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Conserved domains on  [gi|657873787|ref|WP_029578345|]
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MOSC N-terminal beta barrel domain-containing protein [Bordetella hinzii]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
MOSC_N super family cl37522
MOSC N-terminal beta barrel domain; This domain is found to the N-terminus of pfam03473. The ...
 24-110 1.06e-08

MOSC N-terminal beta barrel domain; This domain is found to the N-terminus of pfam03473. The function of this domain is unknown, however it is predicted to adopt a beta barrel fold.


The actual alignment was detected with superfamily member pfam03476:

Pssm-ID: 281474  Cd Length: 118  Bit Score: 49.67  E-value: 1.06e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 657873787   24 RRWLVSNDAGQWLTPELCPGLAQVSVELRL-GYLVLRAPGMLRLDIPLdviEDDDSVRYQILIGGQAVDVVDEGELAAAW 102
Cdd:pfam03476  34 RRFMVVDSDGKFVTARREPRLVLIRTTLDEdGGLTLTAPGMPDLSVPL---ADNKFDLRGVLVWGLSFSGRDCGDAAADW 110


                  ....*...
gi 657873787  103 MSNHLGIP 110
Cdd:pfam03476 111 FSDFLGKP 118
 
Name Accession Description Interval E-value
MOSC_N pfam03476
MOSC N-terminal beta barrel domain; This domain is found to the N-terminus of pfam03473. The ...
 24-110 1.06e-08

MOSC N-terminal beta barrel domain; This domain is found to the N-terminus of pfam03473. The function of this domain is unknown, however it is predicted to adopt a beta barrel fold.


Pssm-ID: 281474  Cd Length: 118  Bit Score: 49.67  E-value: 1.06e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 657873787   24 RRWLVSNDAGQWLTPELCPGLAQVSVELRL-GYLVLRAPGMLRLDIPLdviEDDDSVRYQILIGGQAVDVVDEGELAAAW 102
Cdd:pfam03476  34 RRFMVVDSDGKFVTARREPRLVLIRTTLDEdGGLTLTAPGMPDLSVPL---ADNKFDLRGVLVWGLSFSGRDCGDAAADW 110


                  ....*...
gi 657873787  103 MSNHLGIP 110
Cdd:pfam03476 111 FSDFLGKP 118
PLN02724 PLN02724
Molybdenum cofactor sulfurase
 22-118 3.47e-07

Molybdenum cofactor sulfurase


Pssm-ID: 215384 [Multi-domain]  Cd Length: 805  Bit Score: 47.56  E-value: 3.47e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 657873787  22 YQRRWLVSNDAGQWLT----PELCpgLAQVSVELRLGYLVLRAPGMLR-LDIPLdviEDD--DSVRYQILIGGQAVDVVD 94
Cdd:PLN02724 548 YDREWMIQSLTGEILTqkkvPEMC--LITTFIDLESGKLVVRAPRCDHkLEIPL---ESDsqHEESGEVILCGNRAESMS 622

                         90       100
                 ....*....|....*....|....
gi 657873787  95 EGELAAAWMSNHLGIPARLLKVHP 118
Cdd:PLN02724 623 YGTEINEWFTNALGRRCTLVRKSS 646
 
Name Accession Description Interval E-value
MOSC_N pfam03476
MOSC N-terminal beta barrel domain; This domain is found to the N-terminus of pfam03473. The ...
 24-110 1.06e-08

MOSC N-terminal beta barrel domain; This domain is found to the N-terminus of pfam03473. The function of this domain is unknown, however it is predicted to adopt a beta barrel fold.


Pssm-ID: 281474  Cd Length: 118  Bit Score: 49.67  E-value: 1.06e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 657873787   24 RRWLVSNDAGQWLTPELCPGLAQVSVELRL-GYLVLRAPGMLRLDIPLdviEDDDSVRYQILIGGQAVDVVDEGELAAAW 102
Cdd:pfam03476  34 RRFMVVDSDGKFVTARREPRLVLIRTTLDEdGGLTLTAPGMPDLSVPL---ADNKFDLRGVLVWGLSFSGRDCGDAAADW 110


                  ....*...
gi 657873787  103 MSNHLGIP 110
Cdd:pfam03476 111 FSDFLGKP 118
PLN02724 PLN02724
Molybdenum cofactor sulfurase
 22-118 3.47e-07

Molybdenum cofactor sulfurase


Pssm-ID: 215384 [Multi-domain]  Cd Length: 805  Bit Score: 47.56  E-value: 3.47e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 657873787  22 YQRRWLVSNDAGQWLT----PELCpgLAQVSVELRLGYLVLRAPGMLR-LDIPLdviEDD--DSVRYQILIGGQAVDVVD 94
Cdd:PLN02724 548 YDREWMIQSLTGEILTqkkvPEMC--LITTFIDLESGKLVVRAPRCDHkLEIPL---ESDsqHEESGEVILCGNRAESMS 622

                         90       100
                 ....*....|....*....|....
gi 657873787  95 EGELAAAWMSNHLGIPARLLKVHP 118
Cdd:PLN02724 623 YGTEINEWFTNALGRRCTLVRKSS 646
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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