cd06642
Catalytic domain of Serine/Threonine Kinase 25 (also called Yeast Sps1/Ste20-related kinase 1); ...
62-255 1.67e-05

Catalytic domain of Serine/Threonine Kinase 25 (also called Yeast Sps1/Ste20-related kinase 1); STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). It is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may be involved in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270810 [Multi-domain]  Cd Length: 277  Bit Score: 45.43  E-value: 1.67e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  62 QARLEAAAQASSRHLARVVHSDVGGDKPHVVGEYVDGPSLRDVVgADGPLPAAELAATARRTAAALAALHRAGTTHGAFE 141
Cdd:cd06642   50 QQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERKIHRDIK 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 142 PGRVLYP-RGGAKVTGAGTA----DPDARE---VAHPAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPFGfgagDV 213
Cdd:cd06642  129 AANVLLSeQGDVKLADFGVAgqltDTQIKRntfVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNS----DL 204
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 648622498 214 LARRI-----TSRPPDL-GDLDGPLRDLLLRCLDKDPEARPTTSRLVR 255
Cdd:cd06642  205 HPMRVlflipKNSPPTLeGQHSKPFKEFVEACLNKDPRFRPTAKELLK 252
PKc_STE cd05122
Catalytic domain of STE family Protein Kinases; PKs catalyze the transfer of the ...
170-206 4.52e-05

Catalytic domain of STE family Protein Kinases; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPKK kinases (MAPKKKs), or MAPKKK kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. The STE family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270692 [Multi-domain]  Cd Length: 254  Bit Score: 44.12  E-value: 4.52e-05
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 648622498 170 PAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPF 206
Cdd:cd05122  161 PYWMAPEVIQGKPYGFKADIWSLGITAIEMAEGKPPY 197
STKc_MST4 cd06640
Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4; STKs ...
62-255 6.44e-05

Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 132971 [Multi-domain]  Cd Length: 277  Bit Score: 43.50  E-value: 6.44e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  62 QARLEAAAQASSRHLARVVHSDVGGDKPHVVGEYVDGPSLRDVVGAdGPLPAAELAATARRTAAALAALHRAGTTHGAFE 141
Cdd:cd06640   50 QQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 142 PGRVLYPRGGA------KVTGAGTADPDARE--VAHPAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPfgfgAGDV 213
Cdd:cd06640  129 AANVLLSEQGDvkladfGVAGQLTDTQIKRNtfVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP----NSDM 204
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 648622498 214 LARRI-----TSRPPDL-GDLDGPLRDLLLRCLDKDPEARPTTSRLVR 255
Cdd:cd06640  205 HPMRVlflipKNNPPTLvGDFSKPFKEFIDACLNKDPSFRPTAKELLK 252
STKc_ASK cd06624
Catalytic domain of the Serine/Threonine Kinase, Apoptosis signal-regulating kinase; STKs ...
172-206 8.29e-05

Catalytic domain of the Serine/Threonine Kinase, Apoptosis signal-regulating kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs) and include ASK1, ASK2, and MAPKKK15. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270794 [Multi-domain]  Cd Length: 268  Bit Score: 43.17  E-value: 8.29e-05
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 648622498 172 YQAPEHIEDEP--VGAPADVWAWAATLVYAATGHPPF 206
Cdd:cd06624  175 YMAPEVIDKGQrgYGPPADIWSLGCTIIEMATGKPPF 211
STKc_Rim15_like cd05611
Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases; STKs catalyze the ...
31-221 1.37e-04

Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. The Rim15-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270762 [Multi-domain]  Cd Length: 263  Bit Score: 42.47  E-value: 1.37e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  31 GADYLARD-ADGGLVVLSVLPWVRGPRSRAVAQARLEAA---AQASSRHLARVVHSDVGGDKPHVVGEYVDGPSLRDVVG 106
Cdd:cd05611   10 GSVYLAKKrSTGDYFAIKVLKKSDMIAKNQVTNVKAERAimmIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIK 89
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 107 ADGPLPAAELAATARRTAAALAALHRAGTTHGAFEPGRVLY-PRGGAKVTGAGTAD------PDAREVAHPAYQAPEHIE 179
Cdd:cd05611   90 TLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIdQTGHLKLTDFGLSRnglekrHNKKFVGTPDYLAPETIL 169
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|..
gi 648622498 180 DEPVGAPADVWAWAATLVYAATGHPPFGFGAGDVLARRITSR 221
Cdd:cd05611  170 GVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSR 211
STKc_MAPKKK cd06606
Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase ...
170-206 1.90e-04

Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270783 [Multi-domain]  Cd Length: 258  Bit Score: 42.12  E-value: 1.90e-04
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 648622498 170 PAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPF 206
Cdd:cd06606  165 PYWMAPEVIRGEGYGRAADIWSLGCTVIEMATGKPPW 201
STKc_CASK cd14094
Catalytic domain of the Serine/Threonine Kinase, Calcium/calmodulin-dependent serine protein ...
153-218 2.52e-04

Catalytic domain of the Serine/Threonine Kinase, Calcium/calmodulin-dependent serine protein kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CASK belongs to the MAGUK (membrane-associated guanylate kinase) protein family, which functions as multiple domain adaptor proteins and is characterized by the presence of a core of three domains: PDZ, SH3, and guanylate kinase (GuK). The enzymatically inactive GuK domain in MAGUK proteins mediates protein-protein interactions and associates intramolecularly with the SH3 domain. In addition, CASK contains a catalytic kinase and two L27 domains. It is highly expressed in the nervous system and plays roles in synaptic protein targeting, neural development, and regulation of gene expression. Binding partners include parkin (a Parkinson's disease molecule), neurexin (adhesion molecule), syndecans, calcium channel proteins, CINAP (nucleosome assembly protein), transcription factor Tbr-1, and the cytoplasmic adaptor proteins Mint1, Veli/mLIN-7/MALS, SAP97, caskin, and CIP98. Deletion or mutations in the CASK gene have been implicated in X-linked mental retardation. The CASK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270996 [Multi-domain]  Cd Length: 300  Bit Score: 41.76  E-value: 2.52e-04
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 648622498 153 KVTGAGTAD--PDAREVAH-----PAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPFgFGAGDVLARRI 218
Cdd:cd14094  152 KLGGFGVAIqlGESGLVAGgrvgtPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF-YGTKERLFEGI 223
STKc_FA2-like cd08529
Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii FA2 and similar ...
167-255 2.84e-04

Catalytic domain of the Serine/Threonine Kinases, Chlamydomonas reinhardtii FA2 and similar proteins; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family, which includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily contains FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270868 [Multi-domain]  Cd Length: 256  Bit Score: 41.63  E-value: 2.84e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 167 VAHPAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPFGFGAGDVLARRI---------TSRPPDLGDLdgplrdlLL 237
Cdd:cd08529  162 VGTPYYLSPELCEDKPYNEKSDVWALGCVLYELCTGKHPFEAQNQGALILKIvrgkyppisASYSQDLSQL-------ID 234
                         90
                 ....*....|....*...
gi 648622498 238 RCLDKDPEARPTTSRLVR 255
Cdd:cd08529  235 SCLTKDYRQRPDTTELLR 252
STKc_OSR1_SPAK cd06610
Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and ...
167-255 2.84e-04

Catalytic domain of the Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270787 [Multi-domain]  Cd Length: 267  Bit Score: 41.57  E-value: 2.84e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 167 VAHPAYQAPEHIE-DEPVGAPADVWAWAATLVYAATGHPPFG-FGAGDVLARRITSRPPDL-GDLDGPLRDLL-----LR 238
Cdd:cd06610  167 VGTPCWMAPEVMEqVRGYDFKADIWSFGITAIELATGAAPYSkYPPMKVLMLTLQNDPPSLeTGADYKKYSKSfrkmiSL 246
                         90
                 ....*....|....*..
gi 648622498 239 CLDKDPEARPTTSRLVR 255
Cdd:cd06610  247 CLQKDPSKRPTAEELLK 263
STKc_obscurin_rpt1 cd14107
Catalytic kinase domain, first repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs ...
160-251 3.68e-04

Catalytic kinase domain, first repeat, of the Giant Serine/Threonine Kinase Obscurin; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Obscurin, approximately 800 kDa in size, is one of three giant proteins expressed in vetebrate striated muscle, together with titin and nebulin. It is a multidomain protein composed of tandem adhesion and signaling domains, including 49 immunoglobulin (Ig) and 2 fibronectin type III (FN3) domains at the N-terminus followed by a more complex region containing more Ig domains, a conserved SH3 domain near a RhoGEF and PH domains, non-modular regions, as well as IQ and phosphorylation motifs. The obscurin gene also encode two kinase domains, which are not expressed as part of the 800 kDa protein, but as a smaller, alternatively spliced product present mainly in the heart muscle, also called obscurin-MLCK. Obscurin is localized at the peripheries of Z-disks and M-lines, where it is able to communicate with the surrounding myoplasm. It interacts with diverse proteins including sAnk1, myosin, titin, and MyBP-C. It may act as a scaffold for the assembly of elements of the contractile apparatus. The obscurin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271009 [Multi-domain]  Cd Length: 257  Bit Score: 41.41  E-value: 3.68e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 160 ADPDAREVAHPAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPFgFGAGD------VLARRITSRPPDLGDLDGPLR 233
Cdd:cd14107  153 SEHQFSKYGSPEFVAPEIVHQEPVSAATDIWALGVIAYLSLTCHSPF-AGENDratllnVAEGVVSWDTPEITHLSEDAK 231
                         90
                 ....*....|....*...
gi 648622498 234 DLLLRCLDKDPEARPTTS 251
Cdd:cd14107  232 DFIKRVLQPDPEKRPSAS 249
S_TKc smart00220
Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or ...
170-255 8.26e-04

Serine/Threonine protein kinases, catalytic domain; Phosphotransferases. Serine or threonine-specific kinase subfamily.


Pssm-ID: 214567 [Multi-domain]  Cd Length: 254  Bit Score: 40.21  E-value: 8.26e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498   170 PAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPF-GFGAGDVLARRITSRPPDLgdldgPLRDLLLRCLDK------ 242
Cdd:smart00220 160 PEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFpGDDQLLELFKKIGKPKPPF-----PPPEWDISPEAKdlirkl 234
                           90
                   ....*....|....*.
gi 648622498   243 ---DPEARPTTSRLVR 255
Cdd:smart00220 235 lvkDPEKRLTAEEALQ 250
PknB_PASTA_kin NF033483
Stk1 family PASTA domain-containing Ser/Thr kinase;
61-115 9.06e-04

Stk1 family PASTA domain-containing Ser/Thr kinase;


Pssm-ID: 468045 [Multi-domain]  Cd Length: 563  Bit Score: 40.55  E-value: 9.06e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 648622498  61 AQARLEAAAQASsrhlARVVHS------DVG--GDKPHVVGEYVDGPSLRDVVGADGPLPAAE 115
Cdd:NF033483  50 FVARFRREAQSA----ASLSHPnivsvyDVGedGGIPYIVMEYVDGRTLKDYIREHGPLSPEE 108
STKc_MEKK1_plant cd06632
Catalytic domain of the Serine/Threonine Kinase, Plant Mitogen-Activated Protein (MAP) ...
170-255 1.19e-03

Catalytic domain of the Serine/Threonine Kinase, Plant Mitogen-Activated Protein (MAP)/Extracellular signal-Regulated Kinase (ERK) Kinase Kinase 1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This subfamily is composed of plant MAPK kinase kinases (MAPKKKs) including Arabidopsis thaliana MEKK1 and MAPKKK3. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270802 [Multi-domain]  Cd Length: 259  Bit Score: 39.69  E-value: 1.19e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 170 PAYQAPEHI--EDEPVGAPADVWAWAATLVYAATGHPPFGFGAGDVLARRITSRP-----PDlgDLDGPLRDLLLRCLDK 242
Cdd:cd06632  165 PYWMAPEVImqKNSGYGLAVDIWSLGCTVLEMATGKPPWSQYEGVAAIFKIGNSGelppiPD--HLSPDAKDFIRLCLQR 242
                         90
                 ....*....|...
gi 648622498 243 DPEARPTTSRLVR 255
Cdd:cd06632  243 DPEDRPTASQLLE 255
PKc_MKK7 cd06618
Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase ...
170-225 1.52e-03

