NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|654962027|ref|WP_028411816|]
View 

MULTISPECIES: bacillithiol system redox-active protein YtxJ [Priestia]

Protein Classification

thioredoxin family protein( domain architecture ID 10567221)

thioredoxin family protein similar to Bacillus subtilis bacillithiol system redox-active protein YtxJ

CATH:  3.40.30.10
Gene Ontology:  GO:0015036
PubMed:  10049365|15558583
SCOP:  3000031

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF2847 pfam11009
Protein of unknown function (DUF2847); Some members in this bacterial family of proteins with ...
 2-101 2.24e-47

Protein of unknown function (DUF2847); Some members in this bacterial family of proteins with unknown function are annotated as YtxJ, a putative general stress protein. This cannot be confirmed.


:

Pssm-ID: 431602  Cd Length: 103  Bit Score: 146.92  E-value: 2.24e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962027    2 KKISTVEEFEQVIKENHR--FLFLKHSTTCPISAAGHEAFSAFASSHED-IPSYYLHVQDSRDVSNYIAETYEVKHESPQ 78
Cdd:pfam11009   1 KELTTEEQLEEILEESKTkpVLIFKHSTTCPISAMALGEFERFWEEHEEeVDVYYLDVIEYRPVSNEIAEKFGVKHESPQ 80

                          90       100
                  ....*....|....*....|...
gi 654962027   79 ALLFEDGKVKWHASHWNINEEEL 101
Cdd:pfam11009  81 VLLIKNGEVVWHASHWDITAEAL 103
 
Name Accession Description Interval E-value
DUF2847 pfam11009
Protein of unknown function (DUF2847); Some members in this bacterial family of proteins with ...
 2-101 2.24e-47

Protein of unknown function (DUF2847); Some members in this bacterial family of proteins with unknown function are annotated as YtxJ, a putative general stress protein. This cannot be confirmed.


Pssm-ID: 431602  Cd Length: 103  Bit Score: 146.92  E-value: 2.24e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962027    2 KKISTVEEFEQVIKENHR--FLFLKHSTTCPISAAGHEAFSAFASSHED-IPSYYLHVQDSRDVSNYIAETYEVKHESPQ 78
Cdd:pfam11009   1 KELTTEEQLEEILEESKTkpVLIFKHSTTCPISAMALGEFERFWEEHEEeVDVYYLDVIEYRPVSNEIAEKFGVKHESPQ 80

                          90       100
                  ....*....|....*....|...
gi 654962027   79 ALLFEDGKVKWHASHWNINEEEL 101
Cdd:pfam11009  81 VLLIKNGEVVWHASHWDITAEAL 103
B_thiol_YtxJ TIGR04019
bacillithiol system protein YtxJ; Members of this protein family, including YtxJ from Bacillus ...
 2-103 1.63e-43

bacillithiol system protein YtxJ; Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018), is described as thioredoxin reductase-like. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 274921  Cd Length: 105  Bit Score: 137.31  E-value: 1.63e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962027    2 KKISTVEEFEQVIKENHR--FLFLKHSTTCPISAAGHEAFSAFAS-SHEDIPSYYLHVQDSRDVSNYIAETYEVKHESPQ 78
Cdd:TIGR04019   1 KKLTTEEQLDEIKEESKEkpVLIFKHSTTCPISAMALREFERFADeSPEQVPVYYLDLIEYRPVSNEIAETFGVKHESPQ 80

                          90       100
                  ....*....|....*....|....*
gi 654962027   79 ALLFEDGKVKWHASHWNINEEELAK 103
Cdd:TIGR04019  81 VIVIKNGEVVWHASHWDITADALKE 105
 
Name Accession Description Interval E-value
DUF2847 pfam11009
Protein of unknown function (DUF2847); Some members in this bacterial family of proteins with ...
 2-101 2.24e-47

Protein of unknown function (DUF2847); Some members in this bacterial family of proteins with unknown function are annotated as YtxJ, a putative general stress protein. This cannot be confirmed.


Pssm-ID: 431602  Cd Length: 103  Bit Score: 146.92  E-value: 2.24e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962027    2 KKISTVEEFEQVIKENHR--FLFLKHSTTCPISAAGHEAFSAFASSHED-IPSYYLHVQDSRDVSNYIAETYEVKHESPQ 78
Cdd:pfam11009   1 KELTTEEQLEEILEESKTkpVLIFKHSTTCPISAMALGEFERFWEEHEEeVDVYYLDVIEYRPVSNEIAEKFGVKHESPQ 80

                          90       100
                  ....*....|....*....|...
gi 654962027   79 ALLFEDGKVKWHASHWNINEEEL 101
Cdd:pfam11009  81 VLLIKNGEVVWHASHWDITAEAL 103
B_thiol_YtxJ TIGR04019
bacillithiol system protein YtxJ; Members of this protein family, including YtxJ from Bacillus ...
 2-103 1.63e-43

bacillithiol system protein YtxJ; Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018), is described as thioredoxin reductase-like. [Unknown function, Enzymes of unknown specificity]


Pssm-ID: 274921  Cd Length: 105  Bit Score: 137.31  E-value: 1.63e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962027    2 KKISTVEEFEQVIKENHR--FLFLKHSTTCPISAAGHEAFSAFAS-SHEDIPSYYLHVQDSRDVSNYIAETYEVKHESPQ 78
Cdd:TIGR04019   1 KKLTTEEQLDEIKEESKEkpVLIFKHSTTCPISAMALREFERFADeSPEQVPVYYLDLIEYRPVSNEIAETFGVKHESPQ 80

                          90       100
                  ....*....|....*....|....*
gi 654962027   79 ALLFEDGKVKWHASHWNINEEELAK 103
Cdd:TIGR04019  81 VIVIKNGEVVWHASHWDITADALKE 105
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH