NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|654680510|ref|WP_028139334|]
View 

MULTISPECIES: DUF1674 domain-containing protein [Bradyrhizobium]

Protein Classification

DUF1674 domain-containing protein( domain architecture ID 11475613)

uncharacterized DUF1674 domain-containing protein similar to eukaryotic succinate dehydrogenase (SDH) assembly factor 4, which is essential in the assembly of SDH, a component of the tricarboxylic acid cycle and the mitochondrial electron transport chain

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
COG5508 COG5508
Uncharacterized conserved protein, DUF1674 domain [Function unknown];
8-69 2.93e-17

Uncharacterized conserved protein, DUF1674 domain [Function unknown];


:

Pssm-ID: 444259  Cd Length: 61  Bit Score: 67.67  E-value: 2.93e-17
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 654680510  8 PARKQLTPAAQRALAEAEARRQSAAAQAQEagkaaPKELQGPKGPEPTRYGDWERKGIASDF 69
Cdd:COG5508   5 APAKPLPPAAQRALAEAEARRAAAEADAEL-----PKEIGGRDGPEPTRYGDWEKKGRAIDF 61
 
Name Accession Description Interval E-value
COG5508 COG5508
Uncharacterized conserved protein, DUF1674 domain [Function unknown];
8-69 2.93e-17

Uncharacterized conserved protein, DUF1674 domain [Function unknown];


Pssm-ID: 444259  Cd Length: 61  Bit Score: 67.67  E-value: 2.93e-17
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 654680510  8 PARKQLTPAAQRALAEAEARRQSAAAQAQEagkaaPKELQGPKGPEPTRYGDWERKGIASDF 69
Cdd:COG5508   5 APAKPLPPAAQRALAEAEARRAAAEADAEL-----PKEIGGRDGPEPTRYGDWEKKGRAIDF 61
DUF1674 pfam07896
Protein of unknown function (DUF1674); The members of this family are sequences derived from ...
 43-69 4.93e-11

Protein of unknown function (DUF1674); The members of this family are sequences derived from hypothetical eukaryotic and bacterial proteins. The region in question is approximately 60 residues long.


Pssm-ID: 429724  Cd Length: 50  Bit Score: 51.93  E-value: 4.93e-11
                         10        20
                 ....*....|....*....|....*..
gi 654680510  43 PKELQGPKGPEPTRYGDWERKGIASDF 69
Cdd:pfam07896 24 TGEIGGPKGPEPTRYGDWEYKGRVSDF 50
 
Name Accession Description Interval E-value
COG5508 COG5508
Uncharacterized conserved protein, DUF1674 domain [Function unknown];
8-69 2.93e-17

Uncharacterized conserved protein, DUF1674 domain [Function unknown];


Pssm-ID: 444259  Cd Length: 61  Bit Score: 67.67  E-value: 2.93e-17
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 654680510  8 PARKQLTPAAQRALAEAEARRQSAAAQAQEagkaaPKELQGPKGPEPTRYGDWERKGIASDF 69
Cdd:COG5508   5 APAKPLPPAAQRALAEAEARRAAAEADAEL-----PKEIGGRDGPEPTRYGDWEKKGRAIDF 61
DUF1674 pfam07896
Protein of unknown function (DUF1674); The members of this family are sequences derived from ...
 43-69 4.93e-11

Protein of unknown function (DUF1674); The members of this family are sequences derived from hypothetical eukaryotic and bacterial proteins. The region in question is approximately 60 residues long.


Pssm-ID: 429724  Cd Length: 50  Bit Score: 51.93  E-value: 4.93e-11
                         10        20
                 ....*....|....*....|....*..
gi 654680510  43 PKELQGPKGPEPTRYGDWERKGIASDF 69
Cdd:pfam07896 24 TGEIGGPKGPEPTRYGDWEYKGRVSDF 50
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH