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Conserved domains on  [gi|653309642|ref|WP_027485857|]
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MULTISPECIES: chemotaxis protein CheB [Rhodanobacter]

Protein Classification

chemotaxis protein CheB( domain architecture ID 11451324)

chemotaxis protein CheB is a protein-glutamate methylesterase which demethylates gamma-glutamyl methyl ester residues in chemoreceptor proteins

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
CheB COG2201
Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains ...
 345-526 2.09e-29

Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains [Signal transduction mechanisms];


:

Pssm-ID: 441803  Cd Length: 193  Bit Score: 114.41  E-value: 2.09e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 345 KVVLLGAATDGIDAVCTFLAALPASTRQTFLLTQHLGRQSDASLVAEFSANCALPVRLAKAG-RAKPGEVLLVPAGQQVR 423
Cdd:COG2201    4 KVVAIGASTGGPEALEEVLSALPADFPAPIVIVQHMPPGFTSSLAERLNRLTALPVKEAEDGeRLEPGHVYIAPGGRHLE 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 424 LRRDGN--IELQANDADAPPEPSIDASLTMAANAFGRDALAIVFAGRGNDAVAGAQAVHDRGGQVWVES-SSGEHFaDMV 500
Cdd:COG2201   84 VERSGGyrLRLSDGPPVNGHRPSVDVLFRSLAEVYGERAVGVILTGMGSDGAEGLKAIKEAGGLTIAQDeESCVVY-GMP 162

                        170       180
                 ....*....|....*....|....*.
gi 653309642 501 SGIFAERLVSFSGTPSELAAHLIEVF 526
Cdd:COG2201  163 RAAIEAGAVDEVLPLEEIAAALLRLL 188
 
Name Accession Description Interval E-value
CheB COG2201
Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains ...
 345-526 2.09e-29

Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains [Signal transduction mechanisms];


Pssm-ID: 441803  Cd Length: 193  Bit Score: 114.41  E-value: 2.09e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 345 KVVLLGAATDGIDAVCTFLAALPASTRQTFLLTQHLGRQSDASLVAEFSANCALPVRLAKAG-RAKPGEVLLVPAGQQVR 423
Cdd:COG2201    4 KVVAIGASTGGPEALEEVLSALPADFPAPIVIVQHMPPGFTSSLAERLNRLTALPVKEAEDGeRLEPGHVYIAPGGRHLE 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 424 LRRDGN--IELQANDADAPPEPSIDASLTMAANAFGRDALAIVFAGRGNDAVAGAQAVHDRGGQVWVES-SSGEHFaDMV 500
Cdd:COG2201   84 VERSGGyrLRLSDGPPVNGHRPSVDVLFRSLAEVYGERAVGVILTGMGSDGAEGLKAIKEAGGLTIAQDeESCVVY-GMP 162

                        170       180
                 ....*....|....*....|....*.
gi 653309642 501 SGIFAERLVSFSGTPSELAAHLIEVF 526
Cdd:COG2201  163 RAAIEAGAVDEVLPLEEIAAALLRLL 188
CheB_methylest pfam01339
CheB methylesterase;
347-522 2.03e-25

CheB methylesterase;


Pssm-ID: 460166  Cd Length: 178  Bit Score: 102.89  E-value: 2.03e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642  347 VLLGAATDGIDAVCTFLAALPASTRQTFLLTQHLGRQSDASLVAEFSANCALPVRLAKAG-RAKPGEVLLVPAGQQVRLR 425
Cdd:pfam01339   1 VAIGASTGGPEALEELLPALPADLPAAIVVVQHMPPGFTSSLAERLNRLSALPVKEAEDGePLEPGTVYIAPGGYHLLVE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642  426 RDGNIELQANDADAPPEPSIDASLTMAANAF-GRDALAIVFAGRGNDAVAGAQAVHDRGGQVWVESSSGEHFADMVSGIF 504
Cdd:pfam01339  81 DGRGPYRSDGPPVNGHRPSIDVLFRSLAEAYgGKRAIGVILTGMGSDGAAGLKAIKEAGGLTIAQDPATAVVYGMPRAAI 160

                         170
                  ....*....|....*...
gi 653309642  505 AERLVSFSGTPSELAAHL 522
Cdd:pfam01339 161 EAGAADFVLPLEEIAAEL 178
CheB_Rec cd16432
Chemotaxis response regulator protein-glutamate methylesterase, CheB, with N-terminal REC ...
 346-490 1.01e-22

Chemotaxis response regulator protein-glutamate methylesterase, CheB, with N-terminal REC domain; This family contains the methylesterase CheB (EC 3.1.1.61; also known as CheB methylesterase, chemotaxis-specific methylesterase, methyl-accepting chemotaxis protein methyl-esterase, or protein methyl-esterase) domain with a REC domain at the N-terminus. CheB is a phosphorylation-activated response regulator involved in reversible modification of bacterial chemotaxis receptors. Signaling output of the chemotaxis receptors is modulated by CheB and methyltransferase CheR by controlling the level of receptor methylation. The N-terminal regulatory (REC) domain blocks the active site of the C-terminal domain until it is phosphorylated. Reversible methylation of transmembrane chemoreceptors plays an important role in ligand-dependent signaling and cellular adaptation in bacterial chemotaxis. Phosphorylated CheB catalyzes deamidation of specific glutamine residues in the cytoplasmic region of the chemoreceptors and demethylation of specific methyl glutamate residues introduced into the chemoreceptors by CheR.


Pssm-ID: 319751  Cd Length: 184  Bit Score: 95.51  E-value: 1.01e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 346 VVLLGAATDGIDAVCTFLAALPASTRQTFLLTQHLGRQSDASLVAEFSANCALPVRLAKAG-RAKPGEVLLVPAGQQVRL 424
Cdd:cd16432    1 LVAIGASTGGPQALQEILSALPADFPAPILIVQHMPPGFTKSFAERLNRLSALPVKEAEDGePLEPGTVYIAPGGYHLVV 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 653309642 425 RRDGN---IELQandaDAPPE----PSIDASLTMAANAFGRDALAIVFAGRGNDAVAGAQAVHDRGGQVWVES 490
Cdd:cd16432   81 ERRGGggrIRLS----DGPPVnghrPSVDVLFRSAAEVYGARALGVILTGMGRDGAEGLLALKEAGGYTIAQD 149
PRK00742 PRK00742
chemotaxis-specific protein-glutamate methyltransferase CheB;
344-490 1.05e-16

chemotaxis-specific protein-glutamate methyltransferase CheB;


Pssm-ID: 234828 [Multi-domain]  Cd Length: 354  Bit Score: 81.73  E-value: 1.05e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 344 SKVVLLGAATDGIDAVCTFLAALPASTRQTFLLTQHLGRQSDASLVAEFSANCALPVRLAKAG-RAKPGEVLLVPAGQQV 422
Cdd:PRK00742 164 SKLVAIGTSTGGPEALQKVLTPLPANFPAPILIVQHMPAGFTKSFAERLNRLCQIEVKEAEDGeRLKPGHAYIAPGGKHM 243

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 653309642 423 RLRRDGN---IELQANDADAPPEPSIDASLTMAANAFGRDALAIVFAGRGNDAVAGAQAVHDRGGQVWVES 490
Cdd:PRK00742 244 MVARSGAnyrIKLDDGPPVNRHRPSVDVLFRSAAKAAGRNALGVILTGMGRDGAAGLLEMKQAGATTIAQD 314
 
Name Accession Description Interval E-value
CheB COG2201
Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains ...
 345-526 2.09e-29

Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains [Signal transduction mechanisms];


Pssm-ID: 441803  Cd Length: 193  Bit Score: 114.41  E-value: 2.09e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 345 KVVLLGAATDGIDAVCTFLAALPASTRQTFLLTQHLGRQSDASLVAEFSANCALPVRLAKAG-RAKPGEVLLVPAGQQVR 423
Cdd:COG2201    4 KVVAIGASTGGPEALEEVLSALPADFPAPIVIVQHMPPGFTSSLAERLNRLTALPVKEAEDGeRLEPGHVYIAPGGRHLE 83

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 424 LRRDGN--IELQANDADAPPEPSIDASLTMAANAFGRDALAIVFAGRGNDAVAGAQAVHDRGGQVWVES-SSGEHFaDMV 500
Cdd:COG2201   84 VERSGGyrLRLSDGPPVNGHRPSVDVLFRSLAEVYGERAVGVILTGMGSDGAEGLKAIKEAGGLTIAQDeESCVVY-GMP 162