Catalytic domain of the dual-specificity Protein Kinase, Mitogen-activated protein Kinase Kinase 7; PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine (ST) or tyrosine residues on protein substrates. MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270791 [Multi-domain]  Cd Length: 295  Bit Score: 39.66  E-value: 1.52e-03
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 648622498 170 PAYQAPEHIEDEPVGA---PADVWAWAATLVYAATGHPPFGFGAGD--VLARRITSRPPDL 225
Cdd:cd06618  178 AAYMAPERIDPPDNPKydiRADVWSLGISLVELATGQFPYRNCKTEfeVLTKILNEEPPSL 238
STKc_CaMKII cd14086
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
170-206 1.54e-03

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. There are several types of CaMKs including CaMKI, CaMKII, and CaMKIV. CaMKs contain an N-terminal catalytic domain followed by a regulatory domain that harbors a CaM binding site. In addition, CaMKII contains a C-terminal association domain that facilitates oligomerization. There are four CaMKII proteins (alpha, beta, gamma, delta) encoded by different genes; each gene undergoes alternative splicing to produce more than 30 isoforms. CaMKII-alpha and -beta are enriched in neurons while CaMKII-gamma and -delta are predominant in myocardium. CaMKII is a signaling molecule that translates upstream calcium and reactive oxygen species (ROS) signals into downstream responses that play important roles in synaptic function and cardiovascular physiology. It is a major component of the postsynaptic density and is critical in regulating synaptic plasticity including long-term potentiation. It is critical in regulating ion channels and proteins involved in myocardial excitation-contraction and excitation-transcription coupling. Excessive CaMKII activity promotes processes that contribute to heart failure and arrhythmias. The CaMKII subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270988 [Multi-domain]  Cd Length: 292  Bit Score: 39.33  E-value: 1.54e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 648622498 170 PAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPF 206
Cdd:cd14086  167 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 203
STKc_Rad53_Cds1 cd14098
Catalytic domain of the yeast Serine/Threonine Kinases, Rad53 and Cds1; STKs catalyze the ...
91-255 1.77e-03

Catalytic domain of the yeast Serine/Threonine Kinases, Rad53 and Cds1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Rad53 and Cds1 are the checkpoint kinase 2 (Chk2) homologs found in budding and fission yeast, respectively. They play a central role in the cell's response to DNA lesions to prevent genome rearrangements and maintain genome integrity. They are phosphorylated in response to DNA damage and incomplete replication, and are essential for checkpoint control. They help promote DNA repair by stalling the cell cycle prior to mitosis in the presence of DNA damage. The Rad53/Cds1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271000 [Multi-domain]  Cd Length: 265  Bit Score: 39.00  E-value: 1.77e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  91 VVGEYVDGPSLRDVVGADGPLPAAELAATARRTAAALAALHRAGTTHGAFEPGRVLY----PR-------GGAKVTGAGT 159
Cdd:cd14098   78 LVMEYVEGGDLMDFIMAWGAIPEQHARELTKQILEAMAYTHSMGITHRDLKPENILItqddPVivkisdfGLAKVIHTGT 157
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 160 ADPDAreVAHPAYQAPEHIEDEPVGAP------ADVWAWAATLVYAATGHPPFGFGAGDVLARRITS----RPPDLG-DL 228
Cdd:cd14098  158 FLVTF--CGTMAYLAPEILMSKEQNLQggysnlVDMWSVGCLVYVMLTGALPFDGSSQLPVEKRIRKgrytQPPLVDfNI 235
                        170       180
                 ....*....|....*....|....*..
gi 648622498 229 DGPLRDLLLRCLDKDPEARPTTSRLVR 255
Cdd:cd14098  236 SEEAIDFILRLLDVDPEKRMTAAQALD 262
STKc_CaMKI_beta cd14169
Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase ...
150-206 2.01e-03

Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type I beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. CaMKs are multifunctional calcium and calmodulin (CaM) stimulated STKs involved in cell cycle regulation. The CaMK family includes CaMKI, CaMKII, CaMKIV, and CaMK kinase (CaMKK). In vertebrates, there are four CaMKI proteins encoded by different genes (alpha, beta, gamma, and delta), each producing at least one variant. CaMKs contain an N-terminal catalytic domain and a C-terminal regulatory domain that harbors a CaM binding site. CaMKI proteins are monomeric and they play pivotal roles in the nervous system, including long-term potentiation, dendritic arborization, neurite outgrowth, and the formation of spines, synapses, and axons. In addition, they may be involved in osteoclast differentiation and bone resorption. The CaMKI-beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 271071 [Multi-domain]  Cd Length: 277  Bit Score: 39.10  E-value: 2.01e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 648622498 150 GGAKVTGAGTadpdarevahPAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPF 206
Cdd:cd14169  156 QGMLSTACGT----------PGYVAPELLEQKPYGKAVDVWAIGVISYILLCGYPPF 202
STKc_ULK4 cd14010
Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 4; STKs catalyze the ...
169-223 4.43e-03

Catalytic domain of the Serine/Threonine kinase, Unc-51-like kinase 4; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. ULK4 is a functionally uncharacterized kinase that shows similarity to ATG1/ULKs. The ATG1/ULK complex is conserved from yeast to humans and it plays a critical role in the initiation of autophagy, the intracellular system that leads to the lysosomal degradation of cellular components and their recycling into basic metabolic units. The ULK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270912 [Multi-domain]  Cd Length: 269  Bit Score: 38.04  E-value: 4.43e-03
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 648622498 169 HPAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPFGFGAGDVLARRITSRPP 223
Cdd:cd14010  173 TPYYMAPELFQGGVHSFASDLWALGCVLYEMFTGKPPFVAESFTELVEKILNEDP 227
STKc_Cdc7_like cd06627
Catalytic domain of Cell division control protein 7-like Serine/Threonine Kinases; STKs ...
167-206 6.23e-03

Catalytic domain of Cell division control protein 7-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases, which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270797 [Multi-domain]  Cd Length: 254  Bit Score: 37.59  E-value: 6.23e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|
gi 648622498 167 VAHPAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPF 206
Cdd:cd06627  160 VGTPYWMAPEVIEMSGVTTASDIWSVGCTVIELLTGNPPY 199
STKc_MLCK-like cd14006
Catalytic kinase domain of Myosin Light Chain Kinase-like Serine/Threonine Kinases; STKs ...
170-251 6.88e-03

Catalytic kinase domain of Myosin Light Chain Kinase-like Serine/Threonine Kinases; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This family is composed of MLCKs and related MLCK-like kinase domains from giant STKs such as titin, obscurin, SPEG, Unc-89, Trio, kalirin, and Twitchin. Also included in this family are Death-Associated Protein Kinases (DAPKs) and Death-associated protein kinase-Related Apoptosis-inducing protein Kinase (DRAKs). MLCK phosphorylates myosin regulatory light chain and controls the contraction of all muscle types. Titin, obscurin, Twitchin, and SPEG are muscle proteins involved in the contractile apparatus. The giant STKs are multidomain proteins containing immunoglobulin (Ig), fibronectin type III (FN3), SH3, RhoGEF, PH and kinase domains. Titin, obscurin, Twitchin, and SPEG contain many Ig domain repeats at the N-terminus, while Trio and Kalirin contain spectrin-like repeats. The MLCK-like family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270908 [Multi-domain]  Cd Length: 247  Bit Score: 37.25  E-value: 6.88e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 170 PAYQAPEHIEDEPVGAPADVWAwAATLVYAA-TGHPPFgFGAGD------VLARRITSRPPDLGDLDGPLRDLLLRCLDK 242
Cdd:cd14006  154 PEFVAPEIVNGEPVSLATDMWS-IGVLTYVLlSGLSPF-LGEDDqetlanISACRVDFSEEYFSSVSQEAKDFIRKLLVK 231

