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Conserved domains on  [gi|654962055|ref|WP_028411844|]
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MULTISPECIES: tetraprenyl-beta-curcumene synthase family protein [Priestia]

Protein Classification

tetraprenyl-beta-curcumene synthase family protein( domain architecture ID 11188280)

tetraprenyl-beta-curcumene synthase family protein such as Bacillus subtilis tetraprenyl-beta-curcumene synthase which catalyzes the transformation of a linear C35 prenyldiphosphate chain to form tetraprenyl-beta-curcumene

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF2600 pfam10776
Protein of unknown function (DUF2600); This is a bacterial family of proteins. Some members in ...
 20-348 0e+00

Protein of unknown function (DUF2600); This is a bacterial family of proteins. Some members in the family are annotated as YtpB however currently no function is known.


:

Pssm-ID: 431489  Cd Length: 328  Bit Score: 557.55  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962055   20 PVVHHELNHWRERAKEIPNKELRTQALASIDTKTFHCEGGGILSILAKENMIECVKFIVAYQTISDYLDNLCDRSNSLDP 99
Cdd:pfam10776   1 PLVHRELQRWRQRAEAIPDPELRKQALASIETKTFHCEGGSIYALLPGDRRKELIRFIVAYQTISDYLDNLCDRSTSLDP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962055  100 KDFAALHESMPDALTPHAPLGDYYRFRTDKDDGGYLAELVQTCQQSLRKACNYHIVSSHLLELATYYCDLQIHKHVEIKE 179
Cdd:pfam10776  81 ADFRQLHQAMLDALTPGAELSDYYRYRPEQDDGGYLAALVRTCQEVLSKLPSYELVRPYLLELARLYSDLQVYKHVPPEE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962055  180 RVPRLENWFDAHRHSVPEMEWYEFSACSGSTLGIFCLAAYSFQEEMTKEMTEKIKAGYFPYIQGLHILLDYLIDQEEDKA 259
Cdd:pfam10776 161 REPRLKAWFERHRDRYPELSWYEFAAATGSTLGIFALFALATDPDLTEEDAEKIKAAYFPWICGLHILLDYFIDQEEDRA 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962055  260 GGDLNFCFYYPHYQQMMDRFLHFVVKADEYAKKLPDYHFHCFIYKGLLGVYLSDQKVRaQKHVHVNARRLIKAGGALSYF 339
Cdd:pfam10776 241 GGDLNFCFYYPDEEEMLERLKYFVEEALEAVARLPDPKFHRLIVRGLLALYLSDPKVR-QPELRPLAKRLIKTGGLPALF 319


                  ....*....
gi 654962055  340 FYINGRLYR 348
Cdd:pfam10776 320 FYLNCRLIR 328
 
Name Accession Description Interval E-value
DUF2600 pfam10776
Protein of unknown function (DUF2600); This is a bacterial family of proteins. Some members in ...
 20-348 0e+00

Protein of unknown function (DUF2600); This is a bacterial family of proteins. Some members in the family are annotated as YtpB however currently no function is known.


Pssm-ID: 431489  Cd Length: 328  Bit Score: 557.55  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962055   20 PVVHHELNHWRERAKEIPNKELRTQALASIDTKTFHCEGGGILSILAKENMIECVKFIVAYQTISDYLDNLCDRSNSLDP 99
Cdd:pfam10776   1 PLVHRELQRWRQRAEAIPDPELRKQALASIETKTFHCEGGSIYALLPGDRRKELIRFIVAYQTISDYLDNLCDRSTSLDP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962055  100 KDFAALHESMPDALTPHAPLGDYYRFRTDKDDGGYLAELVQTCQQSLRKACNYHIVSSHLLELATYYCDLQIHKHVEIKE 179
Cdd:pfam10776  81 ADFRQLHQAMLDALTPGAELSDYYRYRPEQDDGGYLAALVRTCQEVLSKLPSYELVRPYLLELARLYSDLQVYKHVPPEE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962055  180 RVPRLENWFDAHRHSVPEMEWYEFSACSGSTLGIFCLAAYSFQEEMTKEMTEKIKAGYFPYIQGLHILLDYLIDQEEDKA 259
Cdd:pfam10776 161 REPRLKAWFERHRDRYPELSWYEFAAATGSTLGIFALFALATDPDLTEEDAEKIKAAYFPWICGLHILLDYFIDQEEDRA 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962055  260 GGDLNFCFYYPHYQQMMDRFLHFVVKADEYAKKLPDYHFHCFIYKGLLGVYLSDQKVRaQKHVHVNARRLIKAGGALSYF 339
Cdd:pfam10776 241 GGDLNFCFYYPDEEEMLERLKYFVEEALEAVARLPDPKFHRLIVRGLLALYLSDPKVR-QPELRPLAKRLIKTGGLPALF 319


                  ....*....
gi 654962055  340 FYINGRLYR 348
Cdd:pfam10776 320 FYLNCRLIR 328
 
Name Accession Description Interval E-value
DUF2600 pfam10776
Protein of unknown function (DUF2600); This is a bacterial family of proteins. Some members in ...
 20-348 0e+00

Protein of unknown function (DUF2600); This is a bacterial family of proteins. Some members in the family are annotated as YtpB however currently no function is known.


Pssm-ID: 431489  Cd Length: 328  Bit Score: 557.55  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962055   20 PVVHHELNHWRERAKEIPNKELRTQALASIDTKTFHCEGGGILSILAKENMIECVKFIVAYQTISDYLDNLCDRSNSLDP 99
Cdd:pfam10776   1 PLVHRELQRWRQRAEAIPDPELRKQALASIETKTFHCEGGSIYALLPGDRRKELIRFIVAYQTISDYLDNLCDRSTSLDP 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962055  100 KDFAALHESMPDALTPHAPLGDYYRFRTDKDDGGYLAELVQTCQQSLRKACNYHIVSSHLLELATYYCDLQIHKHVEIKE 179
Cdd:pfam10776  81 ADFRQLHQAMLDALTPGAELSDYYRYRPEQDDGGYLAALVRTCQEVLSKLPSYELVRPYLLELARLYSDLQVYKHVPPEE 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962055  180 RVPRLENWFDAHRHSVPEMEWYEFSACSGSTLGIFCLAAYSFQEEMTKEMTEKIKAGYFPYIQGLHILLDYLIDQEEDKA 259
Cdd:pfam10776 161 REPRLKAWFERHRDRYPELSWYEFAAATGSTLGIFALFALATDPDLTEEDAEKIKAAYFPWICGLHILLDYFIDQEEDRA 240

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 654962055  260 GGDLNFCFYYPHYQQMMDRFLHFVVKADEYAKKLPDYHFHCFIYKGLLGVYLSDQKVRaQKHVHVNARRLIKAGGALSYF 339
Cdd:pfam10776 241 GGDLNFCFYYPDEEEMLERLKYFVEEALEAVARLPDPKFHRLIVRGLLALYLSDPKVR-QPELRPLAKRLIKTGGLPALF 319


                  ....*....
gi 654962055  340 FYINGRLYR 348
Cdd:pfam10776 320 FYLNCRLIR 328
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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