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Conserved domains on  [gi|654550071|ref|WP_028017768|]
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MULTISPECIES: phosphate ABC transporter permease PstC [Enterobacterales]

Protein Classification

phosphate ABC transporter permease subunit PstC( domain architecture ID 10793554)

phosphate ABC transporter permease subunit PstC is the transmembrane subunit (TM) found in periplasmic binding protein (PBP)-dependent ATP-binding cassette (ABC) transporter for phosphate; ABC transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment; the captured solute is delivered to a gated translocation pathway formed by the two TMs

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List of domain hits

 Name Accession Description Interval E-value
pstC PRK11275
phosphate ABC transporter permease PstC;
1-319 0e+00

phosphate ABC transporter permease PstC;


:

Pssm-ID: 183070  Cd Length: 319  Bit Score: 588.59  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071   1 MAATKPAFNPPGKKGDMIFSALVKLAALIVLLLLGGIIVSLIFSSWPSIQKFGFSFLWTKEWDAPNDIYGALVPIYGTLV 80
Cdd:PRK11275   1 MAATKPAFNAPGKKGDIIFSALVKLAALITLLLLGGIIVSLIISSWPSIQKFGLSFLWTKEWDAPNDIYGALVPIYGTLV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  81 TSFIALLIAVPVSFGIALFLTELAPGWLRRPLGIAIELLAAIPSIVYGMWGLFIFAPLFATYFQEPVGNVLSAIPFVGAL 160
Cdd:PRK11275  81 TSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFVFAPLFATYFQEPVGNVLSNIPIVGAL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 161 FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALG 240
Cdd:PRK11275 161 FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALG 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 654550071 241 ETMAVTFIIGNTYQLDSASLFMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFIVLAISKLMIMRLAKNEGAR 319
Cdd:PRK11275 241 ETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHTAALMELGLILFVITFIVLAASKLMIMRLAKNEGAR 319
 
Name Accession Description Interval E-value
pstC PRK11275
phosphate ABC transporter permease PstC;
1-319 0e+00

phosphate ABC transporter permease PstC;


Pssm-ID: 183070  Cd Length: 319  Bit Score: 588.59  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071   1 MAATKPAFNPPGKKGDMIFSALVKLAALIVLLLLGGIIVSLIFSSWPSIQKFGFSFLWTKEWDAPNDIYGALVPIYGTLV 80
Cdd:PRK11275   1 MAATKPAFNAPGKKGDIIFSALVKLAALITLLLLGGIIVSLIISSWPSIQKFGLSFLWTKEWDAPNDIYGALVPIYGTLV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  81 TSFIALLIAVPVSFGIALFLTELAPGWLRRPLGIAIELLAAIPSIVYGMWGLFIFAPLFATYFQEPVGNVLSAIPFVGAL 160
Cdd:PRK11275  81 TSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFVFAPLFATYFQEPVGNVLSNIPIVGAL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 161 FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALG 240
Cdd:PRK11275 161 FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALG 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 654550071 241 ETMAVTFIIGNTYQLDSASLFMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFIVLAISKLMIMRLAKNEGAR 319
Cdd:PRK11275 241 ETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHTAALMELGLILFVITFIVLAASKLMIMRLAKNEGAR 319
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 9-317 7.97e-112

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 326.28  E-value: 7.97e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071   9 NPPGKKGDMIFSALVKLAALIVLLLLGGIIVSLIFSSWPSIQKFGF-SFLWTKEWD--APNDIYGALVPIYGTLVTSFIA 85
Cdd:COG0573   10 RRRRRLGDRLFRGLLLLAALLSILILLLIVLFLLIESLPAFQEVGLlEFLTGTEWNpvSSNGEFGILPLIVGTLLVSLIA 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  86 LLIAVPVSFGIALFLTELAPGWLRRPLGIAIELLAAIPSIVYGMWGLFIFAPLFATYFQepvgnvlsaipfvgalfsGPA 165
Cdd:COG0573   90 LLIAVPLGLGIAIFLSEYAPPRLRRILKPAIELLAGIPSVVYGFWGLFVLVPLLRDLFP------------------WPP 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 166 FGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMAV 245
Cdd:COG0573  152 SGFSLLTAGIVLAIMILPTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETMAV 231

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 654550071 246 TFIIGNTYQLdSASLFMPGNSITSALANEFAEAE-SGLHVAALMELGLILFVITFIVLAISKLMIMRLAKNEG 317
Cdd:COG0573  232 LMVAGNAPQI-PFSLFDPGRTLTALIALEFGEAPfGSLHYSALFALGLVLFVITLLVNLLARLIVRRYREKYG 303
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 16-311 2.75e-90

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 271.06  E-value: 2.75e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071   16 DMIFSALVKLAALIVLLLLGGIIVSLIFSSWPSIQKFG-FSFLWTKEWDAPN----DIYGALVPIYGTLVTSFIALLIAV 90
Cdd:TIGR02138   1 EKIFKGLLLFSAVIIVLVLLLIVLFLLYEAIPAFEKNGiLNFLTGTVWDPGSgpvqEQYGALPLIVGTLITSLIALLIAV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071   91 PVSFGIALFLTELAPGWLRRPLGIAIELLAAIPSIVYGMWGLFIFAPLFATYFQEPVGNVLSAIPFvgalfsgpaFGIGI 170
Cdd:TIGR02138  81 PVGIGIAIFLSEIAPKRVRSVLKPVVELLAGIPSVVYGFWGLFVLVPFLKPHFQPFLGSNLGLIPL---------FGGPI 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  171 LAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMAVTFIIG 250
Cdd:TIGR02138 152 LTAGIVLAIMILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVIG 231

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 654550071  251 NTYQLDSASLFMPGNSITSALANEFAEAESG-LHVAALMELGLILFVITFIVLAISKLMIMR 311
Cdd:TIGR02138 232 NVFPISPLSLFDPGTTITSLIANQFGEASGGsVHTSALFALGLVLFVITLLVNILARYIVRR 293
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 75-254 2.62e-13

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 67.30  E-value: 2.62e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  75 IYGTLVTSFIALLIAVPVSFGIALFLTELaPGWLRRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAtyfqepvgnvlsai 154
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLG-------------- 65

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 155 pfvgalfsGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLG 234
Cdd:cd06261   66 --------WGILPGLGLPALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLA 137

                        170       180
                 ....*....|....*....|
gi 654550071 235 LGRALGETMAVTFIIGNTYQ 254
Cdd:cd06261  138 FARALGEFALVSFLGGGEAP 157
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 154-252 4.02e-05

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 43.44  E-value: 4.02e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  154 IPFVGALFSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVML 233
Cdd:pfam00528  36 AILLVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLAL 115

                          90
                  ....*....|....*....
gi 654550071  234 GLGRALGETMAVTFIIGNT 252
Cdd:pfam00528 116 AFGGALGGAVLLEFLGSWP 134
 
Name Accession Description Interval E-value
pstC PRK11275
phosphate ABC transporter permease PstC;
1-319 0e+00

phosphate ABC transporter permease PstC;


Pssm-ID: 183070  Cd Length: 319  Bit Score: 588.59  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071   1 MAATKPAFNPPGKKGDMIFSALVKLAALIVLLLLGGIIVSLIFSSWPSIQKFGFSFLWTKEWDAPNDIYGALVPIYGTLV 80
Cdd:PRK11275   1 MAATKPAFNAPGKKGDIIFSALVKLAALITLLLLGGIIVSLIISSWPSIQKFGLSFLWTKEWDAPNDIYGALVPIYGTLV 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  81 TSFIALLIAVPVSFGIALFLTELAPGWLRRPLGIAIELLAAIPSIVYGMWGLFIFAPLFATYFQEPVGNVLSAIPFVGAL 160
Cdd:PRK11275  81 TSFIALLIAVPVSFGIALFLTELAPGWLKRPLGIAIELLAAIPSIVYGMWGLFVFAPLFATYFQEPVGNVLSNIPIVGAL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 161 FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALG 240
Cdd:PRK11275 161 FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALG 240

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 654550071 241 ETMAVTFIIGNTYQLDSASLFMPGNSITSALANEFAEAESGLHVAALMELGLILFVITFIVLAISKLMIMRLAKNEGAR 319
Cdd:PRK11275 241 ETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFAEAESGLHTAALMELGLILFVITFIVLAASKLMIMRLAKNEGAR 319
PstC COG0573
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 9-317 7.97e-112

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440338 [Multi-domain]  Cd Length: 303  Bit Score: 326.28  E-value: 7.97e-112
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071   9 NPPGKKGDMIFSALVKLAALIVLLLLGGIIVSLIFSSWPSIQKFGF-SFLWTKEWD--APNDIYGALVPIYGTLVTSFIA 85
Cdd:COG0573   10 RRRRRLGDRLFRGLLLLAALLSILILLLIVLFLLIESLPAFQEVGLlEFLTGTEWNpvSSNGEFGILPLIVGTLLVSLIA 89

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  86 LLIAVPVSFGIALFLTELAPGWLRRPLGIAIELLAAIPSIVYGMWGLFIFAPLFATYFQepvgnvlsaipfvgalfsGPA 165
Cdd:COG0573   90 LLIAVPLGLGIAIFLSEYAPPRLRRILKPAIELLAGIPSVVYGFWGLFVLVPLLRDLFP------------------WPP 151

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 166 FGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMAV 245
Cdd:COG0573  152 SGFSLLTAGIVLAIMILPTITSLSRDALRAVPRSLREAALALGATRWETIRKVVLPAARSGIIAAVILGLGRALGETMAV 231

                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 654550071 246 TFIIGNTYQLdSASLFMPGNSITSALANEFAEAE-SGLHVAALMELGLILFVITFIVLAISKLMIMRLAKNEG 317
Cdd:COG0573  232 LMVAGNAPQI-PFSLFDPGRTLTALIALEFGEAPfGSLHYSALFALGLVLFVITLLVNLLARLIVRRYREKYG 303
phosphate_pstC TIGR02138
phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity ...
 16-311 2.75e-90

phosphate ABC transporter, permease protein PstC; The typical operon for the high affinity inorganic phosphate ABC transporter encodes an ATP-binding protein, a phosphate-binding protein, and two permease proteins. This family consists of one of the two permease proteins, PstC, which is homologous to PstA (TIGR00974). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273992 [Multi-domain]  Cd Length: 295  Bit Score: 271.06  E-value: 2.75e-90
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071   16 DMIFSALVKLAALIVLLLLGGIIVSLIFSSWPSIQKFG-FSFLWTKEWDAPN----DIYGALVPIYGTLVTSFIALLIAV 90
Cdd:TIGR02138   1 EKIFKGLLLFSAVIIVLVLLLIVLFLLYEAIPAFEKNGiLNFLTGTVWDPGSgpvqEQYGALPLIVGTLITSLIALLIAV 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071   91 PVSFGIALFLTELAPGWLRRPLGIAIELLAAIPSIVYGMWGLFIFAPLFATYFQEPVGNVLSAIPFvgalfsgpaFGIGI 170
Cdd:TIGR02138  81 PVGIGIAIFLSEIAPKRVRSVLKPVVELLAGIPSVVYGFWGLFVLVPFLKPHFQPFLGSNLGLIPL---------FGGPI 151

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  171 LAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMAVTFIIG 250
Cdd:TIGR02138 152 LTAGIVLAIMILPTIASISRDALRAVPRSYKEASYALGATKWETIRRVILPAARSGIVGAVVLGLGRALGETMAVTMVIG 231

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 654550071  251 NTYQLDSASLFMPGNSITSALANEFAEAESG-LHVAALMELGLILFVITFIVLAISKLMIMR 311
Cdd:TIGR02138 232 NVFPISPLSLFDPGTTITSLIANQFGEASGGsVHTSALFALGLVLFVITLLVNILARYIVRR 293
PstA COG0581
ABC-type phosphate transport system, permease component [Inorganic ion transport and ...
 70-304 1.87e-36

ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440346 [Multi-domain]  Cd Length: 259  Bit Score: 131.31  E-value: 1.87e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  70 GALVPIYGTLVTSFIALLIAVPVSFGIALFLTELAP-GWLRRPLGIAIELLAAIPSIVYGmwgLFIFApLFATYFQepvg 148
Cdd:COG0581   38 GILPAIVGTLLLVLLATLIAVPLGVLAAIYLAEYARgGRLARLIRFAIDVLAGVPSIVYG---LFGYA-LFVLTLG---- 109

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 149 nvlsaipfvgalfsgpaFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVI 228
Cdd:COG0581  110 -----------------LGFSLLAGALALALLMLPVVIRTTEEALRLVPNSLREASYALGATKWQTIRKVVLPAALPGIL 172

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 654550071 229 GGVMLGLGRALGETMAVTFIIGNTYQLdSASLFMPGNSITSALANEFAEA-ESGLHVAALMELGLILFVITFIVLAI 304
Cdd:COG0581  173 TGVILAIARAAGETAPLLFTAGVSPFL-PLSLFDPFATLPVHIYNLASSPyPAAQELAWAAALVLLLLVLLLNLLAR 248
3a0107s02c TIGR00974
phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of ...
 57-304 5.13e-27

phosphate ABC transporter, permease protein PstA; This model describes PtsA, one of a pair of permease proteins in the ABC (high affinity) phosphate transporter. In a number of species, this permease is fused with the PtsC protein (TIGR02138). In the model bacterium Escherichia coli, this transport system is induced when the concentration of extrallular inorganic phosphate is low. A constitutive, lower affinity transporter operates otherwise. [Transport and binding proteins, Anions]


Pssm-ID: 273373  Cd Length: 271  Bit Score: 106.94  E-value: 5.13e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071   57 LWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTELA-PGWLRRPLGIAIELLAAIPSIVYGmwgLFIF 135
Cdd:TIGR00974  38 FFTKSPTPTGAEGGIGPAIVGTLLLTLLAIVIAVPLGIGAAIYLAEYAnGSRFTKIIRFAVDILAGVPSIVVG---LFGY 114

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  136 APLFATYFqepvgnvlsaipfvgalfsgpAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVI 215
Cdd:TIGR00974 115 GFFVLTYL---------------------GGGFSLLAGALALALLILPVIIRTTEEALKAVPKDLREASLALGATKWQTI 173

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  216 WRIVLPFTKNGVIGGVMLGLGRALGETMAVTFIIGNTYQLdSASLFMPGNSITSALANEFAE--AESGLHVAALMELGLI 293
Cdd:TIGR00974 174 FKVVLPAALPGILTGIILSIARAAGETAPLLFTAGGSAFT-PPNLFDPFATLPVLIYNLASEgpYVEAQQLAWAAALVLI 252

                         250
                  ....*....|.
gi 654550071  294 LFVITFIVLAI 304
Cdd:TIGR00974 253 VLVLLLNLIAR 263
TM_PBP2 cd06261
Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding ...
 75-254 2.62e-13

Transmembrane subunit (TM) found in Periplasmic Binding Protein (PBP)-dependent ATP-Binding Cassette (ABC) transporters which generally bind type 2 PBPs. These types of transporters consist of a PBP, two TMs, and two cytoplasmic ABC ATPase subunits, and are mainly involved in importing solutes from the environment. The solute is captured by the PBP which delivers it to a gated translocation pathway formed by the two TMs. The two ABCs bind and hydrolyze ATP and drive the transport reaction. For these transporters the ABCs and TMs are on independent polypeptide chains. These systems transport a diverse range of substrates. Most are specific for a single substrate or a group of related substrates; however some transporters are more promiscuous, transporting structurally diverse substrates such as the histidine/lysine and arginine transporter in Enterobacteriaceae. In the latter case, this is achieved through binding different PBPs with different specificities to the TMs. For other promiscuous transporters such as the multiple-sugar transporter Msm of Streptococcus mutans, the PBP has a wide substrate specificity. These transporters include the maltose-maltodextrin, phosphate and sulfate transporters, among others.


Pssm-ID: 119394 [Multi-domain]  Cd Length: 190  Bit Score: 67.30  E-value: 2.62e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  75 IYGTLVTSFIALLIAVPVSFGIALFLTELaPGWLRRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAtyfqepvgnvlsai 154
Cdd:cd06261    1 LLNTLLLALIATLLALVLGLLLGIILARK-RGKLDRLLRRIIDLLLSLPSLVLGLLLVLLFGVLLG-------------- 65

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 155 pfvgalfsGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLG 234
Cdd:cd06261   66 --------WGILPGLGLPALILALLLIAPFARLIRRAALESIPKDLVEAARALGASPWQIFRRIILPLALPPILTGLVLA 137

                        170       180
                 ....*....|....*....|
gi 654550071 235 LGRALGETMAVTFIIGNTYQ 254
Cdd:cd06261  138 FARALGEFALVSFLGGGEAP 157
CysU COG0555
ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism]; ...
 78-253 1.51e-12

ABC-type sulfate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440321 [Multi-domain]  Cd Length: 268  Bit Score: 66.31  E-value: 1.51e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  78 TLVTSFIALLIAVPVSFGIALFLTELaPGWLRRPLGIAIELLAAIPSIVYGMWGLFIFAPLfatyfqepvgnvlsaiPFV 157
Cdd:COG0555   59 SLGTALIAALINLVFGLPLAWVLVRY-RFPGKRLVDALVDLPFALPTAVAGIALLLLFGPN----------------GWL 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 158 GALFSgpAFGIGIL--AAGVILAIMII--PYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVML 233
Cdd:COG0555  122 GQLLA--PLGIKVAftPLGIVLAQTFVslPFVVRTVQPVLEELDPELEEAAATLGASRWQTFRRVILPLLLPALLTGFAL 199

                        170       180
                 ....*....|....*....|
gi 654550071 234 GLGRALGETMAVTFIIGNTY 253
Cdd:COG0555  200 AFARALGEFGAVIFIAGNLP 219
COG4590 COG4590
ABC-type uncharacterized transport system, permease component [General function prediction ...
 72-301 3.17e-09

ABC-type uncharacterized transport system, permease component [General function prediction only];


Pssm-ID: 443647 [Multi-domain]  Cd Length: 757  Bit Score: 57.93  E-value: 3.17e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  72 LVPI-YGTLVTSFIALLIAVPVSFGIALFlTE--LAPGwLRRPLGIAIELLAAIPSIVYG-MWGLFiFAPL--------F 139
Cdd:COG4590  451 LVPLtFGTLKAAFYAMLFAVPLAIAGAIY-TAyfMSPK-MRGVVKPTIEIMEALPTVILGfLAGLW-LAPFveenlpgvF 527

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 140 ATYFQEPVGNVLSA-----------------------IP---FVG------------ALFSGPA-------FGIGI---- 170
Cdd:COG4590  528 SLLLLLPLGILLFAylwsrlpesirnrvpegweaallIPvilLVGwlcfalsppienAFFGGDMrqwltneLGITFdqrn 607

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 171 -LAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMAVTFII 249
Cdd:COG4590  608 aLVVGIAMGFAVIPTIFSIAEDAIFSVPKHLTQGSLALGATPWQTLTRVVLLTASPGIFSAVMIGLGRAVGETMIVLMAT 687

                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 654550071 250 GNTYQLDsASLFMPGNSITSALANEFAEAESG------LHVAAlmelgLILFVITFIV 301
Cdd:COG4590  688 GNTPVMD-FNIFEGMRTLSANIAVEMPESEVGsthyrvLFLAA-----LVLFVFTFVF 739
pstA PRK11268
phosphate ABC transporter permease PstA;
57-247 3.38e-09

phosphate ABC transporter permease PstA;


Pssm-ID: 183065 [Multi-domain]  Cd Length: 295  Bit Score: 57.00  E-value: 3.38e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  57 LWTKEWDAPNDIYGALV-PIYGTLVTSFIALLIAVPVSFGIALFLTELAP-GWLRRPLGIAIELLAAIPSIVYGmwgLFI 134
Cdd:PRK11268  64 LFTEMTPPPNTAGGGLAnAIAGSGLLILWATVVGTPLGIMAGIYLAEYGRkSWLAEVIRFINDILLSAPSIVVG---LFV 140

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 135 FApLFATYFQEpvgnvlsaipfvgalFSGPAfgiGILAagviLAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEV 214
Cdd:PRK11268 141 YT-IVVAQMEH---------------FSGWA---GVIA----LALLQIPIVIRTTENMLKLVPDSLREAAYALGTPKWKM 197

                        170       180       190
                 ....*....|....*....|....*....|...
gi 654550071 215 IWRIVLPFTKNGVIGGVMLGLGRALGETMAVTF 247
Cdd:PRK11268 198 ISAITLKASVSGIMTGVLLAIARIAGETAPLLF 230
PotC COG1177
ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport ...
 79-315 1.42e-08

ABC-type spermidine/putrescine transport system, permease component II [Amino acid transport and metabolism];


Pssm-ID: 440790 [Multi-domain]  Cd Length: 262  Bit Score: 54.73  E-value: 1.42e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  79 LVTSFIALLIAVPVSFGIALFltelaPGWLRRPLGIAIELLAAIPSIVYGMwGLFIFaplfatyfqepvgnvLSAIPFVG 158
Cdd:COG1177   71 LLSTLLATVLGTPAALALARY-----RFRGRRLLLALLLLPLVVPGIVLGV-ALLLL---------------FSALGLSG 129

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 159 ALFsgpafgigilaaGVILA--IMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLG 236
Cdd:COG1177  130 GLW------------GLILAhvVFTLPFVVLVVLARLQGFDPSLEEAARDLGASPWQTFRRVTLPLIAPGILAGALLAFT 197

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 654550071 237 RALGETMAVTFIIGNTYQLDSASLFmpgNSITSALANEfaeaesglhVAAlmeLGLILFVITFIVLAISKLMIMRLAKN 315
Cdd:COG1177  198 LSFDEFVITLFLAGPGVTTLPVYIY---SMIRRGISPE---------INA---LSTLLILLSLLLLLLAERLRRRGERR 261
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
40-304 1.48e-07

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 52.47  E-value: 1.48e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  40 SLIFSSWPSIQKFGFSFLWtkeWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIAlFLTELAPGWLRRPLGIAIELL 119
Cdd:COG1178  308 ALLLWSLTKALDDNLTLDN---YRFVLLDPSLLRALLNSLLLALLAALLAVLLALLLA-YLVRRRRGRLARLLDRLAMLP 383

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 120 AAIPSIVYGMwGLFIFAplfatyfqepvgnvlsaIPFVGALFSGPAFGIgILAagviLAIMIIPYIAAVMRDVFEQTPVM 199
Cdd:COG1178  384 YAVPGIVLGL-GLLLLF-----------------NRPLPLLLYGTLAIL-VLA----YVVRFLPFALRSLEAALAQIDPS 440

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 200 MKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGEtmavtfiigntyqLDSASLFMPGNSITSALA-NEFAEA 278
Cdd:COG1178  441 LEEAARSLGASPLRTLRRVTLPLLRPGLLAAALLVFVTSMKE-------------LSATLLLRPPGFETLAVLiYQLASS 507

                        250       260
                 ....*....|....*....|....*.
gi 654550071 279 ESgLHVAALMelGLILFVITFIVLAI 304
Cdd:COG1178  508 GR-YGEAAAL--ALLLVLVSLLPVLL 530
cysT CHL00187
sulfate transport protein; Provisional
 78-251 7.20e-07

sulfate transport protein; Provisional


Pssm-ID: 214388 [Multi-domain]  Cd Length: 237  Bit Score: 49.24  E-value: 7.20e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  78 TLVTSFIALLIAVPVSFGIALFLTELA-PGwlRRPLGIAIELLAAIPSIVYGMwglfIFAPLFATyfQEPVGNVLSAipf 156
Cdd:CHL00187  60 TLSMALIAALINGFFGLLIAWVLVRYNfPG--KRLLDAAVDLPFALPTSVAGL----TLATVYGD--NGWIGHLLSH--- 128

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 157 vgalfsgpaFGIGIL--AAGVILAIMII--PYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVM 232
Cdd:CHL00187 129 ---------LGIQIVftKLGVLLAMIFVsfPFVVRTIQPVLQEIEKELEEAAWSLGASPWQTFWKVIFPPLIPALLTGLA 199

                        170
                 ....*....|....*....
gi 654550071 233 LGLGRALGETMAVTFIIGN 251
Cdd:CHL00187 200 LTFSRAIGEYGSIVIISSN 218
Mo_ABC_porter TIGR01581
NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively ...
 53-253 1.41e-06

NifC-like ABC-type porter; This model describes a clade of ABC porter genes with relatively weak homology compared to its neighbor clades, the molybdate (TIGR02141) and sulfate (TIGR00969) porters. Neighbor-Joining, PAM-distance phylogenetic trees support the separation of the clades in this way. Included in this group is a gene designated NifC in Clostridium pasturianum. It would be reasonable to presume that NifC acts as a molybdate porter since the most common form of nitrogenase is a molybdoenzyme. Several other sequences falling within the scope of this model are annotated as molybdate porters and one, from Halobacterium, is annotated as a sulfate porter. There is presently no experimental evidence to support annotations with this degree of specificity.


Pssm-ID: 130643  Cd Length: 225  Bit Score: 48.55  E-value: 1.41e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071   53 GFSFLWTKEWDaPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFltelaPGWLRRPLGIAIELLAAIPSIVYGMWGL 132
Cdd:TIGR01581   6 GGSHILSALTD-PENIKALRLSLATSLASLLLAVIIGIPTAYVLARV-----RFPLKKLLDTLLDLPMVLPPLVAGLALL 79

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  133 FIFAPLfatyfqEPVGNVLSAIpfvgalfsgpafGIGIL--AAGVILAIMII--PYIAAVMRDVFEQTPVMMKESAYGIG 208
Cdd:TIGR01581  80 LLFGRN------GLLGPYLEAA------------GIQVIfsTLGVVLAQTFVasPYYVRVARSTFKSVDPRYEDVARSLG 141

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*
gi 654550071  209 CTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMAVTFIIGNTY 253
Cdd:TIGR01581 142 AGPLETFRKITLPMARPGLLAGLVLAWARALGEFGATLMFAGSIQ 186
PRK10971 PRK10971
sulfate/thiosulfate ABC transporter permease CysT;
171-251 5.76e-06

sulfate/thiosulfate ABC transporter permease CysT;


Pssm-ID: 182873  Cd Length: 277  Bit Score: 47.06  E-value: 5.76e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 171 LAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMAVTFIIG 250
Cdd:PRK10971 141 LGIAVAMAFTSIPFVVRTVQPVLEELGPEYEEAAETLGATRWQSFRKVVLPELSPALLAGVALSFTRSLGEFGAVIFIAG 220


                 .
gi 654550071 251 N 251
Cdd:PRK10971 221 N 221
BPD_transp_1 pfam00528
Binding-protein-dependent transport system inner membrane component; The alignments cover the ...
 154-252 4.02e-05

Binding-protein-dependent transport system inner membrane component; The alignments cover the most conserved region of the proteins, which is thought to be located in a cytoplasmic loop between two transmembrane domains. The members of this family have a variable number of transmembrane helices.


Pssm-ID: 334128 [Multi-domain]  Cd Length: 183  Bit Score: 43.44  E-value: 4.02e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  154 IPFVGALFSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVML 233
Cdd:pfam00528  36 AILLVVIAILSILGHGILPAIILALLGWAGYARLIRRAALRSLPSDLVEAARALGASRWQIFRKIILPNALPPILTGLAL 115

                          90
                  ....*....|....*....
gi 654550071  234 GLGRALGETMAVTFIIGNT 252
Cdd:pfam00528 116 AFGGALGGAVLLEFLGSWP 134
PotB COG1176
ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport ...
 79-317 9.44e-05

ABC-type spermidine/putrescine transport system, permease component I [Amino acid transport and metabolism];


Pssm-ID: 440789 [Multi-domain]  Cd Length: 287  Bit Score: 43.21  E-value: 9.44e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  79 LVTSFIALLIAVPVSFGIALfltelAPGWLRRPLGIAIELLAAIPSIV--YGMwgLFIFAPlfatyfQEPVGNVLSAIPF 156
Cdd:COG1176   77 LLTTLICLLLGYPIAYFLAR-----APPRWRNLLLLLVILPFWTSFLVrtYAW--IVLLGR------NGLLNSLLLALGL 143

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 157 VGA----LFSGPAFGIGILAagVILAIMIIPYIAAvmrdvFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVM 232
Cdd:COG1176  144 IDEplrlLYTEFAVVIGLVY--VYLPFMVLPLYAA-----LEKIDPSLLEAARDLGASPWQTFRRVILPLSLPGIIAGSL 216

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 233 LGLGRALGEtMAVTFIIGNTYQLdsaslfmpgnSITSALANEFAEAeSGLHVAALMelGLILFVITFIVLAISKLMIMRL 312
Cdd:COG1176  217 LVFIPALGA-FVTPALLGGGKVL----------MIGNLIYQQFLSA-LNWPLAAAL--AVVLLLIVLLVLLLYLRLLRRR 282


                 ....*
gi 654550071 313 AKNEG 317
Cdd:COG1176  283 RLLGG 287
FbpB COG1178
ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];
79-311 2.81e-04

ABC-type Fe3+ transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440791 [Multi-domain]  Cd Length: 538  Bit Score: 42.46  E-value: 2.81e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  79 LVTSFIALLIAVPVSFgiALFLTELapgWLRRPLGIAIELLAAIPSIV--YGMWGLFIFAPLFATYFQEPVGNVLSAIpf 156
Cdd:COG1178   64 LLVTLLSLLLGVPLAW--LLARTDF---PGRRLLRWLLLLPLALPPYVvaLAWIALFGPNGLLNTLLRALFGLEPPDI-- 136

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 157 vgalfsgpafgIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLG 236
Cdd:COG1178  137 -----------YGLGGIILVLVLFNYPYVYLLLRAALRSIDASLEEAARSLGASPWRAFRRVTLPLLRPAIAAGALLVFL 205

                        170       180       190       200       210       220       230
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 654550071 237 RALGEtMAVTFIIGNTYQldsaslfmpgnSITSALANEFAeAESGLHVAALmeLGLILFVITFIVLAISKLMIMR 311
Cdd:COG1178  206 LCLAD-FGTPLVLGGGYT-----------TLTTAIYQAWL-GDFDLGAAAA--LALVLLLLVLLLLLLERRLRRR 265
modB PRK09421
molybdate ABC transporter permease subunit;
178-318 3.55e-04

molybdate ABC transporter permease subunit;


Pssm-ID: 181841  Cd Length: 229  Bit Score: 41.06  E-value: 3.55e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 178 AIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGRALGETMA-VTF---IIGNTY 253
Cdd:PRK09421 100 AVMAFPLMVRAIRLSLEAVDRKLEQAARTLGASPWRVFFTITLPLTLPGIIAGTVLAFARSLGEFGAtITFvsnIPGETQ 179

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 654550071 254 QLDSAslfmpgnsITSALANEFAEAESglhvaalMELGLILFVITFIVLAISKLMIMRLAKNEGA 318
Cdd:PRK09421 180 TIPSA--------MYTLIQTPGGESAA-------ARLCIISIAIALASLLLSEWLARRSRKRLGA 229
TauC COG0600
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion ...
 78-239 1.05e-03

ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism];


Pssm-ID: 440365 [Multi-domain]  Cd Length: 254  Bit Score: 40.13  E-value: 1.05e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  78 TLVTSFIALLIAVPVSFGIALFLTELApgWLRRPLGIAIELLAAIPSIVygmwglfiFAPLFATYFqepvgnvlsaipfv 157
Cdd:COG0600   66 SLLRVLLGFALAALLGVPLGLLLGLSR--LLRRLLDPLLVFLRPIPPLA--------LAPLLILWF-------------- 121

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071 158 galfsgpafGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLPFTKNGVIGGVMLGLGR 237
Cdd:COG0600  122 ---------GIGEASKIFVIFLGAFFPILLNTAAGVRSVDPELLELARSLGASRWQILRKVVLPAALPYIFTGLRIALGL 192


                 ..
gi 654550071 238 AL 239
Cdd:COG0600  193 AW 194
HisM COG0765
ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]; ...
 78-221 1.54e-03

ABC-type amino acid transport system, permease component [Amino acid transport and metabolism];


Pssm-ID: 440528 [Multi-domain]  Cd Length: 218  Bit Score: 39.29  E-value: 1.54e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654550071  78 TLVTSFIALLIAVPVSFGIALFLTeLAPGWLRRPLGIAIELLAAIPSIVYgmwglfifapLFATYFqepvgnvlsAIPFV 157
Cdd:COG0765   22 TLLLTVLAIVLGLVLGLLLALARL-SPNPVLRWLATAYVEFFRGTPLLVQ----------LFFIYF---------GLPLL 81

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....
gi 654550071 158 GalFSGPAFGIGILAagviLAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRIVLP 221
Cdd:COG0765   82 G--IDLSPFVAAVIA----LTLNSAAYLAEIVRAGIQSVPKGQWEAARALGLSRWQTMRRIILP 139
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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