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Conserved domains on  [gi|658546798|ref|WP_029739325|]
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MULTISPECIES: DUF1427 family protein [Enterobacter]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF1427 super family cl01771
Protein of unknown function (DUF1427); This family consists of several bacterial proteins of ...
 5-55 1.93e-16

Protein of unknown function (DUF1427); This family consists of several bacterial proteins of around 100 residues in length. The function of this family is unknown.


The actual alignment was detected with superfamily member pfam07235:

Pssm-ID: 470337  Cd Length: 84  Bit Score: 66.48  E-value: 1.93e-16
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 658546798   5 LISLAAGVLIGLMYAVLKVRSPAPPALALIGLLGMLAGEQA---TRHLLSRDGA 55
Cdd:pfam07235  4 LLSLGAGLLVGVIYSLLNVRSPAPPVIALVGLLGILVGEQVvpvAKRLLAGEPV 57
 
Name Accession Description Interval E-value
DUF1427 pfam07235
Protein of unknown function (DUF1427); This family consists of several bacterial proteins of ...
 5-55 1.93e-16

Protein of unknown function (DUF1427); This family consists of several bacterial proteins of around 100 residues in length. The function of this family is unknown.


Pssm-ID: 399901  Cd Length: 84  Bit Score: 66.48  E-value: 1.93e-16
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 658546798   5 LISLAAGVLIGLMYAVLKVRSPAPPALALIGLLGMLAGEQA---TRHLLSRDGA 55
Cdd:pfam07235  4 LLSLGAGLLVGVIYSLLNVRSPAPPVIALVGLLGILVGEQVvpvAKRLLAGEPV 57
XapX COG4317
Xanthosine utilization system component, XapX domain [Nucleotide transport and metabolism];
1-45 4.73e-12

Xanthosine utilization system component, XapX domain [Nucleotide transport and metabolism];


Pssm-ID: 443458  Cd Length: 53  Bit Score: 54.41  E-value: 4.73e-12
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*.
gi 658546798  1 MSTGLISLAAGVLIGLMYAVLKVRSPAPPALA-LIGLLGMLAGEQA 45
Cdd:COG4317   1 MKEYLLSLLAGLLVGVLFSLLKVPSPAPPVLAgLVGILGILLGEQL 46
XapX TIGR03510
XapX domain; This model describes an uncharacterized small, hydrophobic protein of about 50 ...
 5-45 2.77e-09

XapX domain; This model describes an uncharacterized small, hydrophobic protein of about 50 amino acids, found between the xapB and xapR genes of the E. coli xanthosine utilization system, and homologous regions in other small proteins, such as the N-terminal region of DUF1427 (pfam07235). We name this domain XapX, as it comprises the full length of the protein encoded between the genes for the well-studied XapB and XapR proteins. [Unknown function, General]


Pssm-ID: 274620  Cd Length: 49  Bit Score: 47.53  E-value: 2.77e-09
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 658546798   5 LISLAAGVLIGLMYAVLKVRSPAPPALA-LIGLLGMLAGEQA 45
Cdd:TIGR03510  3 LLSLLAGLLVGALYSLLDVPSPAPPVLAgLVGLLGMLLGEQA 44
 
Name Accession Description Interval E-value
DUF1427 pfam07235
Protein of unknown function (DUF1427); This family consists of several bacterial proteins of ...
 5-55 1.93e-16

Protein of unknown function (DUF1427); This family consists of several bacterial proteins of around 100 residues in length. The function of this family is unknown.


Pssm-ID: 399901  Cd Length: 84  Bit Score: 66.48  E-value: 1.93e-16
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
gi 658546798   5 LISLAAGVLIGLMYAVLKVRSPAPPALALIGLLGMLAGEQA---TRHLLSRDGA 55
Cdd:pfam07235  4 LLSLGAGLLVGVIYSLLNVRSPAPPVIALVGLLGILVGEQVvpvAKRLLAGEPV 57
XapX COG4317
Xanthosine utilization system component, XapX domain [Nucleotide transport and metabolism];
1-45 4.73e-12

Xanthosine utilization system component, XapX domain [Nucleotide transport and metabolism];


Pssm-ID: 443458  Cd Length: 53  Bit Score: 54.41  E-value: 4.73e-12
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....*.
gi 658546798  1 MSTGLISLAAGVLIGLMYAVLKVRSPAPPALA-LIGLLGMLAGEQA 45
Cdd:COG4317   1 MKEYLLSLLAGLLVGVLFSLLKVPSPAPPVLAgLVGILGILLGEQL 46
XapX TIGR03510
XapX domain; This model describes an uncharacterized small, hydrophobic protein of about 50 ...
 5-45 2.77e-09

XapX domain; This model describes an uncharacterized small, hydrophobic protein of about 50 amino acids, found between the xapB and xapR genes of the E. coli xanthosine utilization system, and homologous regions in other small proteins, such as the N-terminal region of DUF1427 (pfam07235). We name this domain XapX, as it comprises the full length of the protein encoded between the genes for the well-studied XapB and XapR proteins. [Unknown function, General]


Pssm-ID: 274620  Cd Length: 49  Bit Score: 47.53  E-value: 2.77e-09
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|..
gi 658546798   5 LISLAAGVLIGLMYAVLKVRSPAPPALA-LIGLLGMLAGEQA 45
Cdd:TIGR03510  3 LLSLLAGLLVGALYSLLDVPSPAPPVLAgLVGLLGMLLGEQA 44
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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