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Conserved domains on  [gi|655373962|ref|WP_028779496|]
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MULTISPECIES: STAS/SEC14 domain-containing protein [Shewanella]

Protein Classification

STAS/SEC14 domain-containing protein( domain architecture ID 10571761)

uncharacterized protein containing a STAS/SEC14-like domain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SpoIIAA-like pfam11964
SpoIIAA-like; These proteins adopt an alpha/beta SpoIIAA-like fold, similar to that found in ...
 22-126 1.39e-26

SpoIIAA-like; These proteins adopt an alpha/beta SpoIIAA-like fold, similar to that found in STAT (pfam01740). They adopt open and closed conformations arising from different arrangements of their alpha-2 and alpha-3 helices. They may be membrane associated and may function as carriers of non-polar compounds.


:

Pssm-ID: 432224  Cd Length: 105  Bit Score: 95.17  E-value: 1.39e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 655373962   22 VTMKAVGKLTHEDYEYMVPMLESAIAgvKDPDIYALLDVTEMDGWEARAMWDDLKLGIKHGRHFEKIAIIGNTSLQEWMT 101
Cdd:pfam11964   1 IAVEVSGKLTEEDYRELIPLLEEALA--GHGKIRLLVDLREFFGGSLEAAWEDLKFGLKHLKDFERVAVVGDSKWIRVLA 78

                          90       100
                  ....*....|....*....|....*..
gi 655373962  102 KMADWFTPGDMKFFV--DRLDAIDWLK 126
Cdd:pfam11964  79 LLAGLLTPAEVKYFDleEEEEARAWLA 105
 
Name Accession Description Interval E-value
SpoIIAA-like pfam11964
SpoIIAA-like; These proteins adopt an alpha/beta SpoIIAA-like fold, similar to that found in ...
 22-126 1.39e-26

SpoIIAA-like; These proteins adopt an alpha/beta SpoIIAA-like fold, similar to that found in STAT (pfam01740). They adopt open and closed conformations arising from different arrangements of their alpha-2 and alpha-3 helices. They may be membrane associated and may function as carriers of non-polar compounds.


Pssm-ID: 432224  Cd Length: 105  Bit Score: 95.17  E-value: 1.39e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 655373962   22 VTMKAVGKLTHEDYEYMVPMLESAIAgvKDPDIYALLDVTEMDGWEARAMWDDLKLGIKHGRHFEKIAIIGNTSLQEWMT 101
Cdd:pfam11964   1 IAVEVSGKLTEEDYRELIPLLEEALA--GHGKIRLLVDLREFFGGSLEAAWEDLKFGLKHLKDFERVAVVGDSKWIRVLA 78

                          90       100
                  ....*....|....*....|....*..
gi 655373962  102 KMADWFTPGDMKFFV--DRLDAIDWLK 126
Cdd:pfam11964  79 LLAGLLTPAEVKYFDleEEEEARAWLA 105
 
Name Accession Description Interval E-value
SpoIIAA-like pfam11964
SpoIIAA-like; These proteins adopt an alpha/beta SpoIIAA-like fold, similar to that found in ...
 22-126 1.39e-26

SpoIIAA-like; These proteins adopt an alpha/beta SpoIIAA-like fold, similar to that found in STAT (pfam01740). They adopt open and closed conformations arising from different arrangements of their alpha-2 and alpha-3 helices. They may be membrane associated and may function as carriers of non-polar compounds.


Pssm-ID: 432224  Cd Length: 105  Bit Score: 95.17  E-value: 1.39e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 655373962   22 VTMKAVGKLTHEDYEYMVPMLESAIAgvKDPDIYALLDVTEMDGWEARAMWDDLKLGIKHGRHFEKIAIIGNTSLQEWMT 101
Cdd:pfam11964   1 IAVEVSGKLTEEDYRELIPLLEEALA--GHGKIRLLVDLREFFGGSLEAAWEDLKFGLKHLKDFERVAVVGDSKWIRVLA 78

                          90       100
                  ....*....|....*....|....*..
gi 655373962  102 KMADWFTPGDMKFFV--DRLDAIDWLK 126
Cdd:pfam11964  79 LLAGLLTPAEVKYFDleEEEEARAWLA 105
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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