                        170       180
                 ....*....|....*....|....*.
gi 653309642 501 SGIFAERLVSFSGTPSELAAHLIEVF 526
Cdd:COG2201  163 RAAIEAGAVDEVLPLEEIAAALLRLL 188
CheB_methylest pfam01339
CheB methylesterase;
347-522 2.03e-25

CheB methylesterase;


Pssm-ID: 460166  Cd Length: 178  Bit Score: 102.89  E-value: 2.03e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642  347 VLLGAATDGIDAVCTFLAALPASTRQTFLLTQHLGRQSDASLVAEFSANCALPVRLAKAG-RAKPGEVLLVPAGQQVRLR 425
Cdd:pfam01339   1 VAIGASTGGPEALEELLPALPADLPAAIVVVQHMPPGFTSSLAERLNRLSALPVKEAEDGePLEPGTVYIAPGGYHLLVE 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642  426 RDGNIELQANDADAPPEPSIDASLTMAANAF-GRDALAIVFAGRGNDAVAGAQAVHDRGGQVWVESSSGEHFADMVSGIF 504
Cdd:pfam01339  81 DGRGPYRSDGPPVNGHRPSIDVLFRSLAEAYgGKRAIGVILTGMGSDGAAGLKAIKEAGGLTIAQDPATAVVYGMPRAAI 160

                         170
                  ....*....|....*...
gi 653309642  505 AERLVSFSGTPSELAAHL 522
Cdd:pfam01339 161 EAGAADFVLPLEEIAAEL 178
CheB_Rec cd16432
Chemotaxis response regulator protein-glutamate methylesterase, CheB, with N-terminal REC ...
 346-490 1.01e-22

Chemotaxis response regulator protein-glutamate methylesterase, CheB, with N-terminal REC domain; This family contains the methylesterase CheB (EC 3.1.1.61; also known as CheB methylesterase, chemotaxis-specific methylesterase, methyl-accepting chemotaxis protein methyl-esterase, or protein methyl-esterase) domain with a REC domain at the N-terminus. CheB is a phosphorylation-activated response regulator involved in reversible modification of bacterial chemotaxis receptors. Signaling output of the chemotaxis receptors is modulated by CheB and methyltransferase CheR by controlling the level of receptor methylation. The N-terminal regulatory (REC) domain blocks the active site of the C-terminal domain until it is phosphorylated. Reversible methylation of transmembrane chemoreceptors plays an important role in ligand-dependent signaling and cellular adaptation in bacterial chemotaxis. Phosphorylated CheB catalyzes deamidation of specific glutamine residues in the cytoplasmic region of the chemoreceptors and demethylation of specific methyl glutamate residues introduced into the chemoreceptors by CheR.


Pssm-ID: 319751  Cd Length: 184  Bit Score: 95.51  E-value: 1.01e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 346 VVLLGAATDGIDAVCTFLAALPASTRQTFLLTQHLGRQSDASLVAEFSANCALPVRLAKAG-RAKPGEVLLVPAGQQVRL 424
Cdd:cd16432    1 LVAIGASTGGPQALQEILSALPADFPAPILIVQHMPPGFTKSFAERLNRLSALPVKEAEDGePLEPGTVYIAPGGYHLVV 80

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 653309642 425 RRDGN---IELQandaDAPPE----PSIDASLTMAANAFGRDALAIVFAGRGNDAVAGAQAVHDRGGQVWVES 490
Cdd:cd16432   81 ERRGGggrIRLS----DGPPVnghrPSVDVLFRSAAEVYGARALGVILTGMGRDGAEGLLALKEAGGYTIAQD 149
CheB cd16433
Chemotaxis response regulator protein-glutamate methylesterase, CheB; This family contains the ...
 346-524 4.76e-22

Chemotaxis response regulator protein-glutamate methylesterase, CheB; This family contains the methylesterase CheB (EC 3.1.1.61; also known as CheB methylesterase, chemotaxis-specific methylesterase, methyl-accepting chemotaxis protein methyl-esterase, or protein methyl-esterase) domain, a phosphorylation-activated response regulator involved in reversible modification of bacterial chemotaxis receptors. Signaling output of the chemotaxis receptors is modulated by CheB and methyltransferase CheR by controlling the level of receptor methylation. cheR and cheB have a strong preference to occur in the same operon, and a subgroup contains multidomain proteins with CheB-CheR fusions. Reversible methylation of transmembrane chemoreceptors plays an important role in ligand-dependent signaling and cellular adaptation in bacterial chemotaxis. Phosphorylated CheB catalyzes deamidation of specific glutamine residues in the cytoplasmic region of the chemoreceptors and demethylation of specific methyl glutamate residues introduced into the chemoreceptors by CheR.


Pssm-ID: 319752  Cd Length: 181  Bit Score: 93.21  E-value: 4.76e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 346 VVLLGAATDGIDAVCTFLAALPASTRQTFLLTQHLGRQSDASLVAEFSANCALPVRLAKAG-RAKPGEVLLVPAGQQVRL 424
Cdd:cd16433    1 IVVIGASAGGLEALLELLSALPADFPAPVLVVLHRPPDSPSVLPELLSRRTPLPVKEAEDGePIEPGTIYVAPPDYHLLV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 425 RRDGNIELqandADAPPE----PSIDASLTMAANAFGRDALAIVFAGRGNDAVAGAQAVHDRGGQVWVESSSGEHFADMV 500
Cdd:cd16433   81 EDDGTFSL----SRGPKVnfsrPSIDVLFRSAADAYGPRVIGVVLTGANDDGAAGLAAIKRAGGLTIVQDPATAEVPSMP 156

                        170       180
                 ....*....|....*....|....
gi 653309642 501 SGIFAERLVSFSGTPSELAAHLIE 524
Cdd:cd16433  157 RAALAAVAVDHVLPLAEIAALLVR 180
CheB-CheR_fusion cd16434
Chemotaxis response regulator protein-glutamate methylesterase, CheB, fused with CheR domain; ...
 346-524 3.86e-20

Chemotaxis response regulator protein-glutamate methylesterase, CheB, fused with CheR domain; This family contains the methylesterase CheB (EC 3.1.1.61; also known as CheB methylesterase, chemotaxis-specific methylesterase, methyl-accepting chemotaxis protein methyl-esterase, or protein methyl-esterase) domain, a phosphorylation-activated response regulator involved in reversible modification of bacterial chemotaxis receptors, fused with a CheR domain as well as other domains. Signaling output of the chemotaxis receptors is modulated by CheB and methyltransferase CheR by controlling the level of receptor methylation. cheB and cheR are typically found in the same operon. However, CheB and CheR are fused in multi-domain proteins in this subgroup. The CheR protein/domain includes an all-alpha N-terminal domain and an S-adenosylmethionine-dependent methyltransferase C-terminal domain. Reversible methylation of transmembrane chemoreceptors plays an important role in ligand-dependent signaling and cellular adaptation in bacterial chemotaxis. Phosphorylated CheB catalyzes deamidation of specific glutamine residues in the cytoplasmic region of the chemoreceptors and demethylation of specific methyl glutamate residues introduced into the chemoreceptors by CheR.


Pssm-ID: 319753  Cd Length: 180  Bit Score: 87.81  E-value: 3.86e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 346 VVLLGAATDGIDAVCTFLAALPASTRQTFLLTQHLGRQSDASLVAEFSANCALPVRLAKAG-RAKPGEVLLVPAGQQVRL 424
Cdd:cd16434    1 VVGIGASAGGLEALEEFFSALPADSGMAFVVVQHLSPDHKSLLAELLARHTSMPVVEAEDGmRVEPNHVYVIPPGKDLTI 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 425 rRDGNIELQANDADAPPEPSIDASLTMAANAFGRDALAIVFAGRGNDAVAGAQAVHDRGGQVWVESSSGEHFADMVSGIF 504
Cdd:cd16434   81 -EDGRLRLSPPDEPRGPRLPIDVFFRSLAEDQGERAIGVILSGTGSDGTLGLKAIKEAGGLVLAQDPETAKFDGMPRSAI 159

                        170       180
                 ....*....|....*....|
gi 653309642 505 AERLVSFSGTPSELAAHLIE 524
Cdd:cd16434  160 ATGLVDFVLPPEEIAAELLA 179
PRK00742 PRK00742
chemotaxis-specific protein-glutamate methyltransferase CheB;
344-490 1.05e-16

chemotaxis-specific protein-glutamate methyltransferase CheB;


Pssm-ID: 234828 [Multi-domain]  Cd Length: 354  Bit Score: 81.73  E-value: 1.05e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 344 SKVVLLGAATDGIDAVCTFLAALPASTRQTFLLTQHLGRQSDASLVAEFSANCALPVRLAKAG-RAKPGEVLLVPAGQQV 422
Cdd:PRK00742 164 SKLVAIGTSTGGPEALQKVLTPLPANFPAPILIVQHMPAGFTKSFAERLNRLCQIEVKEAEDGeRLKPGHAYIAPGGKHM 243

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 653309642 423 RLRRDGN---IELQANDADAPPEPSIDASLTMAANAFGRDALAIVFAGRGNDAVAGAQAVHDRGGQVWVES 490
Cdd:PRK00742 244 MVARSGAnyrIKLDDGPPVNRHRPSVDVLFRSAAKAAGRNALGVILTGMGRDGAAGLLEMKQAGATTIAQD 314
CheB_like cd16351
methylesterase CheB domain family; This family contains the methylesterase CheB (EC 3.1.1.61; ...
 346-525 3.81e-16

methylesterase CheB domain family; This family contains the methylesterase CheB (EC 3.1.1.61; also known as CheB methylesterase, chemotaxis-specific methylesterase, methyl-accepting chemotaxis protein methyl-esterase, or protein methyl-esterase) domain, a phosphorylation-activated response regulator involved in reversible modification of bacterial chemotaxis receptors. Signaling output of the chemotaxis receptors is modulated by CheB and methyltransferase CheR by controlling the level of receptor methylation. CheB family members may also contain an N-terminal regulatory (REC) domain, which blocks the active site of the C-terminal domain until it is phosphorylated, or a CheR domain; typically cheB and cheR occur in the same operon. Reversible methylation of transmembrane chemoreceptors plays an important role in ligand-dependent signaling and cellular adaptation in bacterial chemotaxis. Phosphorylated CheB catalyzes deamidation of specific glutamine residues in the cytoplasmic region of the chemoreceptors and demethylation of specific methyl glutamate residues introduced into the chemoreceptors by CheR.


Pssm-ID: 319750  Cd Length: 184  Bit Score: 76.45  E-value: 3.81e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 346 VVLLGAATDGIDAVCTFLAALPASTRQTFLLTQHLGRQSDASLVAEFSANCALPVRLAKAG-RAKPGEVLLVPAGQQVRL 424
Cdd:cd16351    1 IVGIGASTGGLEALEHLFEQLPIHSGLVYVVIQHMPPGFTSSMAERLGKKTKVGVKEAEDGePVEPGTIYIAPGDTHINL 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 425 RRDGN---IELQANDADAPPEPSIDASLTMAANAFGRDALAIVFAGRGNDAVAGAQAVHDRGGQVWVESSSGEHFADMVS 501
Cdd:cd16351   81 ENGKGfkvQELSNDTGINNLRPPVDHFFSSLAKYNKEKSIAVILTGMGNDGSSGLSYVYDTGGTVIAQTEESCVVFGMPN 160

                        170       180
                 ....*....|....*....|....
gi 653309642 502 GIFAERLVSFSGTPSELAAHLIEV 525
Cdd:cd16351  161 YAIQTGKVDHVVRPEEMASLFEQI 184
PRK12555 PRK12555
chemotaxis-specific protein-glutamate methyltransferase CheB;
341-483 1.75e-15

chemotaxis-specific protein-glutamate methyltransferase CheB;


Pssm-ID: 237135 [Multi-domain]  Cd Length: 337  Bit Score: 77.61  E-value: 1.75e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 653309642 341 GALSKVVLLGAATDGIDAVCTFLAALPASTRQTFLLTQHLGRQSDASLVAEFSANCALPVRLAKAG-RAKPGEVLLVPAG 419
Cdd:PRK12555 150 RTTPRLVAIGASAGGPAALAVLLGGLPADFPAAIVIVQHVDAAFAAGMAEWLDGQTALPVREAREGeRPQPGHVLLAPTN 229

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 653309642 420 QQVRLRRDGNIELQANDADAPPEPSIDASLTMAANAFGRDALAIVFAGRGNDAVAGAQAVHDRG 483
Cdd:PRK12555 230 DHLRLTRDGALRYTREPPVNPYRPSVDVFFESVAQHWGGNAIGVLLTGMGRDGARGLKAMRQAG 293
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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