                 ....*....
gi 648622498 243 DPEARPTTS 251
Cdd:cd14006  232 EPRKRPTAQ 240
STKc_TAK1 cd14058
Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Activated ...
56-257 9.31e-03

Catalytic domain of the Serine/Threonine Kinase, Transforming Growth Factor beta Activated Kinase-1; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. TAK1 is also known as mitogen-activated protein kinase kinase kinase 7 (MAPKKK7 or MAP3K7), TAK, or MEKK7. As a MAPKKK, it is an important mediator of cellular responses to extracellular signals. It regulates both the c-Jun N-terminal kinase and p38 MAPK cascades by activating the MAPK kinases, MKK4 and MKK3/6. In addition, TAK1 plays diverse roles in immunity and development, in different biological contexts, through many signaling pathways including TGFbeta/BMP, Wnt/Fz, and NF-kB. It is also implicated in the activation of the tumor suppressor kinase, LKB1. The TAK1 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270960 [Multi-domain]  Cd Length: 253  Bit Score: 37.03  E-value: 9.31e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  56 RSRAVAQARLEA-----AAQASSRHLARVVHSDV--------GGDKPHVVGEYVDGPSLRDVVGADGPLP------AAEL 116
Cdd:cd14058   15 RNQIVAVKIIESesekkAFEVEVRQLSRVDHPNIiklygacsNQKPVCLVMEYAEGGSLYNVLHGKEPKPiytaahAMSW 94
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 117 AATARRTAAALAALHRAGTTHGAFEPGRVLYPRGGA--KVTGAGTA------DPDAREVAhpAYQAPEHIEDEPVGAPAD 188
Cdd:cd14058   95 ALQCAKGVAYLHSMKPKALIHRDLKPPNLLLTNGGTvlKICDFGTAcdisthMTNNKGSA--AWMAPEVFEGSKYSEKCD 172
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 648622498 189 VWAWAATLVYAATGHPPFGFGAGDvlARRIT------SRPPDLGDLDGPLRDLLLRCLDKDPEARPTTSRLVRVL 257
Cdd:cd14058  173 VFSWGIILWEVITRRKPFDHIGGP--AFRIMwavhngERPPLIKNCPKPIESLMTRCWSKDPEKRPSMKEIVKIM 245
STKc_MST3 cd06641
Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3; STKs ...
62-278 9.56e-03

Catalytic domain of the Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270809 [Multi-domain]  Cd Length: 277  Bit Score: 36.97  E-value: 9.56e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498  62 QARLEAAAQASSRHLARVVHSDVGGDKPHVVGEYVDGPSLRDVVgADGPLPAAELAATARRTAAALAALHRAGTTHGAFE 141
Cdd:cd06641   50 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 128
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 648622498 142 PGRVLYPRGG-AKVTGAGTA----DPDARE---VAHPAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPFG-FGAGD 212
Cdd:cd06641  129 AANVLLSEHGeVKLADFGVAgqltDTQIKRn*fVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSeLHPMK 208
                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 648622498 213 VLARRITSRPPDL-GDLDGPLRDLLLRCLDKDPEARPTTSRLVR---VLRDEAPHEERTgpRRIPRY-RWR 278
Cdd:cd06641  209 VLFLIPKNNPPTLeGNYSKPLKEFVEACLNKEPSFRPTAKELLKhkfILRNAKKTSYLT--ELIDRYkRWK 277
STKc_cPKC_beta cd05616
Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C beta; STKs ...
170-206 9.73e-03

Catalytic domain of the Serine/Threonine Kinase, Classical Protein Kinase C beta; STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG (1,2-diacylglycerol) in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG, and in most cases, phosphatidylserine (PS) for activation. The cPKC-beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.


Pssm-ID: 270767 [Multi-domain]  Cd Length: 323  Bit Score: 37.29  E-value: 9.73e-03
                         10        20        30
                 ....*....|....*....|....*....|....*..
gi 648622498 170 PAYQAPEHIEDEPVGAPADVWAWAATLVYAATGHPPF 206
Cdd:cd05616  165 PDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF 201
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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